BLASTX nr result
ID: Papaver30_contig00006636
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Papaver30_contig00006636
(1345 letters)
Database: ./nr
77,306,371 sequences; 28,104,191,420 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_010252826.1| PREDICTED: ribonuclease E/G-like protein, ch... 327 2e-98
ref|XP_010252827.1| PREDICTED: ribonuclease E/G-like protein, ch... 325 7e-98
ref|XP_010657493.1| PREDICTED: ribonuclease E/G-like protein, ch... 308 6e-94
ref|XP_010657494.1| PREDICTED: ribonuclease E/G-like protein, ch... 308 6e-94
ref|XP_010657495.1| PREDICTED: ribonuclease E/G-like protein, ch... 308 6e-94
ref|XP_002321206.2| glycoside hydrolase starch-binding domain-co... 275 1e-87
ref|XP_011008080.1| PREDICTED: ribonuclease E/G-like protein, ch... 275 2e-84
ref|XP_008783004.1| PREDICTED: ribonuclease E/G-like protein, ch... 295 9e-84
emb|CBI28473.3| unnamed protein product [Vitis vinifera] 308 7e-81
ref|XP_006469419.1| PREDICTED: ribonuclease E/G-like protein, ch... 267 9e-81
ref|XP_006469420.1| PREDICTED: ribonuclease E/G-like protein, ch... 267 9e-81
ref|XP_006447836.1| hypothetical protein CICLE_v10014166mg [Citr... 267 9e-81
ref|XP_010929029.1| PREDICTED: ribonuclease E/G-like protein, ch... 290 1e-80
ref|XP_002524601.1| hypothetical protein RCOM_1213430 [Ricinus c... 268 3e-80
gb|KHG25631.1| Ribonuclease E [Gossypium arboreum] 276 4e-80
ref|XP_012089614.1| PREDICTED: ribonuclease E/G-like protein, ch... 267 3e-79
ref|XP_012089616.1| PREDICTED: ribonuclease E/G-like protein, ch... 267 3e-79
ref|XP_007049409.1| RNAse E/G-like [Theobroma cacao] gi|50870167... 275 3e-78
ref|XP_010048225.1| PREDICTED: ribonuclease E/G-like protein, ch... 263 1e-75
gb|KCW89039.1| hypothetical protein EUGRSUZ_A01367 [Eucalyptus g... 263 1e-75
>ref|XP_010252826.1| PREDICTED: ribonuclease E/G-like protein, chloroplastic isoform X1
[Nelumbo nucifera]
Length = 1026
Score = 327 bits (839), Expect(2) = 2e-98
Identities = 174/325 (53%), Positives = 218/325 (67%), Gaps = 11/325 (3%)
Frame = -1
Query: 1336 LKSSPTVSARKDTSSQEFCEVLWTVEADLADGQILYVTGDSITLGCWEPVMAIRMVPSSE 1157
L+ P S T+SQE C+VLWT+EADL DG++LY+TGD I LGCWEP MA+ M PSSE
Sbjct: 75 LRKDPGFSGNSATTSQELCKVLWTIEADLEDGELLYITGDPIVLGCWEPEMAVLMSPSSE 134
Query: 1156 RPNLWKTEVKVPCGANFKYNYFIRGDRWPSSDLTWRPGPEFSVSIPLPSTQNRKVVVRDL 977
NLWKTEVKVPCG NFKYNYFIRGD+WPSSDL WRPGPEFS+S+P+ Q ++VRD
Sbjct: 135 HANLWKTEVKVPCGMNFKYNYFIRGDKWPSSDLVWRPGPEFSLSVPVTHNQ---ILVRDS 191
Query: 976 WMEVQIEKVQVHSWGSWIEETNLTADQVIPSPNEGKHRNLRSQKIVRDSSLSPIEF---- 809
W+ ++ +HSWGSWI E L A + S ++ L S K SL EF
Sbjct: 192 WVTARMGIPPMHSWGSWIGEACLPAHSITSSAAGDEYGILESPK---SDSLGRKEFSIDV 248
Query: 808 -VEDEPYSTGRNDLTILSNNNIASGGSLFERDQPVEEPWLLQ---SALSFKDEIDSSSKI 641
EDE +S ++ N SG +RD P+EEPWLLQ +L FK E++SS
Sbjct: 249 TAEDEFHSVEKDCTLNNGVNGSDSGERTSDRDNPIEEPWLLQYSLISLDFKGEVESSMPK 308
Query: 640 QSPEEVLKQQELPNKSYQGAEIPEDTSKLTN---FEDSVSTVILINSSICTMQRIAVMEE 470
+S ++++ Q E P+K+YQ DT+KL +SV+T+ILINSSICTMQRIAV+E+
Sbjct: 309 ESDQDMITQLEFPDKAYQ------DTAKLLGKLACIESVNTIILINSSICTMQRIAVLED 362
Query: 469 GKLVELLLEPVKNNVHCDSVYLGVV 395
GKLVELLLEPVKNNV CD+VYLGV+
Sbjct: 363 GKLVELLLEPVKNNVQCDNVYLGVI 387
Score = 62.0 bits (149), Expect(2) = 2e-98
Identities = 32/71 (45%), Positives = 45/71 (63%), Gaps = 3/71 (4%)
Frame = -3
Query: 392 RPSLMDIKQNREPFIFPPFRRKGKEKEVNGAAIHKHKQHPDIFSSS--SHG-VEVIDDIE 222
RPSLMDIKQNREPF+FPPFR K KEK+ + +++ ++ D S SHG +++ D
Sbjct: 405 RPSLMDIKQNREPFVFPPFRSKTKEKQFDDFVVNELQEEVDAHESEPVSHGDIDLSYDFS 464
Query: 221 GIEFKDDPDQF 189
I+ +D F
Sbjct: 465 EIDLHEDQAHF 475
>ref|XP_010252827.1| PREDICTED: ribonuclease E/G-like protein, chloroplastic isoform X2
[Nelumbo nucifera]
Length = 1021
Score = 325 bits (833), Expect(2) = 7e-98
Identities = 176/328 (53%), Positives = 220/328 (67%), Gaps = 14/328 (4%)
Frame = -1
Query: 1336 LKSSPTVSARKD---TSSQEFCEVLWTVEADLADGQILYVTGDSITLGCWEPVMAIRMVP 1166
L +P S RK T+SQE C+VLWT+EADL DG++LY+TGD I LGCWEP MA+ M P
Sbjct: 67 LMKTPIKSLRKGNSATTSQELCKVLWTIEADLEDGELLYITGDPIVLGCWEPEMAVLMSP 126
Query: 1165 SSERPNLWKTEVKVPCGANFKYNYFIRGDRWPSSDLTWRPGPEFSVSIPLPSTQNRKVVV 986
SSE NLWKTEVKVPCG NFKYNYFIRGD+WPSSDL WRPGPEFS+S+P+ Q ++V
Sbjct: 127 SSEHANLWKTEVKVPCGMNFKYNYFIRGDKWPSSDLVWRPGPEFSLSVPVTHNQ---ILV 183
Query: 985 RDLWMEVQIEKVQVHSWGSWIEETNLTADQVIPSPNEGKHRNLRSQKIVRDSSLSPIEF- 809
RD W+ ++ +HSWGSWI E L A + S ++ L S K SL EF
Sbjct: 184 RDSWVTARMGIPPMHSWGSWIGEACLPAHSITSSAAGDEYGILESPK---SDSLGRKEFS 240
Query: 808 ----VEDEPYSTGRNDLTILSNNNIASGGSLFERDQPVEEPWLLQ---SALSFKDEIDSS 650
EDE +S ++ N SG +RD P+EEPWLLQ +L FK E++SS
Sbjct: 241 IDVTAEDEFHSVEKDCTLNNGVNGSDSGERTSDRDNPIEEPWLLQYSLISLDFKGEVESS 300
Query: 649 SKIQSPEEVLKQQELPNKSYQGAEIPEDTSKLTN---FEDSVSTVILINSSICTMQRIAV 479
