BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver30_contig00004336
         (1886 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_010275998.1| PREDICTED: uncharacterized protein LOC104610...   474   e-130
ref|XP_010267732.1| PREDICTED: uncharacterized protein LOC104604...   419   e-114
ref|XP_010267731.1| PREDICTED: uncharacterized protein LOC104604...   419   e-114
emb|CBI23183.3| unnamed protein product [Vitis vinifera]              414   e-112
ref|XP_010655357.1| PREDICTED: polyadenylation and cleavage fact...   395   e-107
ref|XP_012091393.1| PREDICTED: polyadenylation and cleavage fact...   367   2e-98
ref|XP_008808980.1| PREDICTED: uncharacterized protein LOC103720...   366   4e-98
ref|XP_010931816.1| PREDICTED: polyadenylation and cleavage fact...   361   1e-96
gb|KDO75520.1| hypothetical protein CISIN_1g003277mg [Citrus sin...   361   1e-96
ref|XP_002304927.2| pre-mRNA cleavage complex-related family pro...   358   7e-96
ref|XP_006383938.1| hypothetical protein POPTR_0004s01970g [Popu...   358   7e-96
ref|XP_007026008.1| PCF11P-similar protein 4, putative isoform 1...   358   9e-96
ref|XP_010909642.1| PREDICTED: polyadenylation and cleavage fact...   356   4e-95
ref|XP_002316604.2| pre-mRNA cleavage complex-related family pro...   350   3e-93
ref|XP_011037706.1| PREDICTED: polyadenylation and cleavage fact...   348   7e-93
ref|XP_008784554.1| PREDICTED: LOW QUALITY PROTEIN: uncharacteri...   348   1e-92
ref|XP_012450329.1| PREDICTED: polyadenylation and cleavage fact...   345   1e-91
gb|KJB67158.1| hypothetical protein B456_010G178200 [Gossypium r...   345   1e-91
gb|KJB67157.1| hypothetical protein B456_010G178200 [Gossypium r...   345   1e-91
ref|XP_012450328.1| PREDICTED: polyadenylation and cleavage fact...   345   1e-91

>ref|XP_010275998.1| PREDICTED: uncharacterized protein LOC104610875 isoform X1 [Nelumbo
            nucifera]
          Length = 1071

 Score =  474 bits (1220), Expect = e-130
 Identities = 269/532 (50%), Positives = 339/532 (63%), Gaps = 53/532 (9%)
 Frame = +1

Query: 49   DEDDYSPLSVDDIVRVYDIVLSDLTFNSKPIITDLTIIAGEQRDCAEGIAEVICNRIAEA 228
            D+DD  P S ++IVR+Y++VLS+LTFNSKPIIT+LTIIAGEQR+  EGIA+ IC RI E 
Sbjct: 68   DDDDVPPPSTEEIVRLYEVVLSELTFNSKPIITELTIIAGEQREHGEGIADAICARIIEV 127

Query: 229  PVDQKLPSLYLLDSIVKNIGSAYVRHFSSRLHEVFFAAYNQVHPNQHPAMRHLFGTWSAV 408
            PV+QKLPSLYLLDSIVKNIG  Y R+F+SRL EVF  AY QV PN +PAMRHLFGTWS V
Sbjct: 128  PVEQKLPSLYLLDSIVKNIGREYARYFASRLPEVFCEAYRQVQPNLYPAMRHLFGTWSTV 187

Query: 409  FPPPVLRRIGAELQLSTPTNHQPTGSLALTSS-GSMSPRPAHGIHVNPKYLEARRQFEHA 585
            FP  VLR+I  ELQ S  +N Q T   A  SS  S  PRP+HGIHVNPKYLE RRQ EH+
Sbjct: 188  FPTKVLRKIEVELQFSPASNQQSTSLTAPRSSEESPPPRPSHGIHVNPKYLE-RRQIEHS 246

