BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver30_contig00004934
         (6122 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AIG55302.1| gag-pol, partial [Camellia sinensis]                   499   0.0  
ref|XP_007032400.1| DNA/RNA polymerases superfamily protein [The...   471   0.0  
ref|XP_007200265.1| hypothetical protein PRUPE_ppa015000mg [Prun...   454   0.0  
ref|XP_007213082.1| hypothetical protein PRUPE_ppa021229mg [Prun...   446   0.0  
gb|AEV42258.1| hypothetical protein [Beta vulgaris]                   440   0.0  
emb|CAN66189.1| hypothetical protein VITISV_006047 [Vitis vinifera]   433   0.0  
gb|ABB47191.1| retrotransposon protein, putative, Ty3-gypsy subc...   405   0.0  
emb|CAN77191.1| hypothetical protein VITISV_006389 [Vitis vinifera]   470   0.0  
gb|AAN09852.1| putative polyprotein [Oryza sativa Japonica Group]     409   0.0  
gb|ABG65971.1| retrotransposon protein, putative, Ty3-gypsy subc...   409   0.0  
gb|ABA98266.1| retrotransposon protein, putative, Ty3-gypsy subc...   408   0.0  
gb|AAM93458.1| putative polyprotein [Oryza sativa Japonica Group...   407   0.0  
gb|AAS98511.1| putative polyprotein [Oryza sativa Japonica Group]     407   0.0  
gb|ABA97771.1| retrotransposon protein, putative, Ty3-gypsy subc...   409   0.0  
gb|AAL78097.1|AC093568_7 Putative polyprotein [Oryza sativa] gi|...   406   0.0  
gb|ABA96234.2| retrotransposon protein, putative, Ty3-gypsy subc...   406   0.0  
emb|CAE04776.3| OSJNBb0115I21.3 [Oryza sativa Japonica Group]         409   0.0  
gb|ABB46774.2| retrotransposon protein, putative, Ty3-gypsy subc...   408   0.0  
gb|AAM14695.1|AC097446_24 Putative polyprotein [Oryza sativa Jap...   408   0.0  
emb|CAD39969.2| OSJNBa0072D08.2 [Oryza sativa Japonica Group]         402   0.0  

>gb|AIG55302.1| gag-pol, partial [Camellia sinensis]
          Length = 923

 Score =  499 bits (1286), Expect(3) = 0.0
 Identities = 233/373 (62%), Positives = 304/373 (81%)
 Frame = -1

Query: 1736 CQQVKAEHQRPAGPLQPLPIAE*KWDSIAMDFVRGLPKGQQGRDSVWVIIDRLTKSAHFL 1557
            CQQVKAEHQRPAG LQPLPIAE KW+ I MDFV GLP+ Q+G D++WV++DRLTKSAHF+
Sbjct: 547  CQQVKAEHQRPAGLLQPLPIAEWKWEHITMDFVVGLPRTQRGSDAIWVVVDRLTKSAHFI 606

Query: 1556 PVRQADNITTLSNLYIREIVKLHGMPMSIVSDRDPLFTSKFWGRFQLSMGSTLSMSSVFH 1377
            P+R  D++  L++LYIR++V+LHG+P++IVSDRDP FT++ W   Q ++G+ L+ S+ +H
Sbjct: 607  PMRVRDSMDHLADLYIRDVVRLHGVPVTIVSDRDPCFTARLWQSLQSALGTKLTFSTAYH 666

Query: 1376 P*TYGQSERTIQVLEYMLRDCALEFKGNWSEQLPLVEFAYNNIY*SSIRMAPFEALYGRP 1197
            P T GQSERTIQ+LE MLR C L+F G W   LPLVEFAYNN + SSI MAPFEALYGRP
Sbjct: 667  PQTDGQSERTIQILEDMLRGCVLDFSGTWERHLPLVEFAYNNSFQSSIGMAPFEALYGRP 726

Query: 1196 FRTPLCWAEVSDRSVMGPAVVKETTEKIKVIQDRLRTAQSRQKSYAGQRRRPLEFAVGDQ 1017
             R+P+ WA+V D  ++GP +V+ETT+KI++I+ RL TAQSRQKSYA +R+R + F VGD 
Sbjct: 727  CRSPVFWADVGDAPLLGPELVRETTKKIELIRKRLVTAQSRQKSYADRRKRAMVFEVGDH 786

Query: 1016 VFLKVSPRPGIKRFGKKSKLAPRYIGPFEILQRIGEVAYRLALPTSLADVHNVFHVSMLR 837
            VFLK+SPR G+ RFGK  KL+PR+IGPFEIL+RIGEVAYRLAL   L+ VH+VF+VS+L+
Sbjct: 787  VFLKISPRRGLMRFGKSGKLSPRFIGPFEILERIGEVAYRLALLPKLSGVHDVFYVSILQ 846

Query: 836  KYHADPSHIIEWQDIQLNEYVTYEERPLRVVDSK*QVLRNKTIKLVKVIWQHHNSKEMTW 657
            KY  DPSH+++W D++++E  +YEERP+RV+D + QVLR KTI LVKV+W+HH  +E TW
Sbjct: 847  KYEPDPSHVLDWTDLEVDEDASYEERPVRVLDRRDQVLRGKTIPLVKVLWKHHGVEEATW 906

Query: 656  ELESEIRKKYQDL 618
            E E E+R+KY D+
Sbjct: 907  ERELEVREKYPDM 919



 Score =  334 bits (856), Expect(3) = 0.0
 Identities = 168/323 (52%), Positives = 225/323 (69%), Gaps = 5/323 (1%)
 Frame = -2

Query: 2689 FLGIGGYYRRFVENFSRLAVPLTHLTKKGVKFE*TDKCERAFEKLKHRLISAPILTTPEP 2510
            FLG+ GYYR+FV++FSRLA PLT LT+KGVKF  ++ CE++F++LK RL +AP+L  PE 
Sbjct: 226  FLGLAGYYRQFVKDFSRLASPLTRLTRKGVKFVWSETCEKSFQELKVRLTTAPVLIIPER 285

Query: 2509 RLGYEVYCDASGIGLGGVLMQKGKVIAYASR*LKTYEKNYTTYDLELAAVVFVLKLWRHY 2330
             LGY VYCDAS  GLG VLMQ+GKV+AY SR LK +EKNY T+DLEL AV+F LK+WRHY
Sbjct: 286  GLGYAVYCDASREGLGCVLMQEGKVVAYGSRQLKIHEKNYPTHDLELTAVIFALKIWRHY 345

Query: 2329 LYGENFFVFYDHKSLKYMFIQKDLNMRQIRWFELLKDYEFTLNYHPGKGNVVADALSRKE 2150
            LYGE F VF DHKS KY+F Q+DLN+RQ  W E ++DY+F L+ HPGK NVVADALSRK 
Sbjct: 346  LYGEKFEVFSDHKSFKYLFTQRDLNLRQRWWMEFIEDYDFELHCHPGKANVVADALSRKT 405

Query: 2149 YGSIASL-----RMIEDVRNLDLVVDFDDEKAFLYHLAVIPEIVKKVIKAQSTDISLQQV 1985
               +A +      M+  +   DL++    E A L+ +   P +V +V++AQ  D+ ++ +
Sbjct: 406  ISDVACIAIREWEMLGALGEFDLLLGESVEAAALFSVVAQPTLVTRVLEAQRGDLEIESL 465

Query: 1984 RGKLSMGEAPVNWSLETNGGIYFKGRLCVPDDEYL*KEILTMAHESVLTLHPGSTKMNYD 1805
            R K+S G+     ++     + ++ RL VP  E   +E+L   H S L +HPG TKM  D
Sbjct: 466  REKISSGKVEKGLTVYPEQSVRYRDRLFVP--ESCREEVLGEFHHSRLAVHPGGTKMYQD 523

Query: 1804 LRCQFWWRGMMKDIALFVSRCLS 1736
            L  QFWWRGM +D+A+FVS+CL+
Sbjct: 524  LGRQFWWRGMKRDVAVFVSKCLT 546



 Score =  321 bits (823), Expect(3) = 0.0
 Identities = 151/229 (65%), Positives = 183/229 (79%)
 Frame = -3

Query: 3363 MAPK*MKDLWKQLDELLELGFIRPRTSPWRARVLFVLKKDGTMRMCIDYRKLNQVTIKNK 3184
            MAP    +L  QL ELL+ GF+RP  SPW A  LFV KKDG +R+CIDYRKLN+ T+KNK
Sbjct: 1    MAPAEFVELKVQLQELLDKGFVRPSVSPWGAPALFVKKKDGALRLCIDYRKLNRATVKNK 60

Query: 3183 YPLPRIDDLFDQLKGAMCFTKIDLRMGYHQMRIREEDILKTTFGTCYGHYEFLVMPFGLK 3004
            YP+PRIDDLFDQLKG+ CF+KIDLR GY Q+R+REEDI KT F T YGHYEFLVMPFGL 
Sbjct: 61   YPMPRIDDLFDQLKGSRCFSKIDLRSGYQQLRVREEDIPKTAFRTRYGHYEFLVMPFGLT 120

Query: 3003 NAHAAFMDLMNRVFRPYINQFVVVFIDDVLIYSKSEEEHEKRLQIVLQTLREHKLYAKRS 2824
            NA A FMDLMNR+F  ++++FVVVF+DD+LIYS SEEEHE+ L++VL+ LR H+LYAK  
Sbjct: 121  NAPAVFMDLMNRIFWEFLDRFVVVFVDDILIYSPSEEEHEEHLRVVLELLRAHRLYAKFG 180

Query: 2823 KCEFWISEVLFLGHVISDQGIVVDPEKIAAVVEWKLQKNVFEV*SFLGL 2677
            KCEFW+ EV FLGHV+S +G+ VD  K+ AV +W   KNVFE+ +FLGL
Sbjct: 181  KCEFWLREVKFLGHVVSGEGVSVDTSKVEAVQDWAQPKNVFEIRNFLGL 229


>ref|XP_007032400.1| DNA/RNA polymerases superfamily protein [Theobroma cacao]
            gi|508711429|gb|EOY03326.1| DNA/RNA polymerases
            superfamily protein [Theobroma cacao]
          Length = 1447

 Score =  471 bits (1211), Expect(3) = 0.0
 Identities = 222/373 (59%), Positives = 289/373 (77%)
 Frame = -1

Query: 1736 CQQVKAEHQRPAGPLQPLPIAE*KWDSIAMDFVRGLPKGQQGRDSVWVIIDRLTKSAHFL 1557
            CQQVKAEHQ+PAG LQPLP+ E KW+ IAMDFV GLP+   G DS+W+++DRLTKSAHFL
Sbjct: 1072 CQQVKAEHQKPAGLLQPLPVPEWKWEHIAMDFVTGLPRTSGGYDSIWIVVDRLTKSAHFL 1131

Query: 1556 PVRQADNITTLSNLYIREIVKLHGMPMSIVSDRDPLFTSKFWGRFQLSMGSTLSMSSVFH 1377
            PV+        + +Y+ EIV+LHG+P+SIVSDR   FTS+FWG+ Q ++G+ L  S+ FH
Sbjct: 1132 PVKTTYGAAQYARVYVDEIVRLHGIPISIVSDRGAQFTSRFWGKLQEALGTKLDFSTAFH 1191

Query: 1376 P*TYGQSERTIQVLEYMLRDCALEFKGNWSEQLPLVEFAYNNIY*SSIRMAPFEALYGRP 1197
            P T GQSERTIQ LE MLR C ++    W + LPLVEFAYNN + +SI+MAPFEALYGR 
Sbjct: 1192 PQTDGQSERTIQTLEAMLRACVIDLGVRWEQYLPLVEFAYNNSFQTSIQMAPFEALYGRR 1251

Query: 1196 FRTPLCWAEVSDRSVMGPAVVKETTEKIKVIQDRLRTAQSRQKSYAGQRRRPLEFAVGDQ 1017
             R+P+ W EV +R ++GP +V++ TEKI +I+ R+ TAQSRQKSYA  RRR LEF VGD 
Sbjct: 1252 CRSPIGWLEVGERKLLGPELVQDATEKIHMIRQRMLTAQSRQKSYADNRRRDLEFQVGDH 1311

Query: 1016 VFLKVSPRPGIKRFGKKSKLAPRYIGPFEILQRIGEVAYRLALPTSLADVHNVFHVSMLR 837
            VFLKVSP  G+ RFGKK KL+PRYIGPFEIL+++G VAYRLALP  L+++H VFHVSMLR
Sbjct: 1312 VFLKVSPTKGVMRFGKKGKLSPRYIGPFEILEKVGAVAYRLALPPDLSNIHPVFHVSMLR 1371

Query: 836  KYHADPSHIIEWQDIQLNEYVTYEERPLRVVDSK*QVLRNKTIKLVKVIWQHHNSKEMTW 657
            KY+ DPSH+I ++ IQL + +TYEE+P+ ++D + + LR+K +  VKV+W++H S+E+TW
Sbjct: 1372 KYNPDPSHVIRYETIQLQDDLTYEEQPVAILDRQVKKLRSKDVASVKVLWRNHTSEEVTW 1431

Query: 656  ELESEIRKKYQDL 618
            E E E+R K+  L
Sbjct: 1432 EAEDEMRTKHPHL 1444



 Score =  378 bits (971), Expect(3) = 0.0
 Identities = 184/270 (68%), Positives = 219/270 (81%)
 Frame = -3

Query: 3486 IV*EFPDVFPEAFPGLLPKREINFVIDVQSGTAPISLSPYRMAPK*MKDLWKQLDELLEL 3307
            +V EF DVFPE  P L P+RE+ F ID+   T PIS+ PYRMAP  +K+L  QL++LL+ 
Sbjct: 513  VVKEFVDVFPEELPSLPPEREVEFCIDLIPDTRPISIPPYRMAPAELKELKDQLEDLLDK 572

Query: 3306 GFIRPRTSPWRARVLFVLKKDGTMRMCIDYRKLNQVTIKNKYPLPRIDDLFDQLKGAMCF 3127
            GFIRP  SPW A VLFV KKDG++R+CIDYR+LN+VT+KNKYPLPRIDDLFDQL+GA CF
Sbjct: 573  GFIRPSVSPWGAPVLFVKKKDGSLRLCIDYRQLNKVTVKNKYPLPRIDDLFDQLQGAQCF 632

Query: 3126 TKIDLRMGYHQMRIREEDILKTTFGTCYGHYEFLVMPFGLKNAHAAFMDLMNRVFRPYIN 2947
            +KIDLR GYHQ+RIR EDI KT F T YGHYEFLVM FGL NA AAFMDLMNRVF+PY++
Sbjct: 633  SKIDLRSGYHQLRIRNEDIPKTAFRTRYGHYEFLVMSFGLTNAPAAFMDLMNRVFKPYLD 692

Query: 2946 QFVVVFIDDVLIYSKSEEEHEKRLQIVLQTLREHKLYAKRSKCEFWISEVLFLGHVISDQ 2767
            +FVVVFIDD+LIYSKS EEHE+ L+IVLQ LREH+LYAK SKCEFW+  V FLGHV+S +
Sbjct: 693  KFVVVFIDDILIYSKSREEHEQHLKIVLQILREHRLYAKFSKCEFWLESVAFLGHVVSKE 752

Query: 2766 GIVVDPEKIAAVVEWKLQKNVFEV*SFLGL 2677
            GI VD +KI AV +W    +V E+ SF+GL
Sbjct: 753  GIRVDTKKIEAVEKWPRPTSVSEIRSFVGL 782



 Score =  307 bits (786), Expect(3) = 0.0
 Identities = 159/317 (50%), Positives = 215/317 (67%)
 Frame = -2

Query: 2689 FLGIGGYYRRFVENFSRLAVPLTHLTKKGVKFE*TDKCERAFEKLKHRLISAPILTTPEP 2510
            F+G+ GYYRRFV++FS++  PLT LT+K  KFE +D CE +FEKLK  L +AP+L+ P+ 
Sbjct: 779  FVGLAGYYRRFVKDFSKIVAPLTKLTRKDTKFEWSDACENSFEKLKACLTTAPVLSLPQG 838

Query: 2509 RLGYEVYCDASGIGLGGVLMQKGKVIAYASR*LKTYEKNYTTYDLELAAVVFVLKLWRHY 2330
              GY ++CDASG+GLG VLMQ GKVIAYASR LK +E+NY  +DLE+AA+VF LK+WRHY
Sbjct: 839  TGGYTMFCDASGVGLGCVLMQHGKVIAYASRQLKRHEQNYPIHDLEMAAIVFALKIWRHY 898

Query: 2329 LYGENFFVFYDHKSLKYMFIQKDLNMRQIRWFELLKDYEFTLNYHPGKGNVVADALSRKE 2150
            LYGE   ++ DHKSLKY+F Q+DLN+RQ RW ELLKDY+ T+ YHPGK NVVADALSRK 
Sbjct: 899  LYGETCEIYTDHKSLKYIFQQRDLNLRQCRWMELLKDYDCTILYHPGKANVVADALSRKS 958

Query: 2149 YGSIASLRMIEDVRNLDLVVDFDDEKAFLYHLAVIPEIVKKVIKAQSTDISLQQVRGKLS 1970
             GS+A + ++  +  +D + +   +  F             VIKA       Q  +GK+ 
Sbjct: 959  MGSLAHISIVRPIL-MDKIKEAQSKDEF-------------VIKALEDP---QGRKGKM- 1000

Query: 1969 MGEAPVNWSLETNGGIYFKGRLCVPDDEYL*KEILTMAHESVLTLHPGSTKMNYDLRCQF 1790
                   ++  T+G + +  RL VPD + L +EIL  AH +   +HPG+TKM  DL+  +
Sbjct: 1001 -------FTKGTDGVLRYGTRLYVPDGDGLRREILEEAHMAAYVVHPGATKMYQDLKEVY 1053

Query: 1789 WWRGMMKDIALFVSRCL 1739
            WW G+ +D+A FVS+CL
Sbjct: 1054 WWEGLKRDVAEFVSKCL 1070



 Score = 62.4 bits (150), Expect = 5e-06
 Identities = 37/126 (29%), Positives = 61/126 (48%), Gaps = 3/126 (2%)
 Frame = -3

Query: 4728 VRFATYMFHGDA*NWWESV--QRMEDMSRMSWKNFVKLFSEKYFPPTAKAAKCMEFMFL- 4558
            V  A +     A  W+ S+   R  + + ++W  F   F +++ P + + A+  EF  L 
Sbjct: 87   VELAAFQLEDVAQEWYSSLCRGRPTNATPLAWSEFSVAFLDRFLPLSVRNARAREFETLV 146

Query: 4557 QQGDMTVTQLDKKFAELERYETHLVPTQELKARKLESALKAPIRDKVVSHQHVTYKRFLR 4378
            Q   MTV++ D KF +L RY  +LV T+E+K ++    L  P+   V S    TY   + 
Sbjct: 147  QTSSMTVSEYDIKFTQLARYAPYLVSTEEMKIQRFVDGLVEPLFRAVASRDFTTYSTAVD 206

Query: 4377 TALAVE 4360
             A  +E
Sbjct: 207  RAQRIE 212


>ref|XP_007200265.1| hypothetical protein PRUPE_ppa015000mg [Prunus persica]
            gi|462395665|gb|EMJ01464.1| hypothetical protein
            PRUPE_ppa015000mg [Prunus persica]
          Length = 1493

 Score =  454 bits (1169), Expect(3) = 0.0
 Identities = 215/370 (58%), Positives = 285/370 (77%)
 Frame = -1

Query: 1736 CQQVKAEHQRPAGPLQPLPIAE*KWDSIAMDFVRGLPKGQQGRDSVWVIIDRLTKSAHFL 1557
            CQQVKAE Q+P+G +QPLPI E KW+ I MDFV  LP+  +G D +WVI+DRLTKS HFL
Sbjct: 1118 CQQVKAERQKPSGLMQPLPIPEWKWERITMDFVFKLPRTSKGHDGIWVIVDRLTKSTHFL 1177

Query: 1556 PVRQADNITTLSNLYIREIVKLHGMPMSIVSDRDPLFTSKFWGRFQLSMGSTLSMSSVFH 1377
            P+++  ++T L+ L++ EIV+LHG P+SIVSDRD  FTS+FW   Q +MG+ L  S+ FH
Sbjct: 1178 PIKETYSLTKLAKLFVDEIVRLHGAPVSIVSDRDARFTSRFWKCLQEAMGTRLQFSTAFH 1237

Query: 1376 P*TYGQSERTIQVLEYMLRDCALEFKGNWSEQLPLVEFAYNNIY*SSIRMAPFEALYGRP 1197
            P T GQSERTIQ LE MLR C L+ K +W   L LVEFAYNN Y +SI+MAP+EALYGR 
Sbjct: 1238 PQTDGQSERTIQTLEDMLRSCVLQMKDSWDTHLALVEFAYNNSYHASIKMAPYEALYGRQ 1297

Query: 1196 FRTPLCWAEVSDRSVMGPAVVKETTEKIKVIQDRLRTAQSRQKSYAGQRRRPLEFAVGDQ 1017
             RTP+CW EV D+ +     ++ TTEK+K+I+++L+ AQ RQKSYA  R + LEFAVGD 
Sbjct: 1298 CRTPICWNEVGDKKLEKVDSIQATTEKVKMIKEKLKIAQDRQKSYADNRSKDLEFAVGDW 1357

Query: 1016 VFLKVSPRPGIKRFGKKSKLAPRYIGPFEILQRIGEVAYRLALPTSLADVHNVFHVSMLR 837
            VFLK+SP  G+ RFGK+ KL+PRYIGP+EI +RIG VAYRLALP  L+ VH+VFHVSMLR
Sbjct: 1358 VFLKLSPWKGVMRFGKRGKLSPRYIGPYEITERIGPVAYRLALPAELSQVHDVFHVSMLR 1417

Query: 836  KYHADPSHIIEWQDIQLNEYVTYEERPLRVVDSK*QVLRNKTIKLVKVIWQHHNSKEMTW 657
            KY +DPSHI+E+Q +++ E ++YEE+P++++D K Q+LR++ I +VKV+W+    +E TW
Sbjct: 1418 KYMSDPSHILEYQPVEVEEDLSYEEQPVQILDRKEQMLRSRFIPVVKVLWRSQTVEEATW 1477

Query: 656  ELESEIRKKY 627
            E E+++R KY
Sbjct: 1478 EPEAQMRVKY 1487



 Score =  369 bits (948), Expect(3) = 0.0
 Identities = 179/274 (65%), Positives = 219/274 (79%)
 Frame = -3

Query: 3498 KDARIV*EFPDVFPEAFPGLLPKREINFVIDVQSGTAPISLSPYRMAPK*MKDLWKQLDE 3319
            +D  +V EFP++FP+  PGL PKREI F ID   GT PI  +PYRMAP  +++L  QL E
Sbjct: 526  EDIPVVCEFPNIFPDDLPGLPPKREIEFTIDFLPGTNPIYQTPYRMAPAELRELKIQLQE 585

Query: 3318 LLELGFIRPRTSPWRARVLFVLKKDGTMRMCIDYRKLNQVTIKNKYPLPRIDDLFDQLKG 3139
            L++L FIRP  SPW A VLFV K+DGTMR+CIDYR+LN+VTI+N+YPLPRIDDLFDQLKG
Sbjct: 586  LVDLRFIRPSVSPWGAPVLFVRKQDGTMRLCIDYRQLNKVTIRNRYPLPRIDDLFDQLKG 645

Query: 3138 AMCFTKIDLRMGYHQMRIREEDILKTTFGTCYGHYEFLVMPFGLKNAHAAFMDLMNRVFR 2959
            A  F+KIDLR GYHQ+RIREEDI  T   T YGHYEFLVMPFGL NA AAFMDLMNRVFR
Sbjct: 646  AKYFSKIDLRSGYHQLRIREEDIPNTALRTRYGHYEFLVMPFGLTNAPAAFMDLMNRVFR 705

Query: 2958 PYINQFVVVFIDDVLIYSKSEEEHEKRLQIVLQTLREHKLYAKRSKCEFWISEVLFLGHV 2779
            PY++ FV+VFIDD+L+YS++ E H+K L++VL+TLR  +LYAK SKC+FW+  V+FLGHV
Sbjct: 706  PYLDHFVIVFIDDILVYSQTLEGHKKHLRVVLRTLRRKQLYAKFSKCQFWLDIVVFLGHV 765

Query: 2778 ISDQGIVVDPEKIAAVVEWKLQKNVFEV*SFLGL 2677
            IS +GI VDP+K+ A+V W    +V E+ SFLGL
Sbjct: 766  ISAEGIYVDPQKVEAIVNWVQSTSVTEIRSFLGL 799