+S ++++ Q E P+K+YQ DT+KL +SV+T+ILINSSICTMQRIAV
Sbjct: 301 MPKESDQDMITQLEFPDKAYQ------DTAKLLGKLACIESVNTIILINSSICTMQRIAV 354
Query: 478 MEEGKLVELLLEPVKNNVHCDSVYLGVV 395
+E+GKLVELLLEPVKNNV CD+VYLGV+
Sbjct: 355 LEDGKLVELLLEPVKNNVQCDNVYLGVI 382
Score = 62.0 bits (149), Expect(2) = 7e-98
Identities = 32/71 (45%), Positives = 45/71 (63%), Gaps = 3/71 (4%)
Frame = -3
Query: 392 RPSLMDIKQNREPFIFPPFRRKGKEKEVNGAAIHKHKQHPDIFSSS--SHG-VEVIDDIE 222
RPSLMDIKQNREPF+FPPFR K KEK+ + +++ ++ D S SHG +++ D
Sbjct: 400 RPSLMDIKQNREPFVFPPFRSKTKEKQFDDFVVNELQEEVDAHESEPVSHGDIDLSYDFS 459
Query: 221 GIEFKDDPDQF 189
I+ +D F
Sbjct: 460 EIDLHEDQAHF 470
>ref|XP_010657493.1| PREDICTED: ribonuclease E/G-like protein, chloroplastic isoform X1
[Vitis vinifera]
Length = 1026
Score = 308 bits (789), Expect(2) = 6e-94
Identities = 166/329 (50%), Positives = 223/329 (67%), Gaps = 12/329 (3%)
Frame = -1
Query: 1345 NFLLKSSPTVSARKDTSSQEF---CEVLWTVEADLADGQILYVTGDSITLGCWEPVMAIR 1175
N +LKSS S RK SS F C+V+WT+EADL DGQ+LY+TGD LGCWEP MA+
Sbjct: 65 NSVLKSS-IKSMRKGNSSTAFKGLCKVIWTIEADLEDGQLLYITGDPNVLGCWEPDMAVL 123
Query: 1174 MVPSSERPNLWKTEVKVPCGANFKYNYFIRGDRWPSSDLTWRPGPEFSVSIPLPSTQNRK 995
M P+ E NLWK EVK+ CG NFKYNYF++GD WPS D+ W+PGPEFS+ +PL Q++K
Sbjct: 124 MSPT-EHTNLWKAEVKITCGINFKYNYFLKGDAWPSCDIIWKPGPEFSLLVPLHGKQDKK 182
Query: 994 VVVRDLWMEVQIEKVQVHSWGSWIEETNLTADQVIPSPNEGKHRNLRSQKIVRDSSLSPI 815
++VRD WM + H WGSW+E++ A+ +I P+ + K ++ SLS +
Sbjct: 183 IMVRDSWMTSNARRPSAHIWGSWMEDSYFPAEHLISPPSRDEDE---IAKCLKSDSLSKL 239
Query: 814 EF----VEDEPYSTGRNDLTILSNNNIASGGSLFERDQPVEEPWLLQSAL-SFKDEIDS- 653
VED+ +S + ++ +S + S G++ RDQPVEEPWLLQS+L + K+E+ S
Sbjct: 240 FLDDLSVEDKSFSDNEDTISAMSKG-LDSNGTVSMRDQPVEEPWLLQSSLIASKEEMVSN 298
Query: 652 -SSKIQSPEEVLKQQELPNKSYQGAE--IPEDTSKLTNFEDSVSTVILINSSICTMQRIA 482
S I + + + +L ++SY E +PE+ + L + +DSVSTVILINSSICTMQRIA
Sbjct: 299 MSKNIDAAQVEVSHLKLLDQSYLHTEKLLPEEGTNLISKDDSVSTVILINSSICTMQRIA 358
Query: 481 VMEEGKLVELLLEPVKNNVHCDSVYLGVV 395
V+E+G LVELLLEPVK+NV CDSVYLGVV
Sbjct: 359 VLEDGSLVELLLEPVKSNVQCDSVYLGVV 387
Score = 65.9 bits (159), Expect(2) = 6e-94
Identities = 35/73 (47%), Positives = 51/73 (69%), Gaps = 2/73 (2%)
Frame = -3
Query: 398 SXRPSLMDIKQNREPFIFPPFRRKGKEKEVNGAAIHKHKQHPDIFSS--SSHGVEVIDDI 225
S RPSLMDIK++REPFIFPPF KEK+ NG+ + +++P + +S+ VE DD+
Sbjct: 403 SSRPSLMDIKRSREPFIFPPFHHGTKEKD-NGSVFNTLRENPIAHENEHTSYDVEA-DDL 460
Query: 224 EGIEFKDDPDQFS 186
++F+DDP QF+
Sbjct: 461 REVDFQDDPVQFA 473
>ref|XP_010657494.1| PREDICTED: ribonuclease E/G-like protein, chloroplastic isoform X2
[Vitis vinifera]
Length = 1025
Score = 308 bits (789), Expect(2) = 6e-94
Identities = 166/329 (50%), Positives = 223/329 (67%), Gaps = 12/329 (3%)
Frame = -1
Query: 1345 NFLLKSSPTVSARKDTSSQEF---CEVLWTVEADLADGQILYVTGDSITLGCWEPVMAIR 1175
N +LKSS S RK SS F C+V+WT+EADL DGQ+LY+TGD LGCWEP MA+
Sbjct: 64 NSVLKSS-IKSMRKGNSSTAFKGLCKVIWTIEADLEDGQLLYITGDPNVLGCWEPDMAVL 122
Query: 1174 MVPSSERPNLWKTEVKVPCGANFKYNYFIRGDRWPSSDLTWRPGPEFSVSIPLPSTQNRK 995
M P+ E NLWK EVK+ CG NFKYNYF++GD WPS D+ W+PGPEFS+ +PL Q++K
Sbjct: 123 MSPT-EHTNLWKAEVKITCGINFKYNYFLKGDAWPSCDIIWKPGPEFSLLVPLHGKQDKK 181
Query: 994 VVVRDLWMEVQIEKVQVHSWGSWIEETNLTADQVIPSPNEGKHRNLRSQKIVRDSSLSPI 815
++VRD WM + H WGSW+E++ A+ +I P+ + K ++ SLS +
Sbjct: 182 IMVRDSWMTSNARRPSAHIWGSWMEDSYFPAEHLISPPSRDEDE---IAKCLKSDSLSKL 238
Query: 814 EF----VEDEPYSTGRNDLTILSNNNIASGGSLFERDQPVEEPWLLQSAL-SFKDEIDS- 653
VED+ +S + ++ +S + S G++ RDQPVEEPWLLQS+L + K+E+ S
Sbjct: 239 FLDDLSVEDKSFSDNEDTISAMSKG-LDSNGTVSMRDQPVEEPWLLQSSLIASKEEMVSN 297
Query: 652 -SSKIQSPEEVLKQQELPNKSYQGAE--IPEDTSKLTNFEDSVSTVILINSSICTMQRIA 482
S I + + + +L ++SY E +PE+ + L + +DSVSTVILINSSICTMQRIA
Sbjct: 298 MSKNIDAAQVEVSHLKLLDQSYLHTEKLLPEEGTNLISKDDSVSTVILINSSICTMQRIA 357
Query: 481 VMEEGKLVELLLEPVKNNVHCDSVYLGVV 395
V+E+G LVELLLEPVK+NV CDSVYLGVV
Sbjct: 358 VLEDGSLVELLLEPVKSNVQCDSVYLGVV 386
Score = 65.9 bits (159), Expect(2) = 6e-94
Identities = 35/73 (47%), Positives = 51/73 (69%), Gaps = 2/73 (2%)
Frame = -3
Query: 398 SXRPSLMDIKQNREPFIFPPFRRKGKEKEVNGAAIHKHKQHPDIFSS--SSHGVEVIDDI 225
S RPSLMDIK++REPFIFPPF KEK+ NG+ + +++P + +S+ VE DD+
Sbjct: 402 SSRPSLMDIKRSREPFIFPPFHHGTKEKD-NGSVFNTLRENPIAHENEHTSYDVEA-DDL 459
Query: 224 EGIEFKDDPDQFS 186
++F+DDP QF+
Sbjct: 460 REVDFQDDPVQFA 472
>ref|XP_010657495.1| PREDICTED: ribonuclease E/G-like protein, chloroplastic isoform X3
[Vitis vinifera]
Length = 1020
Score = 308 bits (789), Expect(2) = 6e-94
Identities = 166/329 (50%), Positives = 223/329 (67%), Gaps = 12/329 (3%)
Frame = -1
Query: 1345 NFLLKSSPTVSARKDTSSQEF---CEVLWTVEADLADGQILYVTGDSITLGCWEPVMAIR 1175
N +LKSS S RK SS F C+V+WT+EADL DGQ+LY+TGD LGCWEP MA+
Sbjct: 65 NSVLKSS-IKSMRKGNSSTAFKGLCKVIWTIEADLEDGQLLYITGDPNVLGCWEPDMAVL 123
