BLASTX nr result

ID: Papaver30_contig00004921 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver30_contig00004921
         (750 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_010256062.1| PREDICTED: pre-rRNA-processing protein TSR2 ...    54   1e-07
ref|XP_010256068.1| PREDICTED: pre-rRNA-processing protein TSR2 ...    54   1e-07
ref|XP_010272871.1| PREDICTED: pre-rRNA-processing protein TSR2-...    49   2e-06

>ref|XP_010256062.1| PREDICTED: pre-rRNA-processing protein TSR2 isoform X1 [Nelumbo
           nucifera] gi|720000559|ref|XP_010256063.1| PREDICTED:
           pre-rRNA-processing protein TSR2 isoform X1 [Nelumbo
           nucifera] gi|720000562|ref|XP_010256065.1| PREDICTED:
           pre-rRNA-processing protein TSR2 isoform X1 [Nelumbo
           nucifera] gi|720000565|ref|XP_010256066.1| PREDICTED:
           pre-rRNA-processing protein TSR2 isoform X1 [Nelumbo
           nucifera] gi|720000568|ref|XP_010256067.1| PREDICTED:
           pre-rRNA-processing protein TSR2 isoform X1 [Nelumbo
           nucifera]
          Length = 200

 Score = 53.5 bits (127), Expect(2) = 1e-07
 Identities = 33/100 (33%), Positives = 57/100 (57%)
 Frame = -2

Query: 617 GKYKHSRVEKIAADMLDFFILQKEPHDVKSVRSRVIELVRIYFRYGIGLMQGIYEVGEKL 438
           G+  H + E++AA++  +F   KEPH +  + + + E + + F   I     I EV EKL
Sbjct: 45  GRDSHQKSEQLAANIYSWFSQSKEPHYIDDLENMLDESMVLSFNTEIE-DGSIEEVAEKL 103

Query: 437 YNLYQEILQGKYDSIEELRKTASWFGEDYMHKLRTAAEEE 318
             ++++ LQG Y SIE+LRK+ S  G++ + + R    E+
Sbjct: 104 MVMHEDCLQGNYGSIEKLRKSNS--GKEAISQSRRVINED 141



 Score = 30.4 bits (67), Expect(2) = 1e-07
 Identities = 13/27 (48%), Positives = 20/27 (74%)
 Frame = -1

Query: 750 LALESISLFSKGISLILYRWLRLQVFV 670
           L+ E++S  ++GISL+L RW  LQV +
Sbjct: 13  LSPEALSFLAEGISLVLSRWTALQVAI 39


>ref|XP_010256068.1| PREDICTED: pre-rRNA-processing protein TSR2 isoform X2 [Nelumbo
           nucifera]
          Length = 161

 Score = 53.5 bits (127), Expect(2) = 1e-07
 Identities = 33/102 (32%), Positives = 58/102 (56%)
 Frame = -2

Query: 617 GKYKHSRVEKIAADMLDFFILQKEPHDVKSVRSRVIELVRIYFRYGIGLMQGIYEVGEKL 438
           G+  H + E++AA++  +F   KEPH +  + + + E + + F   I     I EV EKL
Sbjct: 45  GRDSHQKSEQLAANIYSWFSQSKEPHYIDDLENMLDESMVLSFNTEIE-DGSIEEVAEKL 103

Query: 437 YNLYQEILQGKYDSIEELRKTASWFGEDYMHKLRTAAEEELI 312
             ++++ LQG Y SIE+LRK+ S  G++ + + R    + L+
Sbjct: 104 MVMHEDCLQGNYGSIEKLRKSNS--GKEAISQSRRVINKNLL 143



 Score = 30.4 bits (67), Expect(2) = 1e-07
 Identities = 13/27 (48%), Positives = 20/27 (74%)
 Frame = -1

Query: 750 LALESISLFSKGISLILYRWLRLQVFV 670
           L+ E++S  ++GISL+L RW  LQV +
Sbjct: 13  LSPEALSFLAEGISLVLSRWTALQVAI 39


>ref|XP_010272871.1| PREDICTED: pre-rRNA-processing protein TSR2-like [Nelumbo nucifera]
           gi|720053884|ref|XP_010272872.1| PREDICTED:
           pre-rRNA-processing protein TSR2-like [Nelumbo nucifera]
          Length = 204

 Score = 49.3 bits (116), Expect(2) = 2e-06
 Identities = 31/101 (30%), Positives = 56/101 (55%), Gaps = 1/101 (0%)
 Frame = -2

Query: 617 GKYKHSRVEKIAADMLDFFILQKEPHDVKSVRSRVIELVRIYFRYGIGLMQG-IYEVGEK 441
           G+    + E++A  +  +F   KEPH +  + + + E   + F +   +  G I EV EK
Sbjct: 45  GRDSCQKSEQLALSIFSWFSQSKEPHYIDDLENMLDE--SMVFSFNTEIEDGSIEEVAEK 102

Query: 440 LYNLYQEILQGKYDSIEELRKTASWFGEDYMHKLRTAAEEE 318
           L  ++++ LQG Y+SIE+LRK+ S  G++ + + R    E+
Sbjct: 103 LMIMHEDCLQGNYESIEKLRKSNS--GKEAISQSRKVINED 141



 Score = 30.4 bits (67), Expect(2) = 2e-06
 Identities = 13/27 (48%), Positives = 20/27 (74%)
 Frame = -1

Query: 750 LALESISLFSKGISLILYRWLRLQVFV 670
           L+ E++S  ++GISL+L RW  LQV +
Sbjct: 13  LSPEALSFLAEGISLVLSRWTALQVAI 39


Top