 Score =  310 bits (795), Expect(3) = 0.0
 Identities = 163/322 (50%), Positives = 221/322 (68%), Gaps = 5/322 (1%)
 Frame = -2

Query: 2689 FLGIGGYYRRFVENFSRLAVPLTHLTKKGVKFE*TDKCERAFEKLKHRLISAPILTTPEP 2510
            FLG+ GYYRRFVE FS +A PLT LT+K + FE T++CE++F++LK RL +AP+L  P+ 
Sbjct: 796  FLGLAGYYRRFVEGFSSIAAPLTRLTRKDIAFEWTEECEQSFQELKKRLTTAPVLALPDN 855

Query: 2509 RLGYEVYCDASGIGLGGVLMQKGKVIAYASR*LKTYEKNYTTYDLELAAVVFVLKLWRHY 2330
               + +Y DAS  GLG VLMQ  +VIAYASR LK +E+NY  +DLELAAVVF LK+WRHY
Sbjct: 856  AGNFVIYSDASLQGLGCVLMQHDRVIAYASRQLKKHEQNYPVHDLELAAVVFALKIWRHY 915

Query: 2329 LYGENFFVFYDHKSLKYMFIQKDLNMRQIRWFELLKDYEFTLNYHPGKGNVVADALSRKE 2150
            LYGE   +F DHKSLKY F Q++LNMRQ RW EL+KDY+ T+ Y+PG+ NVVADALSRK 
Sbjct: 916  LYGETCQIFTDHKSLKYFFTQRELNMRQRRWLELIKDYDCTIEYYPGRANVVADALSRKT 975

Query: 2149 YGSIASLR-----MIEDVRNLDLVVDFDDEKAFLYHLAVIPEIVKKVIKAQSTDISLQQV 1985
             GS+  LR     ++ ++R   + ++   +   L  L V P +V+++I AQ  D +L ++
Sbjct: 976  TGSLTHLRTTYLPLLVELRKDGVELEMTQQGGILASLHVRPILVERIIVAQLGDPTLCRI 1035

Query: 1984 RGKLSMGEAPVNWSLETNGGIYFKGRLCVPDDEYL*KEILTMAHESVLTLHPGSTKMNYD 1805
            RG++  G    ++++  +G +    RL VP ++YL +EIL  AH S  T+HPGSTKM   
Sbjct: 1036 RGEVESGSRK-DYAIRGDGALVTGTRLHVPKNDYLKREILEEAHCSTYTMHPGSTKMYRT 1094

Query: 1804 LRCQFWWRGMMKDIALFVSRCL 1739
            LR  + W  M  DIA +VSRCL
Sbjct: 1095 LREYYSWPHMKGDIAKYVSRCL 1116



 Score = 93.6 bits (231), Expect = 2e-15
 Identities = 47/127 (37%), Positives = 82/127 (64%), Gaps = 1/127 (0%)
 Frame = -3

Query: 4737 KDKVRFATYMFHGDA*NWWESVQR-MEDMSRMSWKNFVKLFSEKYFPPTAKAAKCMEFMF 4561
            +D+VR AT++  G+A +WW++V+R  E+ + ++W+ F ++FSE+++PP+ + AK  EF++
Sbjct: 113  EDRVRLATFLLKGNAYHWWKAVKRGYENPAAINWEEFQRVFSEQFYPPSYRHAKKSEFLY 172

Query: 4560 LQQGDMTVTQLDKKFAELERYETHLVPTQELKARKLESALKAPIRDKVVSHQHVTYKRFL 4381
            L+QG M+V + + KF EL R+   LV T+E + R+ E  L   I+  + ++   TY    
Sbjct: 173  LKQGSMSVMEYEHKFNELSRFAPELVATEEDRCRRFEEGLWWEIQAVITAN---TYPNMR 229

Query: 4380 RTALAVE 4360
              A AVE
Sbjct: 230  ALAHAVE 236



 Score = 50.1 bits (118), Expect(2) = 2e-06
 Identities = 22/78 (28%), Positives = 45/78 (57%)
 Frame = -2

Query: 3835 VSSPLGSVVSISKVCKDCDLTPGNHRVAINLIPMRMQECDIIVGMDWMSPNQEILHCSEK 3656
            +S P G V+   +V ++C +   +  +  NLIP+ + + DII+GMDW+  +   + C  K
Sbjct: 410  ISLPTGEVLYADRVFRNCFVQVDDAWLEANLIPLDLVDLDIILGMDWLEKHHASVDCFRK 469

Query: 3655 KISFLTMNENRDSVQGER 3602
            +++  +  + + + +GER
Sbjct: 470  EVTLRSPGQPKVTFRGER 487



 Score = 33.5 bits (75), Expect(2) = 2e-06
 Identities = 23/74 (31%), Positives = 34/74 (45%)
 Frame = -3

Query: 4083 GRPQNQSRTVTLAFQPRQPNVQGKLNYVA*GNGGEENTVIEGNFLIFSSRAKVLFDTGAT 3904
            GR   QSR      QP +   Q ++  +          VI G   IF   A+VL D GAT
Sbjct: 331  GRSGRQSRG-----QPGRSTTQARVFSMTQQEAYATPDVITGMIPIFGYLARVLIDPGAT 385

Query: 3903 YSFISLHLAAYLGL 3862
            +SF++ +   Y+ +
Sbjct: 386  HSFVAHNFIPYISI 399


>ref|XP_007213082.1| hypothetical protein PRUPE_ppa021229mg [Prunus persica]
            gi|462408947|gb|EMJ14281.1| hypothetical protein
            PRUPE_ppa021229mg [Prunus persica]
          Length = 1194

 Score =  446 bits (1147), Expect(3) = 0.0
 Identities = 215/375 (57%), Positives = 286/375 (76%)
 Frame = -1

Query: 1736 CQQVKAEHQRPAGPLQPLPIAE*KWDSIAMDFVRGLPKGQQGRDSVWVIIDRLTKSAHFL 1557
            CQQVKAE Q+P+G LQPLPI E KW+ I MDFV  LP+ Q   D VWVI+DRLTKSAHFL
Sbjct: 820  CQQVKAERQKPSGLLQPLPIPEWKWERITMDFVFKLPQTQSKHDGVWVIVDRLTKSAHFL 879

Query: 1556 PVRQADNITTLSNLYIREIVKLHGMPMSIVSDRDPLFTSKFWGRFQLSMGSTLSMSSVFH 1377
            PVR   ++  L+ ++I EIV+LHG+P+SIVSDRDP FTS+FW +   + G+ L  S+ FH
Sbjct: 880  PVRANYSLNKLAKIFIDEIVRLHGVPVSIVSDRDPRFTSRFWTKLNEAFGTQLQFSTAFH 939

Query: 1376 P*TYGQSERTIQVLEYMLRDCALEFKGNWSEQLPLVEFAYNNIY*SSIRMAPFEALYGRP 1197
            P T GQSERTIQ LE+MLR CAL+F+G+W E+LPL+EFAYNN Y  SI M+PF+ALYGR 
Sbjct: 940  PQTDGQSERTIQTLEHMLRACALQFRGDWDEKLPLMEFAYNNSYQVSIGMSPFDALYGRQ 999

Query: 1196 FRTPLCWAEVSDRSVMGPAVVKETTEKIKVIQDRLRTAQSRQKSYAGQRRRPLEFAVGDQ 1017
             RTP  W EV +  ++    V+ T +++++I++RL+TAQ RQKSYA  RR+ L+F VGD 
Sbjct: 1000 CRTPFYWDEVGEHRLVVSEDVELTKKQVQIIRERLKTAQDRQKSYADNRRKDLQFEVGDW 1059

Query: 1016 VFLKVSPRPGIKRFGKKSKLAPRYIGPFEILQRIGEVAYRLALPTSLADVHNVFHVSMLR 837
            VFLK+SP  G+ RFGK+ KL+PRYIGP+EI++ +G VAYRL LP+ LA +H+VFHVSMLR
Sbjct: 1060 VFLKLSPWKGVVRFGKRGKLSPRYIGPYEIIECVGPVAYRLTLPSDLARLHDVFHVSMLR 1119

Query: 836  KYHADPSHIIEWQDIQLNEYVTYEERPLRVVDSK*QVLRNKTIKLVKVIWQHHNSKEMTW 657
            KY +DPSH++E Q ++L    TY E+P++++D K QVLR++ I LVKV+W+ H  +E TW
Sbjct: 1120 KYISDPSHVLEEQPVELEADFTYVEQPVQILDWKTQVLRSREIPLVKVLWRSHTVEEATW 1179

Query: 656  ELESEIRKKYQDLLK 612
            E E ++R++Y  L +
Sbjct: 1180 EPEDQMREQYLHLFE 1194



 Score =  376 bits (965), Expect(3) = 0.0
 Identities = 180/274 (65%), Positives = 221/274 (80%)
 Frame = -3

Query: 3498 KDARIV*EFPDVFPEAFPGLLPKREINFVIDVQSGTAPISLSPYRMAPK*MKDLWKQLDE 3319
            +D  ++ +FPDVFPE  PGL P REI FVI++  GT PIS +PYRMAP  +++L  QL E
Sbjct: 228  EDIPVIQDFPDVFPEDLPGLPPHREIEFVIELAPGTNPISQAPYRMAPAELRELKTQLQE 287

Query: 3318 LLELGFIRPRTSPWRARVLFVLKKDGTMRMCIDYRKLNQVTIKNKYPLPRIDDLFDQLKG 3139
            L++ GFIRP  SPW A VLFV KKDGTMR+C+DYR+LN++T++N+YPLPRIDDLFDQLKG
Sbjct: 288  LVDKGFIRPSFSPWGAPVLFVKKKDGTMRLCVDYRQLNKITVRNRYPLPRIDDLFDQLKG 347

Query: 3138 AMCFTKIDLRMGYHQMRIREEDILKTTFGTCYGHYEFLVMPFGLKNAHAAFMDLMNRVFR 2959
            A  F+KIDLR GYHQ+R+REED+ KT F T YGHYEFLVMPFGL NA AAFMDLMNRVFR
Sbjct: 348  AKVFSKIDLRSGYHQLRVREEDMPKTAFRTRYGHYEFLVMPFGLTNAPAAFMDLMNRVFR 407

Query: 2958 PYINQFVVVFIDDVLIYSKSEEEHEKRLQIVLQTLREHKLYAKRSKCEFWISEVLFLGHV 2779
             Y+++FV+VFIDD+L+YSKS++ H K L +VL+TLR  +LYAK SKC+FW+  V FLGHV
Sbjct: 408  RYLDRFVIVFIDDILVYSKSQKAHMKHLNLVLRTLRRRQLYAKFSKCQFWLDRVSFLGHV 467

Query: 2778 ISDQGIVVDPEKIAAVVEWKLQKNVFEV*SFLGL 2677
            IS +GI VDP+KI AVV W    +V E+ SFLGL
Sbjct: 468  ISAEGIYVDPQKIEAVVNWLRPTSVTEIRSFLGL 501



 Score =  332 bits (852), Expect(3) = 0.0
 Identities = 173/322 (53%), Positives = 227/322 (70%), Gaps = 5/322 (1%)
 Frame = -2

Query: 2689 FLGIGGYYRRFVENFSRLAVPLTHLTKKGVKFE*TDKCERAFEKLKHRLISAPILTTPEP 2510
            FLG+ GYYRRFVE FS +A PLT+LT+KGVKF  +DKCE +F +LK RL +AP+L  P+ 
Sbjct: 498  FLGLAGYYRRFVEGFSTIAAPLTYLTRKGVKFVWSDKCEESFIELKTRLTTAPVLALPDD 557

Query: 2509 RLGYEVYCDASGIGLGGVLMQKGKVIAYASR*LKTYEKNYTTYDLELAAVVFVLKLWRHY 2330
               + +Y DAS  GLG VLMQ G+VIAYASR LK +E NY  +DLELAAVVF LK+WRHY
Sbjct: 558  SGNFVIYSDASQQGLGCVLMQHGRVIAYASRQLKKHELNYPVHDLELAAVVFALKIWRHY 617

Query: 2329 LYGENFFVFYDHKSLKYMFIQKDLNMRQIRWFELLKDYEFTLNYHPGKGNVVADALSRKE 2150
            LYGE   +F DHKSLKY+F QK+LN+RQ RW EL+KDY+ T+ +HPG+ NVVADALSRK 
Sbjct: 618  LYGETCQIFTDHKSLKYLFTQKELNLRQRRWLELIKDYDCTIEHHPGRANVVADALSRKS 677

Query: 2149 YGSIASLR-----MIEDVRNLDLVVDFDDEKAFLYHLAVIPEIVKKVIKAQSTDISLQQV 1985
             GSIA LR     ++ ++R L + +D D++ A L  L V P +V++++ AQS D  +  +
Sbjct: 678  SGSIAYLRGRYLPLMVEMRKLRIGLDVDNQGALLATLHVRPVLVERILAAQSQDPLICTL 737

Query: 1984 RGKLSMGEAPVNWSLETNGGIYFKGRLCVPDDEYL*KEILTMAHESVLTLHPGSTKMNYD 1805
            R +++ G+   + S+  +G +    RL VP+DE L +EIL  AHES   +HPGSTKM + 
Sbjct: 738  RVEVANGDR-TDCSVRNDGALMVGNRLYVPNDEALKREILEEAHESAFAMHPGSTKMYHT 796

Query: 1804 LRCQFWWRGMMKDIALFVSRCL 1739
            LR  +WW  M K IA +V RCL
Sbjct: 797  LREHYWWPFMKKQIAEYVRRCL 818


>gb|AEV42258.1| hypothetical protein [Beta vulgaris]
          Length = 1553

 Score =  440 bits (1131), Expect(3) = 0.0
 Identities = 198/375 (52%), Positives = 289/375 (77%)
 Frame = -1

Query: 1736 CQQVKAEHQRPAGPLQPLPIAE*KWDSIAMDFVRGLPKGQQGRDSVWVIIDRLTKSAHFL 1557
            CQ+VK+EH+RP G +QPL I   KWDSI+MDFV  LP+ + G +++WVI+DRLTK+A F+
Sbjct: 1148 CQKVKSEHKRPQGKIQPLDIPTWKWDSISMDFVVALPRSRGGNNTIWVIVDRLTKTARFI 1207

Query: 1556 PVRQADNITTLSNLYIREIVKLHGMPMSIVSDRDPLFTSKFWGRFQLSMGSTLSMSSVFH 1377
            P++   ++  L+  Y++ +++LHG+P SIVSD+D  F S FW + Q + GS L MS+ FH
Sbjct: 1208 PMKDTWSMEALAKAYVKNVIRLHGVPTSIVSDQDSRFLSNFWKKVQEAFGSELLMSTAFH 1267

Query: 1376 P*TYGQSERTIQVLEYMLRDCALEFKGNWSEQLPLVEFAYNNIY*SSIRMAPFEALYGRP 1197
            P T GQ+ERTIQ LE MLR CALE++G+W + L L+EF+YNN Y +SI+MAPFEALYGR 
Sbjct: 1268 PATDGQTERTIQTLEDMLRACALEYQGSWEDHLDLIEFSYNNSYHASIKMAPFEALYGRK 1327

Query: 1196 FRTPLCWAEVSDRSVMGPAVVKETTEKIKVIQDRLRTAQSRQKSYAGQRRRPLEFAVGDQ 1017
             R+PLCW ++S+  V+GP +++ET ++++VIQ++++TAQ RQKSYA Q+RR   F VG++
Sbjct: 1328 CRSPLCWNDISETVVLGPDMIQETMDQVRVIQEKIKTAQDRQKSYADQKRRDENFEVGEK 1387

Query: 1016 VFLKVSPRPGIKRFGKKSKLAPRYIGPFEILQRIGEVAYRLALPTSLADVHNVFHVSMLR 837
            V LKVSP  G+ RFGKK KL+P++IGP+EIL R+G+VAYRL LP  L  VHNVFHVS LR
Sbjct: 1388 VLLKVSPMKGVMRFGKKGKLSPKFIGPYEILARVGKVAYRLDLPNDLERVHNVFHVSQLR 1447

Query: 836  KYHADPSHIIEWQDIQLNEYVTYEERPLRVVDSK*QVLRNKTIKLVKVIWQHHNSKEMTW 657
            +Y  D SH++E ++++++E ++YEE+P++++D K +  RNK +++VKV+W++  ++E TW
Sbjct: 1448 RYVPDASHVLEPENVEIDETLSYEEKPVQILDRKVRSTRNKDVRIVKVLWRNQTTEEATW 1507

Query: 656  ELESEIRKKYQDLLK 612
            E E  +R KY +L +
Sbjct: 1508 EAEDAMRLKYPELFQ 1522



 Score =  382 bits (982), Expect(3) = 0.0
 Identities = 222/477 (46%), Positives = 291/477 (61%), Gaps = 25/477 (5%)
 Frame = -3

Query: 4032 QPNVQGKLNYVA*GNGGEENTVIEGNFLIFSSRAKVLFDTGATYSFISLHLAAYLGL-NY 3856
            Q   +GKL  +          V+ G F I S+  KVLFD+GA+ SFI+      L L   
Sbjct: 373  QDKGKGKLYMMTAREEEARRDVVTGTFSINSTPVKVLFDSGASLSFIAHATVRNLTLVES 432

Query: 3855 DFLEFNLYPLHLEVLLVSVRYVRIVI*PLETIE--WPSTLYL*ECRNVTLL*A--WIGCH 3688
            + +   +     E +  S R++++   PL+  E  +PS L      N+ ++    W+G +
Sbjct: 433  ESISMPIVIPSGETVNCSKRFLKV---PLKIGEGYFPSDLIEFNLSNLDIILGMDWLGKY 489

Query: 3687 RTRRYCIVLKRKFLF*Q*MRTVILFKGRGGRLILHHFHLRRDEMRQRNI*HI*RI*RRRN 3508
              R  C   K            +  K   G+ + +    R   ++  N   +      +N
Sbjct: 490  MARIDCDAQK------------VELKDPSGKRVSYRRIPREPGIKVINALQL------KN 531

Query: 3507 KVTK--------------------DARIV*EFPDVFPEAFPGLLPKREINFVIDVQSGTA 3388
             V K                    D  IV EF DVFPE  PG+ P+R++ F +D+  GT 
Sbjct: 532  YVDKGWPLFMCSVRRVEDDPLRPEDVPIVREFQDVFPEEIPGMPPRRDVEFTVDLVPGTG 591

Query: 3387 PISLSPYRMAPK*MKDLWKQLDELLELGFIRPRTSPWRARVLFVLKKDGTMRMCIDYRKL 3208
            PIS + YRMAP  M +L  QL+ELL+ G+IRP  SPW A VLFV KKDG++R+CIDYR+L
Sbjct: 592  PISKATYRMAPAEMNELKNQLEELLDKGYIRPSMSPWGAPVLFVKKKDGSLRLCIDYREL 651

Query: 3207 NQVTIKNKYPLPRIDDLFDQLKGAMCFTKIDLRMGYHQMRIREEDILKTTFGTCYGHYEF 3028
            N VT+KNKYPLPRIDDLFDQL+GA  F+KIDLR GYHQ+RI + DI KT F T YGHYEF
Sbjct: 652  NNVTVKNKYPLPRIDDLFDQLQGAGMFSKIDLRSGYHQLRIVDHDIPKTAFRTRYGHYEF 711

Query: 3027 LVMPFGLKNAHAAFMDLMNRVFRPYINQFVVVFIDDVLIYSKSEEEHEKRLQIVLQTLRE 2848
             VMPFGL NA A FMDLMNR+FRPY+++FVVVFIDD+LIYSK++EEHE  L+++LQTLR+
Sbjct: 712  TVMPFGLTNAPAVFMDLMNRIFRPYLDKFVVVFIDDILIYSKNKEEHEDHLRVILQTLRD 771

Query: 2847 HKLYAKRSKCEFWISEVLFLGHVISDQGIVVDPEKIAAVVEWKLQKNVFEV*SFLGL 2677
            ++LYAK SKCEFW+  V FLGH IS +G++VDP KI AV EW   KNV ++ SFLGL
Sbjct: 772  NQLYAKFSKCEFWLERVSFLGHFISKEGVLVDPAKIKAVSEWPTPKNVTDIRSFLGL 828



 Score =  315 bits (808), Expect(3) = 0.0
 Identities = 164/327 (50%), Positives = 221/327 (67%), Gaps = 6/327 (1%)
 Frame = -2

Query: 2689 FLGIGGYYRRFVENFSRLAVPLTHLTKKGVKFE*TDKCERAFEKLKHRLISAPILTTPEP 2510
            FLG+ GYYRRFV++FS++A P+T+L KK  +F   +  E+AF+ LK RL SAP+LT P  
Sbjct: 825  FLGLAGYYRRFVKDFSKIAKPMTNLMKKDCRFTWNEDSEKAFQTLKERLTSAPVLTLPNG 884

Query: 2509 RLGYEVYCDASGIGLGGVLMQKGKVIAYASR*LKTYEKNYTTYDLELAAVVFVLKLWRHY 2330
              GY+VY DAS  GLG VLMQ GKVIAYASR LK YE NY T+DLELAA+VF LK+WRHY
Sbjct: 885  NEGYDVYSDASKNGLGCVLMQNGKVIAYASRQLKPYEVNYPTHDLELAAIVFALKIWRHY 944

Query: 2329 LYGENFFVFYDHKSLKYMFIQKDLNMRQIRWFELLKDYEFTLNYHPGKGNVVADALSRKE 2150
            LYG    +F DHKSLKY+F QKDLNMRQ RW EL+KDY+  + YH GK NVVADALSRK 
Sbjct: 945  LYGVTCRIFTDHKSLKYIFTQKDLNMRQRRWLELIKDYDLDIQYHEGKANVVADALSRKS 1004

Query: 2149 YGSIASL----RMIEDVRNLDLVVDFDDE-KAFLYHLAVIPEIVKKVIKAQSTDISLQQV 1985
              S+ +L    ++ E+   L + V  + E +  L  L + P  ++++  +Q  D+ L++V
Sbjct: 1005 SHSLNTLVVADKLCEEFSRLQIEVVHEGEVERLLSALTIEPNFLEEIRASQPGDVKLERV 1064

Query: 1984 RGKLSMGEAPVNWSLETNGGIYFKGRLCVPDD-EYL*KEILTMAHESVLTLHPGSTKMNY 1808
            + KL  G+A   +++  +G I +KGR CVP   E L ++I++  H +   +HPG  K+  
Sbjct: 1065 KAKLKEGKAE-GFAIHEDGSIRYKGRWCVPQKCEELKQKIMSEGHNTTYYVHPGGDKLYK 1123

Query: 1807 DLRCQFWWRGMMKDIALFVSRCLSVNK 1727
            DL+  FWW GM + +A FVS+CL+  K
Sbjct: 1124 DLKKMFWWPGMKRAVAEFVSKCLTCQK 1150



 Score = 77.4 bits (189), Expect = 2e-10
 Identities = 37/105 (35%), Positives = 57/105 (54%), Gaps = 1/105 (0%)
 Frame = -3

Query: 4728 VRFATYMFHGDA*NWW-ESVQRMEDMSRMSWKNFVKLFSEKYFPPTAKAAKCMEFMFLQQ 4552
            V  A+Y   GDA  WW ++   +       W+ F K   +KY+PP  K  K  EFM L+Q
Sbjct: 81   VPLASYYLQGDAHFWWTQAKDNLLSQPGFGWETFKKALRDKYYPPYLKKQKAQEFMMLEQ 140

Query: 4551 GDMTVTQLDKKFAELERYETHLVPTQELKARKLESALKAPIRDKV 4417
            G+M+V +  +KF EL R+   + PT+E KA + E  L   ++ ++
Sbjct: 141  GNMSVEEYYRKFIELMRFAPEIAPTEEAKASRFELGLTLDLQGRL 185


>emb|CAN66189.1| hypothetical protein VITISV_006047 [Vitis vinifera]
          Length = 1573

 Score =  433 bits (1113), Expect(3) = 0.0
 Identities = 205/331 (61%), Positives = 267/331 (80%)
 Frame = -1

Query: 1736 CQQVKAEHQRPAGPLQPLPIAE*KWDSIAMDFVRGLPKGQQGRDSVWVIIDRLTKSAHFL 1557
            CQQVKAEHQRPA  LQPLPI + KWD+I MDFV GLP+ +  ++ VWVI+DRLTKSAHFL
Sbjct: 1243 CQQVKAEHQRPAELLQPLPIPKWKWDNITMDFVIGLPRTRSKKNGVWVIVDRLTKSAHFL 1302