Query: 1174 MVPSSERPNLWKTEVKVPCGANFKYNYFIRGDRWPSSDLTWRPGPEFSVSIPLPSTQNRK 995
M P+ E NLWK EVK+ CG NFKYNYF++GD WPS D+ W+PGPEFS+ +PL Q++K
Sbjct: 124 MSPT-EHTNLWKAEVKITCGINFKYNYFLKGDAWPSCDIIWKPGPEFSLLVPLHGKQDKK 182
Query: 994 VVVRDLWMEVQIEKVQVHSWGSWIEETNLTADQVIPSPNEGKHRNLRSQKIVRDSSLSPI 815
++VRD WM + H WGSW+E++ A+ +I P+ + K ++ SLS +
Sbjct: 183 IMVRDSWMTSNARRPSAHIWGSWMEDSYFPAEHLISPPSRDEDE---IAKCLKSDSLSKL 239
Query: 814 EF----VEDEPYSTGRNDLTILSNNNIASGGSLFERDQPVEEPWLLQSAL-SFKDEIDS- 653
VED+ +S + ++ +S + S G++ RDQPVEEPWLLQS+L + K+E+ S
Sbjct: 240 FLDDLSVEDKSFSDNEDTISAMSKG-LDSNGTVSMRDQPVEEPWLLQSSLIASKEEMVSN 298
Query: 652 -SSKIQSPEEVLKQQELPNKSYQGAE--IPEDTSKLTNFEDSVSTVILINSSICTMQRIA 482
S I + + + +L ++SY E +PE+ + L + +DSVSTVILINSSICTMQRIA
Sbjct: 299 MSKNIDAAQVEVSHLKLLDQSYLHTEKLLPEEGTNLISKDDSVSTVILINSSICTMQRIA 358
Query: 481 VMEEGKLVELLLEPVKNNVHCDSVYLGVV 395
V+E+G LVELLLEPVK+NV CDSVYLGVV
Sbjct: 359 VLEDGSLVELLLEPVKSNVQCDSVYLGVV 387
Score = 65.9 bits (159), Expect(2) = 6e-94
Identities = 35/73 (47%), Positives = 51/73 (69%), Gaps = 2/73 (2%)
Frame = -3
Query: 398 SXRPSLMDIKQNREPFIFPPFRRKGKEKEVNGAAIHKHKQHPDIFSS--SSHGVEVIDDI 225
S RPSLMDIK++REPFIFPPF KEK+ NG+ + +++P + +S+ VE DD+
Sbjct: 403 SSRPSLMDIKRSREPFIFPPFHHGTKEKD-NGSVFNTLRENPIAHENEHTSYDVEA-DDL 460
Query: 224 EGIEFKDDPDQFS 186
++F+DDP QF+
Sbjct: 461 REVDFQDDPVQFA 473
>ref|XP_002321206.2| glycoside hydrolase starch-binding domain-containing family protein
[Populus trichocarpa] gi|550324362|gb|EEE99521.2|
glycoside hydrolase starch-binding domain-containing
family protein [Populus trichocarpa]
Length = 995
Score = 275 bits (704), Expect(2) = 1e-87
Identities = 156/322 (48%), Positives = 207/322 (64%), Gaps = 14/322 (4%)
Frame = -1
Query: 1318 VSARK-----DTSSQE-FCEVLWTVEADLADGQILYVTGDSITLGCWEPVMAIRMVPSSE 1157
+SA+K +T QE CE++WTVEADLA GQ+LYVTGD + LGCW+P MAI M P S
Sbjct: 58 ISAKKGNYSNNTVCQEGLCELVWTVEADLAPGQLLYVTGDPVVLGCWDPEMAILMHPISH 117
Query: 1156 RPNLWKTEVKVPCGANFKYNYFIRGDRWPSSDLTWRPGPEFSVSIPLPSTQNRKVVVRDL 977
PNLW+ +V VPCG NFKYNYF+R WPS ++TWRPGPEFS+S+P Q+RK++VRD
Sbjct: 118 -PNLWEAQVTVPCGVNFKYNYFVRDKTWPSCNVTWRPGPEFSLSVPATVKQDRKIMVRDS 176
Query: 976 WMEVQIEKVQVHSWGSWIEETNLTADQVIPSPNEGKHRNLRSQKIVRDSSLSPIEFVEDE 797
W + E+ + WGSWIEE L + +P +H + +I P F+ D
Sbjct: 177 WTKFNTERSPDYLWGSWIEERYLPLEPSNCAPTRDEHVIAKHLQI---DFKEPKAFLNDL 233
Query: 796 PYS--TGRNDLTILSNNNIASGGSLFERDQPVEEPWLLQS---ALSFKDEI--DSSSKIQ 638
+ + ND L+ ERDQP+EEPWLLQS ++ FKD++ D S
Sbjct: 234 KVNNKSRTNDEDYLTATYDCPNSVFHERDQPLEEPWLLQSPVISVVFKDKLTQDVSKNSD 293
Query: 637 SPEEVLKQQELPNKSYQGAE-IPEDTSKLTNFEDSVSTVILINSSICTMQRIAVMEEGKL 461
+ E+ LK+ ++ ++ + + + + S L +DSVSTVILI+SSICTMQRIAV+E+ KL
Sbjct: 294 TVEDGLKKFKVNDQGMKVKDKLSANGSNLNLKDDSVSTVILISSSICTMQRIAVLEDEKL 353
Query: 460 VELLLEPVKNNVHCDSVYLGVV 395
VELLLEPVKN V CDSVY+GVV
Sbjct: 354 VELLLEPVKNTVLCDSVYIGVV 375
Score = 77.4 bits (189), Expect(2) = 1e-87
Identities = 45/100 (45%), Positives = 55/100 (55%), Gaps = 7/100 (7%)
Frame = -3
Query: 398 SXRPSLMDIKQNREPFIFPPFRRKGKEKEVNGAAIHKHKQHPDIFSS--SSHGVEVIDDI 225
S RPSLMDIKQNREPFIFPPF ++ K+ EVNG+ + ++HP + +SH VEVIDD+
Sbjct: 391 SSRPSLMDIKQNREPFIFPPFCQRTKKGEVNGSVLKAFEEHPAAHENEHTSHDVEVIDDV 450
Query: 224 EGIEFKDD-----PDQFSXXXXXXXXXXXXXDANVNGSIV 120
F D D NVNGSIV
Sbjct: 451 SEFVFHSDLAPFLHDDHEEHEVDDDFDVSEVKENVNGSIV 490
>ref|XP_011008080.1| PREDICTED: ribonuclease E/G-like protein, chloroplastic isoform X1
[Populus euphratica]
Length = 999
Score = 275 bits (702), Expect(2) = 2e-84
Identities = 153/322 (47%), Positives = 203/322 (63%), Gaps = 14/322 (4%)
Frame = -1
Query: 1318 VSARKDTSS------QEFCEVLWTVEADLADGQILYVTGDSITLGCWEPVMAIRMVPSSE 1157
+SA+K S + CE++WTVEADLA GQ+LYVTGD + LGCW+P MAI M P S
Sbjct: 58 ISAKKGNYSNVTVCQEGLCELVWTVEADLAPGQLLYVTGDPVVLGCWDPEMAILMHPISH 117
Query: 1156 RPNLWKTEVKVPCGANFKYNYFIRGDRWPSSDLTWRPGPEFSVSIPLPSTQNRKVVVRDL 977
PN W+ +V VPCG NFKYNYF+R WPS ++TWRPGPEFS+S+P Q+RK++VRD
Sbjct: 118 -PNFWEAQVTVPCGVNFKYNYFVREKTWPSCNVTWRPGPEFSLSVPATVKQDRKIMVRDS 176
Query: 976 WMEVQIEKVQVHSWGSWIEETNLTADQVIPSPNEGKHRNLRSQKIVRDSSLSPIEFVEDE 797
W + + E+ H WGSWIEE L + +P +H + P F+ D
Sbjct: 177 WTKFKTERSPDHLWGSWIEERYLPLEPSNCAPTRDEHVIAKHLNF-----KEPKAFLNDL 231
Query: 796 PYS--TGRNDLTILSNNNIASGGSLFERDQPVEEPWLLQSALS---FKDEI--DSSSKIQ 638
+ + ND L+ ERDQP+EEPWLLQS ++ FKD++ D S
Sbjct: 232 KVNNKSRNNDEDCLTATYDCPNSVFHERDQPLEEPWLLQSPVNSVVFKDKLTQDVSKNSD 291
Query: 637 SPEEVLKQQELPNKSYQGAE-IPEDTSKLTNFEDSVSTVILINSSICTMQRIAVMEEGKL 461
+ E+ LK+ ++ ++ + + + + S L +DSVSTVILI+SSICTMQRIAV+E+ KL
Sbjct: 292 TVEDGLKKFKVNDQGLKVKDKLSANGSNLNLKDDSVSTVILISSSICTMQRIAVLEDEKL 351
Query: 460 VELLLEPVKNNVHCDSVYLGVV 395
VELLLEPVKN V CDSVY+GVV
Sbjct: 352 VELLLEPVKNTVLCDSVYIGVV 373
