BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver30_contig00006399
         (2257 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_010660973.1| PREDICTED: chloroplastic group IIA intron sp...   824   0.0  
emb|CBI34982.3| unnamed protein product [Vitis vinifera]              824   0.0  
ref|XP_002275511.1| PREDICTED: chloroplastic group IIA intron sp...   824   0.0  
ref|XP_007217083.1| hypothetical protein PRUPE_ppa000515mg [Prun...   807   0.0  
ref|XP_008230671.1| PREDICTED: chloroplastic group IIA intron sp...   802   0.0  
ref|XP_008230670.1| PREDICTED: chloroplastic group IIA intron sp...   802   0.0  
ref|XP_010255197.1| PREDICTED: chloroplastic group IIA intron sp...   801   0.0  
ref|XP_009614930.1| PREDICTED: chloroplastic group IIA intron sp...   788   0.0  
ref|XP_009762860.1| PREDICTED: chloroplastic group IIA intron sp...   785   0.0  
ref|XP_008341495.1| PREDICTED: LOW QUALITY PROTEIN: chloroplasti...   783   0.0  
ref|XP_012082331.1| PREDICTED: chloroplastic group IIA intron sp...   782   0.0  
ref|XP_012082320.1| PREDICTED: chloroplastic group IIA intron sp...   782   0.0  
ref|XP_012082313.1| PREDICTED: chloroplastic group IIA intron sp...   782   0.0  
ref|XP_011098529.1| PREDICTED: chloroplastic group IIA intron sp...   779   0.0  
ref|XP_002517407.1| conserved hypothetical protein [Ricinus comm...   778   0.0  
ref|XP_006338519.1| PREDICTED: chloroplastic group IIA intron sp...   778   0.0  
ref|XP_006338518.1| PREDICTED: chloroplastic group IIA intron sp...   778   0.0  
ref|XP_010100925.1| Chloroplastic group IIA intron splicing faci...   775   0.0  
ref|XP_004232267.1| PREDICTED: chloroplastic group IIA intron sp...   775   0.0  
ref|XP_010687964.1| PREDICTED: chloroplastic group IIA intron sp...   773   0.0  

>ref|XP_010660973.1| PREDICTED: chloroplastic group IIA intron splicing facilitator CRS1,
            chloroplastic isoform X2 [Vitis vinifera]
          Length = 1044

 Score =  824 bits (2129), Expect = 0.0
 Identities = 436/726 (60%), Positives = 521/726 (71%), Gaps = 31/726 (4%)
 Frame = -1

Query: 2152 MLLHQYHLSSPFPINTLNSSQNLFLFSKSNKTSPNFSKPFVTNSSNTSITTKAETVSKTA 1973
            + L ++H   P P  T  SS      S     +P  SK F+  +SN      A+T+ KTA
Sbjct: 27   LTLCRHHSPFPSPTPTFTSSPPSISPSTFKTLNPKPSK-FILRASNPD----AQTLPKTA 81

Query: 1972 IERIAEKLRNLGYI---EENKENPEHKINNHTGTAGEIFLPFTQNLPKQRVGYTIDTSWS 1802
            I+RIAEKLR+LGY+   E  K     K  N  G+AGEIF+P    LPK RVG+TID SWS
Sbjct: 82   IQRIAEKLRSLGYVDGDESRKVLSSDKPAN--GSAGEIFVPLPNQLPKHRVGHTIDQSWS 139

Query: 1801 TPENPVPRPGSGNAISRFXXXXXXXXXXXXXXXXXXXKLREEKVPTLAELTIPQHELRRI 1622
             PENPVP PG+G  I+RF                      +E+ PTLAELT+P+ ELRR+
Sbjct: 140  LPENPVPEPGTGGVITRFHELRKEVKREKKLVRK-----EDERAPTLAELTLPEEELRRL 194

Query: 1621 RKVGIELKKKLKVGVAGITEGIVNGIHERWRRSEVVKIKCEDLSKLNMKRTHDLLERKTG 1442
            + +GI+++KKLKVG AGITEGIVNGIHERWRR+EVVKI+CED+ KLNMKRTHD+LERKTG
Sbjct: 195  KGIGIQIRKKLKVGKAGITEGIVNGIHERWRRAEVVKIRCEDICKLNMKRTHDILERKTG 254

Query: 1441 GLVVWRSGSIIILYRGANYVYPYFLXXXXXXXNL-------------------VCTD--- 1328
            GLV+WRSGS IILYRGANY YPYFL       +                    VC+    
Sbjct: 255  GLVIWRSGSYIILYRGANYKYPYFLSDNNLPNDSSHDASSDSQMNNEEHDGKEVCSSGKG 314

Query: 1327 SVKSGLPIVSNREAGKALVKGVGSPNKVRFLLPGEAQILEEADRMLDGLGPRFIDWWGVE 1148
             VKS  P+ +N+ A  +L++GVG P +VRF LPGEAQ+ EEADR+LDGLGPRF DWWG +
Sbjct: 315  DVKSAGPMPANKIAPLSLIQGVGYPTRVRFQLPGEAQLEEEADRLLDGLGPRFTDWWGYD 374

Query: 1147 PLPIDADLLPAIVPGYRRPFRLLPYGIKPKLTDDEMTILRRLGRPLPCHFALGRNKNLQG 968
            PLPIDADLLPA+VPGYRRPFRLLPYG+KPKLT+DEMT+LRRLGRPLPCHFALGRN+ LQG
Sbjct: 375  PLPIDADLLPAVVPGYRRPFRLLPYGLKPKLTNDEMTVLRRLGRPLPCHFALGRNRKLQG 434

Query: 967  LAASIVKLWEKCEIAKIAVKRGVQNTNSLMMAEELKRLTGGTLLSRDKEFIALYRGKDFL 788
            LAAS++KLWEKCEIAKIAVKRGVQNTNS MMAEELK LTGGTLLSRD+EFI  YRGKDFL
Sbjct: 435  LAASMIKLWEKCEIAKIAVKRGVQNTNSEMMAEELKNLTGGTLLSRDREFIVFYRGKDFL 494

Query: 787  PPAVSTAIEDRRKPRIHRDKHTTHGH------SSTEISPSLASKAENSTSAGEFHEKSVR 626
            PPAVS+AIE RRK  IHR K     H        +E+  S  +  ++     +    S+ 
Sbjct: 495  PPAVSSAIEARRKYGIHRGKQKIDHHRLAINAEESELGTSEHASDKDCDGTDDQKTNSLS 554

Query: 625  KERKPKSTNAVMENTSSKLFTVXXXXXXXXXXXXXXXXXXXAREPEVDREGVTEEERYML 446
            K R  +S  AV+E T+ KL                       ++PE+D+EG+TEEERYML
Sbjct: 555  KRRMLRSAEAVVERTNIKLSMALEKKERAEKLLAELEEAQIPQQPEIDKEGITEEERYML 614

Query: 445  KKVGLRMKPFLLLGRRGVFDGTIENMHLHWKYRELVKIMASARGREDVYGVAKTLEAESG 266
            +KVGLRMKPFLLLGRRG+FDGT+ENMHLHWKYRELVKI+++ R  ED++GVA+TLEAESG
Sbjct: 615  RKVGLRMKPFLLLGRRGIFDGTVENMHLHWKYRELVKIISNGRSIEDIHGVARTLEAESG 674

Query: 265  GILVAVERVDRGYAIIVYRGKNYQRPADLRPQTLLNKKQAMKRSLEAQRCESLKLHVLKL 86
            GILVAVERV +GYAII+YRGKNY+RPA LRPQTLLNK++A+KRSLEAQR ESLKLHVL+L
Sbjct: 675  GILVAVERVSKGYAIIMYRGKNYKRPASLRPQTLLNKREALKRSLEAQRRESLKLHVLRL 734

Query: 85   AQNIDD 68
             +NID+
Sbjct: 735  TRNIDE 740


>emb|CBI34982.3| unnamed protein product [Vitis vinifera]
          Length = 1028

 Score =  824 bits (2129), Expect = 0.0
 Identities = 436/726 (60%), Positives = 521/726 (71%), Gaps = 31/726 (4%)
 Frame = -1

Query: 2152 MLLHQYHLSSPFPINTLNSSQNLFLFSKSNKTSPNFSKPFVTNSSNTSITTKAETVSKTA 1973
            + L ++H   P P  T  SS      S     +P  SK F+  +SN      A+T+ KTA
Sbjct: 27   LTLCRHHSPFPSPTPTFTSSPPSISPSTFKTLNPKPSK-FILRASNPD----AQTLPKTA 81

Query: 1972 IERIAEKLRNLGYI---EENKENPEHKINNHTGTAGEIFLPFTQNLPKQRVGYTIDTSWS 1802
            I+RIAEKLR+LGY+   E  K     K  N  G+AGEIF+P    LPK RVG+TID SWS
Sbjct: 82   IQRIAEKLRSLGYVDGDESRKVLSSDKPAN--GSAGEIFVPLPNQLPKHRVGHTIDQSWS 139

Query: 1801 TPENPVPRPGSGNAISRFXXXXXXXXXXXXXXXXXXXKLREEKVPTLAELTIPQHELRRI 1622
             PENPVP PG+G  I+RF                      +E+ PTLAELT+P+ ELRR+
Sbjct: 140  LPENPVPEPGTGGVITRFHELRKEVKREKKLVRK-----EDERAPTLAELTLPEEELRRL 194

Query: 1621 RKVGIELKKKLKVGVAGITEGIVNGIHERWRRSEVVKIKCEDLSKLNMKRTHDLLERKTG 1442
            + +GI+++KKLKVG AGITEGIVNGIHERWRR+EVVKI+CED+ KLNMKRTHD+LERKTG
Sbjct: 195  KGIGIQIRKKLKVGKAGITEGIVNGIHERWRRAEVVKIRCEDICKLNMKRTHDILERKTG 254

Query: 1441 GLVVWRSGSIIILYRGANYVYPYFLXXXXXXXNL-------------------VCTD--- 1328
            GLV+WRSGS IILYRGANY YPYFL       +                    VC+    
Sbjct: 255  GLVIWRSGSYIILYRGANYKYPYFLSDNNLPNDSSHDASSDSQMNNEEHDGKEVCSSGKG 314

Query: 1327 SVKSGLPIVSNREAGKALVKGVGSPNKVRFLLPGEAQILEEADRMLDGLGPRFIDWWGVE 1148
             VKS  P+ +N+ A  +L++GVG P +VRF LPGEAQ+ EEADR+LDGLGPRF DWWG +
Sbjct: 315  DVKSAGPMPANKIAPLSLIQGVGYPTRVRFQLPGEAQLEEEADRLLDGLGPRFTDWWGYD 374

Query: 1147 PLPIDADLLPAIVPGYRRPFRLLPYGIKPKLTDDEMTILRRLGRPLPCHFALGRNKNLQG 968
            PLPIDADLLPA+VPGYRRPFRLLPYG+KPKLT+DEMT+LRRLGRPLPCHFALGRN+ LQG
Sbjct: 375  PLPIDADLLPAVVPGYRRPFRLLPYGLKPKLTNDEMTVLRRLGRPLPCHFALGRNRKLQG 434

Query: 967  LAASIVKLWEKCEIAKIAVKRGVQNTNSLMMAEELKRLTGGTLLSRDKEFIALYRGKDFL 788
            LAAS++KLWEKCEIAKIAVKRGVQNTNS MMAEELK LTGGTLLSRD+EFI  YRGKDFL
Sbjct: 435  LAASMIKLWEKCEIAKIAVKRGVQNTNSEMMAEELKNLTGGTLLSRDREFIVFYRGKDFL 494

Query: 787  PPAVSTAIEDRRKPRIHRDKHTTHGH------SSTEISPSLASKAENSTSAGEFHEKSVR 626
            PPAVS+AIE RRK  IHR K     H        +E+  S  +  ++     +    S+ 
Sbjct: 495  PPAVSSAIEARRKYGIHRGKQKIDHHRLAINAEESELGTSEHASDKDCDGTDDQKTNSLS 554

Query: 625  KERKPKSTNAVMENTSSKLFTVXXXXXXXXXXXXXXXXXXXAREPEVDREGVTEEERYML 446
            K R  +S  AV+E T+ KL                       ++PE+D+EG+TEEERYML
Sbjct: 555  KRRMLRSAEAVVERTNIKLSMALEKKERAEKLLAELEEAQIPQQPEIDKEGITEEERYML 614

Query: 445  KKVGLRMKPFLLLGRRGVFDGTIENMHLHWKYRELVKIMASARGREDVYGVAKTLEAESG 266
            +KVGLRMKPFLLLGRRG+FDGT+ENMHLHWKYRELVKI+++ R  ED++GVA+TLEAESG
Sbjct: 615  RKVGLRMKPFLLLGRRGIFDGTVENMHLHWKYRELVKIISNGRSIEDIHGVARTLEAESG 674

Query: 265  GILVAVERVDRGYAIIVYRGKNYQRPADLRPQTLLNKKQAMKRSLEAQRCESLKLHVLKL 86
            GILVAVERV +GYAII+YRGKNY+RPA LRPQTLLNK++A+KRSLEAQR ESLKLHVL+L
Sbjct: 675  GILVAVERVSKGYAIIMYRGKNYKRPASLRPQTLLNKREALKRSLEAQRRESLKLHVLRL 734

Query: 85   AQNIDD 68
             +NID+
Sbjct: 735  TRNIDE 740


>ref|XP_002275511.1| PREDICTED: chloroplastic group IIA intron splicing facilitator CRS1,
            chloroplastic isoform X1 [Vitis vinifera]
            gi|731419290|ref|XP_010660972.1| PREDICTED: chloroplastic
            group IIA intron splicing facilitator CRS1, chloroplastic
            isoform X1 [Vitis vinifera]
          Length = 1044

 Score =  824 bits (2129), Expect = 0.0
 Identities = 436/726 (60%), Positives = 521/726 (71%), Gaps = 31/726 (4%)
 Frame = -1

Query: 2152 MLLHQYHLSSPFPINTLNSSQNLFLFSKSNKTSPNFSKPFVTNSSNTSITTKAETVSKTA 1973
            + L ++H   P P  T  SS      S     +P  SK F+  +SN      A+T+ KTA
Sbjct: 27   LTLCRHHSPFPSPTPTFTSSPPSISPSTFKTLNPKPSK-FILRASNPD----AQTLPKTA 81