Query: 1556 PVRQADNITTLSNLYIREIVKLHGMPMSIVSDRDPLFTSKFWGRFQLSMGSTLSMSSVFH 1377
             ++  D++ +L+ LYI+EIV+LHG+P+SIVSDRDP FTS+FW   Q ++G+ L+ S+VFH
Sbjct: 1303 AMKTTDSMNSLAKLYIQEIVRLHGIPVSIVSDRDPKFTSQFWQSLQRALGTQLNFSTVFH 1362

Query: 1376 P*TYGQSERTIQVLEYMLRDCALEFKGNWSEQLPLVEFAYNNIY*SSIRMAPFEALYGRP 1197
            P T GQSER IQ+LE MLR C L+F GNW++ LPL EFAYNN Y SSI MAP+EALYGRP
Sbjct: 1363 PQTDGQSERVIQILEDMLRACVLDFGGNWADYLPLAEFAYNNXYQSSIGMAPYEALYGRP 1422

Query: 1196 FRTPLCWAEVSDRSVMGPAVVKETTEKIKVIQDRLRTAQSRQKSYAGQRRRPLEFAVGDQ 1017
             R+PLCW E+ +  ++GP +V+ETTEKI++I+++L+TAQ RQK+YA +RRRPLEF  GD 
Sbjct: 1423 CRSPLCWIEMGESHLLGPEIVQETTEKIQLIKEKLKTAQDRQKNYADKRRRPLEFEEGDW 1482

Query: 1016 VFLKVSPRPGIKRFGKKSKLAPRYIGPFEILQRIGEVAYRLALPTSLADVHNVFHVSMLR 837
            VF+KVSPR GI RFGKK KLAPR++GPF+I +R+G V Y+L LP  L+ VH+VFHVSMLR
Sbjct: 1483 VFVKVSPRRGIFRFGKKGKLAPRFVGPFQIDKRVGPVTYKLILPQQLSLVHDVFHVSMLR 1542

Query: 836  KYHADPSHIIEWQDIQLNEYVTYEERPLRVV 744
            K   DP+ +++ QD+Q++E  +Y E PLR++
Sbjct: 1543 KCTPDPTWVVDLQDVQISEDTSYVEEPLRIL 1573



 Score =  419 bits (1078), Expect(3) = 0.0
 Identities = 286/723 (39%), Positives = 379/723 (52%), Gaps = 38/723 (5%)
 Frame = -3

Query: 4731 KVRFATYMFHGDA*NWWESVQRMEDMSRMSWKNFVKLFSEKYFPPTAKAAKCMEFMFLQQ 4552
            +V  ATYM    A  WWES++R+ D   M+W+ F ++F  KYF   AK AK MEF  L Q
Sbjct: 248  RVGLATYMLVDKADFWWESMKRVYDTEVMTWEEFERIFLGKYFGEVAKHAKRMEFEHLIQ 307

Query: 4551 GDMTVTQLDKKFAELERYETHLVPTQELKARKLESALKAPIRDKVVSHQHVTYKRFLRTA 4372
            G M V + + +F+EL R+   ++  +  KAR+ +  L+  IR+++V      Y   ++ A
Sbjct: 308  GTMLVLEYESRFSELSRFALGMISEEGEKARRFQQGLRPIIRNRLVPLAIRDYSELVKRA 367

Query: 4371 LAVEAN---WVQILXXXXXXXXXXXXXXXXXXXXXXXXTNYVAKKDNMTGSE-------- 4225
            L VE +     QI                         T    ++ +    E        
Sbjct: 368  LLVEQDIDETNQIREQKGDKKGKQRMGESSQGPQQRQRTQQFERRPSFYAGEGQIAQRAA 427

Query: 4224 ----YYNCGQVGHFDRECPLXXXXXXXXXXXXXXXXXVCRPQNHPCTQNIGGRPQNQSRT 4057
                 Y CG   H  R CPL                    PQ  P  Q         +RT
Sbjct: 428  TNRVCYGCGAGDHLWRACPLRGAQXAQPQSQGSSQQQPM-PQLPPAAQG--------TRT 478

Query: 4056 VTLAFQPRQPN----------VQGKLNYVA*GNGGEENTVIEGNFLIFSSRAKVLFDTGA 3907
             T+  Q R               G++  +      ++  ++EG  L++S+  +VLFDTGA
Sbjct: 479  TTMNSQTRSSQGSNARGRGRPAAGRVFALTPTEPDKDALLVEGMILVYSTWVRVLFDTGA 538

Query: 3906 TYSFISLHLAAYLGLNYDFLEFNLY---PLHLE----------VLLVSVRYVRIVI*PLE 3766
            T+SFIS   A  LGL  + +E  L    P+             V+ ++ R + + +  L+
Sbjct: 539  THSFISASCANALGLKSERVENLLLIESPMGTNSRVDRICKGCVITLADRALNVDLRILD 598

Query: 3765 TIEWPSTLYL*ECRNVTLL*AWIGCHRTRRYCIVLKRKFLF*Q*MRTVILFKGRGGRLIL 3586
               +   L +     + +  A I CHR RR    L   F      R V L KG    L  
Sbjct: 599  MTGYDVILGM---DWLAVYRAVIDCHR-RRIIFCLPEGFESDPCYRYV-LRKGSINFLAC 653

Query: 3585 HHFHLRRDEMRQRNI*HI*RI*RRRNKVTKDARIV*EFPDVFPEAFPGLLPKREINFVID 3406
                LR  E  Q++I  I               +V +F DVFP+  PGL P RE +F I+
Sbjct: 654  ----LRGKEKAQKDITEI--------------PVVRKFQDVFPDELPGLPPHREFDFSIE 695

Query: 3405 VQSGTAPISLSPYRMAPK*MKDLWKQLDELLELGFIRPRTSPWRARVLFVLKKDGTMRMC 3226
            V  GT PIS+SPYRMAP  +K+L  QLDELL  GFIRP TSPW A VLFV KKD T+R+C
Sbjct: 696  VYPGTDPISVSPYRMAPLELKELKTQLDELLGKGFIRPSTSPWGAPVLFVKKKDDTLRLC 755

Query: 3225 IDYRKLNQVTIKNKYPLPRIDDLFDQLKGAMCFTKIDLRMGYHQMRIREEDILKTTFGTC 3046
            I+YRKLN+VT+KNKYPLPRIDDL               R GYHQ+R+RE+D+ KT F T 
Sbjct: 756  IEYRKLNRVTVKNKYPLPRIDDL---------------RTGYHQLRVREDDVSKTAFRTR 800

Query: 3045 YGHYEFLVMPFGLKNAHAAFMDLMNRVFRPYINQFVVVFIDDVLIYSKSEEEHEKRLQIV 2866
            YG+YEFLVMPFGL NA AAFMDLMNRVFR Y+++FV+VF+DD+LIYS+S EEH++ L   
Sbjct: 801  YGNYEFLVMPFGLTNAPAAFMDLMNRVFRAYLDRFVIVFVDDILIYSRSLEEHKQHLVTT 860

Query: 2865 LQTLREHKLYAKRSKCEFWISEVLFLGHVISDQGIVVDPEKIAAVVEWKLQKNVFEV*SF 2686
            L TLR H+LY K  K EFW++EV FLGHV+S+ GI VD  K+ A+ EW+   NVFEV SF
Sbjct: 861  LGTLRRHQLYGKLDKSEFWLTEVNFLGHVVSEAGIAVDHSKVEAIQEWQRPTNVFEVRSF 920

Query: 2685 LGL 2677
            LGL
Sbjct: 921  LGL 923



 Score =  351 bits (901), Expect(3) = 0.0
 Identities = 172/321 (53%), Positives = 228/321 (71%), Gaps = 5/321 (1%)
 Frame = -2

Query: 2689 FLGIGGYYRRFVENFSRLAVPLTHLTKKGVKFE*TDKCERAFEKLKHRLISAPILTTPEP 2510
            FLG+ GYYRRFVE+FSR+A P+T LT+K VKF+  ++CE AF++LK +L +AP+LT P  
Sbjct: 920  FLGLAGYYRRFVEDFSRIAAPMTQLTRKWVKFDWNEECENAFQELKQKLTTAPVLTAPIS 979

Query: 2509 RLGYEVYCDASGIGLGGVLMQKGKVIAYASR*LKTYEKNYTTYDLELAAVVFVLKLWRHY 2330
               + +YCDAS +GLG VLMQ+GKV+AYASR LK +E+NY  +DLELAA+VF LK W HY
Sbjct: 980  GELFMIYCDASTVGLGCVLMQQGKVVAYASRQLKQHERNYLAHDLELAAMVFALKTWIHY 1039

Query: 2329 LYGENFFVFYDHKSLKYMFIQKDLNMRQIRWFELLKDYEFTLNYHPGKGNVVADALSRKE 2150
            LYGE F V+ DHKSLKY+F QKDLN RQ RW E L+DY+F L+YHPGK NVVADALSRK 
Sbjct: 1040 LYGEKFEVYSDHKSLKYIFTQKDLNSRQRRWMETLEDYDFALHYHPGKANVVADALSRKS 1099

Query: 2149 YGSIASL-----RMIEDVRNLDLVVDFDDEKAFLYHLAVIPEIVKKVIKAQSTDISLQQV 1985
            YG + SL      M   + + +L +  +     LY ++  P +++++++AQ  D  L++V
Sbjct: 1100 YGQLFSLGLREFEMYAVIEDFELCLVQEGRGPCLYSISARPMVIQRIVEAQVHDEFLEKV 1159

Query: 1984 RGKLSMGEAPVNWSLETNGGIYFKGRLCVPDDEYL*KEILTMAHESVLTLHPGSTKMNYD 1805
            + +L  GE   NWS+  +G + FKGRLCVP D  L  E+L  AH +  T+HPG+TKM  D
Sbjct: 1160 KAQLVAGEIDENWSMYEDGSVRFKGRLCVPKDVELRNELLADAHRAKYTIHPGNTKMYQD 1219

Query: 1804 LRCQFWWRGMMKDIALFVSRC 1742
            L+ QF W GM +DIA FV+ C
Sbjct: 1220 LKRQFXWSGMKRDIAQFVANC 1240


>gb|ABB47191.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
            Japonica Group]
          Length = 1443

 Score =  405 bits (1042), Expect(3) = 0.0
 Identities = 195/373 (52%), Positives = 262/373 (70%)
 Frame = -1

Query: 1736 CQQVKAEHQRPAGPLQPLPIAE*KWDSIAMDFVRGLPKGQQGRDSVWVIIDRLTKSAHFL 1557
            CQ+VKAEHQ+PAG LQPL I E KW+ I MDF+ GLP+   G DS+WVI+DRLTK A+F+
Sbjct: 1058 CQRVKAEHQKPAGLLQPLKIPEWKWEEIGMDFITGLPRTSSGHDSIWVIVDRLTKVAYFI 1117

Query: 1556 PVRQADNITTLSNLYIREIVKLHGMPMSIVSDRDPLFTSKFWGRFQLSMGSTLSMSSVFH 1377
            PV+   + + L+ LY+  IV LHG+P  IVSDR   FTS FW + Q  MGS L+ S+ +H
Sbjct: 1118 PVKTTYSGSRLAELYMARIVCLHGVPKKIVSDRGSQFTSNFWKKLQEEMGSKLNFSTAYH 1177

Query: 1376 P*TYGQSERTIQVLEYMLRDCALEFKGNWSEQLPLVEFAYNNIY*SSIRMAPFEALYGRP 1197
            P T GQ+ER  Q+LE MLR CAL+F G+W + LP  EF+YNN Y +S++MAP+EALYGR 
Sbjct: 1178 PQTDGQTERVNQILEDMLRACALDFGGSWDKNLPYAEFSYNNSYQASLQMAPYEALYGRK 1237

Query: 1196 FRTPLCWAEVSDRSVMGPAVVKETTEKIKVIQDRLRTAQSRQKSYAGQRRRPLEFAVGDQ 1017
             RTPL W +  +R V G  +++E  EK+K+IQ+RLR AQSR KSYA  RRR L F  GD 
Sbjct: 1238 CRTPLLWDQTGERQVFGTDILREAEEKVKIIQERLRVAQSRHKSYADNRRRDLSFEEGDY 1297

Query: 1016 VFLKVSPRPGIKRFGKKSKLAPRYIGPFEILQRIGEVAYRLALPTSLADVHNVFHVSMLR 837
            V+L+V+P  G+ RF  K KLAPR++GP++I+ R GEVAY+L LP SLA VHNVFHVS L+
Sbjct: 1298 VYLRVTPFRGVHRFHTKGKLAPRFVGPYKIVSRRGEVAYQLELPQSLAGVHNVFHVSQLK 1357

Query: 836  KYHADPSHIIEWQDIQLNEYVTYEERPLRVVDSK*QVLRNKTIKLVKVIWQHHNSKEMTW 657
            K    P+       I++ E +TY E+P+R++++  +  RN+ I+  KV W +H+ +E TW
Sbjct: 1358 KSLRVPTEEANLDQIEVQEDLTYVEKPIRILETNERRTRNRVIRFCKVQWSNHSEEESTW 1417

Query: 656  ELESEIRKKYQDL 618
            E E E++  +  L
Sbjct: 1418 EREDELKSAHPHL 1430



 Score =  405 bits (1040), Expect(3) = 0.0
 Identities = 258/704 (36%), Positives = 372/704 (52%), Gaps = 17/704 (2%)
 Frame = -3

Query: 4737 KDKVRFATYMFHGDA*NWWESVQRMEDMSR-MSWKNFVKLFSEKYFPPTAKAAKCMEFMF 4561
            ++KV FA++  HG A  WW+  +     +  ++W  F   F + + P    + K  EF  
Sbjct: 99   QEKVSFASHQLHGPASEWWDHFRLNRITAEPITWLEFTAAFRKTHIPSGVVSLKKKEFRS 158

Query: 4560 LQQGDMTVTQLDKKFAELERYETHLVPTQELKARKLESALKAPIRDKVVSHQHVTYKRFL 4381
            L QG  +VT+   +F  L RY    V   E +  K    L   +   +++  +  +++ +
Sbjct: 159  LTQGSRSVTEYLHEFNRLARYAPEDVRNDEERQEKFLEGLNDELSYPLMTGDYPDFQKLV 218

Query: 4380 RTALAVEANWVQILXXXXXXXXXXXXXXXXXXXXXXXXTNYV----------AKKDNMTG 4231
              A+  E  + ++                            V          AK++   G
Sbjct: 219  DKAIRQEDKYNRMEQKKRRIAHFKAQQGSNQKPRLTLGPQSVPHGAPTQQQPAKREQ--G 276

Query: 4230 SE---YYNCGQVGHFDRECPLXXXXXXXXXXXXXXXXXVCRPQNHPCTQNIGGRPQNQSR 4060
            S+    +NCG  GH+  +CP                    +P+           P   + 
Sbjct: 277  SKPVVCFNCGDPGHYADKCP--------------------KPRRVKVV------PAQNNS 310

Query: 4059 TVTLAFQPRQPNVQGKLNYVA*GNGGEENTVIEGNFLIFSSRAKVLFDTGATYSFISLHL 3880
            TV        P  + ++N+VA     +   VI G F + S  A VLFD+GAT+SF+S+  
Sbjct: 311  TV--------PASKARVNHVAAAEAQDAPDVILGTFPVNSVPATVLFDSGATHSFLSMSF 362

Query: 3879 AAYLGLNYDFLEFNLYPLHLEVLLVSVRYVRIVI*PLETIEWPSTLYL*ECRNVTLL*A- 3703
            A   G+  + L   L         +S++    V   ++ + + + L L E +++ ++   
Sbjct: 363  AGNHGMEVEDLRRPLMVSTPSDQALSLQRSPSVRIEIKGVPFLANLILLESKDLDVILGM 422

Query: 3702 -WIGCHRTRRYCIVLKRKFLF*Q*MRTVILFKGRGGRLILHHFHLRRDEMRQRNI*HI*R 3526
             W+  H+    C   K            +      GR++  H  L  + +R +       
Sbjct: 423  DWLARHKGVIDCANRK------------VTLTSNDGRVVTVHA-LSSESLRSK------- 462

Query: 3525 I*RRRNKVT-KDARIV*EFPDVFPEAFPGLLPKREINFVIDVQSGTAPISLSPYRMAPK* 3349
                 N++T ++  IV E+PDVFP+  PG+ PKR+I F ID+  GT PI   PYRMA   
Sbjct: 463  ----LNQITLEEIPIVREYPDVFPDDLPGMPPKRDIEFRIDLVPGTTPIHKRPYRMAANE 518

Query: 3348 MKDLWKQLDELLELGFIRPRTSPWRARVLFVLKKDGTMRMCIDYRKLNQVTIKNKYPLPR 3169
            + ++ +Q+D+LL+ G+IRP +SPW A V+FV KKD T RMC+DYR LN VTIKNKYPLPR
Sbjct: 519  LAEVKRQVDDLLQKGYIRPSSSPWGAPVIFVEKKDHTQRMCVDYRALNDVTIKNKYPLPR 578

Query: 3168 IDDLFDQLKGAMCFTKIDLRMGYHQMRIREEDILKTTFGTCYGHYEFLVMPFGLKNAHAA 2989
            IDDLFDQLKGA  F+KIDLR GYHQ+RI+EEDI KT F T YG +E  VM FGL NA A 
Sbjct: 579  IDDLFDQLKGATVFSKIDLRSGYHQLRIKEEDIPKTAFTTRYGLFECTVMSFGLTNAPAF 638

Query: 2988 FMDLMNRVFRPYINQFVVVFIDDVLIYSKSEEEHEKRLQIVLQTLREHKLYAKRSKCEFW 2809
            FM+LMN+VF  Y+++FVVVFIDD+LIYS+++EEHE+ L++ L+ LREH+LYAK SKCEFW
Sbjct: 639  FMNLMNKVFMEYLDKFVVVFIDDILIYSRTKEEHEEHLRLALEKLREHQLYAKFSKCEFW 698

Query: 2808 ISEVLFLGHVISDQGIVVDPEKIAAVVEWKLQKNVFEV*SFLGL 2677
            +SEV FLGHVIS  G+ VDP  + +V  WK  K V E+ SFLGL
Sbjct: 699  LSEVKFLGHVISAGGVAVDPSNVESVTNWKQPKTVSEIRSFLGL 742



 Score =  324 bits (830), Expect(3) = 0.0
 Identities = 160/321 (49%), Positives = 229/321 (71%), Gaps = 5/321 (1%)
 Frame = -2

Query: 2689 FLGIGGYYRRFVENFSRLAVPLTHLTKKGVKFE*TDKCERAFEKLKHRLISAPILTTPEP 2510
            FLG+ GYYRRF+ENFS++A P+T L +K VK++ +++CE++F++LK+RLISAPIL  P+P
Sbjct: 739  FLGLAGYYRRFIENFSKIAKPMTRLLQKDVKYKWSEECEQSFQELKNRLISAPILILPDP 798

Query: 2509 RLGYEVYCDASGIGLGGVLMQKGKVIAYASR*LKTYEKNYTTYDLELAAVVFVLKLWRHY 2330
            + G++VYCDAS +GLG VLMQ GKV+AYASR L+ +EKNY T+DLELAAVV  LK+WRHY
Sbjct: 799  KKGFQVYCDASKLGLGCVLMQDGKVVAYASRQLRPHEKNYPTHDLELAAVVHALKIWRHY 858

Query: 2329 LYGENFFVFYDHKSLKYMFIQKDLNMRQIRWFELLKDYEFTLNYHPGKGNVVADALSRKE 2150
            L+G    V+ DHKSLKY+F Q DLNMRQ RW EL+KDY+  ++YHPGK NVVADALSRK 
Sbjct: 859  LFGTRTEVYTDHKSLKYIFTQPDLNMRQRRWLELIKDYDMGIHYHPGKANVVADALSRKG 918

Query: 2149 Y-----GSIASLRMIEDVRNLDLVVDFDDEKAFLYHLAVIPEIVKKVIKAQSTDISLQQV 1985
            Y     G    L + ++   L+L +     + F+  L   P ++ +V +AQ  D  +Q++
Sbjct: 919  YCKATEGRQLPLELCKEFERLNLGI---VSRGFVAALEAKPTLIDQVREAQINDPDIQEI 975

Query: 1984 RGKLSMGEAPVNWSLETNGGIYFKGRLCVPDDEYL*KEILTMAHESVLTLHPGSTKMNYD 1805
            +  +  G+A + +  +  G ++   R+CVPD++ L   IL  AH+++ ++HPGSTKM  D
Sbjct: 976  KKNMRRGKA-IGFLEDEQGTVWLGERICVPDNKDLKDAILKEAHDTLYSIHPGSTKMYQD 1034

Query: 1804 LRCQFWWRGMMKDIALFVSRC 1742
            L+ +FWW  M ++IA +V+ C
Sbjct: 1035 LKERFWWASMKREIAEYVAVC 1055


>emb|CAN77191.1| hypothetical protein VITISV_006389 [Vitis vinifera]
          Length = 1387

 Score =  470 bits (1209), Expect(3) = 0.0
 Identities = 224/373 (60%), Positives = 289/373 (77%)
 Frame = -1

Query: 1736 CQQVKAEHQRPAGPLQPLPIAE*KWDSIAMDFVRGLPKGQQGRDSVWVIIDRLTKSAHFL 1557
            CQQVKAEHQRPAG LQPLPI E KWD+I MDFV GLP+ +  ++ VW+I+DRLTKS HFL
Sbjct: 1011 CQQVKAEHQRPAGLLQPLPIPEWKWDNITMDFVIGLPRTRSKKNGVWMIVDRLTKSTHFL 1070

Query: 1556 PVRQADNITTLSNLYIREIVKLHGMPMSIVSDRDPLFTSKFWGRFQLSMGSTLSMSSVFH 1377
             ++  D++ +L+ LYI+EIV+LHG+P+SIVSDRDP FTS+FW   Q ++G+ L+ S+ FH
Sbjct: 1071 AMKTIDSMNSLAKLYIQEIVRLHGIPVSIVSDRDPKFTSQFWQSLQRTLGTQLNFSTAFH 1130

Query: 1376 P*TYGQSERTIQVLEYMLRDCALEFKGNWSEQLPLVEFAYNNIY*SSIRMAPFEALYGRP 1197
            P T GQSER IQ+LE MLR C L+F GNW++ LPL EFAYNN Y SSI M  +EALYGRP
Sbjct: 1131 PQTDGQSERVIQILEDMLRACVLDFGGNWADYLPLAEFAYNNSYQSSIGMXTYEALYGRP 1190

Query: 1196 FRTPLCWAEVSDRSVMGPAVVKETTEKIKVIQDRLRTAQSRQKSYAGQRRRPLEFAVGDQ 1017
             R+PLCW E+ +  ++GP +V+ET EKI++I+++L+TAQ RQKSYA +RRRPLEF  GD 
Sbjct: 1191 CRSPLCWIEMGESRLLGPEIVQETXEKIQLIKEKLKTAQDRQKSYADKRRRPLEFEEGDW 1250

Query: 1016 VFLKVSPRPGIKRFGKKSKLAPRYIGPFEILQRIGEVAYRLALPTSLADVHNVFHVSMLR 837
            VF+KVSPR GI RFGKK KLAPR++GPF+I +R+G VAY+L LP  L+ VH+VFHVSMLR
Sbjct: 1251 VFVKVSPRRGIFRFGKKGKLAPRFVGPFQIDKRVGPVAYKLILPQQLSLVHDVFHVSMLR 1310

Query: 836  KYHADPSHIIEWQDIQLNEYVTYEERPLRVVDSK*QVLRNKTIKLVKVIWQHHNSKEMTW 657
            K   DP+ +++ QD+Q++E  +Y E PLR+++      RNK I  VKV WQHH  +E TW
Sbjct: 1311 KCTPDPTWVVDMQDVQISEDTSYVEEPLRILEVGEHRFRNKVIPXVKVXWQHHGIEEATW 1370

Query: 656  ELESEIRKKYQDL 618
            ELE E+R+ Y  L
Sbjct: 1371 ELEEEMRRHYPQL 1383



 Score =  335 bits (860), Expect(3) = 0.0
 Identities = 168/321 (52%), Positives = 223/321 (69%), Gaps = 5/321 (1%)
 Frame = -2

Query: 2689 FLGIGGYYRRFVENFSRLAVPLTHLTKKGVKFE*TDKCERAFEKLKHRLISAPILTTPEP 2510
            FLG+ GYYRRFVE+FSR+A P+T LT+KGVKF+  ++CE AF++LK +L  AP+LT P  
Sbjct: 699  FLGLVGYYRRFVEDFSRIAAPMTRLTRKGVKFDLNEECENAFQELKRKLTIAPVLTAPIS 758