Score = 67.8 bits (164), Expect(2) = 2e-84
Identities = 40/98 (40%), Positives = 50/98 (51%), Gaps = 5/98 (5%)
Frame = -3
Query: 398 SXRPSLMDIKQNREPFIFPPFRRKGKEKEVNGAAIHKHKQHPDIFSSSSHGVEVIDDIEG 219
S RPSLMDIKQNREPFIFPPF ++ K+ EVNG+ + ++HP + H +DD+
Sbjct: 389 SSRPSLMDIKQNREPFIFPPFCQRKKKGEVNGSVLKAFEEHP-AAHENEHTSHDVDDVSE 447
Query: 218 IEFKDD-----PDQFSXXXXXXXXXXXXXDANVNGSIV 120
F D D NVNGSIV
Sbjct: 448 FVFHGDLAPFLHDDHEEHEVDDDFDVSEVKENVNGSIV 485
>ref|XP_008783004.1| PREDICTED: ribonuclease E/G-like protein, chloroplastic isoform X1
[Phoenix dactylifera]
Length = 1041
Score = 295 bits (754), Expect(2) = 9e-84
Identities = 154/324 (47%), Positives = 213/324 (65%), Gaps = 10/324 (3%)
Frame = -1
Query: 1336 LKSSPTVSARKDTSS---QEFCEVLWTVEADLADGQILYVTGDSITLGCWEPVMAIRMVP 1166
L SP +S R S+ + C+VLW +EAD+AD ++++TGD +TLGCWEP MAI + P
Sbjct: 78 LSRSPLMSMRNGDSALTCKGLCKVLWNLEADIADDYLIFITGDPVTLGCWEPEMAILLSP 137
Query: 1165 SSERPNLWKTEVKVPCGANFKYNYFIRGDRWPSSDLTWRPGPEFSVSIPLPSTQNRKVVV 986
+E NLWKTE+ VPCG +FKYNYFIR ++ PS DL WRPGPEFS+S+P +N +VV
Sbjct: 138 CTECANLWKTEITVPCGIHFKYNYFIREEKKPSCDLIWRPGPEFSMSVPFVGKENDVIVV 197
Query: 985 RDLWMEVQIEKVQVHSWGSWIEETNLTADQVIPSP----NEGKHRNLRSQK-IVRDSSLS 821
RD WM +I+++ V SWGSW+ + NL + + P+ + G+ LRS + S
Sbjct: 198 RDSWMRTRIQRLPVPSWGSWMVDINLPQNHLKPAHRRALSTGRREILRSHNGVPLQRKQS 257
Query: 820 PIEFVEDEPYSTGRNDLTILSNNNIASGGSLFERDQPVEEPWLLQSALSFKDEIDSSSKI 641
++ + +E Y ++ +N+ +G +L ERDQPVEEPWLLQS L +
Sbjct: 258 SVDCLPEENYKLVEKNV----KSNVGNGKNLSERDQPVEEPWLLQSILVSMMHFVGLDEA 313
Query: 640 QSPEEVLKQQELPNKSYQGAEI--PEDTSKLTNFEDSVSTVILINSSICTMQRIAVMEEG 467
++V K ++ P + + AE+ PED K+ + E+ STVILINSS+CT+QRIAV+E+G
Sbjct: 314 SDQDKVHK-KDFPGR-FSDAEVLAPEDEHKVVHAEEPASTVILINSSVCTVQRIAVLEDG 371
Query: 466 KLVELLLEPVKNNVHCDSVYLGVV 395
KLVELLLEPVKNNV CDS+YLGVV
Sbjct: 372 KLVELLLEPVKNNVQCDSIYLGVV 395
Score = 45.4 bits (106), Expect(2) = 9e-84
Identities = 24/68 (35%), Positives = 39/68 (57%)
Frame = -3
Query: 392 RPSLMDIKQNREPFIFPPFRRKGKEKEVNGAAIHKHKQHPDIFSSSSHGVEVIDDIEGIE 213
RPSLM +K NREPF++PPF + + + VNG++ K + S + + DD + +
Sbjct: 413 RPSLMGMKHNREPFVYPPFDHQVRGESVNGSSKPKEYFDTHVIDRSLYDDDDDDDNDDDD 472
Query: 212 FKDDPDQF 189
+ D D+F
Sbjct: 473 Y-DMTDEF 479
>emb|CBI28473.3| unnamed protein product [Vitis vinifera]
Length = 934
Score = 308 bits (789), Expect = 7e-81
Identities = 166/329 (50%), Positives = 223/329 (67%), Gaps = 12/329 (3%)
Frame = -1
Query: 1345 NFLLKSSPTVSARKDTSSQEF---CEVLWTVEADLADGQILYVTGDSITLGCWEPVMAIR 1175
N +LKSS S RK SS F C+V+WT+EADL DGQ+LY+TGD LGCWEP MA+
Sbjct: 64 NSVLKSS-IKSMRKGNSSTAFKGLCKVIWTIEADLEDGQLLYITGDPNVLGCWEPDMAVL 122
Query: 1174 MVPSSERPNLWKTEVKVPCGANFKYNYFIRGDRWPSSDLTWRPGPEFSVSIPLPSTQNRK 995
M P+ E NLWK EVK+ CG NFKYNYF++GD WPS D+ W+PGPEFS+ +PL Q++K
Sbjct: 123 MSPT-EHTNLWKAEVKITCGINFKYNYFLKGDAWPSCDIIWKPGPEFSLLVPLHGKQDKK 181
Query: 994 VVVRDLWMEVQIEKVQVHSWGSWIEETNLTADQVIPSPNEGKHRNLRSQKIVRDSSLSPI 815
++VRD WM + H WGSW+E++ A+ +I P+ + K ++ SLS +
Sbjct: 182 IMVRDSWMTSNARRPSAHIWGSWMEDSYFPAEHLISPPSRDEDE---IAKCLKSDSLSKL 238
Query: 814 EF----VEDEPYSTGRNDLTILSNNNIASGGSLFERDQPVEEPWLLQSAL-SFKDEIDS- 653
VED+ +S + ++ +S + S G++ RDQPVEEPWLLQS+L + K+E+ S
Sbjct: 239 FLDDLSVEDKSFSDNEDTISAMSKG-LDSNGTVSMRDQPVEEPWLLQSSLIASKEEMVSN 297
Query: 652 -SSKIQSPEEVLKQQELPNKSYQGAE--IPEDTSKLTNFEDSVSTVILINSSICTMQRIA 482
S I + + + +L ++SY E +PE+ + L + +DSVSTVILINSSICTMQRIA
Sbjct: 298 MSKNIDAAQVEVSHLKLLDQSYLHTEKLLPEEGTNLISKDDSVSTVILINSSICTMQRIA 357
Query: 481 VMEEGKLVELLLEPVKNNVHCDSVYLGVV 395
V+E+G LVELLLEPVK+NV CDSVYLGVV
Sbjct: 358 VLEDGSLVELLLEPVKSNVQCDSVYLGVV 386
>ref|XP_006469419.1| PREDICTED: ribonuclease E/G-like protein, chloroplastic-like isoform
X1 [Citrus sinensis]
Length = 1009
Score = 267 bits (683), Expect(2) = 9e-81
Identities = 153/330 (46%), Positives = 205/330 (62%), Gaps = 13/330 (3%)
Frame = -1
Query: 1345 NFLLKSSPTVSARKDTSS---QEFCEVLWTVEADLADGQILYVTGDSITLGCWEPVMAIR 1175
N L+KS P +SA + S+ Q CE++WTVEADL GQ+LY+TGD LGCW+P MAI
Sbjct: 61 NSLIKS-PIMSANRGKSASAIQGLCEIVWTVEADLEAGQLLYITGDPSVLGCWDPDMAIL 119
Query: 1174 MVPSSERPNLWKTEVKVPCGANFKYNYFIRGDRWPSSDLTWRPGPEFSVSIPLPSTQNRK 995
M P+ E NLWK EVK+ CG NFKYN+F++G+ W S D+ WR GPEFS+ +P Q+RK
Sbjct: 120 MSPT-EHENLWKVEVKIACGVNFKYNFFMKGETWSSGDIIWRGGPEFSLLVPF--NQDRK 176
Query: 994 VVVRDLWMEVQIEKVQVHSWGSWIEETNLTADQVIPSPNEGKH--RNLRSQKIVRDSSLS 821
++VRD WM + H W SWIEET + I P ++L S + +
Sbjct: 177 ILVRDSWMRFNTKNSPTHIWDSWIEETYIPVKSPISVPETDDEIVKHLESDSTESEPFWN 236
Query: 820 PIEFVED-EPYSTGRNDLTILSNNNIASGGSLFERDQPVEEPWLLQSA---LSFKDEI-- 659
+ + Y G+ +SN ++A L ERDQP+EEPWL QS+ L ++D +
Sbjct: 237 DLTHADQLYSYDDGKTATHEVSNFDMA----LSERDQPIEEPWLFQSSPILLVYEDTVKP 292
Query: 658 DSSSKIQSPEEVLKQQELPNKSYQGAE--IPEDTSKLTNFEDSVSTVILINSSICTMQRI 485