Query: 1972 IERIAEKLRNLGYI---EENKENPEHKINNHTGTAGEIFLPFTQNLPKQRVGYTIDTSWS 1802
            I+RIAEKLR+LGY+   E  K     K  N  G+AGEIF+P    LPK RVG+TID SWS
Sbjct: 82   IQRIAEKLRSLGYVDGDESRKVLSSDKPAN--GSAGEIFVPLPNQLPKHRVGHTIDQSWS 139

Query: 1801 TPENPVPRPGSGNAISRFXXXXXXXXXXXXXXXXXXXKLREEKVPTLAELTIPQHELRRI 1622
             PENPVP PG+G  I+RF                      +E+ PTLAELT+P+ ELRR+
Sbjct: 140  LPENPVPEPGTGGVITRFHELRKEVKREKKLVRK-----EDERAPTLAELTLPEEELRRL 194

Query: 1621 RKVGIELKKKLKVGVAGITEGIVNGIHERWRRSEVVKIKCEDLSKLNMKRTHDLLERKTG 1442
            + +GI+++KKLKVG AGITEGIVNGIHERWRR+EVVKI+CED+ KLNMKRTHD+LERKTG
Sbjct: 195  KGIGIQIRKKLKVGKAGITEGIVNGIHERWRRAEVVKIRCEDICKLNMKRTHDILERKTG 254

Query: 1441 GLVVWRSGSIIILYRGANYVYPYFLXXXXXXXNL-------------------VCTD--- 1328
            GLV+WRSGS IILYRGANY YPYFL       +                    VC+    
Sbjct: 255  GLVIWRSGSYIILYRGANYKYPYFLSDNNLPNDSSHDASSDSQMNNEEHDGKEVCSSGKG 314

Query: 1327 SVKSGLPIVSNREAGKALVKGVGSPNKVRFLLPGEAQILEEADRMLDGLGPRFIDWWGVE 1148
             VKS  P+ +N+ A  +L++GVG P +VRF LPGEAQ+ EEADR+LDGLGPRF DWWG +
Sbjct: 315  DVKSAGPMPANKIAPLSLIQGVGYPTRVRFQLPGEAQLEEEADRLLDGLGPRFTDWWGYD 374

Query: 1147 PLPIDADLLPAIVPGYRRPFRLLPYGIKPKLTDDEMTILRRLGRPLPCHFALGRNKNLQG 968
            PLPIDADLLPA+VPGYRRPFRLLPYG+KPKLT+DEMT+LRRLGRPLPCHFALGRN+ LQG
Sbjct: 375  PLPIDADLLPAVVPGYRRPFRLLPYGLKPKLTNDEMTVLRRLGRPLPCHFALGRNRKLQG 434

Query: 967  LAASIVKLWEKCEIAKIAVKRGVQNTNSLMMAEELKRLTGGTLLSRDKEFIALYRGKDFL 788
            LAAS++KLWEKCEIAKIAVKRGVQNTNS MMAEELK LTGGTLLSRD+EFI  YRGKDFL
Sbjct: 435  LAASMIKLWEKCEIAKIAVKRGVQNTNSEMMAEELKNLTGGTLLSRDREFIVFYRGKDFL 494

Query: 787  PPAVSTAIEDRRKPRIHRDKHTTHGH------SSTEISPSLASKAENSTSAGEFHEKSVR 626
            PPAVS+AIE RRK  IHR K     H        +E+  S  +  ++     +    S+ 
Sbjct: 495  PPAVSSAIEARRKYGIHRGKQKIDHHRLAINAEESELGTSEHASDKDCDGTDDQKTNSLS 554

Query: 625  KERKPKSTNAVMENTSSKLFTVXXXXXXXXXXXXXXXXXXXAREPEVDREGVTEEERYML 446
            K R  +S  AV+E T+ KL                       ++PE+D+EG+TEEERYML
Sbjct: 555  KRRMLRSAEAVVERTNIKLSMALEKKERAEKLLAELEEAQIPQQPEIDKEGITEEERYML 614

Query: 445  KKVGLRMKPFLLLGRRGVFDGTIENMHLHWKYRELVKIMASARGREDVYGVAKTLEAESG 266
            +KVGLRMKPFLLLGRRG+FDGT+ENMHLHWKYRELVKI+++ R  ED++GVA+TLEAESG
Sbjct: 615  RKVGLRMKPFLLLGRRGIFDGTVENMHLHWKYRELVKIISNGRSIEDIHGVARTLEAESG 674

Query: 265  GILVAVERVDRGYAIIVYRGKNYQRPADLRPQTLLNKKQAMKRSLEAQRCESLKLHVLKL 86
            GILVAVERV +GYAII+YRGKNY+RPA LRPQTLLNK++A+KRSLEAQR ESLKLHVL+L
Sbjct: 675  GILVAVERVSKGYAIIMYRGKNYKRPASLRPQTLLNKREALKRSLEAQRRESLKLHVLRL 734

Query: 85   AQNIDD 68
             +NID+
Sbjct: 735  TRNIDE 740


>ref|XP_007217083.1| hypothetical protein PRUPE_ppa000515mg [Prunus persica]
            gi|462413233|gb|EMJ18282.1| hypothetical protein
            PRUPE_ppa000515mg [Prunus persica]
          Length = 1117

 Score =  807 bits (2084), Expect = 0.0
 Identities = 445/723 (61%), Positives = 523/723 (72%), Gaps = 28/723 (3%)
 Frame = -1

Query: 2152 MLLHQYHL-SSPFPINTLNSSQNLFLFSKSNKTSPNFS-KP--FVTNSSNTSITTKAETV 1985
            MLL   HL +SPFP   L + Q+L  F    KT P+ + KP  F   SS T   T A   
Sbjct: 1    MLLPLTHLPASPFPPKIL-TDQSLSPFFSFPKTLPSQNPKPSKFAIRSSTTGTKTLAP-- 57

Query: 1984 SKTAIERIAEKLRNLGYIEENKENPEHKINNHTGTAGEIFLPFTQNLPKQRVGYTIDTSW 1805
             K+AI+RIAEKLR+LG+ E N E P+ + +  T  AGEIF+P  Q LPK RVG+T+D+SW
Sbjct: 58   -KSAIQRIAEKLRSLGFTENN-EKPQPQPD--TKYAGEIFVPLPQRLPKYRVGHTLDSSW 113

Query: 1804 STPENPVPRPGSGNAISRFXXXXXXXXXXXXXXXXXXXKLREEKVPTLAELTIPQHELRR 1625
            STPENPVP PG+G AI+RF                     +EE+VPTLAEL++ + ELRR
Sbjct: 114  STPENPVPEPGTGRAIARFHELRREVKKQKELEKTGK---KEERVPTLAELSLGKGELRR 170

Query: 1624 IRKVGIELKKKLKVGVAGITEGIVNGIHERWRRSEVVKIKCEDLSKLNMKRTHDLLERKT 1445
            +  VGI L+KKLK+G AGITEGIVNGIHE WRRSEVVKI CEDL ++NMKRTHD+LERKT
Sbjct: 171  LTTVGIGLRKKLKIGKAGITEGIVNGIHENWRRSEVVKIVCEDLCRMNMKRTHDMLERKT 230

Query: 1444 GGLVVWRSGSIIILYRGANYVYPYFLXXXXXXXNLVCT------------------DSVK 1319
            GGLVVWRSGS I+LYRG NY YPYFL       + + T                  + V 
Sbjct: 231  GGLVVWRSGSKIVLYRGVNYKYPYFLRDKVDEDSTIDTSHNALPDAHINDGINEISNEVN 290

Query: 1318 SGL-PIVSNREAGKALVKGVGSPNKVRFLLPGEAQILEEADRMLDGLGPRFIDWWGVEPL 1142
            S + P  +N  A   LVKGVG  ++VRF LPGEAQ+ EEAD ML+GLGPRF DWWG EPL
Sbjct: 291  SAIIPSTTNERAQPMLVKGVGLQDRVRFQLPGEAQLTEEADHMLEGLGPRFTDWWGYEPL 350

Query: 1141 PIDADLLPAIVPGYRRPFRLLPYGIKPKLTDDEMTILRRLGRPLPCHFALGRNKNLQGLA 962
            P+DADLLPAIVPGYR+PFRLLPYG+KPKLTDDEMT +RRLGRPLPCHFALGRN+NLQGLA
Sbjct: 351  PVDADLLPAIVPGYRKPFRLLPYGLKPKLTDDEMTTIRRLGRPLPCHFALGRNRNLQGLA 410

Query: 961  ASIVKLWEKCEIAKIAVKRGVQNTNSLMMAEELKRLTGGTLLSRDKEFIALYRGKDFLPP 782
            +SIVKLWEKCEIAKIAVKRGVQNTN+ +MAEELKRLTGGTLL+RD+EFI LYRGKDFLPP
Sbjct: 411  SSIVKLWEKCEIAKIAVKRGVQNTNTEIMAEELKRLTGGTLLARDREFIVLYRGKDFLPP 470

Query: 781  AVSTAIEDRRKPRIHRDKH-TTHGHSST---EISPSLASKAENSTSAGEFHEKSV-RKER 617
            AVS+AIE+RRK  IH +K    HG S T   E+ P   ++ EN       H+  +   +R
Sbjct: 471  AVSSAIEERRKYAIHAEKQIAEHGTSVTTRQELEP--RTEPENKHEWTNDHKMGLPSAKR 528

Query: 616  KPKSTNAVMENTSSKLFTVXXXXXXXXXXXXXXXXXXXAREPEVDREGVTEEERYMLKKV 437
            K KS   V+  TS KL                       ++PE+D+EG+T+EERYML+KV
Sbjct: 529  KLKSAEVVVNRTSIKLSMALEKKAKAEKLLAELENAAIPQQPEIDKEGITKEERYMLRKV 588

Query: 436  GLRMKPFLLLGRRGVFDGTIENMHLHWKYRELVKIMASARGREDVYGVAKTLEAESGGIL 257
            GLRMKPFLL+GRRGVFDGTIENMHLHWKYRELVKI+ + +  E V  VA+TLEAESGGIL
Sbjct: 589  GLRMKPFLLMGRRGVFDGTIENMHLHWKYRELVKIICNEKSIEAVQQVAQTLEAESGGIL 648

Query: 256  VAVERVDRGYAIIVYRGKNYQRPADLRPQTLLNKKQAMKRSLEAQRCESLKLHVLKLAQN 77
            VAVERV +GYAIIVYRGKNY RPA LRPQTLLNK++AMKRS+EAQR ESLKLHVL+L +N
Sbjct: 649  VAVERVSKGYAIIVYRGKNYSRPASLRPQTLLNKREAMKRSIEAQRRESLKLHVLRLNEN 708

Query: 76   IDD 68
            ID+
Sbjct: 709  IDE 711


>ref|XP_008230671.1| PREDICTED: chloroplastic group IIA intron splicing facilitator CRS1,
            chloroplastic isoform X2 [Prunus mume]
          Length = 1109

 Score =  802 bits (2072), Expect = 0.0
 Identities = 438/721 (60%), Positives = 514/721 (71%), Gaps = 26/721 (3%)
 Frame = -1

Query: 2152 MLLHQYHL-SSPFPINTLNSSQNLFLFSKSNKTSPNFS-KP--FVTNSSNTSITTKAETV 1985
            MLL   HL +SPFP   L + Q+L  F    KT P+ + KP  F   SS T   T A   
Sbjct: 1    MLLPLTHLPASPFPPKIL-TDQSLSPFFSFPKTLPSQNPKPSKFAIRSSTTGTKTLAP-- 57

Query: 1984 SKTAIERIAEKLRNLGYIEENKENPEHKINNHTGTAGEIFLPFTQNLPKQRVGYTIDTSW 1805
             K+AI+RIAEKLR+LG+ E N++        H   AGEIF+P  Q LPK RVG+T+D+SW
Sbjct: 58   -KSAIQRIAEKLRSLGFTENNEKPQPQPDTKH---AGEIFVPLPQRLPKYRVGHTLDSSW 113

Query: 1804 STPENPVPRPGSGNAISRFXXXXXXXXXXXXXXXXXXXKLREEKVPTLAELTIPQHELRR 1625
            STPENPVP PG+G AI+RF                     +EE+VPTLAEL++ + ELRR
Sbjct: 114  STPENPVPEPGTGRAIARFHELRREVKKQKELEKTGK---KEERVPTLAELSLGKGELRR 170

Query: 1624 IRKVGIELKKKLKVGVAGITEGIVNGIHERWRRSEVVKIKCEDLSKLNMKRTHDLLERKT 1445
            +  VGI L+KKLK+G AGITEGIVNGIHE WRRSEVVKI CEDL ++NMKRTHD+LERKT
Sbjct: 171  LTTVGIGLRKKLKIGKAGITEGIVNGIHENWRRSEVVKIVCEDLCRMNMKRTHDMLERKT 230

Query: 1444 GGLVVWRSGSIIILYRGANYVYPYFLXXXXXXXNLVCTDS-------VKSGL-------- 1310
            GGLVVWRSGS I+LYRG NY YPYFL       + + T         +  G+        
Sbjct: 231  GGLVVWRSGSKIVLYRGVNYKYPYFLHDKVDEDSTIDTSHNVLPDARINDGINEISNEVD 290

Query: 1309 ----PIVSNREAGKALVKGVGSPNKVRFLLPGEAQILEEADRMLDGLGPRFIDWWGVEPL 1142
                P  +N  A   LVKGVG  ++VRF LPGEAQ+ EEADRML+GLGPRF DWWG EPL
Sbjct: 291  SAIIPSTTNERAQPMLVKGVGLQDRVRFQLPGEAQLTEEADRMLEGLGPRFTDWWGYEPL 350

Query: 1141 PIDADLLPAIVPGYRRPFRLLPYGIKPKLTDDEMTILRRLGRPLPCHFALGRNKNLQGLA 962
            P+DADLLPAIVPGYR+PFRLLPYG+KPKLTDDEMT +RRLGRPLPCHFALGRN+NLQGLA
Sbjct: 351  PVDADLLPAIVPGYRKPFRLLPYGLKPKLTDDEMTTIRRLGRPLPCHFALGRNRNLQGLA 410

Query: 961  ASIVKLWEKCEIAKIAVKRGVQNTNSLMMAEELKRLTGGTLLSRDKEFIALYRGKDFLPP 782
            +SIVKLWEKCEIAKIAVKRGVQNTN+ +MAEELKRLTGGTLL+RD+EFI LYRGKDFLP 
Sbjct: 411  SSIVKLWEKCEIAKIAVKRGVQNTNTEIMAEELKRLTGGTLLARDREFIVLYRGKDFLPS 470