Query: 2509 RLGYEVYCDASGIGLGGVLMQKGKVIAYASR*LKTYEKNYTTYDLELAAVVFVLKLWRHY 2330
               + +YCDAS +GLG VLMQ+ KV+AYASR LK +E+NY T+DLELA VVF LK WRHY
Sbjct: 759  GELFTIYCDASTVGLGCVLMQQDKVVAYASRQLKQHERNYPTHDLELAVVVFALKTWRHY 818

Query: 2329 LYGENFFVFYDHKSLKYMFIQKDLNMRQIRWFELLKDYEFTLNYHPGKGNVVADALSRKE 2150
            LYGE F V+ DHKSLKY+F QKDLN RQ RW E L+DY+F L+YHPGK NVVADALSRK 
Sbjct: 819  LYGEKFEVYSDHKSLKYIFTQKDLNSRQRRWMETLEDYDFALHYHPGKANVVADALSRKS 878

Query: 2149 YGSIASLRMIE-----DVRNLDLVVDFDDEKAFLYHLAVIPEIVKKVIKAQSTDISLQQV 1985
             G ++SL + E      + + +L +  +     LY ++  P +++++++AQ  D  L++V
Sbjct: 879  VGQLSSLELREFEMHTVIEDFELCLGLEGHGPCLYSISARPXVIQRIVEAQVHDEFLEKV 938

Query: 1984 RGKLSMGEAPVNWSLETNGGIYFKGRLCVPDDEYL*KEILTMAHESVLTLHPGSTKMNYD 1805
            + +L  GE   NWS+  +G + FKGRLCVP D  L  E+L  AH +  T+HPG+TK+   
Sbjct: 939  KTQLVAGEIDENWSMYEDGSVRFKGRLCVPKDVELRNELLADAHRAKYTIHPGNTKI--- 995

Query: 1804 LRCQFWWRGMMKDIALFVSRC 1742
                    GM KDIA FV+ C
Sbjct: 996  --------GMKKDIAQFVANC 1008



 Score =  308 bits (789), Expect(3) = 0.0
 Identities = 161/266 (60%), Positives = 186/266 (69%)
 Frame = -3

Query: 3474 FPDVFPEAFPGLLPKREINFVIDVQSGTAPISLSPYRMAPK*MKDLWKQLDELLELGFIR 3295
            F DVFP+  PGL P RE +F I+V  GT PIS+SPYRMAP  +K+L  QLDELL  GFIR
Sbjct: 472  FEDVFPDELPGLPPHREFDFSIEVYPGTDPISVSPYRMAPLELKELKTQLDELLGKGFIR 531

Query: 3294 PRTSPWRARVLFVLKKDGTMRMCIDYRKLNQVTIKNKYPLPRIDDLFDQLKGAMCFTKID 3115
            P T PW A VLFV KKDGT+R+CIDYRKLN+VT+KNKYPLPRIDDLFDQLKGA  F+KID
Sbjct: 532  PSTXPWGAPVLFVKKKDGTLRLCIDYRKLNRVTVKNKYPLPRIDDLFDQLKGAKYFSKID 591

Query: 3114 LRMGYHQMRIREEDILKTTFGTCYGHYEFLVMPFGLKNAHAAFMDLMNRVFRPYINQFVV 2935
            LR  YHQ+R+REED+ KT F T YGHYEFLVMPFGL NA AAFMDLMNRVFR Y++QFV+
Sbjct: 592  LRTXYHQLRVREEDVSKTAFRTRYGHYEFLVMPFGLTNAPAAFMDLMNRVFRAYLDQFVI 651

Query: 2934 VFIDDVLIYSKSEEEHEKRLQIVLQTLREHKLYAKRSKCEFWISEVLFLGHVISDQGIVV 2755
            VF++D+LIYS+S EEH++ L                                    GI V
Sbjct: 652  VFVBDILIYSRSLEEHKQHLV-----------------------------------GIAV 676

Query: 2754 DPEKIAAVVEWKLQKNVFEV*SFLGL 2677
            D  K+ AV E +   NVFEV SFLGL
Sbjct: 677  DHSKVEAVQEXQRPTNVFEVRSFLGL 702



 Score =  107 bits (268), Expect(3) = 3e-29
 Identities = 93/329 (28%), Positives = 139/329 (42%), Gaps = 33/329 (10%)
 Frame = -3

Query: 4731 KVRFATYMFHGDA*NWWESVQRMEDMSRMSWKNFVKLFSEKYFPPTAKAAKCMEFMFLQQ 4552
            +V  ATYM    A  WWES++R+ D   M+W+ F ++F  KYF   AK AK MEF  L Q
Sbjct: 93   RVGLATYMLVDKADFWWESMKRVYDTEVMTWEEFERIFLGKYFGEVAKHAKRMEFEHLIQ 152

Query: 4551 GDMTVTQLDKKFAELERYETHLVPTQELKARKLESALKAPIRDKVVSHQHVTYKRFLRTA 4372
            G M+V + + +F+EL R+   ++  +  KAR+ +  L+  IR+++V      Y   ++ A
Sbjct: 153  GTMSVLEYESRFSELSRFALGMISEEGEKARRFQQGLRPAIRNRLVPLAIRDYSELVKRA 212

Query: 4371 LAVEAN---WVQILXXXXXXXXXXXXXXXXXXXXXXXXTNYVAKKDNM------------ 4237
            L VE +     QI                         T    ++ +             
Sbjct: 213  LLVEQDIDETNQIREKKRDRKGKQRMGESSQGPQQRQRTQQFERRPSFYAEGGQIAQRAA 272

Query: 4236 TGSEYYNCGQVGHFDRECPLXXXXXXXXXXXXXXXXXVCRPQNHPCTQNIGGRPQNQSRT 4057
                 Y CG   H  R CPL                   RPQ+        G  Q QS  
Sbjct: 273  ANRVCYGCGAGDHLWRACPL-------------RDTQQARPQSQ-------GSSQQQS-- 310

Query: 4056 VTLAFQPRQ---PNVQ---------------GKLNYVA*GNGGEENTVIEGNFLIFSSRA 3931
              ++FQP Q   P  Q               G++  +      E+  +++G  L++S+  
Sbjct: 311  -VVSFQPPQFQLPYYQMPQLPPTTGRGRQAAGRVFALTPTESEEDALLVKGMILVYSTWV 369

Query: 3930 KVLFDTGATYSFISLHLAAYLGLNYDFLE 3844
            +VLFDTGAT+SFIS   A  LGL  + +E
Sbjct: 370  RVLFDTGATHSFISASCANALGLKSERVE 398



 Score = 50.8 bits (120), Expect(3) = 3e-29
 Identities = 25/93 (26%), Positives = 46/93 (49%)
 Frame = -2

Query: 3835 VSSPLGSVVSISKVCKDCDLTPGNHRVAINLIPMRMQECDIIVGMDWMSPNQEILHCSEK 3656
            + SP+G+   + ++CK C +T  N  + ++L  + M   D+I+GMDW++  + ++ C  +
Sbjct: 403  IESPMGTNSRVDRICKGCVITLANRALNVDLRILDMTGYDVILGMDWLAVYRAVIDCHRR 462

Query: 3655 KISFLTMNENRDSVQGERWKINTPSLPSKKRRD 3557
            +I F       D    E      P LP  +  D
Sbjct: 463  RIIFCLPEGFEDVFPDE-----LPGLPPHREFD 490



 Score = 22.3 bits (46), Expect(3) = 3e-29
 Identities = 9/30 (30%), Positives = 16/30 (53%)
 Frame = -2

Query: 4822 FHGTGEPIVAEKWLQNIQKEFKAMLVPEKR 4733
            F+G      AE WL  +++    + +PE+R
Sbjct: 63   FNGEPSAEAAEHWLXRMRRILVGLDIPEER 92


>gb|AAN09852.1| putative polyprotein [Oryza sativa Japonica Group]
          Length = 1715

 Score =  409 bits (1050), Expect(3) = 0.0
 Identities = 196/373 (52%), Positives = 263/373 (70%)
 Frame = -1

Query: 1736 CQQVKAEHQRPAGPLQPLPIAE*KWDSIAMDFVRGLPKGQQGRDSVWVIIDRLTKSAHFL 1557
            CQ+VKAEHQ+PAG LQPL I E KW+ I MDF+ GLP+   G DS+WVI+DRLTK AHF+
Sbjct: 1330 CQRVKAEHQKPAGLLQPLKIPEWKWEEIGMDFITGLPRTSSGHDSIWVIVDRLTKVAHFI 1389

Query: 1556 PVRQADNITTLSNLYIREIVKLHGMPMSIVSDRDPLFTSKFWGRFQLSMGSTLSMSSVFH 1377
            PV+   + + L+ LY+  IV LHG+P  IVSDR   FTS FW + Q  MGS L+ S+ +H
Sbjct: 1390 PVKTTYSGSRLAELYMARIVCLHGVPKKIVSDRGSQFTSNFWKKLQEEMGSKLNFSTAYH 1449

Query: 1376 P*TYGQSERTIQVLEYMLRDCALEFKGNWSEQLPLVEFAYNNIY*SSIRMAPFEALYGRP 1197
            P T GQ+ER  Q+LE MLR CAL+F G+W + LP  EF+YNN Y +S++MAP+EALYGR 
Sbjct: 1450 PQTDGQTERVNQILEDMLRACALDFGGSWDKNLPYAEFSYNNSYQASLQMAPYEALYGRK 1509

Query: 1196 FRTPLCWAEVSDRSVMGPAVVKETTEKIKVIQDRLRTAQSRQKSYAGQRRRPLEFAVGDQ 1017
             RTPL W +  +R V G  +++E  EK+K+IQ+RLR AQSR KSYA  RRR L F  GD 
Sbjct: 1510 CRTPLLWDQTGERQVFGTDILREAEEKVKIIQERLRVAQSRHKSYADNRRRDLSFEEGDY 1569

Query: 1016 VFLKVSPRPGIKRFGKKSKLAPRYIGPFEILQRIGEVAYRLALPTSLADVHNVFHVSMLR 837
            V+L+V+P  G+ RF  K KLAPR++GP++I+ R GEVAY+L LP SLA VHNVFHVS L+
Sbjct: 1570 VYLRVTPLRGVHRFHTKGKLAPRFVGPYKIVSRRGEVAYQLELPQSLAGVHNVFHVSQLK 1629

Query: 836  KYHADPSHIIEWQDIQLNEYVTYEERPLRVVDSK*QVLRNKTIKLVKVIWQHHNSKEMTW 657
            K    P+     + I++ E +TY E+P+R++++  +  RN+ I+  KV W +H+ +E TW
Sbjct: 1630 KCLRVPTEEANIEQIEVQEDLTYVEKPIRILETNERRTRNRVIRFCKVQWSNHSEEESTW 1689

Query: 656  ELESEIRKKYQDL 618
            E E E++  +  L
Sbjct: 1690 EREDELKSAHPHL 1702



 Score =  381 bits (978), Expect(3) = 0.0
 Identities = 227/521 (43%), Positives = 306/521 (58%), Gaps = 6/521 (1%)
 Frame = -3

Query: 4221 YNCGQVGHFDRECPLXXXXXXXXXXXXXXXXXVCRPQNHPCTQNIGGRPQNQSRTVTLAF 4042
            +NCG  GH+  +CP                    +P+            QN S       
Sbjct: 555  FNCGDPGHYADKCP--------------------KPRRVKVVP-----AQNNSAV----- 584

Query: 4041 QPRQPNVQGKLNYVA*GNGGEENTVIEGNFLIFSSRAKVLFDTGATYSFISLHLAAYLGL 3862
                P  + ++N+VA     +   VI G FL+ S  A VLFD+GAT+SF+S+  A   G+
Sbjct: 585  ----PTSKARVNHVAAAEAQDAPDVILGMFLVNSVPATVLFDSGATHSFLSMSFAGNHGM 640

Query: 3861 NYDFLEFNLY---PLHLEVLLVSVRYVRIVI*PLETIEWPSTLYL*ECRNVTLL*A--WI 3697
              + L   L    P +  + L     VRI I   + + + + L L E +++ ++    W+
Sbjct: 641  EVEDLRCPLMVSTPSNQALSLQRSPSVRIEI---QGVPFLANLILLESKDLDVILGMDWL 697

Query: 3696 GCHRTRRYCIVLKRKFLF*Q*MRTVILFKGRGGRLILHHFHLRRDEMRQRNI*HI*RI*R 3517
              H+    C   K            +      GR++  H  L  + +R R          
Sbjct: 698  ARHKGVIDCANRK------------VTLNSYDGRVVTVHA-LSSESLRSR---------- 734

Query: 3516 RRNKVT-KDARIV*EFPDVFPEAFPGLLPKREINFVIDVQSGTAPISLSPYRMAPK*MKD 3340
              N++T ++  IV E+PDVFP+  PG+ PKR+I F ID+  GT PI   PYRMA   + +
Sbjct: 735  -LNQITLEEIPIVREYPDVFPDDLPGMPPKRDIEFRIDLVPGTTPIHKRPYRMAANELAE 793

Query: 3339 LWKQLDELLELGFIRPRTSPWRARVLFVLKKDGTMRMCIDYRKLNQVTIKNKYPLPRIDD 3160
            + +Q+D+LL+ G+IRP +SPW A V+FV KKD T RMC+DYR LN VTIKNKYPLPRIDD
Sbjct: 794  VKRQVDDLLQKGYIRPSSSPWGAPVIFVEKKDHTQRMCVDYRALNDVTIKNKYPLPRIDD 853

Query: 3159 LFDQLKGAMCFTKIDLRMGYHQMRIREEDILKTTFGTCYGHYEFLVMPFGLKNAHAAFMD 2980
            LFDQLKGA  F+KIDLR GYHQ+RI+EEDI KT F T YG +E  VM FGL NA A FM+
Sbjct: 854  LFDQLKGATVFSKIDLRSGYHQLRIKEEDIPKTAFTTRYGLFECTVMSFGLTNAPAFFMN 913

Query: 2979 LMNRVFRPYINQFVVVFIDDVLIYSKSEEEHEKRLQIVLQTLREHKLYAKRSKCEFWISE 2800
            LMN+VF  Y+++FVVVFIDD+LIYS+++EEHE+ L++ L+ LREH+LYAK SKCEFW+SE
Sbjct: 914  LMNKVFMEYLDKFVVVFIDDILIYSRTKEEHEEHLRLALEKLREHQLYAKFSKCEFWLSE 973

Query: 2799 VLFLGHVISDQGIVVDPEKIAAVVEWKLQKNVFEV*SFLGL 2677
            V FLGH+IS  G+ VDP  + +V  WK  K V E+ SFLGL
Sbjct: 974  VKFLGHIISAGGVAVDPSNVESVTNWKQPKTVSEIRSFLGL 1014



 Score =  322 bits (826), Expect(3) = 0.0
 Identities = 159/321 (49%), Positives = 229/321 (71%), Gaps = 5/321 (1%)
 Frame = -2

Query: 2689 FLGIGGYYRRFVENFSRLAVPLTHLTKKGVKFE*TDKCERAFEKLKHRLISAPILTTPEP 2510
            FLG+ GYYRRF+ENFS++A P+T L +K VK++ +++CE++F++LK RLISAPIL  P+P
Sbjct: 1011 FLGLAGYYRRFIENFSKIAKPMTRLLQKDVKYKWSEECEQSFQELKSRLISAPILILPDP 1070

Query: 2509 RLGYEVYCDASGIGLGGVLMQKGKVIAYASR*LKTYEKNYTTYDLELAAVVFVLKLWRHY 2330
            + G++VYCDAS +GLG VLMQ GKV+AYASR L+ +EKNY T+D+ELAAVV  LK+WRHY
Sbjct: 1071 KKGFQVYCDASKLGLGCVLMQDGKVVAYASRQLRPHEKNYPTHDIELAAVVHALKIWRHY 1130

Query: 2329 LYGENFFVFYDHKSLKYMFIQKDLNMRQIRWFELLKDYEFTLNYHPGKGNVVADALSRKE 2150
            L+G    V+ DHKSLKY+F Q DLNMRQ RW EL+KDY+  ++YHPGK NVVADALSRK 
Sbjct: 1131 LFGTRTEVYTDHKSLKYIFTQSDLNMRQRRWLELIKDYDMGIHYHPGKANVVADALSRKG 1190

Query: 2149 Y-----GSIASLRMIEDVRNLDLVVDFDDEKAFLYHLAVIPEIVKKVIKAQSTDISLQQV 1985
            Y     G    L + ++   L+L +     + F+  L   P ++ +V +AQ  D  +Q++
Sbjct: 1191 YCNATEGRQLPLELCKEFERLNLGI---VGRGFVAALEAKPTLIDQVREAQINDPDIQEI 1247

Query: 1984 RGKLSMGEAPVNWSLETNGGIYFKGRLCVPDDEYL*KEILTMAHESVLTLHPGSTKMNYD 1805
            +  +  G+A + +  + +G ++   R+CVPD++ L   IL  AH+++ ++HPGSTKM  D
Sbjct: 1248 KKNMRRGKA-IGFLEDEHGTVWLGERICVPDNKDLKDAILKEAHDTLYSIHPGSTKMYQD 1306

Query: 1804 LRCQFWWRGMMKDIALFVSRC 1742
            L+ +FWW  M ++IA +V+ C
Sbjct: 1307 LKERFWWASMKREIAEYVAVC 1327


>gb|ABG65971.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
            Japonica Group]
          Length = 1475

 Score =  409 bits (1050), Expect(3) = 0.0
 Identities = 196/373 (52%), Positives = 263/373 (70%)
 Frame = -1

Query: 1736 CQQVKAEHQRPAGPLQPLPIAE*KWDSIAMDFVRGLPKGQQGRDSVWVIIDRLTKSAHFL 1557
            CQ+VKAEHQ+PAG LQPL I E KW+ I MDF+ GLP+   G DS+WVI+DRLTK AHF+
Sbjct: 1090 CQRVKAEHQKPAGLLQPLKIPEWKWEEIGMDFITGLPRTSSGHDSIWVIVDRLTKVAHFI 1149

Query: 1556 PVRQADNITTLSNLYIREIVKLHGMPMSIVSDRDPLFTSKFWGRFQLSMGSTLSMSSVFH 1377
            PV+   + + L+ LY+  IV LHG+P  IVSDR   FTS FW + Q  MGS L+ S+ +H
Sbjct: 1150 PVKTTYSGSRLAELYMARIVCLHGVPKKIVSDRGSQFTSNFWKKLQEEMGSKLNFSTAYH 1209

Query: 1376 P*TYGQSERTIQVLEYMLRDCALEFKGNWSEQLPLVEFAYNNIY*SSIRMAPFEALYGRP 1197
            P T GQ+ER  Q+LE MLR CAL+F G+W + LP  EF+YNN Y +S++MAP+EALYGR 
Sbjct: 1210 PQTDGQTERVNQILEDMLRACALDFGGSWDKNLPYAEFSYNNSYQASLQMAPYEALYGRK 1269

Query: 1196 FRTPLCWAEVSDRSVMGPAVVKETTEKIKVIQDRLRTAQSRQKSYAGQRRRPLEFAVGDQ 1017
             RTPL W +  +R V G  +++E  EK+K+IQ+RLR AQSR KSYA  RRR L F  GD 
Sbjct: 1270 CRTPLLWDQTGERQVFGTDILREAEEKVKIIQERLRVAQSRHKSYADNRRRDLSFEEGDY 1329

Query: 1016 VFLKVSPRPGIKRFGKKSKLAPRYIGPFEILQRIGEVAYRLALPTSLADVHNVFHVSMLR 837
            V+L+V+P  G+ RF  K KLAPR++GP++I+ R GEVAY+L LP SLA VHNVFHVS L+
Sbjct: 1330 VYLRVTPLRGVHRFHTKGKLAPRFVGPYKIVSRRGEVAYQLELPQSLAGVHNVFHVSQLK 1389

Query: 836  KYHADPSHIIEWQDIQLNEYVTYEERPLRVVDSK*QVLRNKTIKLVKVIWQHHNSKEMTW 657
            K    P+     + I++ E +TY E+P+R++++  +  RN+ I+  KV W +H+ +E TW
Sbjct: 1390 KCLRVPTEEANIEQIEVQEDLTYVEKPIRILETNERRTRNRVIRFCKVQWSNHSEEESTW 1449

Query: 656  ELESEIRKKYQDL 618
            E E E++  +  L
Sbjct: 1450 EREDELKSAHPHL 1462



 Score =  381 bits (978), Expect(3) = 0.0
 Identities = 227/521 (43%), Positives = 306/521 (58%), Gaps = 6/521 (1%)
 Frame = -3

Query: 4221 YNCGQVGHFDRECPLXXXXXXXXXXXXXXXXXVCRPQNHPCTQNIGGRPQNQSRTVTLAF 4042
            +NCG  GH+  +CP                    +P+            QN S       
Sbjct: 315  FNCGDPGHYADKCP--------------------KPRRVKVVP-----AQNNSAV----- 344

Query: 4041 QPRQPNVQGKLNYVA*GNGGEENTVIEGNFLIFSSRAKVLFDTGATYSFISLHLAAYLGL 3862
                P  + ++N+VA     +   VI G FL+ S  A VLFD+GAT+SF+S+  A   G+
Sbjct: 345  ----PTSKARVNHVAAAEAQDAPDVILGMFLVNSVPATVLFDSGATHSFLSMSFAGNHGM 400

Query: 3861 NYDFLEFNLY---PLHLEVLLVSVRYVRIVI*PLETIEWPSTLYL*ECRNVTLL*A--WI 3697
              + L   L    P +  + L     VRI I   + + + + L L E +++ ++    W+
Sbjct: 401  EVEDLRCPLMVSTPSNQALSLQRSPSVRIEI---QGVPFLANLILLESKDLDVILGMDWL 457

Query: 3696 GCHRTRRYCIVLKRKFLF*Q*MRTVILFKGRGGRLILHHFHLRRDEMRQRNI*HI*RI*R 3517
              H+    C   K            +      GR++  H  L  + +R R          
Sbjct: 458  ARHKGVIDCANRK------------VTLNSYDGRVVTVHA-LSSESLRSR---------- 494

Query: 3516 RRNKVT-KDARIV*EFPDVFPEAFPGLLPKREINFVIDVQSGTAPISLSPYRMAPK*MKD 3340
              N++T ++  IV E+PDVFP+  PG+ PKR+I F ID+  GT PI   PYRMA   + +
Sbjct: 495  -LNQITLEEIPIVREYPDVFPDDLPGMPPKRDIEFRIDLVPGTTPIHKRPYRMAANELAE 553

Query: 3339 LWKQLDELLELGFIRPRTSPWRARVLFVLKKDGTMRMCIDYRKLNQVTIKNKYPLPRIDD 3160
            + +Q+D+LL+ G+IRP +SPW A V+FV KKD T RMC+DYR LN VTIKNKYPLPRIDD
Sbjct: 554  VKRQVDDLLQKGYIRPSSSPWGAPVIFVEKKDHTQRMCVDYRALNDVTIKNKYPLPRIDD 613

Query: 3159 LFDQLKGAMCFTKIDLRMGYHQMRIREEDILKTTFGTCYGHYEFLVMPFGLKNAHAAFMD 2980
            LFDQLKGA  F+KIDLR GYHQ+RI+EEDI KT F T YG +E  VM FGL NA A FM+
Sbjct: 614  LFDQLKGATVFSKIDLRSGYHQLRIKEEDIPKTAFTTRYGLFECTVMSFGLTNAPAFFMN 673

Query: 2979 LMNRVFRPYINQFVVVFIDDVLIYSKSEEEHEKRLQIVLQTLREHKLYAKRSKCEFWISE 2800
            LMN+VF  Y+++FVVVFIDD+LIYS+++EEHE+ L++ L+ LREH+LYAK SKCEFW+SE
Sbjct: 674  LMNKVFMEYLDKFVVVFIDDILIYSRTKEEHEEHLRLALEKLREHQLYAKFSKCEFWLSE 733

Query: 2799 VLFLGHVISDQGIVVDPEKIAAVVEWKLQKNVFEV*SFLGL 2677
            V FLGH+IS  G+ VDP  + +V  WK  K V E+ SFLGL
Sbjct: 734  VKFLGHIISAGGVAVDPSNVESVTNWKQPKTVSEIRSFLGL 774



 Score =  322 bits (826), Expect(3) = 0.0
 Identities = 159/321 (49%), Positives = 229/321 (71%), Gaps = 5/321 (1%)
 Frame = -2