D K + ++ + N+ +Q E +PE S ++ ++ VSTVILINSSICTMQRI
Sbjct: 293 DMPEKSNNEKDEAMILDSDNQKFQDTESLLPEKGSLISK-DNFVSTVILINSSICTMQRI 351
Query: 484 AVMEEGKLVELLLEPVKNNVHCDSVYLGVV 395
AV+E+ KLVELLLEPVK+NV CDSVYLGVV
Sbjct: 352 AVLEDEKLVELLLEPVKSNVQCDSVYLGVV 381
Score = 62.8 bits (151), Expect(2) = 9e-81
Identities = 40/99 (40%), Positives = 52/99 (52%), Gaps = 8/99 (8%)
Frame = -3
Query: 392 RPSLMDIKQNREPFIFPPFRRKGKEKEVNGAAIHKHKQHPDIF--SSSSHGVEVI----- 234
RPSLMDIK REPFIFPPFR + K++EVNG+A ++H + S+SH E +
Sbjct: 399 RPSLMDIKHYREPFIFPPFRCRTKKQEVNGSASAALEEHAVTYDNDSTSHNTEDVAEADS 458
Query: 233 -DDIEGIEFKDDPDQFSXXXXXXXXXXXXXDANVNGSIV 120
DD+ E DD + NVNGSI+
Sbjct: 459 QDDLVQFEHNDDEEH-----DGDDFDVSEVLKNVNGSII 492
>ref|XP_006469420.1| PREDICTED: ribonuclease E/G-like protein, chloroplastic-like isoform
X2 [Citrus sinensis]
Length = 1005
Score = 267 bits (683), Expect(2) = 9e-81
Identities = 153/330 (46%), Positives = 205/330 (62%), Gaps = 13/330 (3%)
Frame = -1
Query: 1345 NFLLKSSPTVSARKDTSS---QEFCEVLWTVEADLADGQILYVTGDSITLGCWEPVMAIR 1175
N L+KS P +SA + S+ Q CE++WTVEADL GQ+LY+TGD LGCW+P MAI
Sbjct: 57 NSLIKS-PIMSANRGKSASAIQGLCEIVWTVEADLEAGQLLYITGDPSVLGCWDPDMAIL 115
Query: 1174 MVPSSERPNLWKTEVKVPCGANFKYNYFIRGDRWPSSDLTWRPGPEFSVSIPLPSTQNRK 995
M P+ E NLWK EVK+ CG NFKYN+F++G+ W S D+ WR GPEFS+ +P Q+RK
Sbjct: 116 MSPT-EHENLWKVEVKIACGVNFKYNFFMKGETWSSGDIIWRGGPEFSLLVPF--NQDRK 172
Query: 994 VVVRDLWMEVQIEKVQVHSWGSWIEETNLTADQVIPSPNEGKH--RNLRSQKIVRDSSLS 821
++VRD WM + H W SWIEET + I P ++L S + +
Sbjct: 173 ILVRDSWMRFNTKNSPTHIWDSWIEETYIPVKSPISVPETDDEIVKHLESDSTESEPFWN 232
Query: 820 PIEFVED-EPYSTGRNDLTILSNNNIASGGSLFERDQPVEEPWLLQSA---LSFKDEI-- 659
+ + Y G+ +SN ++A L ERDQP+EEPWL QS+ L ++D +
Sbjct: 233 DLTHADQLYSYDDGKTATHEVSNFDMA----LSERDQPIEEPWLFQSSPILLVYEDTVKP 288
Query: 658 DSSSKIQSPEEVLKQQELPNKSYQGAE--IPEDTSKLTNFEDSVSTVILINSSICTMQRI 485
D K + ++ + N+ +Q E +PE S ++ ++ VSTVILINSSICTMQRI
Sbjct: 289 DMPEKSNNEKDEAMILDSDNQKFQDTESLLPEKGSLISK-DNFVSTVILINSSICTMQRI 347
Query: 484 AVMEEGKLVELLLEPVKNNVHCDSVYLGVV 395
AV+E+ KLVELLLEPVK+NV CDSVYLGVV
Sbjct: 348 AVLEDEKLVELLLEPVKSNVQCDSVYLGVV 377
Score = 62.8 bits (151), Expect(2) = 9e-81
Identities = 40/99 (40%), Positives = 52/99 (52%), Gaps = 8/99 (8%)
Frame = -3
Query: 392 RPSLMDIKQNREPFIFPPFRRKGKEKEVNGAAIHKHKQHPDIF--SSSSHGVEVI----- 234
RPSLMDIK REPFIFPPFR + K++EVNG+A ++H + S+SH E +
Sbjct: 395 RPSLMDIKHYREPFIFPPFRCRTKKQEVNGSASAALEEHAVTYDNDSTSHNTEDVAEADS 454
Query: 233 -DDIEGIEFKDDPDQFSXXXXXXXXXXXXXDANVNGSIV 120
DD+ E DD + NVNGSI+
Sbjct: 455 QDDLVQFEHNDDEEH-----DGDDFDVSEVLKNVNGSII 488
>ref|XP_006447836.1| hypothetical protein CICLE_v10014166mg [Citrus clementina]
gi|557550447|gb|ESR61076.1| hypothetical protein
CICLE_v10014166mg [Citrus clementina]
Length = 960
Score = 267 bits (683), Expect(2) = 9e-81
Identities = 153/330 (46%), Positives = 205/330 (62%), Gaps = 13/330 (3%)
Frame = -1
Query: 1345 NFLLKSSPTVSARKDTSS---QEFCEVLWTVEADLADGQILYVTGDSITLGCWEPVMAIR 1175
N L+KS P +SA + S+ Q CE++WTVEADL GQ+LY+TGD LGCW+P MAI
Sbjct: 12 NSLIKS-PIMSANRGKSASAIQGLCEIVWTVEADLEAGQLLYITGDPSVLGCWDPDMAIL 70
Query: 1174 MVPSSERPNLWKTEVKVPCGANFKYNYFIRGDRWPSSDLTWRPGPEFSVSIPLPSTQNRK 995
M P+ E NLWK EVK+ CG NFKYN+F++G+ W S D+ WR GPEFS+ +P Q+RK
Sbjct: 71 MSPT-EHENLWKAEVKIACGVNFKYNFFMKGETWSSGDIIWRGGPEFSLLVPF--NQDRK 127
Query: 994 VVVRDLWMEVQIEKVQVHSWGSWIEETNLTADQVIPSPNEGKH--RNLRSQKIVRDSSLS 821
++VRD WM + H W SWIEET + I P ++L S + +
Sbjct: 128 ILVRDSWMRFNTKNSPTHIWDSWIEETYIPVKSPISVPETDDEIVKHLESDSTESEPFWN 187
Query: 820 PIEFVED-EPYSTGRNDLTILSNNNIASGGSLFERDQPVEEPWLLQSA---LSFKDEI-- 659
+ + Y G+ +SN ++A L ERDQP+EEPWL QS+ L ++D +
Sbjct: 188 DLTHADQLYSYDDGKTATHEVSNFDMA----LSERDQPIEEPWLFQSSPILLVYEDTVKP 243
Query: 658 DSSSKIQSPEEVLKQQELPNKSYQGAE--IPEDTSKLTNFEDSVSTVILINSSICTMQRI 485
D K + ++ + N+ +Q E +PE S ++ ++ VSTVILINSSICTMQRI
Sbjct: 244 DMPEKSNNEKDEAMILDSDNQKFQDTESLLPEKGSLISK-DNFVSTVILINSSICTMQRI 302
Query: 484 AVMEEGKLVELLLEPVKNNVHCDSVYLGVV 395
AV+E+ KLVELLLEPVK+NV CDSVYLGVV
Sbjct: 303 AVLEDEKLVELLLEPVKSNVQCDSVYLGVV 332
Score = 62.8 bits (151), Expect(2) = 9e-81
Identities = 40/99 (40%), Positives = 52/99 (52%), Gaps = 8/99 (8%)
Frame = -3
Query: 392 RPSLMDIKQNREPFIFPPFRRKGKEKEVNGAAIHKHKQHPDIF--SSSSHGVEVI----- 234
RPSLMDIK REPFIFPPFR + K++EVNG+A ++H + S+SH E +
Sbjct: 350 RPSLMDIKHYREPFIFPPFRCRTKKQEVNGSASAALEEHAVTYDNDSTSHNTEDVAEADS 409
Query: 233 -DDIEGIEFKDDPDQFSXXXXXXXXXXXXXDANVNGSIV 120
DD+ E DD + NVNGSI+
Sbjct: 410 QDDLVQFEHNDDEEH-----DGDDFDVSEVLKNVNGSII 443
>ref|XP_010929029.1| PREDICTED: ribonuclease E/G-like protein, chloroplastic [Elaeis
guineensis]
Length = 1039
Score = 290 bits (742), Expect(2) = 1e-80
Identities = 152/324 (46%), Positives = 210/324 (64%), Gaps = 10/324 (3%)