Query: 781  AVSTAIEDRRKPRIHRDKHTTHGHSSTEISPSL--ASKAENSTSAGEFHEKSV-RKERKP 611
            AVS+AIE+RRK  IH +K      +S      L   ++ EN       H+  +   +RK 
Sbjct: 471  AVSSAIEERRKYAIHAEKQIAERGTSVTTRQELEPRTEPENKHEWTNDHKMGLPSAKRKL 530

Query: 610  KSTNAVMENTSSKLFTVXXXXXXXXXXXXXXXXXXXAREPEVDREGVTEEERYMLKKVGL 431
            KS   V+  TS KL                       ++PE D+EG+T+EERYML+KVGL
Sbjct: 531  KSAEVVVNRTSIKLSMALEKKAKAEKLLAELENAAIPQQPETDKEGITKEERYMLRKVGL 590

Query: 430  RMKPFLLLGRRGVFDGTIENMHLHWKYRELVKIMASARGREDVYGVAKTLEAESGGILVA 251
            RMKPFLL+GRRGVFDGTIENMHLHWKYRELVKI+ + +  E V  VA+TLEAESGGILVA
Sbjct: 591  RMKPFLLMGRRGVFDGTIENMHLHWKYRELVKIICNEKSIEAVQQVAQTLEAESGGILVA 650

Query: 250  VERVDRGYAIIVYRGKNYQRPADLRPQTLLNKKQAMKRSLEAQRCESLKLHVLKLAQNID 71
            VERV +GYAIIVYRGKNY RPA LRPQTLLNK++AMKRS+EAQR ESLKLHVL+L +NID
Sbjct: 651  VERVSKGYAIIVYRGKNYSRPASLRPQTLLNKREAMKRSIEAQRRESLKLHVLRLNENID 710

Query: 70   D 68
            +
Sbjct: 711  E 711


>ref|XP_008230670.1| PREDICTED: chloroplastic group IIA intron splicing facilitator CRS1,
            chloroplastic isoform X1 [Prunus mume]
          Length = 1122

 Score =  802 bits (2072), Expect = 0.0
 Identities = 438/721 (60%), Positives = 514/721 (71%), Gaps = 26/721 (3%)
 Frame = -1

Query: 2152 MLLHQYHL-SSPFPINTLNSSQNLFLFSKSNKTSPNFS-KP--FVTNSSNTSITTKAETV 1985
            MLL   HL +SPFP   L + Q+L  F    KT P+ + KP  F   SS T   T A   
Sbjct: 1    MLLPLTHLPASPFPPKIL-TDQSLSPFFSFPKTLPSQNPKPSKFAIRSSTTGTKTLAP-- 57

Query: 1984 SKTAIERIAEKLRNLGYIEENKENPEHKINNHTGTAGEIFLPFTQNLPKQRVGYTIDTSW 1805
             K+AI+RIAEKLR+LG+ E N++        H   AGEIF+P  Q LPK RVG+T+D+SW
Sbjct: 58   -KSAIQRIAEKLRSLGFTENNEKPQPQPDTKH---AGEIFVPLPQRLPKYRVGHTLDSSW 113

Query: 1804 STPENPVPRPGSGNAISRFXXXXXXXXXXXXXXXXXXXKLREEKVPTLAELTIPQHELRR 1625
            STPENPVP PG+G AI+RF                     +EE+VPTLAEL++ + ELRR
Sbjct: 114  STPENPVPEPGTGRAIARFHELRREVKKQKELEKTGK---KEERVPTLAELSLGKGELRR 170

Query: 1624 IRKVGIELKKKLKVGVAGITEGIVNGIHERWRRSEVVKIKCEDLSKLNMKRTHDLLERKT 1445
            +  VGI L+KKLK+G AGITEGIVNGIHE WRRSEVVKI CEDL ++NMKRTHD+LERKT
Sbjct: 171  LTTVGIGLRKKLKIGKAGITEGIVNGIHENWRRSEVVKIVCEDLCRMNMKRTHDMLERKT 230

Query: 1444 GGLVVWRSGSIIILYRGANYVYPYFLXXXXXXXNLVCTDS-------VKSGL-------- 1310
            GGLVVWRSGS I+LYRG NY YPYFL       + + T         +  G+        
Sbjct: 231  GGLVVWRSGSKIVLYRGVNYKYPYFLHDKVDEDSTIDTSHNVLPDARINDGINEISNEVD 290

Query: 1309 ----PIVSNREAGKALVKGVGSPNKVRFLLPGEAQILEEADRMLDGLGPRFIDWWGVEPL 1142
                P  +N  A   LVKGVG  ++VRF LPGEAQ+ EEADRML+GLGPRF DWWG EPL
Sbjct: 291  SAIIPSTTNERAQPMLVKGVGLQDRVRFQLPGEAQLTEEADRMLEGLGPRFTDWWGYEPL 350

Query: 1141 PIDADLLPAIVPGYRRPFRLLPYGIKPKLTDDEMTILRRLGRPLPCHFALGRNKNLQGLA 962
            P+DADLLPAIVPGYR+PFRLLPYG+KPKLTDDEMT +RRLGRPLPCHFALGRN+NLQGLA
Sbjct: 351  PVDADLLPAIVPGYRKPFRLLPYGLKPKLTDDEMTTIRRLGRPLPCHFALGRNRNLQGLA 410

Query: 961  ASIVKLWEKCEIAKIAVKRGVQNTNSLMMAEELKRLTGGTLLSRDKEFIALYRGKDFLPP 782
            +SIVKLWEKCEIAKIAVKRGVQNTN+ +MAEELKRLTGGTLL+RD+EFI LYRGKDFLP 
Sbjct: 411  SSIVKLWEKCEIAKIAVKRGVQNTNTEIMAEELKRLTGGTLLARDREFIVLYRGKDFLPS 470

Query: 781  AVSTAIEDRRKPRIHRDKHTTHGHSSTEISPSL--ASKAENSTSAGEFHEKSV-RKERKP 611
            AVS+AIE+RRK  IH +K      +S      L   ++ EN       H+  +   +RK 
Sbjct: 471  AVSSAIEERRKYAIHAEKQIAERGTSVTTRQELEPRTEPENKHEWTNDHKMGLPSAKRKL 530

Query: 610  KSTNAVMENTSSKLFTVXXXXXXXXXXXXXXXXXXXAREPEVDREGVTEEERYMLKKVGL 431
            KS   V+  TS KL                       ++PE D+EG+T+EERYML+KVGL
Sbjct: 531  KSAEVVVNRTSIKLSMALEKKAKAEKLLAELENAAIPQQPETDKEGITKEERYMLRKVGL 590

Query: 430  RMKPFLLLGRRGVFDGTIENMHLHWKYRELVKIMASARGREDVYGVAKTLEAESGGILVA 251
            RMKPFLL+GRRGVFDGTIENMHLHWKYRELVKI+ + +  E V  VA+TLEAESGGILVA
Sbjct: 591  RMKPFLLMGRRGVFDGTIENMHLHWKYRELVKIICNEKSIEAVQQVAQTLEAESGGILVA 650

Query: 250  VERVDRGYAIIVYRGKNYQRPADLRPQTLLNKKQAMKRSLEAQRCESLKLHVLKLAQNID 71
            VERV +GYAIIVYRGKNY RPA LRPQTLLNK++AMKRS+EAQR ESLKLHVL+L +NID
Sbjct: 651  VERVSKGYAIIVYRGKNYSRPASLRPQTLLNKREAMKRSIEAQRRESLKLHVLRLNENID 710

Query: 70   D 68
            +
Sbjct: 711  E 711


>ref|XP_010255197.1| PREDICTED: chloroplastic group IIA intron splicing facilitator CRS1,
            chloroplastic [Nelumbo nucifera]
          Length = 1034

 Score =  801 bits (2069), Expect = 0.0
 Identities = 433/713 (60%), Positives = 504/713 (70%), Gaps = 19/713 (2%)
 Frame = -1

Query: 2152 MLLHQYHLSSPFPINTLNSSQNLFLFSKSNKTSPNFSKPFVTNSSNTSITTKAETVSKTA 1973
            MLL  YHL   F   TL+S+  LF  S S K    F  P        S      TVSKTA
Sbjct: 1    MLLPPYHLIPSFSTKTLDSAP-LFFPSPSPKILI-FQNPKPPKFLLQSYAADVRTVSKTA 58

Query: 1972 IERIAEKLRNLGYIEENKENPEHKINNHTGTAGEIFLPFTQNLPKQRVGYTIDTSWSTPE 1793
            I+RI+EKLR+LGY+E+N    +    NH G+AGEIF+PF+  LPK RVGYTID+SWSTPE
Sbjct: 59   IQRISEKLRSLGYLEDNSRESQQPETNH-GSAGEIFIPFSHELPKYRVGYTIDSSWSTPE 117

Query: 1792 NPVPRPGSGNAISRFXXXXXXXXXXXXXXXXXXXKLREEKVPTLAELTIPQHELRRIRKV 1613
            NPVP PGSG A+SRF                     +EE+ PTLAELTIP+ EL+R+  +
Sbjct: 118  NPVPHPGSGAALSRFQELKRKVEKQKRSTK------KEERAPTLAELTIPEQELKRLITI 171

Query: 1612 GIELKKKLKVGVAGITEGIVNGIHERWRRSEVVKIKCEDLSKLNMKRTHDLLERKTGGLV 1433
            GI LKKKLKVG AGITEGIVNGIHERWRRSE+VKI+ EDL  +NMKRTHD+LERKTGGLV
Sbjct: 172  GIGLKKKLKVGKAGITEGIVNGIHERWRRSELVKIRFEDLCSMNMKRTHDILERKTGGLV 231

Query: 1432 VWRSGSIIILYRGANYVYPYFLXXXXXXXNLVCTDS--------------VKSGLPIVSN 1295
            VWRSGS IILYRGANY YPYF        +   T+S               +S     SN
Sbjct: 232  VWRSGSTIILYRGANYEYPYFKANKNTASDTSNTNSGGDGGSTNSLHKVDKESAQTGQSN 291

Query: 1294 REAGKALVKGVGSPNKVRFLLPGEAQILEEADRMLDGLGPRFIDWWGVEPLPIDADLLPA 1115
              A   LV GVGSP+KVRF L GE +  EEAD +LDGLGPRF DWWG +PLP+DADLLPA
Sbjct: 292  GIACPPLVHGVGSPDKVRFQLQGEIEFAEEADCLLDGLGPRFTDWWGYDPLPVDADLLPA 351

Query: 1114 IVPGYRRPFRLLPYGIKPKLTDDEMTILRRLGRPLPCHFALGRNKNLQGLAASIVKLWEK 935
            +VPGYR+PFRLLPYGI+PKLT+DEMTILRRL RPLPCHFALGRN+ LQGLA S+VKLWEK
Sbjct: 352  VVPGYRKPFRLLPYGIQPKLTNDEMTILRRLSRPLPCHFALGRNRKLQGLAVSMVKLWEK 411

Query: 934  CEIAKIAVKRGVQNTNSLMMAEELKRLTGGTLLSRDKEFIALYRGKDFLPPAVSTAIEDR 755
            CEIAKIAVKRGVQNTNS +MAEELKRLTGG LLSRD EFI  YRGKDFLPP+VSTAIE+R
Sbjct: 412  CEIAKIAVKRGVQNTNSELMAEELKRLTGGILLSRDVEFIVFYRGKDFLPPSVSTAIEER 471

Query: 754  RKPRIHRDKHTTHGHSSTEISPSLASKAENSTSAGEF-----HEKSVRKERKPKSTNAVM 590
            RK    R K      S  +  P    K     SA +F      ++++  ++  +S+ + +
Sbjct: 472  RKHGTGRSKQRVENSSLIDNMPETDIKTAGHPSANKFEGGYDQKRNLISDKTKESSKSAI 531

Query: 589  ENTSSKLFTVXXXXXXXXXXXXXXXXXXXAREPEVDREGVTEEERYMLKKVGLRMKPFLL 410
               ++KL                       ++ E DREG+TEEERYML+KVGLRMKPFLL
Sbjct: 532  YRITTKLSLALEKKTKAEKLLADLEKAVEPQKQESDREGITEEERYMLRKVGLRMKPFLL 591

Query: 409  LGRRGVFDGTIENMHLHWKYRELVKIMASARGREDVYGVAKTLEAESGGILVAVERVDRG 230
            LGRRGVFDGT+ENMHLHWKYRELVK+++S R  EDV   A+TLEAESGGILVAVERV++G
Sbjct: 592  LGRRGVFDGTVENMHLHWKYRELVKVISSERSIEDVQRTARTLEAESGGILVAVERVNKG 651

Query: 229  YAIIVYRGKNYQRPADLRPQTLLNKKQAMKRSLEAQRCESLKLHVLKLAQNID 71
             AIIVYRGKNYQRP DLRP+TLLNKK AMKRSLEAQR +SLKLH+L+L ++ID
Sbjct: 652  CAIIVYRGKNYQRPVDLRPRTLLNKKAAMKRSLEAQRHKSLKLHILRLTRDID 704


>ref|XP_009614930.1| PREDICTED: chloroplastic group IIA intron splicing facilitator CRS1,
            chloroplastic [Nicotiana tomentosiformis]
          Length = 1051

 Score =  788 bits (2034), Expect = 0.0
 Identities = 414/719 (57%), Positives = 513/719 (71%), Gaps = 27/719 (3%)
 Frame = -1

Query: 2146 LHQYHLSSPFPINTLNSSQNLFLFSKSNKTSPNFSKPFVTNSSNTSITTKAETVS---KT 1976
            L  +H  +P P   L  S +L  FS    T P   KPF + SS     T     S   ++
Sbjct: 5    LCNFHPLNP-PKTLLYPSPSLPFFST---THPLSLKPFFSRSSIPVFATSPNNTSPLPES 60

Query: 1975 AIERIAEKLRNLGYIEENKENPEHKI-------NNHTGTAGEIFLPFTQNLPKQRVGYTI 1817
            AI+RIA KLR+LGYI EN +N E  +       N ++ + G+IF+P    LPK RVG+T+
Sbjct: 61   AIQRIANKLRSLGYITENPKNQETTLEENSLSPNPNSSSPGQIFVPLPNQLPKYRVGHTL 120

Query: 1816 DTSWSTPENPVPRPGSGNAISRFXXXXXXXXXXXXXXXXXXXKLREEKVPTLAELTIPQH 1637
            D SWSTPENPVP PG GN+I +F                     ++E+ P+LAELT+P  
Sbjct: 121  DVSWSTPENPVPHPGLGNSIQKFHELRSNFLKEKEKERLKNKDNKKERAPSLAELTLPAE 180