Query: 2689 FLGIGGYYRRFVENFSRLAVPLTHLTKKGVKFE*TDKCERAFEKLKHRLISAPILTTPEP 2510
            FLG+ GYYRRF+ENFS++A P+T L +K VK++ +++CE++F++LK RLISAPIL  P+P
Sbjct: 771  FLGLAGYYRRFIENFSKIAKPMTRLLQKDVKYKWSEECEQSFQELKSRLISAPILILPDP 830

Query: 2509 RLGYEVYCDASGIGLGGVLMQKGKVIAYASR*LKTYEKNYTTYDLELAAVVFVLKLWRHY 2330
            + G++VYCDAS +GLG VLMQ GKV+AYASR L+ +EKNY T+D+ELAAVV  LK+WRHY
Sbjct: 831  KKGFQVYCDASKLGLGCVLMQDGKVVAYASRQLRPHEKNYPTHDIELAAVVHALKIWRHY 890

Query: 2329 LYGENFFVFYDHKSLKYMFIQKDLNMRQIRWFELLKDYEFTLNYHPGKGNVVADALSRKE 2150
            L+G    V+ DHKSLKY+F Q DLNMRQ RW EL+KDY+  ++YHPGK NVVADALSRK 
Sbjct: 891  LFGTRTEVYTDHKSLKYIFTQSDLNMRQRRWLELIKDYDMGIHYHPGKANVVADALSRKG 950

Query: 2149 Y-----GSIASLRMIEDVRNLDLVVDFDDEKAFLYHLAVIPEIVKKVIKAQSTDISLQQV 1985
            Y     G    L + ++   L+L +     + F+  L   P ++ +V +AQ  D  +Q++
Sbjct: 951  YCNATEGRQLPLELCKEFERLNLGI---VGRGFVAALEAKPTLIDQVREAQINDPDIQEI 1007

Query: 1984 RGKLSMGEAPVNWSLETNGGIYFKGRLCVPDDEYL*KEILTMAHESVLTLHPGSTKMNYD 1805
            +  +  G+A + +  + +G ++   R+CVPD++ L   IL  AH+++ ++HPGSTKM  D
Sbjct: 1008 KKNMRRGKA-IGFLEDEHGTVWLGERICVPDNKDLKDAILKEAHDTLYSIHPGSTKMYQD 1066

Query: 1804 LRCQFWWRGMMKDIALFVSRC 1742
            L+ +FWW  M ++IA +V+ C
Sbjct: 1067 LKERFWWASMKREIAEYVAVC 1087


>gb|ABA98266.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
            Japonica Group]
          Length = 1473

 Score =  408 bits (1049), Expect(3) = 0.0
 Identities = 196/373 (52%), Positives = 263/373 (70%)
 Frame = -1

Query: 1736 CQQVKAEHQRPAGPLQPLPIAE*KWDSIAMDFVRGLPKGQQGRDSVWVIIDRLTKSAHFL 1557
            CQ+VKAEHQ+PAG LQPL I E KW+ I MDF+ GLP+   G DS+WVI+DRLTK AHF+
Sbjct: 1088 CQRVKAEHQKPAGLLQPLKIPEWKWEEIGMDFITGLPRTSSGHDSIWVIVDRLTKVAHFI 1147

Query: 1556 PVRQADNITTLSNLYIREIVKLHGMPMSIVSDRDPLFTSKFWGRFQLSMGSTLSMSSVFH 1377
            PV+   + + L+ LY+  IV LHG+P  IVSDR   FTS FW + Q  MGS L+ S+ +H
Sbjct: 1148 PVKTTYSGSRLAELYMARIVCLHGVPKKIVSDRGSQFTSNFWKKLQEEMGSKLNFSTAYH 1207

Query: 1376 P*TYGQSERTIQVLEYMLRDCALEFKGNWSEQLPLVEFAYNNIY*SSIRMAPFEALYGRP 1197
            P T GQ+ER  Q+LE MLR CAL+F G+W + LP  EF+YNN Y +S++MAP+EALYGR 
Sbjct: 1208 PQTDGQTERVNQILEDMLRACALDFGGSWDKNLPYAEFSYNNSYQASLQMAPYEALYGRK 1267

Query: 1196 FRTPLCWAEVSDRSVMGPAVVKETTEKIKVIQDRLRTAQSRQKSYAGQRRRPLEFAVGDQ 1017
             RTPL W +  +R V G  +++E  EK+K+IQ+RLR AQSR KSYA  RRR L F  GD 
Sbjct: 1268 CRTPLLWDQTGERQVFGTDILREAEEKVKIIQERLRVAQSRHKSYADNRRRDLSFEEGDY 1327

Query: 1016 VFLKVSPRPGIKRFGKKSKLAPRYIGPFEILQRIGEVAYRLALPTSLADVHNVFHVSMLR 837
            V+L+V+P  G+ RF  K KLAPR++GP++I+ R GEVAY+L LP SLA VHNVFHVS L+
Sbjct: 1328 VYLRVTPFRGVHRFRTKGKLAPRFVGPYKIVSRRGEVAYQLELPQSLAGVHNVFHVSQLK 1387

Query: 836  KYHADPSHIIEWQDIQLNEYVTYEERPLRVVDSK*QVLRNKTIKLVKVIWQHHNSKEMTW 657
            K    P+     + I++ E +TY E+P+R++++  +  RN+ I+  KV W +H+ +E TW
Sbjct: 1388 KCLRVPTEEANIEQIEVQEDLTYVEKPIRILETSERRTRNRVIRFCKVQWSNHSEEESTW 1447

Query: 656  ELESEIRKKYQDL 618
            E E E++  +  L
Sbjct: 1448 EREDELKSAHPHL 1460



 Score =  380 bits (976), Expect(3) = 0.0
 Identities = 227/521 (43%), Positives = 305/521 (58%), Gaps = 6/521 (1%)
 Frame = -3

Query: 4221 YNCGQVGHFDRECPLXXXXXXXXXXXXXXXXXVCRPQNHPCTQNIGGRPQNQSRTVTLAF 4042
            +NCG  GH+  +CP                           TQN    P +++R      
Sbjct: 313  FNCGDPGHYADKCPKPRRVKVVP------------------TQNNSAVPASKAR------ 348

Query: 4041 QPRQPNVQGKLNYVA*GNGGEENTVIEGNFLIFSSRAKVLFDTGATYSFISLHLAAYLGL 3862
                      +N+VA     +   VI G FL+ S  A VLFD+GAT+SF+S+  A   G+
Sbjct: 349  ----------VNHVAAAEAQDAPDVILGTFLVNSVPATVLFDSGATHSFLSMSFAGNHGM 398

Query: 3861 NYDFLEFNLY---PLHLEVLLVSVRYVRIVI*PLETIEWPSTLYL*ECRNVTLL*A--WI 3697
              + L   L    P +  + L     VRI I   + + + + L L + +++ ++    W+
Sbjct: 399  EVEDLRRPLMVSTPSNQALSLQRSPSVRIEI---QGVPFLANLILLKSKDLDVILGMDWL 455

Query: 3696 GCHRTRRYCIVLKRKFLF*Q*MRTVILFKGRGGRLILHHFHLRRDEMRQRNI*HI*RI*R 3517
              H+    C   K            +      GR++  H  L  + +R R          
Sbjct: 456  ARHKGVIDCANKK------------VTLNSYDGRVVTVHA-LSSESLRSR---------- 492

Query: 3516 RRNKVT-KDARIV*EFPDVFPEAFPGLLPKREINFVIDVQSGTAPISLSPYRMAPK*MKD 3340
              N++T ++  IV E+PDVFP+  PG+ PKR+I F ID+  GT PI   PYRMA   + +
Sbjct: 493  -LNQITLEEIPIVREYPDVFPDDLPGMPPKRDIEFRIDLVPGTTPIHKRPYRMAANELAE 551

Query: 3339 LWKQLDELLELGFIRPRTSPWRARVLFVLKKDGTMRMCIDYRKLNQVTIKNKYPLPRIDD 3160
            + +Q+D+LL+ G+IRP +SPW A V+FV KKD T RMC+DYR LN VTIKNKYPLPRIDD
Sbjct: 552  VKRQVDDLLQKGYIRPSSSPWGAPVIFVEKKDHTQRMCVDYRALNDVTIKNKYPLPRIDD 611

Query: 3159 LFDQLKGAMCFTKIDLRMGYHQMRIREEDILKTTFGTCYGHYEFLVMPFGLKNAHAAFMD 2980
            LFDQLKGA  F+KIDLR GYHQ+RI+EEDI KT F T YG +E  VM FGL NA A FM+
Sbjct: 612  LFDQLKGATVFSKIDLRSGYHQLRIKEEDIPKTAFTTRYGLFECTVMSFGLTNAPAFFMN 671

Query: 2979 LMNRVFRPYINQFVVVFIDDVLIYSKSEEEHEKRLQIVLQTLREHKLYAKRSKCEFWISE 2800
            LMN+VF  Y+++FVVVFIDD+LIYS+++EEHE+ L++ L+ LREH+LYAK SKCEFW+SE
Sbjct: 672  LMNKVFMEYLDKFVVVFIDDILIYSRTKEEHEEHLRLALEKLREHQLYAKFSKCEFWLSE 731

Query: 2799 VLFLGHVISDQGIVVDPEKIAAVVEWKLQKNVFEV*SFLGL 2677
            V FLGHVIS  G+ VDP  + +V  WK  K V E+ SFLGL
Sbjct: 732  VKFLGHVISAGGVAVDPSNVESVTNWKQPKTVSEIRSFLGL 772



 Score =  323 bits (828), Expect(3) = 0.0
 Identities = 160/321 (49%), Positives = 229/321 (71%), Gaps = 5/321 (1%)
 Frame = -2

Query: 2689 FLGIGGYYRRFVENFSRLAVPLTHLTKKGVKFE*TDKCERAFEKLKHRLISAPILTTPEP 2510
            FLG+ GYYRRF+ENFS++A P+T L +K VK++ +++CER+F++LK RLISAPIL  P+P
Sbjct: 769  FLGLAGYYRRFIENFSKIAKPMTRLLQKDVKYKWSEECERSFQELKSRLISAPILILPDP 828

Query: 2509 RLGYEVYCDASGIGLGGVLMQKGKVIAYASR*LKTYEKNYTTYDLELAAVVFVLKLWRHY 2330
            + G++VYCDAS +GLG VLMQ GKV+AYASR L+ +EKNY T+D+ELAAVV  LK+WRHY
Sbjct: 829  KKGFQVYCDASKLGLGCVLMQDGKVVAYASRQLRPHEKNYPTHDIELAAVVHALKIWRHY 888

Query: 2329 LYGENFFVFYDHKSLKYMFIQKDLNMRQIRWFELLKDYEFTLNYHPGKGNVVADALSRKE 2150
            L+G    V+ DHKSLKY+F Q DLNMRQ RW EL+KDY+  ++YHPGK NVVADALSRK 
Sbjct: 889  LFGTRTEVYTDHKSLKYIFTQPDLNMRQRRWLELIKDYDMGIHYHPGKANVVADALSRKG 948

Query: 2149 Y-----GSIASLRMIEDVRNLDLVVDFDDEKAFLYHLAVIPEIVKKVIKAQSTDISLQQV 1985
            Y     G    L + ++   L+L +     + F+  L   P ++ +V +AQ  D  +Q++
Sbjct: 949  YCNATEGRQLPLELCKEFERLNLGI---VGRGFVAALEAKPTLIDQVREAQINDPDIQKI 1005

Query: 1984 RGKLSMGEAPVNWSLETNGGIYFKGRLCVPDDEYL*KEILTMAHESVLTLHPGSTKMNYD 1805
            +  +  G+A + +  + +G ++   R+CVPD++ L   IL  AH+++ ++HPGSTKM  D
Sbjct: 1006 KKNMRRGKA-IGFLEDEHGTVWLGERICVPDNKDLKDAILKEAHDTLYSIHPGSTKMYQD 1064

Query: 1804 LRCQFWWRGMMKDIALFVSRC 1742
            L+ +FWW  M ++IA +V+ C
Sbjct: 1065 LKERFWWASMKREIAEYVAVC 1085


>gb|AAM93458.1| putative polyprotein [Oryza sativa Japonica Group]
            gi|31430677|gb|AAP52558.1| retrotransposon protein,
            putative, Ty3-gypsy subclass [Oryza sativa Japonica
            Group]
          Length = 1406

 Score =  407 bits (1045), Expect(3) = 0.0
 Identities = 195/370 (52%), Positives = 261/370 (70%)
 Frame = -1

Query: 1736 CQQVKAEHQRPAGPLQPLPIAE*KWDSIAMDFVRGLPKGQQGRDSVWVIIDRLTKSAHFL 1557
            CQ+VKAEHQ+PAG LQPL I E KW+ I MDF+ GLP+   G DS+WVI+DRLTK AHF+
Sbjct: 1021 CQRVKAEHQKPAGLLQPLKIPEWKWEEIGMDFITGLPRTSSGHDSIWVIVDRLTKVAHFI 1080

Query: 1556 PVRQADNITTLSNLYIREIVKLHGMPMSIVSDRDPLFTSKFWGRFQLSMGSTLSMSSVFH 1377
            PV+   + + L+ LY+  IV LHG+P  IVSDR   FTS FW + Q  MGS L+ S+ +H
Sbjct: 1081 PVKTTYSGSRLAELYMARIVCLHGVPKKIVSDRGSQFTSNFWEKLQEEMGSKLNFSTAYH 1140

Query: 1376 P*TYGQSERTIQVLEYMLRDCALEFKGNWSEQLPLVEFAYNNIY*SSIRMAPFEALYGRP 1197
            P T GQ+ER  Q+LE MLR CAL+F G+W + LP  EF+YNN Y +S++MAP+EALYGR 
Sbjct: 1141 PQTDGQTERVNQILEDMLRACALDFGGSWDKNLPYAEFSYNNSYQASLQMAPYEALYGRK 1200

Query: 1196 FRTPLCWAEVSDRSVMGPAVVKETTEKIKVIQDRLRTAQSRQKSYAGQRRRPLEFAVGDQ 1017
             RTPL W +  +R V G  +++E  EK+K+IQ+RLR AQSR KSYA  RRR L F  GD 
Sbjct: 1201 CRTPLLWDQTGERQVFGTDILREAEEKVKIIQERLRVAQSRYKSYADNRRRDLSFEEGDY 1260

Query: 1016 VFLKVSPRPGIKRFGKKSKLAPRYIGPFEILQRIGEVAYRLALPTSLADVHNVFHVSMLR 837
            V+L+V+P  G+ RF  K KLAPR++GP++I+ R GEVAY+L LP SLA VHNVFHVS L+
Sbjct: 1261 VYLRVTPLRGVHRFQTKGKLAPRFVGPYKIVSRRGEVAYQLELPQSLAGVHNVFHVSQLK 1320

Query: 836  KYHADPSHIIEWQDIQLNEYVTYEERPLRVVDSK*QVLRNKTIKLVKVIWQHHNSKEMTW 657
            K    P+       I++ E +TY E+P+R++++  +  RN+ I+  KV W +H+ +E TW
Sbjct: 1321 KCLRVPTEEANIDQIEVQEDLTYVEKPIRILETNERRTRNRVIRFCKVQWSNHSEEESTW 1380

Query: 656  ELESEIRKKY 627
            E E E++  +
Sbjct: 1381 EREDELKSAH 1390



 Score =  380 bits (977), Expect(3) = 0.0
 Identities = 226/521 (43%), Positives = 306/521 (58%), Gaps = 6/521 (1%)
 Frame = -3

Query: 4221 YNCGQVGHFDRECPLXXXXXXXXXXXXXXXXXVCRPQNHPCTQNIGGRPQNQSRTVTLAF 4042
            +NCG  GH+  +CP                                 +P+ + + V    
Sbjct: 246  FNCGDPGHYADKCP---------------------------------KPR-RVKVVPAQS 271

Query: 4041 QPRQPNVQGKLNYVA*GNGGEENTVIEGNFLIFSSRAKVLFDTGATYSFISLHLAAYLGL 3862
                P  + ++N+VA     +   VI G FL+ S  A VLFD+GAT+SF+S+  A   G+
Sbjct: 272  NSAVPASKARVNHVAAAEAQDAPDVILGTFLVNSVPATVLFDSGATHSFLSMSFAGNHGM 331

Query: 3861 NYDFLEFNLY---PLHLEVLLVSVRYVRIVI*PLETIEWPSTLYL*ECRNVTLL*A--WI 3697
              + L   L    P +  + L     VRI I   + + + + L L E +++ ++    W+
Sbjct: 332  EVEDLRRPLMVSTPSNQALSLQRSPSVRIEI---QGVPFLANLILLESKDLDVILGMDWL 388

Query: 3696 GCHRTRRYCIVLKRKFLF*Q*MRTVILFKGRGGRLILHHFHLRRDEMRQRNI*HI*RI*R 3517
              H+    C   K            +      GR++  H  L  + +R R          
Sbjct: 389  ARHKGVIDCANRK------------VTLNSYDGRVVTVHA-LSSESLRSR---------- 425

Query: 3516 RRNKVT-KDARIV*EFPDVFPEAFPGLLPKREINFVIDVQSGTAPISLSPYRMAPK*MKD 3340
              N++T ++  IV E+PDVFP+  PG+ PKR+I F ID+  GT PI   PYRMA   + +
Sbjct: 426  -LNQITLEEIPIVREYPDVFPDDLPGMPPKRDIEFRIDLVPGTTPIHKRPYRMAANELAE 484

Query: 3339 LWKQLDELLELGFIRPRTSPWRARVLFVLKKDGTMRMCIDYRKLNQVTIKNKYPLPRIDD 3160
            + +Q+D+LL+ G+IRP +SPW A V+FV KKD T RMC+DYR LN VTIKNKYPLPRIDD
Sbjct: 485  VKRQVDDLLQKGYIRPSSSPWGAPVIFVEKKDHTQRMCVDYRALNDVTIKNKYPLPRIDD 544

Query: 3159 LFDQLKGAMCFTKIDLRMGYHQMRIREEDILKTTFGTCYGHYEFLVMPFGLKNAHAAFMD 2980
            LFDQLKGA  F+KIDLR GYHQ+RI+EEDI KT F T YG +E  VM FGL NA A FM+
Sbjct: 545  LFDQLKGATVFSKIDLRSGYHQLRIKEEDIPKTAFTTRYGLFECTVMSFGLTNAPAFFMN 604

Query: 2979 LMNRVFRPYINQFVVVFIDDVLIYSKSEEEHEKRLQIVLQTLREHKLYAKRSKCEFWISE 2800
            LMN+VF  Y+++FVVVFIDD+LIYS+++EEHE+ L++ L+ LREH+LYAK SKCEFW+SE
Sbjct: 605  LMNKVFMEYLDKFVVVFIDDILIYSQTKEEHEEHLRLALEKLREHQLYAKFSKCEFWLSE 664

Query: 2799 VLFLGHVISDQGIVVDPEKIAAVVEWKLQKNVFEV*SFLGL 2677
            V FLGHVIS  G+ VDP  + +V  WK  K V E+ SFLGL
Sbjct: 665  VKFLGHVISAGGVAVDPSNVESVTNWKQPKTVSEIRSFLGL 705



 Score =  323 bits (829), Expect(3) = 0.0
 Identities = 160/321 (49%), Positives = 229/321 (71%), Gaps = 5/321 (1%)
 Frame = -2

Query: 2689 FLGIGGYYRRFVENFSRLAVPLTHLTKKGVKFE*TDKCERAFEKLKHRLISAPILTTPEP 2510
            FLG+ GYYRRF+ENFS++A P+T L +K VK++ +++CER+F++LK RLISAPIL  P+P
Sbjct: 702  FLGLAGYYRRFIENFSKIAKPMTRLLQKDVKYKWSEECERSFQELKSRLISAPILILPDP 761

Query: 2509 RLGYEVYCDASGIGLGGVLMQKGKVIAYASR*LKTYEKNYTTYDLELAAVVFVLKLWRHY 2330
            + G++VYCDAS +GLG VLMQ GKV+AYASR L+ +EKNY T+D+ELAAVV  LK+WRHY
Sbjct: 762  KKGFQVYCDASKLGLGCVLMQDGKVVAYASRQLRPHEKNYPTHDIELAAVVHALKIWRHY 821

Query: 2329 LYGENFFVFYDHKSLKYMFIQKDLNMRQIRWFELLKDYEFTLNYHPGKGNVVADALSRKE 2150
            L+G    V+ DHKSLKY+F Q DLNMRQ RW EL+KDY+  ++YHPGK NVVADALSRK 
Sbjct: 822  LFGTRTEVYTDHKSLKYIFTQPDLNMRQRRWLELIKDYDMGIHYHPGKANVVADALSRKG 881

Query: 2149 Y-----GSIASLRMIEDVRNLDLVVDFDDEKAFLYHLAVIPEIVKKVIKAQSTDISLQQV 1985
            Y     G    L + ++   L+L +     + F+  L   P ++ +V +AQ  D  +Q++
Sbjct: 882  YCNATEGRQLPLELCKEFERLNLGI---VGRGFVAALEAKPTLIDQVREAQINDPDIQEI 938

Query: 1984 RGKLSMGEAPVNWSLETNGGIYFKGRLCVPDDEYL*KEILTMAHESVLTLHPGSTKMNYD 1805
            +  +  G+A + +  + +G ++   R+CVPD++ L   IL  AH+++ ++HPGSTKM  D
Sbjct: 939  KKNMRRGKA-IGFLEDEHGTVWLGERICVPDNKDLKDAILKEAHDTLYSIHPGSTKMYQD 997

Query: 1804 LRCQFWWRGMMKDIALFVSRC 1742
            L+ +FWW  M ++IA +V+ C
Sbjct: 998  LKERFWWASMKREIAEYVAVC 1018


>gb|AAS98511.1| putative polyprotein [Oryza sativa Japonica Group]
          Length = 1678

 Score =  407 bits (1046), Expect(3) = 0.0
 Identities = 195/370 (52%), Positives = 261/370 (70%)
 Frame = -1

Query: 1736 CQQVKAEHQRPAGPLQPLPIAE*KWDSIAMDFVRGLPKGQQGRDSVWVIIDRLTKSAHFL 1557
            CQ+VKAEHQ+PAG LQPL I E KW+ I MDF+ GLP+   G DS+WVI+DRLTK AHF+
Sbjct: 1293 CQRVKAEHQKPAGLLQPLKIPEWKWEEIGMDFITGLPRTSSGHDSIWVIVDRLTKVAHFI 1352

Query: 1556 PVRQADNITTLSNLYIREIVKLHGMPMSIVSDRDPLFTSKFWGRFQLSMGSTLSMSSVFH 1377
            PV+   + + L+ LY+  IV LHG+P  IVSDR   FTS FW + Q  MGS L+ S+ +H
Sbjct: 1353 PVKTTYSGSRLAELYMARIVCLHGVPKKIVSDRGSQFTSNFWKKLQEEMGSKLNFSTAYH 1412

Query: 1376 P*TYGQSERTIQVLEYMLRDCALEFKGNWSEQLPLVEFAYNNIY*SSIRMAPFEALYGRP 1197
            P T GQ+ER  Q+LE MLR CAL+F G+W + LP  EF YNN Y +S++MAP+EALYGR 
Sbjct: 1413 PQTDGQTERVNQILEDMLRACALDFGGSWDKNLPYAEFLYNNSYQASLQMAPYEALYGRK 1472

Query: 1196 FRTPLCWAEVSDRSVMGPAVVKETTEKIKVIQDRLRTAQSRQKSYAGQRRRPLEFAVGDQ 1017
             RTPL W +  +R V G  +++E  EK+K+IQ+RLR AQSR KSYA  RRR L F  GD 
Sbjct: 1473 CRTPLLWDQTGERQVFGTDILREAEEKVKIIQERLRVAQSRHKSYADNRRRDLSFEEGDY 1532

Query: 1016 VFLKVSPRPGIKRFGKKSKLAPRYIGPFEILQRIGEVAYRLALPTSLADVHNVFHVSMLR 837
            V+L+V+P  G+ RF  K KLAPR++GP++I+ R GEVAY+L LP SLA VHNVFHVS L+
Sbjct: 1533 VYLRVTPLRGVHRFHTKGKLAPRFVGPYKIVSRRGEVAYQLELPQSLAGVHNVFHVSQLK 1592

Query: 836  KYHADPSHIIEWQDIQLNEYVTYEERPLRVVDSK*QVLRNKTIKLVKVIWQHHNSKEMTW 657
            K    P+     + I++ E +TY E+P+R++++  +  RN+ I+  KV W +H+ +E TW
Sbjct: 1593 KCLRVPTEEANIEQIEVQEDLTYVEKPIRILETSERRTRNRVIRFCKVQWSNHSEEESTW 1652