Frame = -1
Query: 1336 LKSSPTVSARKDTSS---QEFCEVLWTVEADLADGQILYVTGDSITLGCWEPVMAIRMVP 1166
L SP +S R S+ + C+VLW +EAD+AD ++++TGD +TLGCWEP MAI + P
Sbjct: 78 LSRSPLMSMRNGDSALTCKGLCKVLWNLEADIADDYLIFITGDPVTLGCWEPEMAILLSP 137
Query: 1165 SSERPNLWKTEVKVPCGANFKYNYFIRGDRWPSSDLTWRPGPEFSVSIPLPSTQNRKVVV 986
+E NLWKTE+ VPCG +FKYNYFIR ++ PS D WRPGPEFS+S+P +N +VV
Sbjct: 138 CTECDNLWKTEITVPCGIHFKYNYFIREEKKPSCDRIWRPGPEFSLSVPFVGKENDVIVV 197
Query: 985 RDLWMEVQIEKVQVHSWGSWIEETNLTADQVIPSP----NEGKHRNLRSQK-IVRDSSLS 821
RD WM +++K+ V SWGSW+ + NL + + P + G H LRS + S
Sbjct: 198 RDSWMRTRVQKLPVPSWGSWMVDINLPKNHIKPGRRRAFSAGVHEILRSPNGVPLQRKQS 257
Query: 820 PIEFVEDEPYSTGRNDLTILSNNNIASGGSLFERDQPVEEPWLLQSALSFKDEIDSSSKI 641
++ + +E Y ++ +N +G +L E DQPVEEPWLL S L F + +
Sbjct: 258 SVDCLPEENYKPAEKNV----KSNDRNGETLSETDQPVEEPWLLGSMLVFMMDFVGLDEA 313
Query: 640 QSPEEVLKQQELPNKSYQGAEI--PEDTSKLTNFEDSVSTVILINSSICTMQRIAVMEEG 467
++V K ++ P + + AE+ P+D ++ + E+ STVILINSS+CTMQRIAV+E+G
Sbjct: 314 SHQDKVHK-KDFPGR-FPDAELLAPDDDHRVVHAEEPASTVILINSSVCTMQRIAVLEDG 371
Query: 466 KLVELLLEPVKNNVHCDSVYLGVV 395
KLVELLLEPVKNNV CDS+YLGVV
Sbjct: 372 KLVELLLEPVKNNVQCDSIYLGVV 395
Score = 39.7 bits (91), Expect(2) = 1e-80
Identities = 23/64 (35%), Positives = 35/64 (54%)
Frame = -3
Query: 392 RPSLMDIKQNREPFIFPPFRRKGKEKEVNGAAIHKHKQHPDIFSSSSHGVEVIDDIEGIE 213
RPSLM +K NREPF++ PF + + K VNG++ P + + + +DD E +
Sbjct: 413 RPSLMGVKHNREPFVY-PFDHEVRGKSVNGSS------KPKGYFDTHENDQSLDDDEDED 465
Query: 212 FKDD 201
DD
Sbjct: 466 DDDD 469
>ref|XP_002524601.1| hypothetical protein RCOM_1213430 [Ricinus communis]
gi|223536154|gb|EEF37809.1| hypothetical protein
RCOM_1213430 [Ricinus communis]
Length = 963
Score = 268 bits (684), Expect(2) = 3e-80
Identities = 150/317 (47%), Positives = 198/317 (62%), Gaps = 10/317 (3%)
Frame = -1
Query: 1315 SARKDTSSQEFCEVLWTVEADLADGQILYVTGDSITLGCWEPVMAIRMVPSSERPNLWKT 1136
S R T+S E C V+WTVEADL GQ+LY+TG+ I+LG W+P MA+ M P+ E NLW T
Sbjct: 9 SGRSITTSGELCTVVWTVEADLTAGQLLYITGEPISLGGWQPEMALLMCPT-EHANLWTT 67
Query: 1135 EVKVPCGANFKYNYFIRGDRWPSSDLTWRPGPEFSVSIPLPSTQNRKVVVRDLWMEVQIE 956
EVK+P G N KYN+FI+ +R S+DL WRPGPEFS+SIP+ Q+ K++VRD W++ IE
Sbjct: 68 EVKIPSGVNLKYNFFIKEERPASADLIWRPGPEFSLSIPVK--QDGKIIVRDSWLKNNIE 125
Query: 955 KVQVHSWGSWIEETNLTADQVIPSPNEGKHRNLRSQKIVRDSS---LSPIEFVEDEPYST 785
+ + WGSWI ET L + + +H+ + IV S L+ + F ++
Sbjct: 126 RSPPYVWGSWIGETYLPVQSLNSAQTRDEHQIMNGVDIVLKESEAFLNDVTFENKLYFNN 185
Query: 784 GRNDLTILSNNNIASGGSLFERDQPVEEPWLLQSALSF---KDEI----DSSSKIQSPEE 626
+ + N+ L ERDQPVEEPWLLQS++ F KD+I ++ I + +
Sbjct: 186 KHTNSVGQDDQNLV----LSERDQPVEEPWLLQSSIIFVISKDKIMPNISKNNNIAANDS 241
Query: 625 VLKQQELPNKSYQGAEIPEDTSKLTNFEDSVSTVILINSSICTMQRIAVMEEGKLVELLL 446
+ + P D S +DS+ST+ILINSSICTMQRIAV+EEGKLVELLL
Sbjct: 242 KAWDANSQHLQVKDKLSPADGSNFILKDDSISTIILINSSICTMQRIAVLEEGKLVELLL 301
Query: 445 EPVKNNVHCDSVYLGVV 395
EPVK NV CDSVYLGVV
Sbjct: 302 EPVKTNVQCDSVYLGVV 318
Score = 60.8 bits (146), Expect(2) = 3e-80
Identities = 37/98 (37%), Positives = 53/98 (54%), Gaps = 7/98 (7%)
Frame = -3
Query: 392 RPSLMDIKQNREPFIFPPFRRKGKEKEVNGAAIHKHKQH--PDIFSSSSHGVEVIDDIEG 219
RPSLMDIKQ+REPFIFPPFR+K K++++N + + ++H D +S +E IDD+
Sbjct: 336 RPSLMDIKQSREPFIFPPFRQKTKKEKMNDSGLDSLEEHQAADGNEHTSQDIEGIDDVAE 395
Query: 218 IEFKDD-----PDQFSXXXXXXXXXXXXXDANVNGSIV 120
++D + NVNGSIV
Sbjct: 396 FISQEDLVSLPHNDHDEHEADEDFDISEVKENVNGSIV 433
>gb|KHG25631.1| Ribonuclease E [Gossypium arboreum]
Length = 1012
Score = 276 bits (705), Expect(2) = 4e-80
Identities = 158/325 (48%), Positives = 208/325 (64%), Gaps = 11/325 (3%)
Frame = -1
Query: 1336 LKSSPTVSARKDTSSQEF---CEVLWTVEADLADGQILYVTGDSITLGCWEPVMAIRMVP 1166
L SP +SA+K S+ F EV+WTVEADLA+GQ+LY++G+ + LGCW+P AI M P
Sbjct: 73 LTRSPVMSAKKGLSTATFDGLYEVVWTVEADLAEGQLLYISGEPVALGCWKPETAILMSP 132
Query: 1165 SSERPNLWKTEVKVPCGANFKYNYFIRGDRWPSSDLTWRPGPEFSVSIPLPSTQNRKVVV 986
+ E N+W EVK+ CG NFKYNYFI+G++ PSSD+TWRPGP+FS+S+P RK+VV
Sbjct: 133 T-EHANIWMAEVKIACGVNFKYNYFIKGEKQPSSDITWRPGPQFSLSVPPRKKPERKIVV 191
Query: 985 RDLWMEVQIEKVQVHSWGSWIEETNLTADQVIPSPNEGKHRNLRSQKIVRDSSLSP---- 818
RD WM + E H+WGSWIEE + + PS ++ + + + D S S
Sbjct: 192 RDSWMSPKSETYPPHTWGSWIEE---ISTPIKPSVSQAEDEDKIMKHHESDLSESKPFLN 248
Query: 817 --IEFVEDEPYSTGRNDLTILSNNNIASGGSLFERDQPVEEPWLLQSALSFKDEIDSSSK 644
I E EP +D+ +S+ ++ ERDQPVEEPW L S LS D +
Sbjct: 249 DLIAMDEIEP-----SDMVAISDAEEGLYSTISERDQPVEEPWFLHSPLSCLSYGD-GME 302
Query: 643 IQSPEEVLKQQELPNKSYQGAE--IPEDTSKLTNFEDSVSTVILINSSICTMQRIAVMEE 470
S ++ + E N+ Q E + E+ S + F+DSVSTVILINSSICTMQRIAV+E+
Sbjct: 303 ANSAKDEKTRLEANNQHDQITEKFLSEENSHVI-FKDSVSTVILINSSICTMQRIAVLED 361
Query: 469 GKLVELLLEPVKNNVHCDSVYLGVV 395
GKLVELLLEPVK++V CDSVYLGVV
Sbjct: 362 GKLVELLLEPVKSHVQCDSVYLGVV 386