Query: 1636 ELRRIRKVGIELKKKLKVGVAGITEGIVNGIHERWRRSEVVKIKCEDLSKLNMKRTHDLL 1457
            ELRR+R +GI L+KKLK+G AGITEGIVNGIHERWRR E+VKI CEDL +LNMKRTH+LL
Sbjct: 181  ELRRLRTLGIGLRKKLKIGKAGITEGIVNGIHERWRRIELVKITCEDLCRLNMKRTHELL 240

Query: 1456 ERKTGGLVVWRSGSIIILYRGANYVYPYF--------------LXXXXXXXNLVCTDSVK 1319
            ERKTGGLV+WRSGS IILYRGA+Y YPYF                      N    D++K
Sbjct: 241  ERKTGGLVIWRSGSNIILYRGADYKYPYFSESNSGQDASPDLFTGTEEHMTNSSDMDAIK 300

Query: 1318 SGLPIVSNREAGKALVKGVGSPNKVRFLLPGEAQILEEADRMLDGLGPRFIDWWGVEPLP 1139
            S     S+R++   +++GVGSP++VRF LPGEA++ EEAD++L+GLGPRF DWWG EPLP
Sbjct: 301  SD---ASDRKSPTRVIQGVGSPDRVRFQLPGEAELTEEADKLLEGLGPRFTDWWGCEPLP 357

Query: 1138 IDADLLPAIVPGYRRPFRLLPYGIKPKLTDDEMTILRRLGRPLPCHFALGRNKNLQGLAA 959
            IDAD LPA+VPGY++PFRLLPYG+KPKLT+DEMT L+RLGRPLPCHFALGRN+ LQGLAA
Sbjct: 358  IDADFLPAVVPGYKKPFRLLPYGVKPKLTNDEMTTLKRLGRPLPCHFALGRNRKLQGLAA 417

Query: 958  SIVKLWEKCEIAKIAVKRGVQNTNSLMMAEELKRLTGGTLLSRDKEFIALYRGKDFLPPA 779
            +IVKLWEKCEIAK+AVKRGVQNTNS +MAEELK LTGGTLLSRDKEFI  YRGKDFLP A
Sbjct: 418  AIVKLWEKCEIAKVAVKRGVQNTNSELMAEELKWLTGGTLLSRDKEFIVFYRGKDFLPSA 477

Query: 778  VSTAIEDRRKPRIHRDKHTTHGHS---STEISPSLASKAENSTSAGEFHEKSVRKERKPK 608
            VS+AI +RRK  +  +K ++   S   + E   S A    +   A +  +K V +++K  
Sbjct: 478  VSSAIAERRKQVVEEEKKSSFSSSVANTKERKKSTARSVSDDEHANQNDQKGVHEKKKLT 537

Query: 607  STNAVMENTSSKLFTVXXXXXXXXXXXXXXXXXXXAREPEVDREGVTEEERYMLKKVGLR 428
            S  A ++ T+ KL T                     ++P++D+EG+TEEER+ML+K+GLR
Sbjct: 538  SMEAAIKRTADKLATAIEKKAKAEKLLVELEEDEMPQQPDMDKEGITEEERFMLRKIGLR 597

Query: 427  MKPFLLLGRRGVFDGTIENMHLHWKYRELVKIMASARGREDVYGVAKTLEAESGGILVAV 248
            MKPFLLLGRRGVFDGT+ENMHLHWKYRELVK++   +G E+V  +A+ LEAESGGILVAV
Sbjct: 598  MKPFLLLGRRGVFDGTVENMHLHWKYRELVKVITGRKGIEEVNQIARMLEAESGGILVAV 657

Query: 247  ERVDRGYAIIVYRGKNYQRPADLRPQTLLNKKQAMKRSLEAQRCESLKLHVLKLAQNID 71
            ERV++GYAIIVYRGKNY+RPA LRPQTLL+K++AMKRS+EAQR +SLKLHVLKLAQNI+
Sbjct: 658  ERVNKGYAIIVYRGKNYERPASLRPQTLLSKREAMKRSIEAQRRQSLKLHVLKLAQNIE 716


>ref|XP_009762860.1| PREDICTED: chloroplastic group IIA intron splicing facilitator CRS1,
            chloroplastic [Nicotiana sylvestris]
          Length = 1051

 Score =  785 bits (2027), Expect = 0.0
 Identities = 413/722 (57%), Positives = 519/722 (71%), Gaps = 30/722 (4%)
 Frame = -1

Query: 2146 LHQYHLSSPFPINTLNSSQNLFLFSKSNKTS--PNFSK----PFVTNSSNTSITTKAETV 1985
            L  +H  +P P   L  S +L  FS ++  S  P FS+     F T+ +NTS       +
Sbjct: 5    LCNFHPLNP-PKTLLYPSPSLPFFSTTHPLSLKPFFSRFSIPVFATSPNNTS------PL 57

Query: 1984 SKTAIERIAEKLRNLGYIEENKENPEHKI-------NNHTGTAGEIFLPFTQNLPKQRVG 1826
             ++AI+RIA KLR+LGYI EN +N E  +       N ++ + G+IF+P    LPK RVG
Sbjct: 58   PESAIQRIANKLRSLGYITENPKNQETTLEENSLSPNPNSSSPGQIFVPLPNQLPKYRVG 117

Query: 1825 YTIDTSWSTPENPVPRPGSGNAISRFXXXXXXXXXXXXXXXXXXXKLREEKVPTLAELTI 1646
            +T+D SWSTPENPVP+PG GN+I +F                     ++E+ P+LAELT+
Sbjct: 118  HTLDVSWSTPENPVPQPGLGNSIQKFHELRGNFLKEKEKERLKNKDSKKERAPSLAELTL 177

Query: 1645 PQHELRRIRKVGIELKKKLKVGVAGITEGIVNGIHERWRRSEVVKIKCEDLSKLNMKRTH 1466
            P  ELRR+R +GI L+KKLK+G AGITEGIVNGIHERWRR E+VKI CEDL +LNMKRTH
Sbjct: 178  PDEELRRLRTLGIGLRKKLKIGKAGITEGIVNGIHERWRRIELVKITCEDLCRLNMKRTH 237

Query: 1465 DLLERKTGGLVVWRSGSIIILYRGANYVYPYF--------------LXXXXXXXNLVCTD 1328
            +LLERKTGGLV+WRSGS IILYRGA+Y YPYF                      N    D
Sbjct: 238  ELLERKTGGLVIWRSGSNIILYRGADYKYPYFSESSSRQDASPDLFTGTEEHTTNSSDMD 297

Query: 1327 SVKSGLPIVSNREAGKALVKGVGSPNKVRFLLPGEAQILEEADRMLDGLGPRFIDWWGVE 1148
            ++KS     S+R++   +++GVGSP++VRF LPGEA++ EEAD++L+GLGPRF DWWG E
Sbjct: 298  AIKSD---ASDRKSPTRVIQGVGSPDRVRFQLPGEAELTEEADKLLEGLGPRFTDWWGCE 354

Query: 1147 PLPIDADLLPAIVPGYRRPFRLLPYGIKPKLTDDEMTILRRLGRPLPCHFALGRNKNLQG 968
            PLPIDADLLPA+VPGY++PFRLLPYG+KPKLT+DEMT L+RLGRPLPCHFALGRN+ LQG
Sbjct: 355  PLPIDADLLPAVVPGYKKPFRLLPYGVKPKLTNDEMTTLKRLGRPLPCHFALGRNRKLQG 414

Query: 967  LAASIVKLWEKCEIAKIAVKRGVQNTNSLMMAEELKRLTGGTLLSRDKEFIALYRGKDFL 788
            LAA+IVKLWEKCEIAK+AVKRGVQNTNS +MAEELK LTGGTLLSRDKEFI  YRGKDFL
Sbjct: 415  LAAAIVKLWEKCEIAKVAVKRGVQNTNSELMAEELKWLTGGTLLSRDKEFIVFYRGKDFL 474

Query: 787  PPAVSTAIEDRRKPRIHRDKHTTHGHS---STEISPSLASKAENSTSAGEFHEKSVRKER 617
            P AVS+AI +RRK  +  +K ++   S   + E   S      +   A +  +K V++++
Sbjct: 475  PSAVSSAIAERRKQVVEEEKKSSFSSSVANTKEQKKSTVRSVSDDEHANQNDQKGVQEKK 534

Query: 616  KPKSTNAVMENTSSKLFTVXXXXXXXXXXXXXXXXXXXAREPEVDREGVTEEERYMLKKV 437
            K  S  A ++ T+ KL T                     ++P++D+EG+TEEER+ML+K+
Sbjct: 535  KLTSMEAAIKRTADKLATAIEKKAKAEQLLVELEEDEMPQQPDLDKEGITEEERFMLRKI 594

Query: 436  GLRMKPFLLLGRRGVFDGTIENMHLHWKYRELVKIMASARGREDVYGVAKTLEAESGGIL 257
            GLRMKPFLLLGRRGVFDGT+ENMHLHWKYRELVK++A  +  E+V  +A+ LEAESGGIL
Sbjct: 595  GLRMKPFLLLGRRGVFDGTVENMHLHWKYRELVKVIAGRKSIEEVNQIARMLEAESGGIL 654

Query: 256  VAVERVDRGYAIIVYRGKNYQRPADLRPQTLLNKKQAMKRSLEAQRCESLKLHVLKLAQN 77
            VAVERV++GYAIIVYRGKNY+RPA LRPQTLL+K++AMKRS+EAQR +SLKLHVLKL QN
Sbjct: 655  VAVERVNKGYAIIVYRGKNYERPASLRPQTLLSKREAMKRSIEAQRRQSLKLHVLKLTQN 714

Query: 76   ID 71
            I+
Sbjct: 715  IE 716


>ref|XP_008341495.1| PREDICTED: LOW QUALITY PROTEIN: chloroplastic group IIA intron
            splicing facilitator CRS1, chloroplastic [Malus
            domestica]
          Length = 1090

 Score =  783 bits (2021), Expect = 0.0
 Identities = 429/720 (59%), Positives = 511/720 (70%), Gaps = 27/720 (3%)
 Frame = -1

Query: 2152 MLLHQYHLSS-PFPINTLNSSQNLFLFSKSNKTSPNF---SKPFVTNSSNTSITTKAETV 1985
            M L   HL++  FP  T+    +L  F    +T P+    S  F   SS     T A   
Sbjct: 5    MSLSATHLTTCRFPPKTITDHPSLSPFFSFPRTLPSQNPKSSKFTIRSSAADTKTLAP-- 62

Query: 1984 SKTAIERIAEKLRNLGYIEENKENPEHKINNHTGTAGEIFLPFTQNLPKQRVGYTIDTSW 1805
             K+AI+RIAEKLR+LG+ E   +NP+ + +  +  AGEIF+P  + LPK RVG+T+D SW
Sbjct: 63   -KSAIQRIAEKLRSLGFTEST-QNPDRQPDKKS--AGEIFVPIPEKLPKYRVGHTLDASW 118

Query: 1804 STPENPVPRPGSGNAISRFXXXXXXXXXXXXXXXXXXXKLREEKVPTLAELTIPQHELRR 1625
            STPENPVP PG+G AI+RF                     +  +VPTLAEL++ + ELRR
Sbjct: 119  STPENPVPEPGTGGAIARFHELRREVKKQKELEREERKG-KGGRVPTLAELSLGKGELRR 177

Query: 1624 IRKVGIELKKKLKVGVAGITEGIVNGIHERWRRSEVVKIKCEDLSKLNMKRTHDLLERKT 1445
            +  VG+ L+KKLK+G AGITEGIVNGIHE WRRSEVVKI CEDL +LNMKRTHDLLERKT
Sbjct: 178  LTTVGLGLRKKLKIGKAGITEGIVNGIHENWRRSEVVKIVCEDLCRLNMKRTHDLLERKT 237

Query: 1444 GGLVVWRSGSIIILYRGANYVYPYFLXXXXXXXNLVCTDSV------------KSG---- 1313
            GGLV WR+GS IILYRG NY YPYFL       ++   +S+            +SG    
Sbjct: 238  GGLVXWRAGSKIILYRGVNYKYPYFLRDNVRKDSMSEANSIALPDTHINDGGNESGTSSK 297

Query: 1312 -------LPIVSNREAGKALVKGVGSPNKVRFLLPGEAQILEEADRMLDGLGPRFIDWWG 1154
                   +P  S   A  ALV+GVG P +VRF LPGEAQ+ EE D ML+GLGPRF DWWG
Sbjct: 298  NDVNSAIVPSTSYERAQPALVQGVGLPGRVRFQLPGEAQLSEENDSMLEGLGPRFTDWWG 357

Query: 1153 VEPLPIDADLLPAIVPGYRRPFRLLPYGIKPKLTDDEMTILRRLGRPLPCHFALGRNKNL 974
             EPLPIDADLLPAIVPGYR+PFRLLPYG+  KLTDDEMT +RRLGRPLPCHFALGRN+NL
Sbjct: 358  CEPLPIDADLLPAIVPGYRKPFRLLPYGLNSKLTDDEMTTIRRLGRPLPCHFALGRNRNL 417

Query: 973  QGLAASIVKLWEKCEIAKIAVKRGVQNTNSLMMAEELKRLTGGTLLSRDKEFIALYRGKD 794
            QGLAASIVKLWEKCEIAKIAVKRGVQNTNS MMAEELKRLTGGTLL+RD+EFI LYRGKD
Sbjct: 418  QGLAASIVKLWEKCEIAKIAVKRGVQNTNSEMMAEELKRLTGGTLLARDREFIVLYRGKD 477

Query: 793  FLPPAVSTAIEDRRKPRIHRDKHTTHGHSSTEISPSLASKAENSTSAGEFHEKSVRKERK 614
            FLPPAVS+AIE+RR+  I R + +T   +  ++ P   ++ EN     + H+  +   RK
Sbjct: 478  FLPPAVSSAIEERRRHAI-RVERSTSVPTRQDLEP--RTEPENKHGWIBDHKMGLPSARK 534

Query: 613  PKSTNAVMENTSSKLFTVXXXXXXXXXXXXXXXXXXXAREPEVDREGVTEEERYMLKKVG 434
             KST A ++ TS KL                       ++PE+D+EG+T+EERYML+KVG
Sbjct: 535  LKSTEAAVDRTSIKLSMALEKRVKAEKLLADLENAATPQQPEIDKEGITKEERYMLRKVG 594