Query: 656  ELESEIRKKY 627
            E E E++  +
Sbjct: 1653 EREDELKSAH 1662



 Score =  379 bits (973), Expect(3) = 0.0
 Identities = 226/521 (43%), Positives = 308/521 (59%), Gaps = 6/521 (1%)
 Frame = -3

Query: 4221 YNCGQVGHFDRECPLXXXXXXXXXXXXXXXXXVCRPQNHPCTQNIGGRPQNQSRTVTLAF 4042
            +NCG  GH+  +CP                    +P+           P   + TV+ + 
Sbjct: 518  FNCGDPGHYADKCP--------------------KPRRVKVV------PAQSNSTVSAS- 550

Query: 4041 QPRQPNVQGKLNYVA*GNGGEENTVIEGNFLIFSSRAKVLFDTGATYSFISLHLAAYLGL 3862
                   + ++N+VA     +   VI G FL+ S  A VLFD+GAT+SF+S+  A   G+
Sbjct: 551  -------KARVNHVAAAEAQDAPDVILGTFLVNSVPATVLFDSGATHSFLSMSFAGNHGM 603

Query: 3861 NYDFLEFNLY---PLHLEVLLVSVRYVRIVI*PLETIEWPSTLYL*ECRNVTLL*A--WI 3697
              + L   L    P +  + L     VRI I   + + + + L L E +++ ++    W+
Sbjct: 604  EVEDLRRPLMVSTPSNQALSLQRSPSVRIEI---QGVPFLANLILLESKDLDVILGMDWL 660

Query: 3696 GCHRTRRYCIVLKRKFLF*Q*MRTVILFKGRGGRLILHHFHLRRDEMRQRNI*HI*RI*R 3517
              H+    C   K            +      GR++  H  L  + +R R          
Sbjct: 661  ARHKGVIDCANRK------------VTLNSYDGRVVTVHA-LSSEFLRSR---------- 697

Query: 3516 RRNKVT-KDARIV*EFPDVFPEAFPGLLPKREINFVIDVQSGTAPISLSPYRMAPK*MKD 3340
              N++T ++  IV E+PDVFP+  PG+ PKR+I F ID+  GT PI   PYRMA   + +
Sbjct: 698  -LNQITLEEIPIVREYPDVFPDDLPGMPPKRDIEFRIDLVPGTTPIHTRPYRMAANELAE 756

Query: 3339 LWKQLDELLELGFIRPRTSPWRARVLFVLKKDGTMRMCIDYRKLNQVTIKNKYPLPRIDD 3160
            + +Q+D+LL+ G+IRP +SPW A V+FV KKD T RMC+DYR LN VTIKN+YPLPRIDD
Sbjct: 757  VKRQVDDLLQKGYIRPSSSPWGAPVIFVEKKDHTQRMCVDYRALNDVTIKNEYPLPRIDD 816

Query: 3159 LFDQLKGAMCFTKIDLRMGYHQMRIREEDILKTTFGTCYGHYEFLVMPFGLKNAHAAFMD 2980
            LFDQLKGA  F+KIDLR GYHQ+RI+EEDI KT F T YG +E  VM FGL NA A FM+
Sbjct: 817  LFDQLKGATVFSKIDLRSGYHQLRIKEEDIPKTAFTTRYGLFECTVMSFGLTNAPAFFMN 876

Query: 2979 LMNRVFRPYINQFVVVFIDDVLIYSKSEEEHEKRLQIVLQTLREHKLYAKRSKCEFWISE 2800
            LMN+VF  Y+++FVVVFIDD+LIYS+++EEHE+ L++ L+ LREH+LYAK SKCEFW+SE
Sbjct: 877  LMNKVFMEYLDKFVVVFIDDILIYSRTKEEHEEHLRLALEKLREHQLYAKFSKCEFWLSE 936

Query: 2799 VLFLGHVISDQGIVVDPEKIAAVVEWKLQKNVFEV*SFLGL 2677
            V FLGHVIS  G+ VDP  + +V  WK  K V E+ SFLGL
Sbjct: 937  VKFLGHVISAGGVAVDPSNVESVTNWKQPKTVSEIRSFLGL 977



 Score =  324 bits (830), Expect(3) = 0.0
 Identities = 160/321 (49%), Positives = 230/321 (71%), Gaps = 5/321 (1%)
 Frame = -2

Query: 2689 FLGIGGYYRRFVENFSRLAVPLTHLTKKGVKFE*TDKCERAFEKLKHRLISAPILTTPEP 2510
            FLG+ GYYRRF+ENFS++A P+T L +K VK++ +++CE++F++LK RLISAPIL  P+P
Sbjct: 974  FLGLAGYYRRFIENFSKIAKPMTRLLQKDVKYKWSEECEQSFQELKSRLISAPILILPDP 1033

Query: 2509 RLGYEVYCDASGIGLGGVLMQKGKVIAYASR*LKTYEKNYTTYDLELAAVVFVLKLWRHY 2330
            + G++VYCDAS  GLG VLMQ+GKV+AYASR L+ +EKNY T+D+ELAAVV  LK+WRHY
Sbjct: 1034 KKGFQVYCDASKFGLGCVLMQEGKVVAYASRQLRPHEKNYPTHDIELAAVVHALKIWRHY 1093

Query: 2329 LYGENFFVFYDHKSLKYMFIQKDLNMRQIRWFELLKDYEFTLNYHPGKGNVVADALSRKE 2150
            L+G    V+ DHKSLKY+F Q DLNMRQ RW EL+KDY+  ++YHPGK NVVADALSRK 
Sbjct: 1094 LFGTRTEVYTDHKSLKYIFTQPDLNMRQRRWLELIKDYDMGIHYHPGKANVVADALSRKG 1153

Query: 2149 Y-----GSIASLRMIEDVRNLDLVVDFDDEKAFLYHLAVIPEIVKKVIKAQSTDISLQQV 1985
            Y     G    L + ++   L+L +     + F+  L   P ++ +V +AQ  D  +Q++
Sbjct: 1154 YCNATEGRQLPLELCKEFERLNLGI---VGRGFVAALEAKPTLIDQVREAQINDPDIQEI 1210

Query: 1984 RGKLSMGEAPVNWSLETNGGIYFKGRLCVPDDEYL*KEILTMAHESVLTLHPGSTKMNYD 1805
            + K+  G+A + +  + +G ++   R+CVPD++ L   IL  AH+++ ++HPGSTKM  D
Sbjct: 1211 KKKMRRGKA-IGFLEDEHGTVWLGERICVPDNKDLKDAILKEAHDTLYSIHPGSTKMYQD 1269

Query: 1804 LRCQFWWRGMMKDIALFVSRC 1742
            L+ +FWW  M ++IA +V+ C
Sbjct: 1270 LKERFWWASMKREIAEYVAVC 1290


>gb|ABA97771.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
            Japonica Group]
          Length = 2174

 Score =  409 bits (1050), Expect(3) = 0.0
 Identities = 196/373 (52%), Positives = 263/373 (70%)
 Frame = -1

Query: 1736 CQQVKAEHQRPAGPLQPLPIAE*KWDSIAMDFVRGLPKGQQGRDSVWVIIDRLTKSAHFL 1557
            CQ+VKAEHQ+PAG LQPL I E KW+ I MDF+ GLP+   G DS+WVI+DRLTK AHF+
Sbjct: 1789 CQRVKAEHQKPAGLLQPLKIPEWKWEEIGMDFITGLPRTSSGHDSIWVIVDRLTKVAHFI 1848

Query: 1556 PVRQADNITTLSNLYIREIVKLHGMPMSIVSDRDPLFTSKFWGRFQLSMGSTLSMSSVFH 1377
            PV+   + + L+ LY+  IV LHG+P  IVSDR   FTS FW + Q  MGS L+ S+ +H
Sbjct: 1849 PVKTTYSGSRLAELYMARIVCLHGVPKKIVSDRGSQFTSNFWKKLQEEMGSKLNFSTAYH 1908

Query: 1376 P*TYGQSERTIQVLEYMLRDCALEFKGNWSEQLPLVEFAYNNIY*SSIRMAPFEALYGRP 1197
            P T GQ+ER  Q+LE MLR CAL+F G+W + LP  EF+YNN Y +S++MAP+EALYGR 
Sbjct: 1909 PQTDGQTERVNQILEDMLRACALDFGGSWDKNLPYAEFSYNNSYQASLQMAPYEALYGRK 1968

Query: 1196 FRTPLCWAEVSDRSVMGPAVVKETTEKIKVIQDRLRTAQSRQKSYAGQRRRPLEFAVGDQ 1017
             RTPL W +  +R V G  +++E  EK+K+IQ+RLR AQSR KSYA  RRR L F  GD 
Sbjct: 1969 CRTPLLWDQTGERQVFGTDILREAEEKVKIIQERLRVAQSRHKSYADNRRRDLSFEEGDY 2028

Query: 1016 VFLKVSPRPGIKRFGKKSKLAPRYIGPFEILQRIGEVAYRLALPTSLADVHNVFHVSMLR 837
            V+L+V+P  G+ RF  K KLAPR++GP++I+ R GEVAY+L LP SLA VHNVFHVS L+
Sbjct: 2029 VYLRVTPLRGVHRFHTKGKLAPRFVGPYKIVSRRGEVAYQLELPQSLAGVHNVFHVSQLK 2088

Query: 836  KYHADPSHIIEWQDIQLNEYVTYEERPLRVVDSK*QVLRNKTIKLVKVIWQHHNSKEMTW 657
            K    P+     + I++ E +TY E+P+R++++  +  RN+ I+  KV W +H+ +E TW
Sbjct: 2089 KCLRVPTEEANIEQIEVQEDLTYVEKPIRILETSERRTRNRVIRFCKVQWSNHSEEESTW 2148

Query: 656  ELESEIRKKYQDL 618
            E E E++  +  L
Sbjct: 2149 EREDELKSAHPHL 2161



 Score =  380 bits (976), Expect(3) = 0.0
 Identities = 228/521 (43%), Positives = 306/521 (58%), Gaps = 6/521 (1%)
 Frame = -3

Query: 4221 YNCGQVGHFDRECPLXXXXXXXXXXXXXXXXXVCRPQNHPCTQNIGGRPQNQSRTVTLAF 4042
            +NCG  GH+  +CP                    +P+            QN S       
Sbjct: 1014 FNCGDPGHYADKCP--------------------KPRRVKVVP-----AQNNSAV----- 1043

Query: 4041 QPRQPNVQGKLNYVA*GNGGEENTVIEGNFLIFSSRAKVLFDTGATYSFISLHLAAYLGL 3862
                P  + ++N+VA     +   VI G FL+ S  A VLFD+GAT+SF+S   A   G+
Sbjct: 1044 ----PASKARVNHVAAAEAQDAPDVILGTFLVNSVPATVLFDSGATHSFLSTSFAGNHGM 1099

Query: 3861 NYDFLEFNLY---PLHLEVLLVSVRYVRIVI*PLETIEWPSTLYL*ECRNVTLL*A--WI 3697
              + L   L    P +  + L     VRI I   + + + + L L + +++ ++    W+
Sbjct: 1100 EVEDLRRPLMVSTPSNQALSLQRSPSVRIEI---QGVPFLANLILLKSKDLDVILGMDWL 1156

Query: 3696 GCHRTRRYCIVLKRKFLF*Q*MRTVILFKGRGGRLILHHFHLRRDEMRQRNI*HI*RI*R 3517
              H+    C   K            +      GR++  H  L  + +R R          
Sbjct: 1157 ARHKGVIDCANRK------------VTLNSYDGRVVTVHA-LSSESLRSR---------- 1193

Query: 3516 RRNKVT-KDARIV*EFPDVFPEAFPGLLPKREINFVIDVQSGTAPISLSPYRMAPK*MKD 3340
              N++T ++  IV E+PDVFP+  PG+ PKR+I F ID+  GT PI   PYRMA   + +
Sbjct: 1194 -LNQITLEEIPIVREYPDVFPDDLPGMPPKRDIEFRIDLVPGTTPIHKRPYRMAANELAE 1252

Query: 3339 LWKQLDELLELGFIRPRTSPWRARVLFVLKKDGTMRMCIDYRKLNQVTIKNKYPLPRIDD 3160
            + +Q+D+LL+ G+IRP +SPW A V+FV KKD T RMC+DYR LN VTIKNKYPLPRIDD
Sbjct: 1253 VKRQVDDLLQKGYIRPSSSPWGAPVIFVEKKDHTQRMCVDYRALNDVTIKNKYPLPRIDD 1312

Query: 3159 LFDQLKGAMCFTKIDLRMGYHQMRIREEDILKTTFGTCYGHYEFLVMPFGLKNAHAAFMD 2980
            LFDQLKGA  F+KIDLR GYHQ+RI+EEDI KTTF T YG +E  VM FGL NA A FM+
Sbjct: 1313 LFDQLKGATVFSKIDLRSGYHQLRIKEEDIPKTTFTTRYGLFECTVMSFGLTNAPAFFMN 1372

Query: 2979 LMNRVFRPYINQFVVVFIDDVLIYSKSEEEHEKRLQIVLQTLREHKLYAKRSKCEFWISE 2800
            LMN+VF  Y+++FVVVFIDD+LIYS+++EEHE+ L++ L+ LREH+LYAK SKCEFW+SE
Sbjct: 1373 LMNKVFMEYLDKFVVVFIDDILIYSRTKEEHEEHLRLALEKLREHQLYAKFSKCEFWLSE 1432

Query: 2799 VLFLGHVISDQGIVVDPEKIAAVVEWKLQKNVFEV*SFLGL 2677
            V FLGHVIS  G+ VDP  + +V  WK  K V E+ SFLGL
Sbjct: 1433 VKFLGHVISAGGVAVDPSNVESVTNWKQPKTVSEIRSFLGL 1473



 Score =  320 bits (820), Expect(3) = 0.0
 Identities = 159/322 (49%), Positives = 230/322 (71%), Gaps = 6/322 (1%)
 Frame = -2

Query: 2689 FLGIGGYYRRFVENFSRLAVPLTHLTKKGVKFE*TDKCERAFEKLKHRLISAPILTTPEP 2510
            FLG+ GYYRRF+ENFS++A P+T L +K VK++ +++CE++F++LK RLISAPIL  P+P
Sbjct: 1470 FLGLAGYYRRFIENFSKIAKPMTRLLQKDVKYKWSEECEQSFQELKSRLISAPILILPDP 1529

Query: 2509 RLGYEVYCDASGIGLGGVLMQKGKVIAYASR*LKTYEKNYTTYDLELAAVVFVLKLWRHY 2330
            + G++V+CDAS +GLG VLMQ GKV+AYASR L+ +EKNY T+D+ELAAVV  LK+W HY
Sbjct: 1530 KKGFQVHCDASKLGLGCVLMQDGKVVAYASRQLRPHEKNYPTHDIELAAVVHALKIWHHY 1589

Query: 2329 LYGENFFVFYDHKSLKYMFIQKDLNMRQIRWFELLKDYEFTLNYHPGKGNVVADALSRKE 2150
            L+G    V+ DHKSLKY+F Q DLNMRQ RW EL+KDY+  ++YHPGK NVVADALSRK 
Sbjct: 1590 LFGTRTEVYTDHKSLKYIFTQPDLNMRQRRWLELIKDYDMGIHYHPGKANVVADALSRKG 1649

Query: 2149 Y-----GSIASLRMIEDVRNLDL-VVDFDDEKAFLYHLAVIPEIVKKVIKAQSTDISLQQ 1988
            Y     G    L + ++   L+L +VD    + F+  L   P ++ +V +AQ  D  +Q+
Sbjct: 1650 YCNATEGRQLPLELCKEFERLNLGIVD----RGFVAALEAKPTLIDQVREAQINDPDIQE 1705

Query: 1987 VRGKLSMGEAPVNWSLETNGGIYFKGRLCVPDDEYL*KEILTMAHESVLTLHPGSTKMNY 1808
            ++  +  G+A + +  + +G ++   R+CVPD++ L   IL  AH+++ ++HPGSTKM  
Sbjct: 1706 IKKNMRRGKA-IGFLEDEHGTVWLGERICVPDNKDLKDAILKEAHDTLYSIHPGSTKMYQ 1764

Query: 1807 DLRCQFWWRGMMKDIALFVSRC 1742
            DL+ +FWW  M ++IA +V+ C
Sbjct: 1765 DLKERFWWASMKREIAEYVAVC 1786


>gb|AAL78097.1|AC093568_7 Putative polyprotein [Oryza sativa] gi|31430586|gb|AAP52480.1|
            retrotransposon protein, putative, Ty3-gypsy subclass
            [Oryza sativa Japonica Group]
          Length = 1473

 Score =  406 bits (1043), Expect(3) = 0.0
 Identities = 194/370 (52%), Positives = 262/370 (70%)
 Frame = -1

Query: 1736 CQQVKAEHQRPAGPLQPLPIAE*KWDSIAMDFVRGLPKGQQGRDSVWVIIDRLTKSAHFL 1557
            CQ+VKAEHQ+PAG LQPL I E KW+ I MDF+ GLP+   G DS+WVI+DRLTK AHF+
Sbjct: 1088 CQRVKAEHQKPAGLLQPLKIPEWKWEEIGMDFITGLPRTSSGHDSIWVIVDRLTKVAHFI 1147

Query: 1556 PVRQADNITTLSNLYIREIVKLHGMPMSIVSDRDPLFTSKFWGRFQLSMGSTLSMSSVFH 1377
            PV+   + + L+ LY+  IV LHG+P  IVSDR   FTS FW + Q  MGS L+ S+ +H
Sbjct: 1148 PVKTTYSGSRLAELYMARIVCLHGVPKKIVSDRGSQFTSNFWKKLQEEMGSKLNFSTAYH 1207

Query: 1376 P*TYGQSERTIQVLEYMLRDCALEFKGNWSEQLPLVEFAYNNIY*SSIRMAPFEALYGRP 1197
            P T GQ+ER  Q+LE MLR CAL+F G+W + LP  EF+YNN Y +S++MAP+EALYGR 
Sbjct: 1208 PQTDGQTERVNQILEDMLRACALDFGGSWDKNLPYAEFSYNNSYQASLQMAPYEALYGRK 1267

Query: 1196 FRTPLCWAEVSDRSVMGPAVVKETTEKIKVIQDRLRTAQSRQKSYAGQRRRPLEFAVGDQ 1017
             RTPL W +  +R V G  +++E  EK+K+IQ+RLR AQSR KSYA  RRR L F  GD 
Sbjct: 1268 CRTPLLWDQTGERQVFGTDILREAEEKVKIIQERLRVAQSRHKSYADNRRRDLSFEEGDY 1327

Query: 1016 VFLKVSPRPGIKRFGKKSKLAPRYIGPFEILQRIGEVAYRLALPTSLADVHNVFHVSMLR 837
            V+L+V+P  G+ RF  K KLAPR++GP++I+ R GEVAY+L LP SLA VH+VFHVS L+
Sbjct: 1328 VYLRVTPLRGVHRFQTKGKLAPRFVGPYKIVSRRGEVAYQLELPQSLAGVHDVFHVSQLK 1387

Query: 836  KYHADPSHIIEWQDIQLNEYVTYEERPLRVVDSK*QVLRNKTIKLVKVIWQHHNSKEMTW 657
            K    P+     + I++ E +TY E+P+R++++  +  RN+ I+  KV W +H+ +E TW
Sbjct: 1388 KCLRVPTEEANIEQIEVQEDLTYVEKPIRILETSERRTRNRVIRFCKVQWSNHSEEESTW 1447

Query: 656  ELESEIRKKY 627
            E E E++  +
Sbjct: 1448 EREDELKSAH 1457



 Score =  380 bits (977), Expect(3) = 0.0
 Identities = 227/521 (43%), Positives = 307/521 (58%), Gaps = 6/521 (1%)
 Frame = -3

Query: 4221 YNCGQVGHFDRECPLXXXXXXXXXXXXXXXXXVCRPQNHPCTQNIGGRPQNQSRTVTLAF 4042
            +NCG  GH+  +CP                                 +P+ + + V +  
Sbjct: 313  FNCGDPGHYADKCP---------------------------------KPR-RVKVVPVQN 338

Query: 4041 QPRQPNVQGKLNYVA*GNGGEENTVIEGNFLIFSSRAKVLFDTGATYSFISLHLAAYLGL 3862
                P  + ++N+VA     +   VI G FL+ S  A VLFD+GAT+SF+S+  A   G+
Sbjct: 339  NSAVPASKARVNHVAAAEAQDAPDVILGTFLVNSVPATVLFDSGATHSFLSMSFAGNHGM 398

Query: 3861 NYDFLEFNLY---PLHLEVLLVSVRYVRIVI*PLETIEWPSTLYL*ECRNVTLL*A--WI 3697
              + L   L    P +  + L     VRI I   + + + + L L E +++ ++    W+
Sbjct: 399  EVEDLRRPLMVSTPSNQALSLQRSPSVRIEI---KGVPFLANLILLESKDLDVILGMDWL 455

Query: 3696 GCHRTRRYCIVLKRKFLF*Q*MRTVILFKGRGGRLILHHFHLRRDEMRQRNI*HI*RI*R 3517
              H+    C   K            +      GR++  H  L  + +R R          
Sbjct: 456  ARHKGVIDCANRK------------VTLNSYDGRVVTVHA-LSSESLRSR---------- 492

Query: 3516 RRNKVT-KDARIV*EFPDVFPEAFPGLLPKREINFVIDVQSGTAPISLSPYRMAPK*MKD 3340
              N+VT ++  IV E+PDVFP+  PG+ PKR+I F ID+  GT PI   PYRMA   + +
Sbjct: 493  -LNQVTLEEIPIVREYPDVFPDDLPGMPPKRDIEFRIDLVPGTTPIHKRPYRMAANELAE 551

Query: 3339 LWKQLDELLELGFIRPRTSPWRARVLFVLKKDGTMRMCIDYRKLNQVTIKNKYPLPRIDD 3160
            + +Q+D+LL+ G+IRP +SPW A V+FV KKD T RMC+DYR LN VTIKNKYPLPRIDD
Sbjct: 552  VKRQVDDLLQKGYIRPSSSPWGAPVIFVEKKDHTQRMCVDYRALNDVTIKNKYPLPRIDD 611

Query: 3159 LFDQLKGAMCFTKIDLRMGYHQMRIREEDILKTTFGTCYGHYEFLVMPFGLKNAHAAFMD 2980
            LFDQLKGA  F+KIDLR GYHQ+RI+EEDI KT F T YG +E  VM FGL NA A FM+
Sbjct: 612  LFDQLKGATVFSKIDLRSGYHQLRIKEEDIPKTAFITRYGLFECTVMSFGLTNAPAFFMN 671

Query: 2979 LMNRVFRPYINQFVVVFIDDVLIYSKSEEEHEKRLQIVLQTLREHKLYAKRSKCEFWISE 2800
            LMN+VF  Y+++FVVVFIDD+LIYS+++EEHE+ L++ L+ LREH+LYAK SKCEFW+SE
Sbjct: 672  LMNKVFMEYLDKFVVVFIDDILIYSRTKEEHEEHLRLALEKLREHQLYAKFSKCEFWLSE 731

Query: 2799 VLFLGHVISDQGIVVDPEKIAAVVEWKLQKNVFEV*SFLGL 2677
            V FLGHVIS  G+ VDP  + +V  WK  K V E+ SFLGL
Sbjct: 732  VKFLGHVISAGGVAVDPSNVESVTNWKQPKTVSEIRSFLGL 772



 Score =  321 bits (823), Expect(3) = 0.0
 Identities = 158/321 (49%), Positives = 229/321 (71%), Gaps = 5/321 (1%)
 Frame = -2

Query: 2689 FLGIGGYYRRFVENFSRLAVPLTHLTKKGVKFE*TDKCERAFEKLKHRLISAPILTTPEP 2510
            FLG+ GYYRRF+ENFS++A P+T L +K VK++ +++CE++F++LK+RL+SAPIL  P+P
Sbjct: 769  FLGLAGYYRRFIENFSKIAKPMTRLLQKDVKYKWSEECEQSFQELKNRLVSAPILILPDP 828

Query: 2509 RLGYEVYCDASGIGLGGVLMQKGKVIAYASR*LKTYEKNYTTYDLELAAVVFVLKLWRHY 2330
            + G++VYCDAS +GLG VLMQ GKV+AYASR L+ +EKNY T+DL+LAAVV  LK+WRHY
Sbjct: 829  KKGFQVYCDASKLGLGCVLMQDGKVVAYASRQLRPHEKNYPTHDLKLAAVVHALKIWRHY 888