Score = 52.0 bits (123), Expect(2) = 4e-80
Identities = 37/101 (36%), Positives = 49/101 (48%), Gaps = 8/101 (7%)
Frame = -3
Query: 398 SXRPSLMDIKQNREPFIFPPFRRKGKE--KEVNGAAIHKHKQHPDIFSSSSHGVEVIDDI 225
S R SLMDIK NREPFIFPPFRR+ K+ K+ ++ + +I SS V +D
Sbjct: 402 SSRHSLMDIKHNREPFIFPPFRRRKKKQAKDFASGSLSEPSAANEI-EPSSEDVVFFEDA 460
Query: 224 EGIEFKDDPDQF------SXXXXXXXXXXXXXDANVNGSIV 120
+F+D+ QF NVNGS+V
Sbjct: 461 AEDDFEDEDMQFMHNNSDGNDVGDDFDVLGVLKENVNGSVV 501
>ref|XP_012089614.1| PREDICTED: ribonuclease E/G-like protein, chloroplastic isoform X1
[Jatropha curcas] gi|643707510|gb|KDP23005.1|
hypothetical protein JCGZ_01727 [Jatropha curcas]
Length = 990
Score = 267 bits (682), Expect(2) = 3e-79
Identities = 154/327 (47%), Positives = 207/327 (63%), Gaps = 10/327 (3%)
Frame = -1
Query: 1345 NFLLKSSPTVSARKDTS---SQEFCEVLWTVEADLADGQILYVTGDSITLGCWEPVMAIR 1175
NF +SP +S +K S S+ C+V+WTVEA LADGQ LYVTGD +LG W+P MA++
Sbjct: 75 NFSSIASPVMSMKKGHSNITSRGLCDVIWTVEAALADGQFLYVTGDPNSLGGWKPEMALQ 134
Query: 1174 MVPSSERPNLWKTEVKVPCGANFKYNYFIRGDRWPSSDLTWRPGPEFSVSIPLPSTQNRK 995
M P+ E NLWK EVK+ G NFKYNYFI+ + PSSD+ WRPGPEFS+S+PL + ++RK
Sbjct: 135 MCPT-EHANLWKIEVKMHSGVNFKYNYFIKEESRPSSDIIWRPGPEFSLSVPL-TIKDRK 192
Query: 994 VVVRDLWMEVQIEKVQVHSWGSWIEETNLTADQVIPSPNEGKHRNLRSQKIVRDSSLSPI 815
++VRD W++ E+ H WGSWI E ++ + +H + I + S + +
Sbjct: 193 IMVRDSWLKFNTERPPPHLWGSWIGEKYPPEQPLVSAQARDEHETVNHHAIDYEGSKTFL 252
Query: 814 EFVEDEPYSTGRNDLTILSNNNIASGGSL----FERDQPVEEPWLLQSA--LSFKDEIDS 653
+ E L + N+A G L ERDQPVEEPWLLQ + L KDEI
Sbjct: 253 NGTKVE------EKLYLNKQTNMARNGGLNSNFSERDQPVEEPWLLQLSCVLVSKDEI-- 304
Query: 652 SSKIQSPEEVLKQQELPNKSYQGAE-IPEDTSKLTNFEDSVSTVILINSSICTMQRIAVM 476
+ P++ + ++ ++ Q + + D + L +DSVST+ILINSSICTMQRIA++
Sbjct: 305 --MLDVPKDDAIKFDVSSQHLQDEDKLSADGNNLMLKDDSVSTIILINSSICTMQRIAIL 362
Query: 475 EEGKLVELLLEPVKNNVHCDSVYLGVV 395
E+GKLVELLLEPVK NV CDSVYLGVV
Sbjct: 363 EDGKLVELLLEPVKTNVQCDSVYLGVV 389
Score = 58.2 bits (139), Expect(2) = 3e-79
Identities = 35/96 (36%), Positives = 52/96 (54%), Gaps = 5/96 (5%)
Frame = -3
Query: 392 RPSLMDIKQNREPFIFPPFRRKGKEKEVNGAAIHKHKQHPDIFSSSSHGVEVIDDIEGIE 213
RPSLMDI+ +REPFIFPPFR+ K+++VNG+ + ++ P + VE I D+
Sbjct: 407 RPSLMDIRHSREPFIFPPFRQTTKKRKVNGSGVEGPEEQPAADEHALRDVEGIYDLVEFI 466
Query: 212 FKDDPDQFSXXXXXXXXXXXXXDA-----NVNGSIV 120
++D F+ D+ N+NGSIV
Sbjct: 467 SQEDLVPFTHHDQEEHEVDEDFDSSEVKGNINGSIV 502
>ref|XP_012089616.1| PREDICTED: ribonuclease E/G-like protein, chloroplastic isoform X3
[Jatropha curcas]
Length = 804
Score = 267 bits (682), Expect(2) = 3e-79
Identities = 154/327 (47%), Positives = 207/327 (63%), Gaps = 10/327 (3%)
Frame = -1
Query: 1345 NFLLKSSPTVSARKDTS---SQEFCEVLWTVEADLADGQILYVTGDSITLGCWEPVMAIR 1175
NF +SP +S +K S S+ C+V+WTVEA LADGQ LYVTGD +LG W+P MA++
Sbjct: 75 NFSSIASPVMSMKKGHSNITSRGLCDVIWTVEAALADGQFLYVTGDPNSLGGWKPEMALQ 134
Query: 1174 MVPSSERPNLWKTEVKVPCGANFKYNYFIRGDRWPSSDLTWRPGPEFSVSIPLPSTQNRK 995
M P+ E NLWK EVK+ G NFKYNYFI+ + PSSD+ WRPGPEFS+S+PL + ++RK
Sbjct: 135 MCPT-EHANLWKIEVKMHSGVNFKYNYFIKEESRPSSDIIWRPGPEFSLSVPL-TIKDRK 192
Query: 994 VVVRDLWMEVQIEKVQVHSWGSWIEETNLTADQVIPSPNEGKHRNLRSQKIVRDSSLSPI 815
++VRD W++ E+ H WGSWI E ++ + +H + I + S + +
Sbjct: 193 IMVRDSWLKFNTERPPPHLWGSWIGEKYPPEQPLVSAQARDEHETVNHHAIDYEGSKTFL 252
Query: 814 EFVEDEPYSTGRNDLTILSNNNIASGGSL----FERDQPVEEPWLLQSA--LSFKDEIDS 653
+ E L + N+A G L ERDQPVEEPWLLQ + L KDEI
Sbjct: 253 NGTKVE------EKLYLNKQTNMARNGGLNSNFSERDQPVEEPWLLQLSCVLVSKDEI-- 304
Query: 652 SSKIQSPEEVLKQQELPNKSYQGAE-IPEDTSKLTNFEDSVSTVILINSSICTMQRIAVM 476
+ P++ + ++ ++ Q + + D + L +DSVST+ILINSSICTMQRIA++
Sbjct: 305 --MLDVPKDDAIKFDVSSQHLQDEDKLSADGNNLMLKDDSVSTIILINSSICTMQRIAIL 362
Query: 475 EEGKLVELLLEPVKNNVHCDSVYLGVV 395
E+GKLVELLLEPVK NV CDSVYLGVV
Sbjct: 363 EDGKLVELLLEPVKTNVQCDSVYLGVV 389
Score = 58.2 bits (139), Expect(2) = 3e-79
Identities = 35/96 (36%), Positives = 52/96 (54%), Gaps = 5/96 (5%)
Frame = -3
Query: 392 RPSLMDIKQNREPFIFPPFRRKGKEKEVNGAAIHKHKQHPDIFSSSSHGVEVIDDIEGIE 213
RPSLMDI+ +REPFIFPPFR+ K+++VNG+ + ++ P + VE I D+
Sbjct: 407 RPSLMDIRHSREPFIFPPFRQTTKKRKVNGSGVEGPEEQPAADEHALRDVEGIYDLVEFI 466
Query: 212 FKDDPDQFSXXXXXXXXXXXXXDA-----NVNGSIV 120
++D F+ D+ N+NGSIV
Sbjct: 467 SQEDLVPFTHHDQEEHEVDEDFDSSEVKGNINGSIV 502
>ref|XP_007049409.1| RNAse E/G-like [Theobroma cacao] gi|508701670|gb|EOX93566.1| RNAse
E/G-like [Theobroma cacao]
Length = 1015
Score = 275 bits (703), Expect(2) = 3e-78
Identities = 158/339 (46%), Positives = 209/339 (61%), Gaps = 25/339 (7%)
Frame = -1
Query: 1336 LKSSPTVSARKDTSSQEF---CEVLWTVEADLADGQILYVTGDSITLGCWEPVMAIRMVP 1166
L SP +S +K S+ F CEV+WTVEADLA+GQ+LY++G+S+ LGCWEP AI M P
Sbjct: 67 LTRSPIMSMKKGLSTVTFEGLCEVVWTVEADLAEGQLLYISGESVALGCWEPETAILMSP 126