Query: 433  LRMKPFLLLGRRGVFDGTIENMHLHWKYRELVKIMASARGREDVYGVAKTLEAESGGILV 254
            LRMKPFLL+GRRGVFDGTIENMHLHWKYRELVKI+++ +  E V+ VA+TLEAESGGILV
Sbjct: 595  LRMKPFLLMGRRGVFDGTIENMHLHWKYRELVKIISNEKSIETVHQVAQTLEAESGGILV 654

Query: 253  AVERVDRGYAIIVYRGKNYQRPADLRPQTLLNKKQAMKRSLEAQRCESLKLHVLKLAQNI 74
            AVERV +GYAIIVYRGKNY RPA LRPQTLL K++AMKRS+EAQR ESLKLHVLKL +NI
Sbjct: 655  AVERVSKGYAIIVYRGKNYSRPASLRPQTLLTKREAMKRSIEAQRRESLKLHVLKLNENI 714


>ref|XP_012082331.1| PREDICTED: chloroplastic group IIA intron splicing facilitator CRS1,
            chloroplastic isoform X3 [Jatropha curcas]
          Length = 1097

 Score =  782 bits (2019), Expect = 0.0
 Identities = 423/730 (57%), Positives = 508/730 (69%), Gaps = 35/730 (4%)
 Frame = -1

Query: 2152 MLLHQYHLSSPFPINTLNS-SQNLFLFSKSN--KTSPNFSKPFVTNSSNTSITTKAETVS 1982
            MLL    L    P  TL+  S +LF  SK+   +   N  KPF+      S T  ++T+ 
Sbjct: 1    MLLSLPRLYPSPPSKTLHKPSSSLFSISKTLILQNPRNPLKPFI----RCSATPDSKTLP 56

Query: 1981 KTAIERIAEKLRNLGYIEENKENPE---HKINNHTGTAGEIFLPFTQNLPKQRVGYTIDT 1811
             +AI+RIA+KLR+LG+ E N + PE    ++   T   GEIF+P    LPK RVG+T+D 
Sbjct: 57   HSAIKRIADKLRSLGFTEHNPKLPETLNSELERETKQVGEIFIPLPNQLPKYRVGHTLDP 116

Query: 1810 SWSTPENPVPRPGSGNAISRFXXXXXXXXXXXXXXXXXXXKLREEKVPTLAELTIPQHEL 1631
            SWSTPENPVP PG+G AI+R+                     RE KVPTLA L++P  EL
Sbjct: 117  SWSTPENPVPIPGAGKAIARYHELRKEVKKEREAKK------REPKVPTLAVLSLPAEEL 170

Query: 1630 RRIRKVGIELKKKLKVGVAGITEGIVNGIHERWRRSEVVKIKCEDLSKLNMKRTHDLLER 1451
            RR+R +GI  K+KLKVG AGITEGIVNGIHERWRR+EVVKI CEDL ++NMKRTHD+LER
Sbjct: 171  RRLRTIGIAEKRKLKVGKAGITEGIVNGIHERWRRAEVVKIVCEDLCRMNMKRTHDMLER 230

Query: 1450 KTGGLVVWRSGSIIILYRGANYVYPYFLXXXXXXXN----------LVCTD--------- 1328
            KTGGLVVWRSGS I+LYRG NY YPYF                   + C D         
Sbjct: 231  KTGGLVVWRSGSKIVLYRGVNYKYPYFSPNNITANETSSDAVHDNHVDCEDDKMGSCSSR 290

Query: 1327 --SVKSGLPIVSNREAGKALVKGVGSPNKVRFLLPGEAQILEEADRMLDGLGPRFIDWWG 1154
              S++S     +N+     LV+GVGSP++VRF LPGEAQ+ EE D +LDGLGPRF DWWG
Sbjct: 291  ANSLRSSGSSETNKMVRPTLVQGVGSPDRVRFELPGEAQLAEEIDSLLDGLGPRFTDWWG 350

Query: 1153 VEPLPIDADLLPAIVPGYRRPFRLLPYGIKPKLTDDEMTILRRLGRPLPCHFALGRNKNL 974
             EPLP+DADLLPAIVPGYR+PFRLLPYG+ PKLTDDEMT LRRLGRPLPCHFALGRN+ L
Sbjct: 351  YEPLPVDADLLPAIVPGYRKPFRLLPYGVMPKLTDDEMTALRRLGRPLPCHFALGRNRKL 410

Query: 973  QGLAASIVKLWEKCEIAKIAVKRGVQNTNSLMMAEELKRLTGGTLLSRDKEFIALYRGKD 794
            QGLAASIVKLWEKCEIAKIAVKRGVQNTNS MMAEELK LTGGTLLSRD+EFI LYRGKD
Sbjct: 411  QGLAASIVKLWEKCEIAKIAVKRGVQNTNSEMMAEELKWLTGGTLLSRDREFIVLYRGKD 470

Query: 793  FLPPAVSTAIEDRRKPRIHRDKHTTH----GHSSTEIS----PSLASKAENSTSAGEFHE 638
            FLP AVS+ I++RRK  IH DK   H    G +  E       +++S + +  ++     
Sbjct: 471  FLPSAVSSVIKERRKYLIHGDKQRRHQSIAGETLKEAEDIKIETISSGSNDEFNSDNEQS 530

Query: 637  KSVRKERKPKSTNAVMENTSSKLFTVXXXXXXXXXXXXXXXXXXXAREPEVDREGVTEEE 458
              + K++K +S  A ++ TS +L                       ++P +D+EG+TEEE
Sbjct: 531  SDLLKDKKLRSLEAAIKRTSIRLSMALENKAKAEKLLAELENLEMPQQPAIDKEGITEEE 590

Query: 457  RYMLKKVGLRMKPFLLLGRRGVFDGTIENMHLHWKYRELVKIMASARGREDVYGVAKTLE 278
            RYML+K+GL+MKPFLLLGRRGVFDGTIENMHLHWKYRELVKI+   R  E  Y VA+TLE
Sbjct: 591  RYMLRKIGLKMKPFLLLGRRGVFDGTIENMHLHWKYRELVKIICKERSLEAAYEVARTLE 650

Query: 277  AESGGILVAVERVDRGYAIIVYRGKNYQRPADLRPQTLLNKKQAMKRSLEAQRCESLKLH 98
             ESGGILVAVERV +GYAI+VYRGKNY+RPA LRP TLL+K++A+KRSLEAQR ESLKLH
Sbjct: 651  VESGGILVAVERVSKGYAIVVYRGKNYRRPARLRPPTLLSKREALKRSLEAQRRESLKLH 710

Query: 97   VLKLAQNIDD 68
            VLKL +N++D
Sbjct: 711  VLKLTRNVND 720


>ref|XP_012082320.1| PREDICTED: chloroplastic group IIA intron splicing facilitator CRS1,
            chloroplastic isoform X2 [Jatropha curcas]
          Length = 1139

 Score =  782 bits (2019), Expect = 0.0
 Identities = 423/730 (57%), Positives = 508/730 (69%), Gaps = 35/730 (4%)
 Frame = -1

Query: 2152 MLLHQYHLSSPFPINTLNS-SQNLFLFSKSN--KTSPNFSKPFVTNSSNTSITTKAETVS 1982
            MLL    L    P  TL+  S +LF  SK+   +   N  KPF+      S T  ++T+ 
Sbjct: 1    MLLSLPRLYPSPPSKTLHKPSSSLFSISKTLILQNPRNPLKPFI----RCSATPDSKTLP 56

Query: 1981 KTAIERIAEKLRNLGYIEENKENPE---HKINNHTGTAGEIFLPFTQNLPKQRVGYTIDT 1811
             +AI+RIA+KLR+LG+ E N + PE    ++   T   GEIF+P    LPK RVG+T+D 
Sbjct: 57   HSAIKRIADKLRSLGFTEHNPKLPETLNSELERETKQVGEIFIPLPNQLPKYRVGHTLDP 116

Query: 1810 SWSTPENPVPRPGSGNAISRFXXXXXXXXXXXXXXXXXXXKLREEKVPTLAELTIPQHEL 1631
            SWSTPENPVP PG+G AI+R+                     RE KVPTLA L++P  EL
Sbjct: 117  SWSTPENPVPIPGAGKAIARYHELRKEVKKEREAKK------REPKVPTLAVLSLPAEEL 170

Query: 1630 RRIRKVGIELKKKLKVGVAGITEGIVNGIHERWRRSEVVKIKCEDLSKLNMKRTHDLLER 1451
            RR+R +GI  K+KLKVG AGITEGIVNGIHERWRR+EVVKI CEDL ++NMKRTHD+LER
Sbjct: 171  RRLRTIGIAEKRKLKVGKAGITEGIVNGIHERWRRAEVVKIVCEDLCRMNMKRTHDMLER 230

Query: 1450 KTGGLVVWRSGSIIILYRGANYVYPYFLXXXXXXXN----------LVCTD--------- 1328
            KTGGLVVWRSGS I+LYRG NY YPYF                   + C D         
Sbjct: 231  KTGGLVVWRSGSKIVLYRGVNYKYPYFSPNNITANETSSDAVHDNHVDCEDDKMGSCSSR 290

Query: 1327 --SVKSGLPIVSNREAGKALVKGVGSPNKVRFLLPGEAQILEEADRMLDGLGPRFIDWWG 1154
              S++S     +N+     LV+GVGSP++VRF LPGEAQ+ EE D +LDGLGPRF DWWG
Sbjct: 291  ANSLRSSGSSETNKMVRPTLVQGVGSPDRVRFELPGEAQLAEEIDSLLDGLGPRFTDWWG 350

Query: 1153 VEPLPIDADLLPAIVPGYRRPFRLLPYGIKPKLTDDEMTILRRLGRPLPCHFALGRNKNL 974
             EPLP+DADLLPAIVPGYR+PFRLLPYG+ PKLTDDEMT LRRLGRPLPCHFALGRN+ L
Sbjct: 351  YEPLPVDADLLPAIVPGYRKPFRLLPYGVMPKLTDDEMTALRRLGRPLPCHFALGRNRKL 410

Query: 973  QGLAASIVKLWEKCEIAKIAVKRGVQNTNSLMMAEELKRLTGGTLLSRDKEFIALYRGKD 794
            QGLAASIVKLWEKCEIAKIAVKRGVQNTNS MMAEELK LTGGTLLSRD+EFI LYRGKD
Sbjct: 411  QGLAASIVKLWEKCEIAKIAVKRGVQNTNSEMMAEELKWLTGGTLLSRDREFIVLYRGKD 470

Query: 793  FLPPAVSTAIEDRRKPRIHRDKHTTH----GHSSTEIS----PSLASKAENSTSAGEFHE 638
            FLP AVS+ I++RRK  IH DK   H    G +  E       +++S + +  ++     
Sbjct: 471  FLPSAVSSVIKERRKYLIHGDKQRRHQSIAGETLKEAEDIKIETISSGSNDEFNSDNEQS 530

Query: 637  KSVRKERKPKSTNAVMENTSSKLFTVXXXXXXXXXXXXXXXXXXXAREPEVDREGVTEEE 458
              + K++K +S  A ++ TS +L                       ++P +D+EG+TEEE
Sbjct: 531  SDLLKDKKLRSLEAAIKRTSIRLSMALENKAKAEKLLAELENLEMPQQPAIDKEGITEEE 590

Query: 457  RYMLKKVGLRMKPFLLLGRRGVFDGTIENMHLHWKYRELVKIMASARGREDVYGVAKTLE 278
            RYML+K+GL+MKPFLLLGRRGVFDGTIENMHLHWKYRELVKI+   R  E  Y VA+TLE
Sbjct: 591  RYMLRKIGLKMKPFLLLGRRGVFDGTIENMHLHWKYRELVKIICKERSLEAAYEVARTLE 650

Query: 277  AESGGILVAVERVDRGYAIIVYRGKNYQRPADLRPQTLLNKKQAMKRSLEAQRCESLKLH 98
             ESGGILVAVERV +GYAI+VYRGKNY+RPA LRP TLL+K++A+KRSLEAQR ESLKLH
Sbjct: 651  VESGGILVAVERVSKGYAIVVYRGKNYRRPARLRPPTLLSKREALKRSLEAQRRESLKLH 710

Query: 97   VLKLAQNIDD 68
            VLKL +N++D
Sbjct: 711  VLKLTRNVND 720


>ref|XP_012082313.1| PREDICTED: chloroplastic group IIA intron splicing facilitator CRS1,
            chloroplastic isoform X1 [Jatropha curcas]
            gi|643739679|gb|KDP45417.1| hypothetical protein
            JCGZ_09666 [Jatropha curcas]
          Length = 1142

 Score =  782 bits (2019), Expect = 0.0
 Identities = 423/730 (57%), Positives = 508/730 (69%), Gaps = 35/730 (4%)
 Frame = -1

Query: 2152 MLLHQYHLSSPFPINTLNS-SQNLFLFSKSN--KTSPNFSKPFVTNSSNTSITTKAETVS 1982
            MLL    L    P  TL+  S +LF  SK+   +   N  KPF+      S T  ++T+ 
Sbjct: 1    MLLSLPRLYPSPPSKTLHKPSSSLFSISKTLILQNPRNPLKPFI----RCSATPDSKTLP 56

Query: 1981 KTAIERIAEKLRNLGYIEENKENPE---HKINNHTGTAGEIFLPFTQNLPKQRVGYTIDT 1811
             +AI+RIA+KLR+LG+ E N + PE    ++   T   GEIF+P    LPK RVG+T+D 
Sbjct: 57   HSAIKRIADKLRSLGFTEHNPKLPETLNSELERETKQVGEIFIPLPNQLPKYRVGHTLDP 116

Query: 1810 SWSTPENPVPRPGSGNAISRFXXXXXXXXXXXXXXXXXXXKLREEKVPTLAELTIPQHEL 1631
            SWSTPENPVP PG+G AI+R+                     RE KVPTLA L++P  EL
Sbjct: 117  SWSTPENPVPIPGAGKAIARYHELRKEVKKEREAKK------REPKVPTLAVLSLPAEEL 170

Query: 1630 RRIRKVGIELKKKLKVGVAGITEGIVNGIHERWRRSEVVKIKCEDLSKLNMKRTHDLLER 1451
            RR+R +GI  K+KLKVG AGITEGIVNGIHERWRR+EVVKI CEDL ++NMKRTHD+LER
Sbjct: 171  RRLRTIGIAEKRKLKVGKAGITEGIVNGIHERWRRAEVVKIVCEDLCRMNMKRTHDMLER 230

