BLASTX nr result

ID: Papaver30_contig00005823 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver30_contig00005823
         (1015 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_010256068.1| PREDICTED: pre-rRNA-processing protein TSR2 ...    62   7e-07
ref|XP_010256062.1| PREDICTED: pre-rRNA-processing protein TSR2 ...    59   6e-06

>ref|XP_010256068.1| PREDICTED: pre-rRNA-processing protein TSR2 isoform X2 [Nelumbo
           nucifera]
          Length = 161

 Score = 62.0 bits (149), Expect = 7e-07
 Identities = 47/149 (31%), Positives = 77/149 (51%), Gaps = 1/149 (0%)
 Frame = -2

Query: 801 QMPLESVSLFAKGISLILYR*LKLQVFVADTRVAYNKIAEYLRLNRGNINHPRVDKMVAD 622
           Q+  E++S  A+GISL+L R   LQV + +                G  +H + +++ A+
Sbjct: 12  QLSPEALSFLAEGISLVLSRWTALQVAIENEW-------------GGRDSHQKSEQLAAN 58

Query: 621 IVDFFIQQKEPRDVKSVRALLWELVCNCFKFGAGILQG-IYEVGEKLYNLYQEILQGKYD 445
           I  +F Q KEP  +  +  +L E +     F   I  G I EV EKL  ++++ LQG Y 
Sbjct: 59  IYSWFSQSKEPHYIDDLENMLDESMV--LSFNTEIEDGSIEEVAEKLMVMHEDCLQGNYG 116

Query: 444 SVEELGKTTSWIGEEFMEKLKSVEEKELI 358
           S+E+L K+ S  G+E + + + V  K L+
Sbjct: 117 SIEKLRKSNS--GKEAISQSRRVINKNLL 143


>ref|XP_010256062.1| PREDICTED: pre-rRNA-processing protein TSR2 isoform X1 [Nelumbo
           nucifera] gi|720000559|ref|XP_010256063.1| PREDICTED:
           pre-rRNA-processing protein TSR2 isoform X1 [Nelumbo
           nucifera] gi|720000562|ref|XP_010256065.1| PREDICTED:
           pre-rRNA-processing protein TSR2 isoform X1 [Nelumbo
           nucifera] gi|720000565|ref|XP_010256066.1| PREDICTED:
           pre-rRNA-processing protein TSR2 isoform X1 [Nelumbo
           nucifera] gi|720000568|ref|XP_010256067.1| PREDICTED:
           pre-rRNA-processing protein TSR2 isoform X1 [Nelumbo
           nucifera]
          Length = 200

 Score = 58.9 bits (141), Expect = 6e-06
 Identities = 45/143 (31%), Positives = 74/143 (51%), Gaps = 1/143 (0%)
 Frame = -2

Query: 801 QMPLESVSLFAKGISLILYR*LKLQVFVADTRVAYNKIAEYLRLNRGNINHPRVDKMVAD 622
           Q+  E++S  A+GISL+L R   LQV + +                G  +H + +++ A+
Sbjct: 12  QLSPEALSFLAEGISLVLSRWTALQVAIENEW-------------GGRDSHQKSEQLAAN 58

Query: 621 IVDFFIQQKEPRDVKSVRALLWELVCNCFKFGAGILQG-IYEVGEKLYNLYQEILQGKYD 445
           I  +F Q KEP  +  +  +L E +     F   I  G I EV EKL  ++++ LQG Y 
Sbjct: 59  IYSWFSQSKEPHYIDDLENMLDESMV--LSFNTEIEDGSIEEVAEKLMVMHEDCLQGNYG 116

Query: 444 SVEELGKTTSWIGEEFMEKLKSV 376
           S+E+L K+ S  G+E + + + V
Sbjct: 117 SIEKLRKSNS--GKEAISQSRRV 137


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