Query: 2329 LYGENFFVFYDHKSLKYMFIQKDLNMRQIRWFELLKDYEFTLNYHPGKGNVVADALSRKE 2150
            L+G    V+ DHKSLKY+F Q DLNMRQ RW EL+KDY+  ++YHPGK NVVADALSRK 
Sbjct: 889  LFGTRTEVYTDHKSLKYIFTQPDLNMRQRRWLELIKDYDMGIHYHPGKANVVADALSRKG 948

Query: 2149 Y-----GSIASLRMIEDVRNLDLVVDFDDEKAFLYHLAVIPEIVKKVIKAQSTDISLQQV 1985
            Y     G    L + ++   L+L +     + F+  L   P ++ +V +AQ  D  +Q++
Sbjct: 949  YCNATEGRQLPLELCKEFERLNLGI---VSRGFVAALEAKPTLIDQVREAQINDPDIQEI 1005

Query: 1984 RGKLSMGEAPVNWSLETNGGIYFKGRLCVPDDEYL*KEILTMAHESVLTLHPGSTKMNYD 1805
            +     G+A + +  + +G ++   R+CVPD++ L   IL  AH+++ ++HPGSTKM  D
Sbjct: 1006 KKNRRRGKA-IGFLEDEHGTVWLGERICVPDNKDLKDAILKEAHDTLYSIHPGSTKMYQD 1064

Query: 1804 LRCQFWWRGMMKDIALFVSRC 1742
            L+ +FWW  M ++IA +V+ C
Sbjct: 1065 LKKRFWWASMKREIAEYVAVC 1085


>gb|ABA96234.2| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
            Japonica Group]
          Length = 1407

 Score =  406 bits (1043), Expect(3) = 0.0
 Identities = 196/373 (52%), Positives = 261/373 (69%)
 Frame = -1

Query: 1736 CQQVKAEHQRPAGPLQPLPIAE*KWDSIAMDFVRGLPKGQQGRDSVWVIIDRLTKSAHFL 1557
            CQ+VKAEHQ+PAG LQPL I E KW+ I MDF+ GLP+   G DS+WVI+DRLTK AHF+
Sbjct: 1022 CQRVKAEHQKPAGLLQPLKIPEWKWEEIGMDFITGLPRTSSGHDSIWVIVDRLTKVAHFI 1081

Query: 1556 PVRQADNITTLSNLYIREIVKLHGMPMSIVSDRDPLFTSKFWGRFQLSMGSTLSMSSVFH 1377
            PV+   + + L+ LY+  IV LHG+P  IVSDR   FTS FW + Q  MGS L+ S+ +H
Sbjct: 1082 PVKTTYSGSRLAELYMARIVCLHGVPKKIVSDRGSQFTSNFWKKLQEEMGSKLNFSTAYH 1141

Query: 1376 P*TYGQSERTIQVLEYMLRDCALEFKGNWSEQLPLVEFAYNNIY*SSIRMAPFEALYGRP 1197
            P T GQ+ER  Q+LE MLR CAL+F G+W + LP  EF+YNN Y +S++MAP+EALYGR 
Sbjct: 1142 PQTDGQTERVNQILEDMLRACALDFGGSWDKNLPYAEFSYNNSYQASLQMAPYEALYGRK 1201

Query: 1196 FRTPLCWAEVSDRSVMGPAVVKETTEKIKVIQDRLRTAQSRQKSYAGQRRRPLEFAVGDQ 1017
             RTPL W +  +R V G  +++E  EK+K+IQ+RLR AQSR KSYA  RRR L F  GD 
Sbjct: 1202 CRTPLLWDQTGERQVFGTDLLREAEEKVKIIQERLRVAQSRHKSYADNRRRDLSFEEGDY 1261

Query: 1016 VFLKVSPRPGIKRFGKKSKLAPRYIGPFEILQRIGEVAYRLALPTSLADVHNVFHVSMLR 837
            V+L+V+P  G+ RF  K KLAPR++GP++I+ R GEVAY+L LP SLA VHNVFHVS L+
Sbjct: 1262 VYLRVTPFRGVHRFHTKGKLAPRFVGPYKIVSRRGEVAYQLELPQSLAGVHNVFHVSQLK 1321

Query: 836  KYHADPSHIIEWQDIQLNEYVTYEERPLRVVDSK*QVLRNKTIKLVKVIWQHHNSKEMTW 657
            K    P+       I++ E +TY E+P+R+++   +  RN+ I+  KV W +H+ +E TW
Sbjct: 1322 KCLRVPTEEANLDQIEVQEDLTYVEKPIRILEISERRTRNRVIRFCKVQWSNHSEEESTW 1381

Query: 656  ELESEIRKKYQDL 618
            E E E++  +  L
Sbjct: 1382 EREDELKSAHPHL 1394



 Score =  377 bits (967), Expect(3) = 0.0
 Identities = 227/521 (43%), Positives = 304/521 (58%), Gaps = 6/521 (1%)
 Frame = -3

Query: 4221 YNCGQVGHFDRECPLXXXXXXXXXXXXXXXXXVCRPQNHPCTQNIGGRPQNQSRTVTLAF 4042
            +NCG  GH+  +CP                    +P+            QN S       
Sbjct: 247  FNCGDPGHYADKCP--------------------KPRRMKVVP-----AQNNSAV----- 276

Query: 4041 QPRQPNVQGKLNYVA*GNGGEENTVIEGNFLIFSSRAKVLFDTGATYSFISLHLAAYLGL 3862
                P  + ++N+VA     +   VI G FL+ S  A VLFD+GAT+SF+S+  A   G+
Sbjct: 277  ----PASKARVNHVAAAEAQDAPDVILGMFLVNSVPATVLFDSGATHSFLSMSFAGNHGM 332

Query: 3861 NYDFLEFNLY---PLHLEVLLVSVRYVRIVI*PLETIEWPSTLYL*ECRNVTLL*A--WI 3697
              + L   L    P +  + L     VRI I   + + + + L L E +++ ++    W+
Sbjct: 333  EVEDLRRPLMVSTPSNQALSLQRSPSVRIEI---QGVPFLANLILLESKDLDVILGMDWL 389

Query: 3696 GCHRTRRYCIVLKRKFLF*Q*MRTVILFKGRGGRLILHHFHLRRDEMRQRNI*HI*RI*R 3517
              H+    C   K            +      GR++  H  L  + +R R          
Sbjct: 390  ARHKGVIDCANKK------------VTLTSYDGRVVTVHA-LSSESLRSR---------- 426

Query: 3516 RRNKVT-KDARIV*EFPDVFPEAFPGLLPKREINFVIDVQSGTAPISLSPYRMAPK*MKD 3340
              N++T ++  IV E+PDVFP+  PG+ PKR+I F ID+  GT PI   PYRMA   + +
Sbjct: 427  -LNQITLEEIPIVREYPDVFPDDLPGMPPKRDIEFRIDLVPGTTPIHKRPYRMAANELAE 485

Query: 3339 LWKQLDELLELGFIRPRTSPWRARVLFVLKKDGTMRMCIDYRKLNQVTIKNKYPLPRIDD 3160
            + +Q+D+LL+ G+IRP +SPW A V+FV KKD T RMC+DYR LN VTIKNKYPLPRIDD
Sbjct: 486  VKRQVDDLLQKGYIRPSSSPWGAPVIFVEKKDHTQRMCVDYRALNDVTIKNKYPLPRIDD 545

Query: 3159 LFDQLKGAMCFTKIDLRMGYHQMRIREEDILKTTFGTCYGHYEFLVMPFGLKNAHAAFMD 2980
            LFDQLKGA  F KIDLR GYHQ+RI+EEDI KT F T YG +E  VM FGL NA A F +
Sbjct: 546  LFDQLKGATVFFKIDLRSGYHQLRIKEEDIPKTAFTTRYGLFECTVMSFGLTNAPAFFRN 605

Query: 2979 LMNRVFRPYINQFVVVFIDDVLIYSKSEEEHEKRLQIVLQTLREHKLYAKRSKCEFWISE 2800
            LMN+VF  Y+++FVVVFIDD+LIYS+++EEHE+ L++ L+ LREH+LYAK SKCEFW+SE
Sbjct: 606  LMNKVFMEYLDKFVVVFIDDILIYSRTKEEHEEHLRLALEKLREHQLYAKFSKCEFWLSE 665

Query: 2799 VLFLGHVISDQGIVVDPEKIAAVVEWKLQKNVFEV*SFLGL 2677
            V FLGHVIS  G+ VDP  + +V  WK  K V E+ SFLGL
Sbjct: 666  VKFLGHVISAGGVAVDPSNVESVTNWKQPKTVSEIRSFLGL 706



 Score =  325 bits (832), Expect(3) = 0.0
 Identities = 161/321 (50%), Positives = 228/321 (71%), Gaps = 5/321 (1%)
 Frame = -2

Query: 2689 FLGIGGYYRRFVENFSRLAVPLTHLTKKGVKFE*TDKCERAFEKLKHRLISAPILTTPEP 2510
            FLG+ GYYRRF+ENFS++A P+T L +K VK++ +++CER+F++LK RLISAPIL  P+P
Sbjct: 703  FLGLAGYYRRFIENFSKIAKPMTRLLQKDVKYKWSEECERSFQELKSRLISAPILILPDP 762

Query: 2509 RLGYEVYCDASGIGLGGVLMQKGKVIAYASR*LKTYEKNYTTYDLELAAVVFVLKLWRHY 2330
            + G++VYCDAS +GLG VLMQ GKV+AYASR L+ +EKNY T+DLELAAVV  LK+WRHY
Sbjct: 763  KKGFQVYCDASKLGLGCVLMQDGKVVAYASRQLRPHEKNYPTHDLELAAVVHALKIWRHY 822

Query: 2329 LYGENFFVFYDHKSLKYMFIQKDLNMRQIRWFELLKDYEFTLNYHPGKGNVVADALSRKE 2150
            L+G    V+ DHKSLKY+F Q DLNMRQ RW EL+KDY+  ++YHPGK NVVADALSRK 
Sbjct: 823  LFGTRTEVYTDHKSLKYIFTQPDLNMRQRRWLELIKDYDMGIHYHPGKANVVADALSRKG 882

Query: 2149 Y-----GSIASLRMIEDVRNLDLVVDFDDEKAFLYHLAVIPEIVKKVIKAQSTDISLQQV 1985
            Y     G    L + ++   L+L +     + F+  L   P ++ +V +AQ  D  +Q++
Sbjct: 883  YCNATEGRQLPLELCKEFERLNLGI---VSRGFVAALEAKPTLIDQVREAQINDPDIQEI 939

Query: 1984 RGKLSMGEAPVNWSLETNGGIYFKGRLCVPDDEYL*KEILTMAHESVLTLHPGSTKMNYD 1805
            +  +  G+A + +  +  G ++   R+CVPD++ L   IL  AH+++ ++HPGSTKM  D
Sbjct: 940  KKNMRRGKA-IGFLEDEQGTVWLGERICVPDNKDLKDAILKEAHDTLYSIHPGSTKMYQD 998

Query: 1804 LRCQFWWRGMMKDIALFVSRC 1742
            L+ +FWW  M ++IA +V+ C
Sbjct: 999  LKERFWWASMKREIAEYVAVC 1019


>emb|CAE04776.3| OSJNBb0115I21.3 [Oryza sativa Japonica Group]
          Length = 1779

 Score =  409 bits (1051), Expect(3) = 0.0
 Identities = 197/373 (52%), Positives = 263/373 (70%)
 Frame = -1

Query: 1736 CQQVKAEHQRPAGPLQPLPIAE*KWDSIAMDFVRGLPKGQQGRDSVWVIIDRLTKSAHFL 1557
            CQ+VKAEHQ+PAG LQPL I E KW+ I MDF+ GLP+   G DS+WVI+DRLTK AHF+
Sbjct: 1394 CQRVKAEHQKPAGLLQPLKIPEWKWEEIGMDFITGLPRTSSGHDSIWVIVDRLTKVAHFI 1453

Query: 1556 PVRQADNITTLSNLYIREIVKLHGMPMSIVSDRDPLFTSKFWGRFQLSMGSTLSMSSVFH 1377
            PV+   + + L+ LY+  IV LHG+P  IVSDR   FTS FW + Q  MGS L+ S+ +H
Sbjct: 1454 PVKTTYSGSRLAELYMARIVCLHGVPKKIVSDRGSQFTSNFWKKLQEEMGSKLNFSTAYH 1513

Query: 1376 P*TYGQSERTIQVLEYMLRDCALEFKGNWSEQLPLVEFAYNNIY*SSIRMAPFEALYGRP 1197
            P T GQ+ER  Q+LE MLR CAL+F G+W + LP  EF+YNN Y +S++MAP+EALYGR 
Sbjct: 1514 PQTDGQTERVNQILEDMLRACALDFGGSWDKNLPYAEFSYNNSYQASLQMAPYEALYGRK 1573

Query: 1196 FRTPLCWAEVSDRSVMGPAVVKETTEKIKVIQDRLRTAQSRQKSYAGQRRRPLEFAVGDQ 1017
             RTPL W +  +R V G  +++E  EK+KVIQ+RLR AQSR KSYA  RRR L F  GD 
Sbjct: 1574 CRTPLLWDQTGERQVFGTDILREAEEKVKVIQERLRVAQSRHKSYADNRRRDLSFEEGDY 1633

Query: 1016 VFLKVSPRPGIKRFGKKSKLAPRYIGPFEILQRIGEVAYRLALPTSLADVHNVFHVSMLR 837
            V+L+V+P  G+ RF  K KLAPR++GP++I+ R GEVAY+L LP SLA VHNVFHVS L+
Sbjct: 1634 VYLRVTPLRGVHRFHTKGKLAPRFVGPYKIVSRRGEVAYQLELPQSLAGVHNVFHVSQLK 1693

Query: 836  KYHADPSHIIEWQDIQLNEYVTYEERPLRVVDSK*QVLRNKTIKLVKVIWQHHNSKEMTW 657
            K    P+     + I++ E +TY E+P+R++++  +  RN+ I+  KV W +H+ +E TW
Sbjct: 1694 KCLRVPTEEANIEQIEVQEDLTYVEKPIRILETNERRTRNRVIRFCKVQWSNHSEEESTW 1753

Query: 656  ELESEIRKKYQDL 618
            E E E++  +  L
Sbjct: 1754 EREDELKSAHPHL 1766



 Score =  378 bits (970), Expect(3) = 0.0
 Identities = 227/521 (43%), Positives = 305/521 (58%), Gaps = 6/521 (1%)
 Frame = -3

Query: 4221 YNCGQVGHFDRECPLXXXXXXXXXXXXXXXXXVCRPQNHPCTQNIGGRPQNQSRTVTLAF 4042
            +NCG  GH+  +CP                    +P+            QN S       
Sbjct: 619  FNCGDPGHYADKCP--------------------KPRRVKVVP-----AQNNSAV----- 648

Query: 4041 QPRQPNVQGKLNYVA*GNGGEENTVIEGNFLIFSSRAKVLFDTGATYSFISLHLAAYLGL 3862
                P  + ++N+VA         VI G FL+ S  A VLFD+GAT+SF+S+  A   G+
Sbjct: 649  ----PASKARVNHVAAAEAQGAPDVILGTFLVNSVPATVLFDSGATHSFLSMSFAGNHGM 704

Query: 3861 NYDFLEFNLY---PLHLEVLLVSVRYVRIVI*PLETIEWPSTLYL*ECRNVTLL*A--WI 3697
              + L   L    P +  + L     VRI I   + + + + L L + +++ ++    W+
Sbjct: 705  EVEDLRRPLMVSTPSNQALSLQRSPSVRIEI---QGVPFLANLILLKSKDLDVILGMDWL 761

Query: 3696 GCHRTRRYCIVLKRKFLF*Q*MRTVILFKGRGGRLILHHFHLRRDEMRQRNI*HI*RI*R 3517
              H+    C   K            +      GR++  H  L  + +R R          
Sbjct: 762  ARHKGVIDCANRK------------VTLNSYDGRVVTVHA-LSSESLRSR---------- 798

Query: 3516 RRNKVT-KDARIV*EFPDVFPEAFPGLLPKREINFVIDVQSGTAPISLSPYRMAPK*MKD 3340
              N++T ++  IV E+PDVFP+  PG+ PKR+I F ID+  GT PI   PYRMA   + +
Sbjct: 799  -LNQITLEEIPIVREYPDVFPDDLPGMPPKRDIEFRIDLVPGTTPIHKRPYRMAANELAE 857

Query: 3339 LWKQLDELLELGFIRPRTSPWRARVLFVLKKDGTMRMCIDYRKLNQVTIKNKYPLPRIDD 3160
            + +Q+D+LL+ G+IRP +SPW A V+FV KKD T RMC+DYR LN VTIKNKYPLPRIDD
Sbjct: 858  VKRQVDDLLQKGYIRPSSSPWGAPVIFVEKKDHTQRMCVDYRALNDVTIKNKYPLPRIDD 917

Query: 3159 LFDQLKGAMCFTKIDLRMGYHQMRIREEDILKTTFGTCYGHYEFLVMPFGLKNAHAAFMD 2980
            LFDQLKGA  F+KIDLR GYHQ+RI+EEDI KT F T YG +E  VM FGL NA A FM+
Sbjct: 918  LFDQLKGATVFSKIDLRSGYHQLRIKEEDIPKTAFTTRYGLFECTVMSFGLTNAPAFFMN 977

Query: 2979 LMNRVFRPYINQFVVVFIDDVLIYSKSEEEHEKRLQIVLQTLREHKLYAKRSKCEFWISE 2800
            LMN+VF  Y+++FVVVFIDD+LIYS+++EEHE+ L++ L+ LREH+LYAK SKCEFW+SE
Sbjct: 978  LMNKVFMEYLDKFVVVFIDDILIYSRTKEEHEEHLRLALEKLREHQLYAKFSKCEFWLSE 1037

Query: 2799 VLFLGHVISDQGIVVDPEKIAAVVEWKLQKNVFEV*SFLGL 2677
            V FLGHVIS  G+ VDP  + +V  WK  K V E+ SFLGL
Sbjct: 1038 VKFLGHVISAGGVAVDPSNVESVTNWKQPKTVSEIRSFLGL 1078



 Score =  320 bits (819), Expect(3) = 0.0
 Identities = 157/321 (48%), Positives = 227/321 (70%), Gaps = 5/321 (1%)
 Frame = -2

Query: 2689 FLGIGGYYRRFVENFSRLAVPLTHLTKKGVKFE*TDKCERAFEKLKHRLISAPILTTPEP 2510
            FLG+ GYYRRF+ENFS++A P+T L +K VK++ +++CE++F++LK RLISAPIL  P+P
Sbjct: 1075 FLGLAGYYRRFIENFSKIAKPMTRLLQKDVKYKWSEECEQSFQELKSRLISAPILILPDP 1134

Query: 2509 RLGYEVYCDASGIGLGGVLMQKGKVIAYASR*LKTYEKNYTTYDLELAAVVFVLKLWRHY 2330
            + G++VYCDAS +GLG VLMQ GKV+AYASR L+ +EKNY T+D+ELAAVV  LK+WRHY
Sbjct: 1135 KKGFQVYCDASKLGLGCVLMQDGKVVAYASRQLRPHEKNYPTHDIELAAVVHALKIWRHY 1194

Query: 2329 LYGENFFVFYDHKSLKYMFIQKDLNMRQIRWFELLKDYEFTLNYHPGKGNVVADALSRKE 2150
            L+G    V+ DHKSLKY+F Q DLNMRQ RW EL+KDY+  ++YHPGK NVV DALSRK 
Sbjct: 1195 LFGTRTEVYTDHKSLKYIFTQPDLNMRQRRWLELIKDYDMGIHYHPGKANVVVDALSRKG 1254

Query: 2149 Y-----GSIASLRMIEDVRNLDLVVDFDDEKAFLYHLAVIPEIVKKVIKAQSTDISLQQV 1985
            Y     G    L + ++   L+L +     + F+  L   P ++ +V +AQ  D  +Q++
Sbjct: 1255 YCNATEGRQLPLELCKEFERLNLGI---VGRGFVAALEAKPTLIDQVREAQINDPDIQEI 1311

Query: 1984 RGKLSMGEAPVNWSLETNGGIYFKGRLCVPDDEYL*KEILTMAHESVLTLHPGSTKMNYD 1805
            +  +  G+A + +  +  G ++   R+CVPD++ L   +L  AH+++ ++HPGSTKM  D
Sbjct: 1312 KKNMRRGKA-IGFLEDEQGTVWLGERICVPDNKDLKDAVLKEAHDTLYSIHPGSTKMYQD 1370

Query: 1804 LRCQFWWRGMMKDIALFVSRC 1742
            L+ +FWW  M ++IA +V+ C
Sbjct: 1371 LKERFWWASMKREIAEYVAVC 1391


>gb|ABB46774.2| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
            Japonica Group]
          Length = 1695

 Score =  408 bits (1049), Expect(3) = 0.0
 Identities = 195/370 (52%), Positives = 262/370 (70%)
 Frame = -1

Query: 1736 CQQVKAEHQRPAGPLQPLPIAE*KWDSIAMDFVRGLPKGQQGRDSVWVIIDRLTKSAHFL 1557
            CQ+VKAEHQ+PAG LQPL I E KW+ I MDF+ GLPK   G DS+WVI+DRLTK AHF+
Sbjct: 1310 CQRVKAEHQKPAGLLQPLKIPEWKWEEIGMDFITGLPKTSLGHDSIWVIVDRLTKVAHFI 1369

Query: 1556 PVRQADNITTLSNLYIREIVKLHGMPMSIVSDRDPLFTSKFWGRFQLSMGSTLSMSSVFH 1377
            PV+   + + L+ LY+  IV LHG+P  IVSDR   FTS FW + Q  MGS L+ S+ +H
Sbjct: 1370 PVKTTYSGSRLAELYMARIVCLHGVPKKIVSDRGSQFTSNFWKKLQEEMGSKLNFSTAYH 1429

Query: 1376 P*TYGQSERTIQVLEYMLRDCALEFKGNWSEQLPLVEFAYNNIY*SSIRMAPFEALYGRP 1197
            P T GQ+ER  Q+LE MLR CAL+F G+W + LP  EF+YNN Y +S++MAP+EALYGR 
Sbjct: 1430 PQTDGQTERVNQILEDMLRACALDFGGSWDKNLPYAEFSYNNSYQASLQMAPYEALYGRK 1489

Query: 1196 FRTPLCWAEVSDRSVMGPAVVKETTEKIKVIQDRLRTAQSRQKSYAGQRRRPLEFAVGDQ 1017
             RTPL W +  +R V G  +++E  EK+K+IQ+RLR AQSR KSYA  RRR L F  GD 
Sbjct: 1490 CRTPLLWDQTGERQVFGTDILREAEEKVKIIQERLRVAQSRHKSYADNRRRDLSFEEGDY 1549

Query: 1016 VFLKVSPRPGIKRFGKKSKLAPRYIGPFEILQRIGEVAYRLALPTSLADVHNVFHVSMLR 837
            V+L+V+P  G+ RF  K KL PR++GP++I+ R GEVAY+L LP SLA+VHNVFHVS L+
Sbjct: 1550 VYLRVTPLRGVHRFHTKGKLVPRFVGPYKIVSRRGEVAYQLELPQSLAEVHNVFHVSQLK 1609

Query: 836  KYHADPSHIIEWQDIQLNEYVTYEERPLRVVDSK*QVLRNKTIKLVKVIWQHHNSKEMTW 657
            K    P+     + I++ E +TY E+P+R++++  +  RN+ I+  KV W +H+ +E TW
Sbjct: 1610 KCLRVPTEEANLEQIEVQEDLTYVEKPIRILETNERRTRNRVIRFCKVQWSNHSEEESTW 1669

Query: 656  ELESEIRKKY 627
            E E E++  +
Sbjct: 1670 EREDELKSAH 1679



 Score =  376 bits (966), Expect(3) = 0.0
 Identities = 225/521 (43%), Positives = 304/521 (58%), Gaps = 6/521 (1%)
 Frame = -3

Query: 4221 YNCGQVGHFDRECPLXXXXXXXXXXXXXXXXXVCRPQNHPCTQNIGGRPQNQSRTVTLAF 4042
            +NCG  GH+  +CP                                 +P++  + V    
Sbjct: 535  FNCGDPGHYADKCP---------------------------------KPRHV-KVVPAQS 560

Query: 4041 QPRQPNVQGKLNYVA*GNGGEENTVIEGNFLIFSSRAKVLFDTGATYSFISLHLAAYLGL 3862
                P  + ++N+VA     +   VI G FL+ S  A VLFD+GAT+SF+S+  A   G+
Sbjct: 561  NSAVPASKARVNHVAAAEAQDAPDVILGTFLVNSVPATVLFDSGATHSFLSMSFAGNHGM 620