Query: 1450 KTGGLVVWRSGSIIILYRGANYVYPYFLXXXXXXXN----------LVCTD--------- 1328
            KTGGLVVWRSGS I+LYRG NY YPYF                   + C D         
Sbjct: 231  KTGGLVVWRSGSKIVLYRGVNYKYPYFSPNNITANETSSDAVHDNHVDCEDDKMGSCSSR 290

Query: 1327 --SVKSGLPIVSNREAGKALVKGVGSPNKVRFLLPGEAQILEEADRMLDGLGPRFIDWWG 1154
              S++S     +N+     LV+GVGSP++VRF LPGEAQ+ EE D +LDGLGPRF DWWG
Sbjct: 291  ANSLRSSGSSETNKMVRPTLVQGVGSPDRVRFELPGEAQLAEEIDSLLDGLGPRFTDWWG 350

Query: 1153 VEPLPIDADLLPAIVPGYRRPFRLLPYGIKPKLTDDEMTILRRLGRPLPCHFALGRNKNL 974
             EPLP+DADLLPAIVPGYR+PFRLLPYG+ PKLTDDEMT LRRLGRPLPCHFALGRN+ L
Sbjct: 351  YEPLPVDADLLPAIVPGYRKPFRLLPYGVMPKLTDDEMTALRRLGRPLPCHFALGRNRKL 410

Query: 973  QGLAASIVKLWEKCEIAKIAVKRGVQNTNSLMMAEELKRLTGGTLLSRDKEFIALYRGKD 794
            QGLAASIVKLWEKCEIAKIAVKRGVQNTNS MMAEELK LTGGTLLSRD+EFI LYRGKD
Sbjct: 411  QGLAASIVKLWEKCEIAKIAVKRGVQNTNSEMMAEELKWLTGGTLLSRDREFIVLYRGKD 470

Query: 793  FLPPAVSTAIEDRRKPRIHRDKHTTH----GHSSTEIS----PSLASKAENSTSAGEFHE 638
            FLP AVS+ I++RRK  IH DK   H    G +  E       +++S + +  ++     
Sbjct: 471  FLPSAVSSVIKERRKYLIHGDKQRRHQSIAGETLKEAEDIKIETISSGSNDEFNSDNEQS 530

Query: 637  KSVRKERKPKSTNAVMENTSSKLFTVXXXXXXXXXXXXXXXXXXXAREPEVDREGVTEEE 458
              + K++K +S  A ++ TS +L                       ++P +D+EG+TEEE
Sbjct: 531  SDLLKDKKLRSLEAAIKRTSIRLSMALENKAKAEKLLAELENLEMPQQPAIDKEGITEEE 590

Query: 457  RYMLKKVGLRMKPFLLLGRRGVFDGTIENMHLHWKYRELVKIMASARGREDVYGVAKTLE 278
            RYML+K+GL+MKPFLLLGRRGVFDGTIENMHLHWKYRELVKI+   R  E  Y VA+TLE
Sbjct: 591  RYMLRKIGLKMKPFLLLGRRGVFDGTIENMHLHWKYRELVKIICKERSLEAAYEVARTLE 650

Query: 277  AESGGILVAVERVDRGYAIIVYRGKNYQRPADLRPQTLLNKKQAMKRSLEAQRCESLKLH 98
             ESGGILVAVERV +GYAI+VYRGKNY+RPA LRP TLL+K++A+KRSLEAQR ESLKLH
Sbjct: 651  VESGGILVAVERVSKGYAIVVYRGKNYRRPARLRPPTLLSKREALKRSLEAQRRESLKLH 710

Query: 97   VLKLAQNIDD 68
            VLKL +N++D
Sbjct: 711  VLKLTRNVND 720


>ref|XP_011098529.1| PREDICTED: chloroplastic group IIA intron splicing facilitator CRS1,
            chloroplastic [Sesamum indicum]
          Length = 1054

 Score =  779 bits (2011), Expect = 0.0
 Identities = 416/692 (60%), Positives = 501/692 (72%), Gaps = 30/692 (4%)
 Frame = -1

Query: 2053 PNFS-KPFVTNSSNTSITTKAE--TVSKTAIERIAEKLRNLGYIEENK-ENPEHKINNHT 1886
            PNF  KPF   +S +   + A+  T+  +AI RIAEKLR+LGY+EE+  +N +  +    
Sbjct: 33   PNFLFKPFRRRASISVAASGADSQTLPASAIHRIAEKLRSLGYVEESSNDNDDETLPPGP 92

Query: 1885 GTAGEIFLPFTQNLPKQRVGYTIDTSWSTPENPVPRPGSGNAISRFXXXXXXXXXXXXXX 1706
             + GEIF+PF   LPK RVG+T+D SWSTPENP+P PGSGNAI RF              
Sbjct: 93   NSPGEIFIPFPTRLPKFRVGHTLDPSWSTPENPIPDPGSGNAIRRFHELRRGVLEEEEKE 152

Query: 1705 XXXXXKL-REEKVPTLAELTIPQHELRRIRKVGIELKKKLKVGVAGITEGIVNGIHERWR 1529
                 +  ++E  P+LAELT+P+ ELRR+R +GI LKK+LK G AGITEGIVNGIHERWR
Sbjct: 153  RIRKRREGKKESAPSLAELTLPKDELRRLRSIGIGLKKELKAGKAGITEGIVNGIHERWR 212

Query: 1528 RSEVVKIKCEDLSKLNMKRTHDLLERKTGGLVVWRSGSIIILYRGANYVYPYFLXXXXXX 1349
            RSE+VKI CED+ +LNMKRTH+LLERKTGGLV+WRSGS IILYRG++Y YPYFL      
Sbjct: 213  RSELVKITCEDICRLNMKRTHELLERKTGGLVIWRSGSNIILYRGSDYKYPYFLTDELSN 272

Query: 1348 XNLV---------------------CTDSVKSGLPIVSNREAGKALVKGVGSPNKVRFLL 1232
             +                        TD+V+S         +   L++GVG PN+VRF L
Sbjct: 273  DSSSEESPNIDKDQGIVGKTDEQSPVTDAVESRRLNSGTHISHLPLIQGVGLPNRVRFQL 332

Query: 1231 PGEAQILEEADRMLDGLGPRFIDWWGVEPLPIDADLLPAIVPGYRRPFRLLPYGIKPKLT 1052
            PGEA++ +E D +L+GLGPRF DWWG +PLP+DADLLPA+VPGY+RPFRLLPYG+KPKLT
Sbjct: 333  PGEAELADEVDTLLEGLGPRFSDWWGCDPLPVDADLLPAVVPGYKRPFRLLPYGVKPKLT 392

Query: 1051 DDEMTILRRLGRPLPCHFALGRNKNLQGLAASIVKLWEKCEIAKIAVKRGVQNTNSLMMA 872
            +DEMT LRRLGRPLPCHFALGRN+ LQGLAA+IVKLWEKCEIAKIA+KRGVQNTNS +MA
Sbjct: 393  NDEMTTLRRLGRPLPCHFALGRNRKLQGLAAAIVKLWEKCEIAKIAIKRGVQNTNSELMA 452

Query: 871  EELKRLTGGTLLSRDKEFIALYRGKDFLPPAVSTAIEDRRKPRIHRDKHTTHGHS----S 704
            EELK LTGGTLLSRD EFIA YRGKDFLP AVS+AIE+RRK  I   K T  G+S    +
Sbjct: 453  EELKWLTGGTLLSRDNEFIAFYRGKDFLPAAVSSAIEERRKYGIDMSK-TRTGNSPILDA 511

Query: 703  TEISPSLASKAENSTSAGEFHEKSVRKERKPKSTNAVMENTSSKLFTVXXXXXXXXXXXX 524
             EI       A  +    E ++KS  +ERK K + A ME TS+KL               
Sbjct: 512  KEIKHGTKEYAAEAEHDEECNQKS--EERKLKFSQAAMERTSTKLSMALAKKARAEKLLA 569

Query: 523  XXXXXXXAREPEVDREGVTEEERYMLKKVGLRMKPFLLLGRRGVFDGTIENMHLHWKYRE 344
                    + PE+D+EG+TEEERYML+KVGLRMKPFLLLGRRGVFDGTIENMHLHWKYRE
Sbjct: 570  ELEKEEMPQPPEIDKEGITEEERYMLRKVGLRMKPFLLLGRRGVFDGTIENMHLHWKYRE 629

Query: 343  LVKIMASARGREDVYGVAKTLEAESGGILVAVERVDRGYAIIVYRGKNYQRPADLRPQTL 164
            LVK+    R  ++++ +A+TLEAESGGILVAVERV +GYAIIVYRGKNY RPA LRPQTL
Sbjct: 630  LVKVCIGRRNIKEIHEIARTLEAESGGILVAVERVSKGYAIIVYRGKNYTRPASLRPQTL 689

Query: 163  LNKKQAMKRSLEAQRCESLKLHVLKLAQNIDD 68
            L+K++AM+RSLEAQR ESLKLHVLKL++NID+
Sbjct: 690  LSKREAMRRSLEAQRRESLKLHVLKLSRNIDE 721


>ref|XP_002517407.1| conserved hypothetical protein [Ricinus communis]
            gi|223543418|gb|EEF44949.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 1009

 Score =  778 bits (2010), Expect = 0.0
 Identities = 410/683 (60%), Positives = 487/683 (71%), Gaps = 29/683 (4%)
 Frame = -1

Query: 2029 TNSSNTSITTKAETVSKTAIERIAEKLRNLGYIEENKENPEHKINNHTGTAGEIFLPFTQ 1850
            + SS T   + ++TV  +AI+RIA+KLR+LG+ E N E             GEIF+P   
Sbjct: 37   SKSSITIHCSNSKTVPSSAIQRIADKLRSLGFAEHNPEPHTRNSAETKQREGEIFIPLPN 96

Query: 1849 NLPKQRVGYTIDTSWSTPENPVPRPGSGNAISRFXXXXXXXXXXXXXXXXXXXKLREEKV 1670
             L K RVG+T+D SWSTPENPVPRPGSGNAI R+                     RE KV
Sbjct: 97   ELSKYRVGHTLDPSWSTPENPVPRPGSGNAILRYHELRKQVKKEREDKK------REAKV 150

Query: 1669 PTLAELTIPQHELRRIRKVGIELKKKLKVGVAGITEGIVNGIHERWRRSEVVKIKCEDLS 1490
            PTLAEL++ + ELRR+R++GI  K+KLKVG AGITEGIVNGIHERWRRSEVVKI CEDL 
Sbjct: 151  PTLAELSLSEEELRRLRRIGIAEKRKLKVGKAGITEGIVNGIHERWRRSEVVKIVCEDLC 210

Query: 1489 KLNMKRTHDLLERKTGGLVVWRSGSIIILYRGANYVYPYFLXXXXXXXNL---------- 1340
            ++NMKRTHDLLERKTGGLVVWR+GS I+LYRG NY+YPYFL       +           
Sbjct: 211  RMNMKRTHDLLERKTGGLVVWRAGSKIVLYRGVNYIYPYFLSDNTTENDTSIDAVQDTHK 270

Query: 1339 -----------VCTDSVKSGLPIVSNREAGKALVKGVGSPNKVRFLLPGEAQILEEADRM 1193
                          D VK   P  +N+    AL++GVG PN+VRF LPGEAQ+ EE D +
Sbjct: 271  HNDSDKIKSCSSSVDGVKFSGPSPTNKAVRPALIQGVGLPNRVRFQLPGEAQLAEEVDSL 330

Query: 1192 LDGLGPRFIDWWGVEPLPIDADLLPAIVPGYRRPFRLLPYGIKPKLTDDEMTILRRLGRP 1013
            L+GLGPRF DWWG EPLP+DADLLPAIVPGY++PFRLLPYGIKP LT+DEMT L+RLGRP
Sbjct: 331  LEGLGPRFSDWWGYEPLPVDADLLPAIVPGYQKPFRLLPYGIKPILTNDEMTTLKRLGRP 390

Query: 1012 LPCHFALGRNKNLQGLAASIVKLWEKCEIAKIAVKRGVQNTNSLMMAEELKRLTGGTLLS 833
            LPCHF LGRN+ LQGLAASI+KLWEKCEIAKIAVKRGVQNTNS MMAEELKRLTGGTLLS
Sbjct: 391  LPCHFVLGRNRKLQGLAASIIKLWEKCEIAKIAVKRGVQNTNSEMMAEELKRLTGGTLLS 450

Query: 832  RDKEFIALYRGKDFLPPAVSTAIEDRRKPRIHRDKHTTHGHSSTEI---SPSLASKAENS 662
            RD+EFI LYRGKDFLP AVS+AI++RR    +  K  T   +S E    +  +     NS
Sbjct: 451  RDREFIVLYRGKDFLPSAVSSAIKERRNHVFNVAKERTDNSTSAETAKEAEDVEDGTSNS 510

Query: 661  TSAGEFHEKS-----VRKERKPKSTNAVMENTSSKLFTVXXXXXXXXXXXXXXXXXXXAR 497
             S  EFH  +     + K+RK   T   ++ TS +L                      ++
Sbjct: 511  GSQDEFHGNNEQSYDLSKQRKLSFTKEAIKRTSIRLSMALEKKAKAVKLLAEIENSEMSQ 570

Query: 496  EPEVDREGVTEEERYMLKKVGLRMKPFLLLGRRGVFDGTIENMHLHWKYRELVKIMASAR 317
            +PE+D+EG+T+EERYML+KVGL+MKPFLL+GRRGVFDGTIENMHLHWKYRELVKI+   R
Sbjct: 571  QPEIDKEGITDEERYMLRKVGLKMKPFLLIGRRGVFDGTIENMHLHWKYRELVKIICKER 630

Query: 316  GREDVYGVAKTLEAESGGILVAVERVDRGYAIIVYRGKNYQRPADLRPQTLLNKKQAMKR 137
                V+ VA++LEAESGGILVAVERV +GYAI+VYRGKNYQRPA LRP TLL+K++AMKR
Sbjct: 631  SLNAVHEVAQSLEAESGGILVAVERVSKGYAIVVYRGKNYQRPALLRPPTLLSKREAMKR 690

Query: 136  SLEAQRCESLKLHVLKLAQNIDD 68
            SLEAQR ESLKLHVL+L +NI+D
Sbjct: 691  SLEAQRRESLKLHVLRLTRNIND 713


>ref|XP_006338519.1| PREDICTED: chloroplastic group IIA intron splicing facilitator CRS1,
            chloroplastic-like isoform X2 [Solanum tuberosum]
          Length = 878