Query: 1165 SSERPNLWKTEVKVPCGANFKYNYFIRGDRWPSSDLTWRPGPEFSVSIPLPSTQNRKVVV 986
+ N+W+ EVK+ G +FKYNYFI+G P SD+TWRPGP+FS+S+P Q R++VV
Sbjct: 127 TVHA-NIWRAEVKIAYGVSFKYNYFIKGKMQPLSDITWRPGPQFSLSVPPCKKQERRIVV 185
Query: 985 RDLWMEVQIEKVQVHSWGSWIEETNLTADQVIPSPNEGKH--RNLRSQKIVRDSSLSPIE 812
RD WM + E H WGSWIEET++ + E + ++L+S +
Sbjct: 186 RDSWMRSKTECCPPHVWGSWIEETDIPIKPSVSVQVEDEEMMKHLKS------------D 233
Query: 811 FVEDEPYSTGRNDLTIL-------------SNNNIASGGSLFERDQPVEEPWLLQSALSF 671
E EP+ NDLT+ S + S L ERDQPVEEPW S+ F
Sbjct: 234 LNESEPF---LNDLTVKDEIEPSDVVAICDSEEGLYSYTLLSERDQPVEEPWFFHSSPFF 290
Query: 670 KD-----EIDSSSKIQSPEEVLKQQELPNKSYQGAE--IPEDTSKLTNFEDSVSTVILIN 512
E D S ++ + + E N+ YQ E +PE++S + + +DSVSTVILIN
Sbjct: 291 FTYGDDLEADMLKYNDSVKDEITRLEANNQQYQITEKFLPEESSPIISKKDSVSTVILIN 350
Query: 511 SSICTMQRIAVMEEGKLVELLLEPVKNNVHCDSVYLGVV 395
SSICTMQRIAV+E+GKLVELLLEPVK++V CDSVY+GVV
Sbjct: 351 SSICTMQRIAVLEDGKLVELLLEPVKSHVQCDSVYVGVV 389
Score = 46.6 bits (109), Expect(2) = 3e-78
Identities = 25/41 (60%), Positives = 26/41 (63%)
Frame = -3
Query: 398 SXRPSLMDIKQNREPFIFPPFRRKGKEKEVNGAAIHKHKQH 276
S R SLMDIK NR PFIFPPFRR+ K K V G QH
Sbjct: 405 SSRHSLMDIKHNRGPFIFPPFRRRTK-KRVKGLVSGAPSQH 444
>ref|XP_010048225.1| PREDICTED: ribonuclease E/G-like protein, chloroplastic isoform X1
[Eucalyptus grandis]
Length = 1009
Score = 263 bits (671), Expect(2) = 1e-75
Identities = 152/323 (47%), Positives = 201/323 (62%), Gaps = 14/323 (4%)
Frame = -1
Query: 1321 TVSARKDTSSQEFCEVLWTVEADLADGQILYVTGDSITLGCWEPVMAIRMVPSSERPNLW 1142
T + +S+ +C+V+WTVEA++AD Q+LY+ GD + LGCWEP MAI M P+ + NLW
Sbjct: 58 TRRGKSSITSESYCKVVWTVEAEVADDQLLYLAGDLMELGCWEPQMAIPMSPT-QHANLW 116
Query: 1141 KTEVKVPCGANFKYNYFIRGDRWPSSDLTWRPGPEFSVSIPLPSTQNRKVVVRDLWMEVQ 962
K EVK+ CG +FKYNYF +G WP D WRPGPEFS+ IP Q++ VVVRD W E+Q
Sbjct: 117 KVEVKIACGVSFKYNYFKKGASWPPYDTIWRPGPEFSLVIPQHYEQDKNVVVRDSWKELQ 176
Query: 961 ----IEKVQVHSWGSWIEETNLTADQV---IPSPNEGKHRNLRSQKIVRDSSLSPIEFVE 803
I Q+ WGSWIEE L + + +P + R L + + SL V
Sbjct: 177 TGSRISSAQL--WGSWIEEIYLPIEPLTSAVPRDEDEIVRCLGTDLLEAGRSLDAE--VN 232
Query: 802 DEPYSTGRNDLTILSNNNIASGGSLF--ERDQPVEEPWL---LQSALSFKDEIDSSSKIQ 638
+E Y+ N+ ++S+ G + F ER Q +EEPWL L S +S + D ++
Sbjct: 233 NESYT---NNEHMISDKQKDYGSATFISERQQAIEEPWLISTLPSHISKDVDFDIPTESG 289
Query: 637 SPEEVLKQQELPNKSYQ--GAEIPEDTSKLTNFEDSVSTVILINSSICTMQRIAVMEEGK 464
S E+ Q + N+ YQ G + E+ L + EDS+STVILINSSICTMQRIAV+EEGK
Sbjct: 290 SGEDEFTQTDSENQRYQDAGELLAEEGKHLVSVEDSISTVILINSSICTMQRIAVLEEGK 349
Query: 463 LVELLLEPVKNNVHCDSVYLGVV 395
LVELLLEPVK +V CDSVYLG+V
Sbjct: 350 LVELLLEPVKTDVQCDSVYLGIV 372
Score = 50.1 bits (118), Expect(2) = 1e-75
Identities = 26/67 (38%), Positives = 42/67 (62%), Gaps = 1/67 (1%)
Frame = -3
Query: 410 VSWRSXRPSLMDIKQNREPFIFPPFRRKGKEKEVNGAAIHKHKQHPDIFSSSSHG-VEVI 234
V+ + R SLMDI+ NREPF+FPPF ++ ++ + NG+ + HP +HG V +
Sbjct: 384 VNISNSRHSLMDIRHNREPFVFPPFHQQMRKTKPNGSENGAFEGHP-----LNHGDVHAL 438
Query: 233 DDIEGIE 213
D++E I+
Sbjct: 439 DNVESID 445
>gb|KCW89039.1| hypothetical protein EUGRSUZ_A01367 [Eucalyptus grandis]
Length = 959
Score = 263 bits (671), Expect(2) = 1e-75
Identities = 152/323 (47%), Positives = 201/323 (62%), Gaps = 14/323 (4%)
Frame = -1
Query: 1321 TVSARKDTSSQEFCEVLWTVEADLADGQILYVTGDSITLGCWEPVMAIRMVPSSERPNLW 1142
T + +S+ +C+V+WTVEA++AD Q+LY+ GD + LGCWEP MAI M P+ + NLW
Sbjct: 8 TRRGKSSITSESYCKVVWTVEAEVADDQLLYLAGDLMELGCWEPQMAIPMSPT-QHANLW 66
Query: 1141 KTEVKVPCGANFKYNYFIRGDRWPSSDLTWRPGPEFSVSIPLPSTQNRKVVVRDLWMEVQ 962
K EVK+ CG +FKYNYF +G WP D WRPGPEFS+ IP Q++ VVVRD W E+Q
Sbjct: 67 KVEVKIACGVSFKYNYFKKGASWPPYDTIWRPGPEFSLVIPQHYEQDKNVVVRDSWKELQ 126
Query: 961 ----IEKVQVHSWGSWIEETNLTADQV---IPSPNEGKHRNLRSQKIVRDSSLSPIEFVE 803
I Q+ WGSWIEE L + + +P + R L + + SL V
Sbjct: 127 TGSRISSAQL--WGSWIEEIYLPIEPLTSAVPRDEDEIVRCLGTDLLEAGRSLDAE--VN 182
Query: 802 DEPYSTGRNDLTILSNNNIASGGSLF--ERDQPVEEPWL---LQSALSFKDEIDSSSKIQ 638
+E Y+ N+ ++S+ G + F ER Q +EEPWL L S +S + D ++
Sbjct: 183 NESYT---NNEHMISDKQKDYGSATFISERQQAIEEPWLISTLPSHISKDVDFDIPTESG 239
Query: 637 SPEEVLKQQELPNKSYQ--GAEIPEDTSKLTNFEDSVSTVILINSSICTMQRIAVMEEGK 464
S E+ Q + N+ YQ G + E+ L + EDS+STVILINSSICTMQRIAV+EEGK
Sbjct: 240 SGEDEFTQTDSENQRYQDAGELLAEEGKHLVSVEDSISTVILINSSICTMQRIAVLEEGK 299
Query: 463 LVELLLEPVKNNVHCDSVYLGVV 395
LVELLLEPVK +V CDSVYLG+V
Sbjct: 300 LVELLLEPVKTDVQCDSVYLGIV 322
Score = 50.1 bits (118), Expect(2) = 1e-75
Identities = 26/67 (38%), Positives = 42/67 (62%), Gaps = 1/67 (1%)
Frame = -3
Query: 410 VSWRSXRPSLMDIKQNREPFIFPPFRRKGKEKEVNGAAIHKHKQHPDIFSSSSHG-VEVI 234
V+ + R SLMDI+ NREPF+FPPF ++ ++ + NG+ + HP +HG V +
Sbjct: 334 VNISNSRHSLMDIRHNREPFVFPPFHQQMRKTKPNGSENGAFEGHP-----LNHGDVHAL 388
Query: 233 DDIEGIE 213
D++E I+
Sbjct: 389 DNVESID 395