Query: 586  T--ADVQRGTGVSSSLQMFGKKPDFSYGDKYDVGDTEIVNPH------------VRVGKV 723
            +   D+Q+G G SSSLQ++G+KP   Y + +D+   E ++PH            +R   V
Sbjct: 247  SFANDIQQGRGSSSSLQIYGRKPASGYVE-FDLDHDEGISPHFGVQGLDSQGAAIRASSV 305

Query: 724  GPP------------GTKSSKFQVQSLSPSNNGFGTDKSPER----AAPSHLRFEYAPSR 855
            G               +  ++   +SL P+N+GF  + SP R    A+PSH   EY P +
Sbjct: 306  GAAERLLPTKARLARSSSPARIGARSLPPTNDGFAINNSPRRVVEGASPSHSGSEYGPGK 365

Query: 856  VSGRDGERNDWWSK----------HGSDLDDQQRPRALIDAYGNYRGKNTLN-----VER 990
             +  DGE+++WW K          + S+  DQQRPRALIDAYGNYRGKNTLN     VER
Sbjct: 366  ATDGDGEKSEWWFKCQQMETSGTYNPSNGCDQQRPRALIDAYGNYRGKNTLNGKPLKVER 425

Query: 991  LEVNNFSSEASTRKWQNTEEEEYVWEDMSPTLADR-RSGESMPFNPTYGSLQTRVPLGRS 1167
            L++N  +S+  +++WQNTEEEEYVWEDMSPTL DR R  + MPFNP  GSL  R  L R 
Sbjct: 426  LDINGINSKEVSKRWQNTEEEEYVWEDMSPTLTDRSRGNDLMPFNPPLGSLSRRTGLERP 485

Query: 1168 TVGPPEPDLRRSNWPNQPLRPVVDDSAITAEDGISVLGPGRGSSSNQVVGGPQAQNVASQ 1347
            +    E D RR NWPNQ     +DD+A  + DG+S+LG G  +  N  +  PQ QN +S 
Sbjct: 486  STAILESDFRRGNWPNQVQLSTMDDAAFISGDGVSILGSGHVTMGNNSLRCPQTQNESSH 545

Query: 1348 IPGPSYS---SNLHGQFPQSF-PHINREASGRAGQMSFPP--TAPPAGQRLP 1485
            +    +S    N   QFPQS   H++ +A GRA QMSFP     P A +++P
Sbjct: 546  VQSSHHSQEPQNFPHQFPQSSQEHLDLKARGRAVQMSFPAAGVVPSAIKKMP 597



 Score = 62.4 bits (150), Expect = 1e-06
 Identities = 44/125 (35%), Positives = 54/125 (43%), Gaps = 3/125 (2%)
 Frame = +1

Query: 1519 EPGHLQPHMFKPLEAGEGFTSLVPAQMSSHVGAQPLNHGHTPQGHNPLLSLPFLNHNP-- 1692
            +  HL         A E F     AQMS+H   QPLNHGH PQGH  + S    N  P  
Sbjct: 738  QASHLPAQPLMSQNAQENFVPSAVAQMSTHKMEQPLNHGHIPQGHLSVTSSILPNPIPGL 797

Query: 1693 -FSSPPIRNMQNNNSFQSHGGGTVXXXXXXXXXXXXXXXXXQNIGPGASYAPGNSGYTGL 1869
              SS  I  + +N  F   G                     QN+GP A++A   S ++GL
Sbjct: 798  ASSSVTIHGL-SNTPFHLPGRALPPLPPGPPPVSSQIEPISQNVGPIATHASSGSAFSGL 856

Query: 1870 ISSLM 1884
            ISSLM
Sbjct: 857  ISSLM 861


>ref|XP_010267732.1| PREDICTED: uncharacterized protein LOC104604863 isoform X2 [Nelumbo
            nucifera]
          Length = 1049

 Score =  419 bits (1077), Expect = e-114
 Identities = 258/562 (45%), Positives = 333/562 (59%), Gaps = 47/562 (8%)
 Frame = +1

Query: 40   VSDDEDDYSPLSVDDIVRVYDIVLSDLTFNSKPIITDLTIIAGEQRDCAEGIAEVICNRI 219
            VS+D D  +P S ++ VR+Y++VLS+LTFNSKPIIT+LTIIAGEQR+  EGIA  IC  I
Sbjct: 67   VSEDNDVRAP-STEETVRLYEVVLSELTFNSKPIITELTIIAGEQREHGEGIAGAICAHI 125