 Score =  778 bits (2009), Expect = 0.0
 Identities = 411/714 (57%), Positives = 516/714 (72%), Gaps = 32/714 (4%)
 Frame = -1

Query: 2116 PINT----LNSSQNLFLFSKSNKTSPNFS-KPFVTNSSNTSITTKAET--VSKTAIERIA 1958
            PIN     LN S +  LFS    T+P+FS KPF   ++     T  +T  + ++AI RIA
Sbjct: 10   PINPSKTLLNPSPSHSLFS----TTPSFSLKPFFPRNTLPVFATSPDTEALPESAIRRIA 65

Query: 1957 EKLRNLGYIEE--NKENPEHKINNH--TGTAGEIFLPFTQNLPKQRVGYTIDTSWSTPEN 1790
            +KLR+LG++EE  N+E  E+ ++++    + G+IF+P    LPK RVG+T+DTSWSTPEN
Sbjct: 66   DKLRSLGFVEEPKNQETQENALSSNPTANSPGQIFVPLPTQLPKYRVGHTLDTSWSTPEN 125

Query: 1789 PVPRPGSGNAISRFXXXXXXXXXXXXXXXXXXXKLREEKVPTLAELTIPQHELRRIRKVG 1610
            PVP+PG GN+I +F                   + ++E+ P+LAELT+P  ELRR+R VG
Sbjct: 126  PVPQPGLGNSIQKFHELRDEFLKEKEKERLKNKEYKKERAPSLAELTLPAEELRRLRTVG 185

Query: 1609 IELKKKLKVGVAGITEGIVNGIHERWRRSEVVKIKCEDLSKLNMKRTHDLLERKTGGLVV 1430
            I L+KKLK+G AGITEGIVNGIHERWRR E+VKI CED+ +LNMKRTH+LLE+KTGGLV+
Sbjct: 186  IALRKKLKIGKAGITEGIVNGIHERWRRMELVKITCEDICRLNMKRTHELLEKKTGGLVI 245

Query: 1429 WRSGSIIILYRGANYVYPYF------------------LXXXXXXXNLVCTDSVKSGLPI 1304
            WRSGS IILYRGA+Y YPYF                  +       N   TD VK   P 
Sbjct: 246  WRSGSNIILYRGADYKYPYFSEISFENNSAQDATPDLFMGTEEHMTNSSGTDVVK---PD 302

Query: 1303 VSNREAGKALVKGVGSPNKVRFLLPGEAQILEEADRMLDGLGPRFIDWWGVEPLPIDADL 1124
             S+R++   +++GVGSP++VRF LPGEA+  EEAD++L+GLGPRF DWWG EPLPIDADL
Sbjct: 303  ASDRKSPPRVIQGVGSPDRVRFELPGEAEHTEEADKLLEGLGPRFTDWWGCEPLPIDADL 362

Query: 1123 LPAIVPGYRRPFRLLPYGIKPKLTDDEMTILRRLGRPLPCHFALGRNKNLQGLAASIVKL 944
            LPAIVPGY+RPFRLLPYG+KPKLT+DEMT LRRLGRPLPCHF LGRN+ LQGLAA+IVKL
Sbjct: 363  LPAIVPGYKRPFRLLPYGVKPKLTNDEMTTLRRLGRPLPCHFVLGRNRKLQGLAAAIVKL 422

Query: 943  WEKCEIAKIAVKRGVQNTNSLMMAEELKRLTGGTLLSRDKEFIALYRGKDFLPPAVSTAI 764
            WEKCEIAK+AVKRGVQNTNS +MAEELK LTGGTLLSRD+EFI  YRGKDFLP AVS+AI
Sbjct: 423  WEKCEIAKVAVKRGVQNTNSELMAEELKWLTGGTLLSRDREFIVFYRGKDFLPSAVSSAI 482

Query: 763  EDRRKPRIHRDKHTTHGHS---STEISPSLASKAENSTSAGEFHEKSVRKERKPKSTNAV 593
            E+RRK     +K      S   + E   S      +   A   ++K V++++K  S  A 
Sbjct: 483  EERRKQVFEEEKRNGFNSSVANAKERKQSTTGSVSDDGHARRNNQKGVQEKKKLTSMEAA 542

Query: 592  MENTSSKLFTVXXXXXXXXXXXXXXXXXXXAREPEVDREGVTEEERYMLKKVGLRMKPFL 413
            ++ T+ KL T                     ++ ++D+EG+TEEER+ML+K+GLRMKPFL
Sbjct: 543  IKRTADKLTTALEKKAEAENLLLELEEDEVPQQSDMDKEGITEEERFMLRKIGLRMKPFL 602

Query: 412  LLGRRGVFDGTIENMHLHWKYRELVKIMASARGREDVYGVAKTLEAESGGILVAVERVDR 233
            LLGRRGVFDGT+ENMHLHWKYRELVK++   +  E+V+ +A+ LEAESGGILVAVE V++
Sbjct: 603  LLGRRGVFDGTVENMHLHWKYRELVKVITGRKTIEEVHQIARMLEAESGGILVAVELVNK 662

Query: 232  GYAIIVYRGKNYQRPADLRPQTLLNKKQAMKRSLEAQRCESLKLHVLKLAQNID 71
            G+AIIVYRGKNY+RPA LRPQTLL+K++AMKRS+EAQR +SLKLHVLKL QNI+
Sbjct: 663  GHAIIVYRGKNYERPASLRPQTLLSKREAMKRSIEAQRRQSLKLHVLKLTQNIE 716


>ref|XP_006338518.1| PREDICTED: chloroplastic group IIA intron splicing facilitator CRS1,
            chloroplastic-like isoform X1 [Solanum tuberosum]
          Length = 1049

 Score =  778 bits (2009), Expect = 0.0
 Identities = 411/714 (57%), Positives = 516/714 (72%), Gaps = 32/714 (4%)
 Frame = -1

Query: 2116 PINT----LNSSQNLFLFSKSNKTSPNFS-KPFVTNSSNTSITTKAET--VSKTAIERIA 1958
            PIN     LN S +  LFS    T+P+FS KPF   ++     T  +T  + ++AI RIA
Sbjct: 10   PINPSKTLLNPSPSHSLFS----TTPSFSLKPFFPRNTLPVFATSPDTEALPESAIRRIA 65

Query: 1957 EKLRNLGYIEE--NKENPEHKINNH--TGTAGEIFLPFTQNLPKQRVGYTIDTSWSTPEN 1790
            +KLR+LG++EE  N+E  E+ ++++    + G+IF+P    LPK RVG+T+DTSWSTPEN
Sbjct: 66   DKLRSLGFVEEPKNQETQENALSSNPTANSPGQIFVPLPTQLPKYRVGHTLDTSWSTPEN 125

Query: 1789 PVPRPGSGNAISRFXXXXXXXXXXXXXXXXXXXKLREEKVPTLAELTIPQHELRRIRKVG 1610
            PVP+PG GN+I +F                   + ++E+ P+LAELT+P  ELRR+R VG
Sbjct: 126  PVPQPGLGNSIQKFHELRDEFLKEKEKERLKNKEYKKERAPSLAELTLPAEELRRLRTVG 185

Query: 1609 IELKKKLKVGVAGITEGIVNGIHERWRRSEVVKIKCEDLSKLNMKRTHDLLERKTGGLVV 1430
            I L+KKLK+G AGITEGIVNGIHERWRR E+VKI CED+ +LNMKRTH+LLE+KTGGLV+
Sbjct: 186  IALRKKLKIGKAGITEGIVNGIHERWRRMELVKITCEDICRLNMKRTHELLEKKTGGLVI 245

Query: 1429 WRSGSIIILYRGANYVYPYF------------------LXXXXXXXNLVCTDSVKSGLPI 1304
            WRSGS IILYRGA+Y YPYF                  +       N   TD VK   P 
Sbjct: 246  WRSGSNIILYRGADYKYPYFSEISFENNSAQDATPDLFMGTEEHMTNSSGTDVVK---PD 302

Query: 1303 VSNREAGKALVKGVGSPNKVRFLLPGEAQILEEADRMLDGLGPRFIDWWGVEPLPIDADL 1124
             S+R++   +++GVGSP++VRF LPGEA+  EEAD++L+GLGPRF DWWG EPLPIDADL
Sbjct: 303  ASDRKSPPRVIQGVGSPDRVRFELPGEAEHTEEADKLLEGLGPRFTDWWGCEPLPIDADL 362

Query: 1123 LPAIVPGYRRPFRLLPYGIKPKLTDDEMTILRRLGRPLPCHFALGRNKNLQGLAASIVKL 944
            LPAIVPGY+RPFRLLPYG+KPKLT+DEMT LRRLGRPLPCHF LGRN+ LQGLAA+IVKL
Sbjct: 363  LPAIVPGYKRPFRLLPYGVKPKLTNDEMTTLRRLGRPLPCHFVLGRNRKLQGLAAAIVKL 422

Query: 943  WEKCEIAKIAVKRGVQNTNSLMMAEELKRLTGGTLLSRDKEFIALYRGKDFLPPAVSTAI 764
            WEKCEIAK+AVKRGVQNTNS +MAEELK LTGGTLLSRD+EFI  YRGKDFLP AVS+AI
Sbjct: 423  WEKCEIAKVAVKRGVQNTNSELMAEELKWLTGGTLLSRDREFIVFYRGKDFLPSAVSSAI 482

Query: 763  EDRRKPRIHRDKHTTHGHS---STEISPSLASKAENSTSAGEFHEKSVRKERKPKSTNAV 593
            E+RRK     +K      S   + E   S      +   A   ++K V++++K  S  A 
Sbjct: 483  EERRKQVFEEEKRNGFNSSVANAKERKQSTTGSVSDDGHARRNNQKGVQEKKKLTSMEAA 542

Query: 592  MENTSSKLFTVXXXXXXXXXXXXXXXXXXXAREPEVDREGVTEEERYMLKKVGLRMKPFL 413
            ++ T+ KL T                     ++ ++D+EG+TEEER+ML+K+GLRMKPFL
Sbjct: 543  IKRTADKLTTALEKKAEAENLLLELEEDEVPQQSDMDKEGITEEERFMLRKIGLRMKPFL 602

Query: 412  LLGRRGVFDGTIENMHLHWKYRELVKIMASARGREDVYGVAKTLEAESGGILVAVERVDR 233
            LLGRRGVFDGT+ENMHLHWKYRELVK++   +  E+V+ +A+ LEAESGGILVAVE V++
Sbjct: 603  LLGRRGVFDGTVENMHLHWKYRELVKVITGRKTIEEVHQIARMLEAESGGILVAVELVNK 662

Query: 232  GYAIIVYRGKNYQRPADLRPQTLLNKKQAMKRSLEAQRCESLKLHVLKLAQNID 71
            G+AIIVYRGKNY+RPA LRPQTLL+K++AMKRS+EAQR +SLKLHVLKL QNI+
Sbjct: 663  GHAIIVYRGKNYERPASLRPQTLLSKREAMKRSIEAQRRQSLKLHVLKLTQNIE 716


>ref|XP_010100925.1| Chloroplastic group IIA intron splicing facilitator CRS1 [Morus
            notabilis] gi|587959642|gb|EXC45069.1| Chloroplastic
            group IIA intron splicing facilitator CRS1 [Morus
            notabilis]
          Length = 966

 Score =  775 bits (2002), Expect = 0.0
 Identities = 422/713 (59%), Positives = 499/713 (69%), Gaps = 26/713 (3%)
 Frame = -1

Query: 2128 SSPFPINTL-NSSQNLFLFSKSNKTSPNFSKPFVTNSSNTSITTKAETVSKTAIERIAEK 1952
            +SP P   L + S  LF FS    T+P   K F   SSN    T    + K+AI+RI+EK
Sbjct: 10   TSPLPPKLLTHRSPPLFFFSSPFSTTPKPLK-FTVRSSNADAQT---LLPKSAIQRISEK 65

Query: 1951 LRNLGYIEENKENPEHKINNHTGTAGEIFLPFTQNLPKQRVGYTIDTSWSTPENPVPRPG 1772
            LR+LG+ +EN  +PE +      +AGEIF+P    LPKQRVG+TID SWS+PENPVP PG
Sbjct: 66   LRSLGFTDENP-SPEPE----RSSAGEIFVPLPHRLPKQRVGHTIDASWSSPENPVPEPG 120

Query: 1771 SGNAISRFXXXXXXXXXXXXXXXXXXXK-LREEK--VPTLAELTIPQHELRRIRKVGIEL 1601
            SG AI RF                      REE+  VPTLAEL +P  ELRR+R +GI L
Sbjct: 121  SGTAIKRFRELKTEVRRQRREERKESAANAREERERVPTLAELRLPPEELRRLRTLGIGL 180

Query: 1600 KKKLKVGVAGITEGIVNGIHERWRRSEVVKIKCEDLSKLNMKRTHDLLERKTGGLVVWRS 1421
            +KK+KVG AGITEGIVNGIHERWR+SEVVKI+CED+ ++NMKRTHDLLE+KTGGLVVWRS
Sbjct: 181  RKKVKVGKAGITEGIVNGIHERWRQSEVVKIECEDICRMNMKRTHDLLEKKTGGLVVWRS 240

Query: 1420 GSIIILYRGANYVYPYFLXXXXXXXNLV------------------CTDSVKSGLPIVSN 1295
            GS I+LYRG  Y YPYF                               D V++  P   N
Sbjct: 241  GSKIVLYRGIKYKYPYFFVGKDASHTATLPVPDVGDEEQNKTDTSSSIDGVETVAPTPGN 300

Query: 1294 REAGKALVKGVGSPNKVRFLLPGEAQILEEADRMLDGLGPRFIDWWGVEPLPIDADLLPA 1115
            +    +L++GVG PN+VRF LPGEAQ+ EEADR+LDGLGPRF DWWG +P P+DADLL  
Sbjct: 301  KLVQPSLIQGVGLPNRVRFQLPGEAQLAEEADRLLDGLGPRFTDWWGYDPQPVDADLLRP 360

Query: 1114 IVPGYRRPFRLLPYGIKPKLTDDEMTILRRLGRPLPCHFALGRNKNLQGLAASIVKLWEK 935
            IV GYRRPFRLLPYG+ PKLTDDEMT LRRL RPLPCHFALGRN+NLQGLA+S+VKLWEK
Sbjct: 361  IVHGYRRPFRLLPYGVLPKLTDDEMTTLRRLARPLPCHFALGRNRNLQGLASSVVKLWEK 420