Query: 3861 NYDFLEFNLY---PLHLEVLLVSVRYVRIVI*PLETIEWPSTLYL*ECRNVTLL*A--WI 3697
              + L   L    P +  + L     VRI I   + + + + L L E +++ ++    W+
Sbjct: 621  EVEDLRCPLMVSTPSNQALSLQRSPSVRIEI---QGVPFLANLILLESKDLDVILGMDWL 677

Query: 3696 GCHRTRRYCIVLKRKFLF*Q*MRTVILFKGRGGRLILHHFHLRRDEMRQRNI*HI*RI*R 3517
              H+    C   K            +      GR++  H  L  + +R R          
Sbjct: 678  ARHKGVIDCANRK------------VTLTSNDGRVVTVHA-LSSEFLRSR---------- 714

Query: 3516 RRNKVT-KDARIV*EFPDVFPEAFPGLLPKREINFVIDVQSGTAPISLSPYRMAPK*MKD 3340
              N++T ++  IV  +PDVFP+  PG+ PKR+I F  D+  GT PI   PYRMA   + +
Sbjct: 715  -LNQITLEEIPIVRGYPDVFPDDLPGMPPKRDIEFRKDLVPGTTPIHKRPYRMAANELAE 773

Query: 3339 LWKQLDELLELGFIRPRTSPWRARVLFVLKKDGTMRMCIDYRKLNQVTIKNKYPLPRIDD 3160
            + +Q+D+LL+ G+IRP +SPW A V+FV KKD T RMC+DYR LN VTIKNKYPLPRIDD
Sbjct: 774  VKRQVDDLLQKGYIRPSSSPWGAPVIFVEKKDHTQRMCVDYRALNDVTIKNKYPLPRIDD 833

Query: 3159 LFDQLKGAMCFTKIDLRMGYHQMRIREEDILKTTFGTCYGHYEFLVMPFGLKNAHAAFMD 2980
            LFDQLKGA  F+KIDLR GYHQ+RI+EEDI KT F T YG +E  VM FGL NA A FM+
Sbjct: 834  LFDQLKGATVFSKIDLRSGYHQLRIKEEDIPKTAFTTRYGLFECTVMSFGLTNAPAFFMN 893

Query: 2979 LMNRVFRPYINQFVVVFIDDVLIYSKSEEEHEKRLQIVLQTLREHKLYAKRSKCEFWISE 2800
            LMN+VF  Y+++FVVVFIDD+LIYSK++EEHE+ L++ L+ LREH+LYAK SKCEFW+SE
Sbjct: 894  LMNKVFMEYLDKFVVVFIDDILIYSKTKEEHEEHLRLALEKLREHQLYAKFSKCEFWLSE 953

Query: 2799 VLFLGHVISDQGIVVDPEKIAAVVEWKLQKNVFEV*SFLGL 2677
            V FLGHVIS  G+ VDP  + +V  WK  K V E+ SFLGL
Sbjct: 954  VKFLGHVISAGGVAVDPSNVESVTNWKQPKTVSEIRSFLGL 994



 Score =  322 bits (825), Expect(3) = 0.0
 Identities = 159/321 (49%), Positives = 230/321 (71%), Gaps = 5/321 (1%)
 Frame = -2

Query: 2689 FLGIGGYYRRFVENFSRLAVPLTHLTKKGVKFE*TDKCERAFEKLKHRLISAPILTTPEP 2510
            FLG+ GYYR+F+ENFS++A P+T L +K VK++ +++CE++F++LK+RLISAPIL  P+P
Sbjct: 991  FLGLAGYYRKFIENFSKIAKPMTRLFQKDVKYKWSEECEQSFQELKNRLISAPILILPDP 1050

Query: 2509 RLGYEVYCDASGIGLGGVLMQKGKVIAYASR*LKTYEKNYTTYDLELAAVVFVLKLWRHY 2330
            + G++VYCDAS +GLG VLMQ GKV+AYASR L+ +EKNY T+DLELAAVV  LK+WRHY
Sbjct: 1051 KKGFQVYCDASKLGLGCVLMQDGKVVAYASRQLRPHEKNYPTHDLELAAVVHALKIWRHY 1110

Query: 2329 LYGENFFVFYDHKSLKYMFIQKDLNMRQIRWFELLKDYEFTLNYHPGKGNVVADALSRKE 2150
            L+G    V+ DHKSLKY+F Q DLNMRQ RW EL+KDY+  ++YHPGK NVVADALSRK 
Sbjct: 1111 LFGTRTEVYTDHKSLKYIFTQPDLNMRQRRWLELIKDYDMGIHYHPGKANVVADALSRKG 1170

Query: 2149 Y-----GSIASLRMIEDVRNLDLVVDFDDEKAFLYHLAVIPEIVKKVIKAQSTDISLQQV 1985
            Y     G    L + ++   L+L +       F+  L   P ++ +V +AQ+ D  +Q++
Sbjct: 1171 YCNATEGRQLPLELCKEFERLNLGI---VSIGFVAALEAKPTLIDQVREAQTNDPDIQEI 1227

Query: 1984 RGKLSMGEAPVNWSLETNGGIYFKGRLCVPDDEYL*KEILTMAHESVLTLHPGSTKMNYD 1805
            +  +  G+A + +  + +G ++   R+CVPD++ L   IL  AH+++ ++HPGSTKM  D
Sbjct: 1228 KKNMRRGKA-IGFLEDEHGTVWLGERICVPDNKDLKDAILKEAHDTLYSIHPGSTKMYQD 1286

Query: 1804 LRCQFWWRGMMKDIALFVSRC 1742
            L+ +FWW  M ++IA +V+ C
Sbjct: 1287 LKERFWWASMKREIAEYVAVC 1307


>gb|AAM14695.1|AC097446_24 Putative polyprotein [Oryza sativa Japonica Group]
          Length = 1680

 Score =  408 bits (1049), Expect(3) = 0.0
 Identities = 195/370 (52%), Positives = 262/370 (70%)
 Frame = -1

Query: 1736 CQQVKAEHQRPAGPLQPLPIAE*KWDSIAMDFVRGLPKGQQGRDSVWVIIDRLTKSAHFL 1557
            CQ+VKAEHQ+PAG LQPL I E KW+ I MDF+ GLPK   G DS+WVI+DRLTK AHF+
Sbjct: 1295 CQRVKAEHQKPAGLLQPLKIPEWKWEEIGMDFITGLPKTSLGHDSIWVIVDRLTKVAHFI 1354

Query: 1556 PVRQADNITTLSNLYIREIVKLHGMPMSIVSDRDPLFTSKFWGRFQLSMGSTLSMSSVFH 1377
            PV+   + + L+ LY+  IV LHG+P  IVSDR   FTS FW + Q  MGS L+ S+ +H
Sbjct: 1355 PVKTTYSGSRLAELYMARIVCLHGVPKKIVSDRGSQFTSNFWKKLQEEMGSKLNFSTAYH 1414

Query: 1376 P*TYGQSERTIQVLEYMLRDCALEFKGNWSEQLPLVEFAYNNIY*SSIRMAPFEALYGRP 1197
            P T GQ+ER  Q+LE MLR CAL+F G+W + LP  EF+YNN Y +S++MAP+EALYGR 
Sbjct: 1415 PQTDGQTERVNQILEDMLRACALDFGGSWDKNLPYAEFSYNNSYQASLQMAPYEALYGRK 1474

Query: 1196 FRTPLCWAEVSDRSVMGPAVVKETTEKIKVIQDRLRTAQSRQKSYAGQRRRPLEFAVGDQ 1017
             RTPL W +  +R V G  +++E  EK+K+IQ+RLR AQSR KSYA  RRR L F  GD 
Sbjct: 1475 CRTPLLWDQTGERQVFGTDILREAEEKVKIIQERLRVAQSRHKSYADNRRRDLSFEEGDY 1534

Query: 1016 VFLKVSPRPGIKRFGKKSKLAPRYIGPFEILQRIGEVAYRLALPTSLADVHNVFHVSMLR 837
            V+L+V+P  G+ RF  K KL PR++GP++I+ R GEVAY+L LP SLA+VHNVFHVS L+
Sbjct: 1535 VYLRVTPLRGVHRFHTKGKLVPRFVGPYKIVSRRGEVAYQLELPQSLAEVHNVFHVSQLK 1594

Query: 836  KYHADPSHIIEWQDIQLNEYVTYEERPLRVVDSK*QVLRNKTIKLVKVIWQHHNSKEMTW 657
            K    P+     + I++ E +TY E+P+R++++  +  RN+ I+  KV W +H+ +E TW
Sbjct: 1595 KCLRVPTEEANLEQIEVQEDLTYVEKPIRILETNERRTRNRVIRFCKVQWSNHSEEESTW 1654

Query: 656  ELESEIRKKY 627
            E E E++  +
Sbjct: 1655 EREDELKSAH 1664



 Score =  376 bits (966), Expect(3) = 0.0
 Identities = 225/521 (43%), Positives = 304/521 (58%), Gaps = 6/521 (1%)
 Frame = -3

Query: 4221 YNCGQVGHFDRECPLXXXXXXXXXXXXXXXXXVCRPQNHPCTQNIGGRPQNQSRTVTLAF 4042
            +NCG  GH+  +CP                                 +P++  + V    
Sbjct: 520  FNCGDPGHYADKCP---------------------------------KPRHV-KVVPAQS 545

Query: 4041 QPRQPNVQGKLNYVA*GNGGEENTVIEGNFLIFSSRAKVLFDTGATYSFISLHLAAYLGL 3862
                P  + ++N+VA     +   VI G FL+ S  A VLFD+GAT+SF+S+  A   G+
Sbjct: 546  NSAVPASKARVNHVAAAEAQDAPDVILGTFLVNSVPATVLFDSGATHSFLSMSFAGNHGM 605

Query: 3861 NYDFLEFNLY---PLHLEVLLVSVRYVRIVI*PLETIEWPSTLYL*ECRNVTLL*A--WI 3697
              + L   L    P +  + L     VRI I   + + + + L L E +++ ++    W+
Sbjct: 606  EVEDLRCPLMVSTPSNQALSLQRSPSVRIEI---QGVPFLANLILLESKDLDVILGMDWL 662

Query: 3696 GCHRTRRYCIVLKRKFLF*Q*MRTVILFKGRGGRLILHHFHLRRDEMRQRNI*HI*RI*R 3517
              H+    C   K            +      GR++  H  L  + +R R          
Sbjct: 663  ARHKGVIDCANRK------------VTLTSNDGRVVTVHA-LSSEFLRSR---------- 699

Query: 3516 RRNKVT-KDARIV*EFPDVFPEAFPGLLPKREINFVIDVQSGTAPISLSPYRMAPK*MKD 3340
              N++T ++  IV  +PDVFP+  PG+ PKR+I F  D+  GT PI   PYRMA   + +
Sbjct: 700  -LNQITLEEIPIVRGYPDVFPDDLPGMPPKRDIEFRKDLVPGTTPIHKRPYRMAANELAE 758

Query: 3339 LWKQLDELLELGFIRPRTSPWRARVLFVLKKDGTMRMCIDYRKLNQVTIKNKYPLPRIDD 3160
            + +Q+D+LL+ G+IRP +SPW A V+FV KKD T RMC+DYR LN VTIKNKYPLPRIDD
Sbjct: 759  VKRQVDDLLQKGYIRPSSSPWGAPVIFVEKKDHTQRMCVDYRALNDVTIKNKYPLPRIDD 818

Query: 3159 LFDQLKGAMCFTKIDLRMGYHQMRIREEDILKTTFGTCYGHYEFLVMPFGLKNAHAAFMD 2980
            LFDQLKGA  F+KIDLR GYHQ+RI+EEDI KT F T YG +E  VM FGL NA A FM+
Sbjct: 819  LFDQLKGATVFSKIDLRSGYHQLRIKEEDIPKTAFTTRYGLFECTVMSFGLTNAPAFFMN 878

Query: 2979 LMNRVFRPYINQFVVVFIDDVLIYSKSEEEHEKRLQIVLQTLREHKLYAKRSKCEFWISE 2800
            LMN+VF  Y+++FVVVFIDD+LIYSK++EEHE+ L++ L+ LREH+LYAK SKCEFW+SE
Sbjct: 879  LMNKVFMEYLDKFVVVFIDDILIYSKTKEEHEEHLRLALEKLREHQLYAKFSKCEFWLSE 938

Query: 2799 VLFLGHVISDQGIVVDPEKIAAVVEWKLQKNVFEV*SFLGL 2677
            V FLGHVIS  G+ VDP  + +V  WK  K V E+ SFLGL
Sbjct: 939  VKFLGHVISAGGVAVDPSNVESVTNWKQPKTVSEIRSFLGL 979



 Score =  322 bits (825), Expect(3) = 0.0
 Identities = 159/321 (49%), Positives = 230/321 (71%), Gaps = 5/321 (1%)
 Frame = -2

Query: 2689 FLGIGGYYRRFVENFSRLAVPLTHLTKKGVKFE*TDKCERAFEKLKHRLISAPILTTPEP 2510
            FLG+ GYYR+F+ENFS++A P+T L +K VK++ +++CE++F++LK+RLISAPIL  P+P
Sbjct: 976  FLGLAGYYRKFIENFSKIAKPMTRLFQKDVKYKWSEECEQSFQELKNRLISAPILILPDP 1035

Query: 2509 RLGYEVYCDASGIGLGGVLMQKGKVIAYASR*LKTYEKNYTTYDLELAAVVFVLKLWRHY 2330
            + G++VYCDAS +GLG VLMQ GKV+AYASR L+ +EKNY T+DLELAAVV  LK+WRHY
Sbjct: 1036 KKGFQVYCDASKLGLGCVLMQDGKVVAYASRQLRPHEKNYPTHDLELAAVVHALKIWRHY 1095

Query: 2329 LYGENFFVFYDHKSLKYMFIQKDLNMRQIRWFELLKDYEFTLNYHPGKGNVVADALSRKE 2150
            L+G    V+ DHKSLKY+F Q DLNMRQ RW EL+KDY+  ++YHPGK NVVADALSRK 
Sbjct: 1096 LFGTRTEVYTDHKSLKYIFTQPDLNMRQRRWLELIKDYDMGIHYHPGKANVVADALSRKG 1155

Query: 2149 Y-----GSIASLRMIEDVRNLDLVVDFDDEKAFLYHLAVIPEIVKKVIKAQSTDISLQQV 1985
            Y     G    L + ++   L+L +       F+  L   P ++ +V +AQ+ D  +Q++
Sbjct: 1156 YCNATEGRQLPLELCKEFERLNLGI---VSIGFVAALEAKPTLIDQVREAQTNDPDIQEI 1212

Query: 1984 RGKLSMGEAPVNWSLETNGGIYFKGRLCVPDDEYL*KEILTMAHESVLTLHPGSTKMNYD 1805
            +  +  G+A + +  + +G ++   R+CVPD++ L   IL  AH+++ ++HPGSTKM  D
Sbjct: 1213 KKNMRRGKA-IGFLEDEHGTVWLGERICVPDNKDLKDAILKEAHDTLYSIHPGSTKMYQD 1271

Query: 1804 LRCQFWWRGMMKDIALFVSRC 1742
            L+ +FWW  M ++IA +V+ C
Sbjct: 1272 LKERFWWASMKREIAEYVAVC 1292


>emb|CAD39969.2| OSJNBa0072D08.2 [Oryza sativa Japonica Group]
          Length = 1712

 Score =  402 bits (1034), Expect(3) = 0.0
 Identities = 194/373 (52%), Positives = 261/373 (69%)
 Frame = -1

Query: 1736 CQQVKAEHQRPAGPLQPLPIAE*KWDSIAMDFVRGLPKGQQGRDSVWVIIDRLTKSAHFL 1557
            CQ+VKAEHQ+PAG LQPL I E KW+ I MDF+ GLP+   G DS+WVI+DRLTK AHF+
Sbjct: 1327 CQRVKAEHQKPAGLLQPLKIPEWKWEEIGMDFITGLPRTSSGHDSIWVIVDRLTKVAHFI 1386

Query: 1556 PVRQADNITTLSNLYIREIVKLHGMPMSIVSDRDPLFTSKFWGRFQLSMGSTLSMSSVFH 1377
            PV+   + + L+ LY+  IV LHG+P  IVSDR   FTS FW + Q  MGS L+ S+ +H
Sbjct: 1387 PVKTTYSGSRLAELYMARIVCLHGVPKKIVSDRGSQFTSNFWKKLQEEMGSKLNFSTAYH 1446

Query: 1376 P*TYGQSERTIQVLEYMLRDCALEFKGNWSEQLPLVEFAYNNIY*SSIRMAPFEALYGRP 1197
            P T GQ+E+  Q+LE MLR CAL+F G+W + LP  EF+YNN Y +S++MAP+EALYGR 
Sbjct: 1447 PQTDGQTEKVNQILEDMLRACALDFGGSWDKNLPYAEFSYNNSYQASLQMAPYEALYGRK 1506

Query: 1196 FRTPLCWAEVSDRSVMGPAVVKETTEKIKVIQDRLRTAQSRQKSYAGQRRRPLEFAVGDQ 1017
             RTPL W +  +R V G  +++E  EK+K+IQ+RLR AQSR KSYA   RR L F  GD 
Sbjct: 1507 CRTPLLWDQTGERQVFGTDILREAEEKVKIIQERLRVAQSRHKSYAYNCRRDLSFEEGDY 1566

Query: 1016 VFLKVSPRPGIKRFGKKSKLAPRYIGPFEILQRIGEVAYRLALPTSLADVHNVFHVSMLR 837
            V+L+V+P  G+ RF  K KLAPR++GP++I+ R GEVAY+L LP SLA VHNVFHVS L+
Sbjct: 1567 VYLRVTPLRGVHRFHTKGKLAPRFVGPYKIVSRRGEVAYQLELPQSLAGVHNVFHVSQLK 1626

Query: 836  KYHADPSHIIEWQDIQLNEYVTYEERPLRVVDSK*QVLRNKTIKLVKVIWQHHNSKEMTW 657
            K    P+     + I++ E +TY E+P+R+++   +  RN+ I+  KV W +H+ +E TW
Sbjct: 1627 KCLRVPTEEANLEQIEVQEDLTYVEKPIRILEIDERRTRNRVIRFCKVQWSNHSEEESTW 1686

Query: 656  ELESEIRKKYQDL 618
            E E E++  +  L
Sbjct: 1687 EREEELKSAHPHL 1699



 Score =  380 bits (977), Expect(3) = 0.0
 Identities = 217/457 (47%), Positives = 290/457 (63%), Gaps = 6/457 (1%)
 Frame = -3

Query: 4029 PNVQGKLNYVA*GNGGEENTVIEGNFLIFSSRAKVLFDTGATYSFISLHLAAYLGLNYDF 3850
            P  + ++N+VA     +   VI G FL+ S  A VLFD+GAT+SF+S+  A   G+  + 
Sbjct: 582  PASKARVNHVAAAEAQDAQDVILGTFLVNSVPATVLFDSGATHSFLSMSFAGNHGMEVED 641

Query: 3849 LEFNLY---PLHLEVLLVSVRYVRIVI*PLETIEWPSTLYL*ECRNVTLL*A--WIGCHR 3685
            L   L    P +  + L     VRI I   + + + + L L E +++ ++    W+  H+
Sbjct: 642  LRRPLMVSTPSNQALSLQRSPSVRIEI---QGVPFLANLILLESKDLDVILGMDWLARHK 698

Query: 3684 TRRYCIVLKRKFLF*Q*MRTVILFKGRGGRLILHHFHLRRDEMRQRNI*HI*RI*RRRNK 3505
                C   K            +      GR++  H  L  + +R R            N+
Sbjct: 699  GVIDCANRK------------VTLTSNDGRVVTVHA-LSSESLRSR-----------LNQ 734

Query: 3504 VT-KDARIV*EFPDVFPEAFPGLLPKREINFVIDVQSGTAPISLSPYRMAPK*MKDLWKQ 3328
            +T ++  IV E+PDVFP+  PG+ PKR+I F ID+  GT PI   PYRMA   + ++ +Q
Sbjct: 735  ITLEEIPIVREYPDVFPDDLPGMPPKRDIEFRIDLVPGTTPIHKRPYRMAANELAEVKRQ 794

Query: 3327 LDELLELGFIRPRTSPWRARVLFVLKKDGTMRMCIDYRKLNQVTIKNKYPLPRIDDLFDQ 3148
            +D+LL+ G+IRP +SPW A V+FV KKD T RMC+DYR LN VTIKNKYPLPRIDDLFDQ
Sbjct: 795  VDDLLQKGYIRPISSPWGAPVIFVEKKDHTQRMCVDYRALNDVTIKNKYPLPRIDDLFDQ 854

Query: 3147 LKGAMCFTKIDLRMGYHQMRIREEDILKTTFGTCYGHYEFLVMPFGLKNAHAAFMDLMNR 2968
            LKGA  F+KIDLR GYHQ+RI+EEDI KT F T YG +E  VM FGL NA A FM+LMN+
Sbjct: 855  LKGATVFSKIDLRSGYHQLRIKEEDIPKTAFTTRYGLFECTVMSFGLTNAPAFFMNLMNK 914

Query: 2967 VFRPYINQFVVVFIDDVLIYSKSEEEHEKRLQIVLQTLREHKLYAKRSKCEFWISEVLFL 2788
            VF  Y+++FVVVFIDD+LIYS+++EEHE+ L++ L+ LREH+LYAK SKCEFW+SEV FL
Sbjct: 915  VFMEYLDKFVVVFIDDILIYSRTKEEHEEHLRLALEKLREHQLYAKFSKCEFWLSEVKFL 974

Query: 2787 GHVISDQGIVVDPEKIAAVVEWKLQKNVFEV*SFLGL 2677
            GHVIS  G+ VDP  + +V  WK  K V E+ SFLGL
Sbjct: 975  GHVISAGGVAVDPSNVESVTNWKQPKTVSEIRSFLGL 1011



 Score =  322 bits (825), Expect(3) = 0.0
 Identities = 159/321 (49%), Positives = 229/321 (71%), Gaps = 5/321 (1%)
 Frame = -2

Query: 2689 FLGIGGYYRRFVENFSRLAVPLTHLTKKGVKFE*TDKCERAFEKLKHRLISAPILTTPEP 2510
            FLG+ GYYRRF+ENFS++A P+T L +K VK++ +++C+++F++LK+RLISAPIL  P+P
Sbjct: 1008 FLGLAGYYRRFIENFSKIAKPMTQLLQKDVKYKWSEECKQSFQELKNRLISAPILILPDP 1067

Query: 2509 RLGYEVYCDASGIGLGGVLMQKGKVIAYASR*LKTYEKNYTTYDLELAAVVFVLKLWRHY 2330
            + G++VYCDAS +GLG VLMQ GKV+AYASR L+ +EKNY T+DLELAAVV  LK+WRHY
Sbjct: 1068 KKGFQVYCDASKLGLGCVLMQDGKVVAYASRQLRPHEKNYPTHDLELAAVVHALKIWRHY 1127

Query: 2329 LYGENFFVFYDHKSLKYMFIQKDLNMRQIRWFELLKDYEFTLNYHPGKGNVVADALSRKE 2150
            L+G    V+ DHKSLKY+F Q DLNMRQ RW EL+KDY+  ++YHPGK NVVADALSRK 
Sbjct: 1128 LFGTRTEVYTDHKSLKYIFTQPDLNMRQRRWLELIKDYDMGIHYHPGKANVVADALSRKG 1187

Query: 2149 Y-----GSIASLRMIEDVRNLDLVVDFDDEKAFLYHLAVIPEIVKKVIKAQSTDISLQQV 1985
            Y     G    L + ++   L+L +     + F+  L   P ++ +V +AQ  D  +Q++
Sbjct: 1188 YCNTTEGRQLPLELCKEFERLNLGI---VSRGFVAALEAKPTLIDQVREAQINDPDIQEI 1244

Query: 1984 RGKLSMGEAPVNWSLETNGGIYFKGRLCVPDDEYL*KEILTMAHESVLTLHPGSTKMNYD 1805
            +  +  G+A + +  +  G ++   R+CVPD++ L   IL  AH+++ ++HPGSTKM  D
Sbjct: 1245 KKNMRRGKA-IGFLEDEQGTVWLGERICVPDNKDLNDAILKEAHDTLYSIHPGSTKMYKD 1303

Query: 1804 LRCQFWWRGMMKDIALFVSRC 1742
            L+ +FWW  M ++IA +V+ C
Sbjct: 1304 LKERFWWASMKREIAEYVAVC 1324