Query: 934  CEIAKIAVKRGVQNTNSLMMAEELKRLTGGTLLSRDKEFIALYRGKDFLPPAVSTAIEDR 755
            CE+AKIA+KRGVQNTNS MMAEELK LTGGTLL+RD+EFI LYRGKDFLP AVS+AIE+R
Sbjct: 421  CEVAKIAIKRGVQNTNSEMMAEELKSLTGGTLLARDREFIVLYRGKDFLPSAVSSAIEER 480

Query: 754  RKPRIHRDK-HTTHGHSSTEISPSLASKAENSTSAGEF--HEKSVRKE-RKPKSTNAVME 587
            RK  I   K  T H  S       L S    ++   E   H+K +  E RKP      ++
Sbjct: 481  RKYVIQAKKLKTEHQTSVKTEQDQLGSVVCGASELREINGHKKRLPSEQRKPSVAETSVK 540

Query: 586  NTSSKLFTVXXXXXXXXXXXXXXXXXXXAREPEVDREGVTEEERYMLKKVGLRMKPFLLL 407
             TS KL                       ++PE+D+EG+T+EERYML+K+GLRMKPFLLL
Sbjct: 541  GTSIKLSMALEKKAKAEQLLAELEKAESRQQPEIDKEGITKEERYMLRKIGLRMKPFLLL 600

Query: 406  GRRGVFDGTIENMHLHWKYRELVKIMASARGREDVYGVAKTLEAESGGILVAVERVDRGY 227
            GRRGVFDGTIENMHLHWKYRELVK++++ +  E V+ VA+TLEAESGGILVAVER  +GY
Sbjct: 601  GRRGVFDGTIENMHLHWKYRELVKVISNEKSIEAVHQVAQTLEAESGGILVAVERESKGY 660

Query: 226  AIIVYRGKNYQRPADLRPQTLLNKKQAMKRSLEAQRCESLKLHVLKLAQNIDD 68
            AIIVYRGKNY+RPA LRPQTLL K+ AMKRS+EAQR +SLKLHVLKL +NIDD
Sbjct: 661  AIIVYRGKNYERPASLRPQTLLTKRAAMKRSIEAQRRQSLKLHVLKLTKNIDD 713


>ref|XP_004232267.1| PREDICTED: chloroplastic group IIA intron splicing facilitator CRS1,
            chloroplastic [Solanum lycopersicum]
          Length = 1049

 Score =  775 bits (2002), Expect = 0.0
 Identities = 407/713 (57%), Positives = 509/713 (71%), Gaps = 31/713 (4%)
 Frame = -1

Query: 2116 PINT----LNSSQNLFLFSKSNKTSPNFSKPFVTNSSNTSITTKAET--VSKTAIERIAE 1955
            PIN     L  S +  LFS +   SP   KPF    S        +T  + ++AI RIA+
Sbjct: 10   PINPSKTLLKPSPSHSLFSSTPSLSP---KPFFPRDSLPVFAASPDTEALPESAIRRIAD 66

Query: 1954 KLRNLGYIEE--NKENPEHKINNH--TGTAGEIFLPFTQNLPKQRVGYTIDTSWSTPENP 1787
            KLR+LG++E+  N+E  E+ ++++    + G+IF+P    LPK RVG+T+DTSWSTPENP
Sbjct: 67   KLRSLGFVEQPKNQETQENALSSNPTANSPGQIFVPLPTQLPKYRVGHTLDTSWSTPENP 126

Query: 1786 VPRPGSGNAISRFXXXXXXXXXXXXXXXXXXXKLREEKVPTLAELTIPQHELRRIRKVGI 1607
            VP+PG G +I +F                   + ++E+ P+LAELT+P  ELRR+R VGI
Sbjct: 127  VPQPGLGKSIQKFHELRDEFLKEKDKERLKNKEYKKERAPSLAELTLPAEELRRLRTVGI 186

Query: 1606 ELKKKLKVGVAGITEGIVNGIHERWRRSEVVKIKCEDLSKLNMKRTHDLLERKTGGLVVW 1427
             L+KKLK+G AGITEGIVNGIHERWRR E+VKI CED+ +LNMKRTH+LLE+KTGGLV+W
Sbjct: 187  ALRKKLKIGKAGITEGIVNGIHERWRRIELVKITCEDICRLNMKRTHELLEKKTGGLVIW 246

Query: 1426 RSGSIIILYRGANYVYPYF------------------LXXXXXXXNLVCTDSVKSGLPIV 1301
            RSGS IILYRGA+Y YPYF                  +       N    D+VKS     
Sbjct: 247  RSGSNIILYRGADYKYPYFSENSFENNSAQDANPDLFMGAEEHMTNSSGIDAVKSD---A 303

Query: 1300 SNREAGKALVKGVGSPNKVRFLLPGEAQILEEADRMLDGLGPRFIDWWGVEPLPIDADLL 1121
            S+R++   +++GVGSP++VRF LPGEA+  EEAD++L+GLGPRF DWWG EPLPIDADLL
Sbjct: 304  SDRKSPPRVIQGVGSPDRVRFELPGEAEHTEEADKLLEGLGPRFTDWWGCEPLPIDADLL 363

Query: 1120 PAIVPGYRRPFRLLPYGIKPKLTDDEMTILRRLGRPLPCHFALGRNKNLQGLAASIVKLW 941
            PAIVPGY+RPFRLLPYG+KPKLT+DEMT LRRLGRPLPCHF LGRN+ LQGLAA+IVKLW
Sbjct: 364  PAIVPGYKRPFRLLPYGVKPKLTNDEMTTLRRLGRPLPCHFVLGRNRKLQGLAAAIVKLW 423

Query: 940  EKCEIAKIAVKRGVQNTNSLMMAEELKRLTGGTLLSRDKEFIALYRGKDFLPPAVSTAIE 761
            EKCEIAK+AVKRGVQNTNS +M EELK LTGGTLLSRD+EFI  YRGKDFLP AVS+AIE
Sbjct: 424  EKCEIAKVAVKRGVQNTNSELMVEELKWLTGGTLLSRDREFIVFYRGKDFLPSAVSSAIE 483

Query: 760  DRRKPRIHRDKHTTHGHSSTEISPSLASKAENSTSAGEFH---EKSVRKERKPKSTNAVM 590
            +RRK     +K      S         S  E+ +  G  H   +K V++++K  S  A +
Sbjct: 484  ERRKQVFEEEKRNGFNSSVANAKERKQSTTESVSDDGHAHRNNQKGVQEKKKLTSMEAAI 543

Query: 589  ENTSSKLFTVXXXXXXXXXXXXXXXXXXXAREPEVDREGVTEEERYMLKKVGLRMKPFLL 410
            + T+ KL T                     ++ ++D+EG+TEEER+ML+K+GLRMKPFLL
Sbjct: 544  KRTADKLTTALEKKAEAEKLLLELEEDEVPQQSDMDKEGITEEERFMLRKIGLRMKPFLL 603

Query: 409  LGRRGVFDGTIENMHLHWKYRELVKIMASARGREDVYGVAKTLEAESGGILVAVERVDRG 230
            LGRRGVFDGT+ENMHLHWKYRELVK++   +  E+V+ +A+ LEAESGGILVAVERV++G
Sbjct: 604  LGRRGVFDGTVENMHLHWKYRELVKVITGRKNIEEVHQIARMLEAESGGILVAVERVNKG 663

Query: 229  YAIIVYRGKNYQRPADLRPQTLLNKKQAMKRSLEAQRCESLKLHVLKLAQNID 71
            YAIIVYRGKNY+RPA LRPQTLL+K++AMKRS+EAQR +SLKLHVLKL QNI+
Sbjct: 664  YAIIVYRGKNYERPASLRPQTLLSKREAMKRSIEAQRRQSLKLHVLKLTQNIE 716


>ref|XP_010687964.1| PREDICTED: chloroplastic group IIA intron splicing facilitator CRS1,
            chloroplastic [Beta vulgaris subsp. vulgaris]
            gi|731353253|ref|XP_010687965.1| PREDICTED: chloroplastic
            group IIA intron splicing facilitator CRS1, chloroplastic
            [Beta vulgaris subsp. vulgaris]
            gi|731353255|ref|XP_010687966.1| PREDICTED: chloroplastic
            group IIA intron splicing facilitator CRS1, chloroplastic
            [Beta vulgaris subsp. vulgaris]
            gi|731353257|ref|XP_010687967.1| PREDICTED: chloroplastic
            group IIA intron splicing facilitator CRS1, chloroplastic
            [Beta vulgaris subsp. vulgaris]
            gi|731353259|ref|XP_010687969.1| PREDICTED: chloroplastic
            group IIA intron splicing facilitator CRS1, chloroplastic
            [Beta vulgaris subsp. vulgaris]
            gi|731353261|ref|XP_010687970.1| PREDICTED: chloroplastic
            group IIA intron splicing facilitator CRS1, chloroplastic
            [Beta vulgaris subsp. vulgaris]
            gi|870850782|gb|KMT02848.1| hypothetical protein
            BVRB_8g194280 [Beta vulgaris subsp. vulgaris]
          Length = 1035

 Score =  773 bits (1996), Expect = 0.0
 Identities = 408/719 (56%), Positives = 513/719 (71%), Gaps = 27/719 (3%)
 Frame = -1

Query: 2143 HQYHLSS--PFPINTLNSSQNLFLFSKSNKTSP--NFSKPFVTNSSNTSITTKAETVSKT 1976
            H + LSS  PF  +      +       NK  P     +  ++    TS+  + +T+ K+
Sbjct: 8    HHFSLSSKTPFQHHHHYHKHHYISIHYPNKRPPIKTIKRTLISQFRPTSVDQE-KTLPKS 66

Query: 1975 AIERIAEKLRNLGYIEENKENPEHKINNHTGTAGEIFLPFTQNLPKQRVGYTIDTSWSTP 1796
            AI+RIAEKLR +G++EE+K N +   + +    GEI++P ++ +PK RVG+T+D+SWSTP
Sbjct: 67   AIQRIAEKLRAIGFVEESKNNTQLLESENDSKIGEIYVPNSRQIPKIRVGHTLDSSWSTP 126

Query: 1795 ENPVPRPGSGNAISRFXXXXXXXXXXXXXXXXXXXKLREEK--VPTLAELTIPQHELRRI 1622
            +NPVP PGSG+AI +                    + REEK  VP+LAEL +   ELRR+
Sbjct: 127  QNPVPEPGSGDAIVKLHGLSGVVRRERREFRKEEKREREEKGTVPSLAELKLSGSELRRL 186

Query: 1621 RKVGIELKKKLKVGVAGITEGIVNGIHERWRRSEVVKIKCEDLSKLNMKRTHDLLERKTG 1442
              +GI++K+K+K+G AGITEGIVNGIHERWR  EVVKI CED+ +LNMKRTHDLLE+KTG
Sbjct: 187  TTIGIKMKQKMKLGKAGITEGIVNGIHERWRSCEVVKIVCEDICRLNMKRTHDLLEKKTG 246

Query: 1441 GLVVWRSGSIIILYRGANYVYPYFLXXXXXXXNL----------------VCTDSVKSGL 1310
            G+VVWR+GS I+LYRG +Y YPYF         +                  + S++SG 
Sbjct: 247  GMVVWRTGSKIVLYRGVDYKYPYFSLDEAPSNIISENAMEVDDRMQAGEEKPSSSLESGG 306

Query: 1309 PIVSNREAGKALVKGVGSPNKVRFLLPGEAQILEEADRMLDGLGPRFIDWWGVEPLPIDA 1130
              ++   +  +LV GVGSPN+VRFLLPGE+Q++EEADR+LDGLGPRF DWWG EPLPIDA
Sbjct: 307  QSLTRILSQSSLVPGVGSPNRVRFLLPGESQLMEEADRLLDGLGPRFTDWWGCEPLPIDA 366

Query: 1129 DLLPAIVPGYRRPFRLLPYGIKPKLTDDEMTILRRLGRPLPCHFALGRNKNLQGLAASIV 950
            DLLPA++PGYRRPFRLLPYG+K +LT+DEMT L+RLGRPLPCHFALGRN+NLQGLAA+I+
Sbjct: 367  DLLPAVIPGYRRPFRLLPYGVKSQLTNDEMTTLKRLGRPLPCHFALGRNRNLQGLAAAIL 426

Query: 949  KLWEKCEIAKIAVKRGVQNTNSLMMAEELKRLTGGTLLSRDKEFIALYRGKDFLPPAVST 770
            KLWEKCEIAK+AVKRGVQNTNS +MA+ELKRLTGG LLSRDKE+I  YRGKDFLP AVST
Sbjct: 427  KLWEKCEIAKVAVKRGVQNTNSELMADELKRLTGGILLSRDKEYIVFYRGKDFLPSAVST 486

Query: 769  AIEDRRKPRIHRDKHTTHGHS--STE---ISPSLASKAENSTSAGEFHEKSVRKERKPKS 605
            AIE+RR+ R+HR+K   +  S  STE   +     + A  S +      ++V +ERK +S
Sbjct: 487  AIEERRRNRMHREKKLANDSSPKSTENIVLDTEECADASTSETGKVQKMRNVSQERKVRS 546

Query: 604  TNAVMENTSSKLFTVXXXXXXXXXXXXXXXXXXXAREPEVDREGVTEEERYMLKKVGLRM 425
                +  TS KL                      +++ EVD+EG+TEEERYML+KVGLRM
Sbjct: 547  IQTTIARTSRKLSMALEEKERTEKLLSDLEQAEISQQAEVDKEGITEEERYMLRKVGLRM 606

Query: 424  KPFLLLGRRGVFDGTIENMHLHWKYRELVKIMASARGREDVYGVAKTLEAESGGILVAVE 245
            KPFLLLGRRGVFDGTIENMHLHWKYRELVKIM   R   +++ +A+ LEAESGGILVAVE
Sbjct: 607  KPFLLLGRRGVFDGTIENMHLHWKYRELVKIMCGGRDISEIHDIARILEAESGGILVAVE 666

Query: 244  RVDRGYAIIVYRGKNYQRPADLRPQTLLNKKQAMKRSLEAQRCESLKLHVLKLAQNIDD 68
            +V R  AIIVYRGKNYQRPA LRP+TLLNKK+AMKRS+EAQR +SLKL+VLKLA+NID+
Sbjct: 667  KVKRANAIIVYRGKNYQRPASLRPETLLNKKEAMKRSIEAQRRKSLKLNVLKLARNIDE 725