Query: 220  AEAPVDQKLPSLYLLDSIVKNIGSAYVRHFSSRLHEVFFAAYNQVHPNQHPAMRHLFGTW 399
             E PV+QKLPSLYLLDSIVKNIG  YV +FSSRL EVF  AY QVHPN  PAMRHLFGTW
Sbjct: 126  IEVPVEQKLPSLYLLDSIVKNIGREYVMYFSSRLPEVFCEAYRQVHPNLCPAMRHLFGTW 185

Query: 400  SAVFPPPVLRRIGAELQLSTPTNHQPTGSLALTSS-GSMSPRPAHGIHVNPKYLEARRQF 576
            SA+FP  VLR I  ELQ S    +Q +G  A+ SS  S SPR +HGIHVNPKYLE     
Sbjct: 186  SAIFPAKVLRTIEIELQFSPRAKNQSSGLKAVRSSEDSPSPRSSHGIHVNPKYLE----- 240

Query: 577  EHATADVQRGTGVSSSLQMFGKKPDFSYGDKYDVGDTEIVNPHVRVGKVGPPGTKS---- 744
                 +VQRG G+SSSLQ++G+KP   YG+ +D    E+++P V V ++   G  +    
Sbjct: 241  -----EVQRGRGISSSLQIYGQKPTIEYGE-HDSDHGEVISPRVVVQRLDSQGASTHSSV 294

Query: 745  --------SKFQV-----------QSLSPSNNGFGTDKSP----ERAAPSHLRFEYAPSR 855
                    +K ++           +SLSPSN+GF  D SP    +R +PSH    Y P R
Sbjct: 295  GSAERLLPTKIRLTRPSSPTIGPARSLSPSNDGFSVDNSPRKVVDRVSPSHSGSIYGPRR 354

Query: 856  VSGRDGERNDWWSKHGSDLDDQQRPRAL-------IDAYGNYRGKNTLN-----VERLEV 999
            ++  DGER+  W KH     DQ+   +        IDA GN+ GKN LN     +++L+V
Sbjct: 355  MTDNDGERSYQWLKHWPSKKDQKVETSSMYNIFSNIDACGNFLGKNVLNEKHSIIKQLDV 414

Query: 1000 NNFSSEASTRKWQNTEEEEYVWEDMSPTLADRRSGESM-PFNPTYGSLQTRVPLGRSTVG 1176
            N   S+ +  +WQNTEEEEY+WEDMSPTLADR  G  + P N  + S+  R  LGR +  
Sbjct: 415  NGIKSKEAATRWQNTEEEEYIWEDMSPTLADRNRGNDIRPQNSPFSSISRRNGLGRPSAA 474

Query: 1177 PPEPDLRRSNWPNQPLRPVVDDSAITAEDGISVLGPGRGSSSNQVVGGPQAQNVASQIPG 1356
              EPD ++ NWP+Q    V DDSA  A D +S+LG G  S   + + GP  +N ++Q+  
Sbjct: 475  ILEPDFKKGNWPDQVHFSVPDDSAAFAGDVVSILGSGHFSMGKKPLSGPGIRNESTQVQC 534

Query: 1357 PSY---SSNLHGQFPQSF-PHINREASGRAGQMSFPPT--APPAGQRLPPFHDGNNIFPK 1518
              Y     N   +FPQ    H++ +A G A QM+FP +    PA Q +P   D    FP 
Sbjct: 535  SHYPHEPRNFLHRFPQPLQEHLDPKARGTAVQMTFPASRIVAPASQNVPSQIDK---FP- 590

Query: 1519 EPGHLQPHMFKPLEAGEGFTSL 1584
                +QP  F  +    G TSL
Sbjct: 591  -DADVQPPRFSRI-GSSGATSL 610


>ref|XP_010267731.1| PREDICTED: uncharacterized protein LOC104604863 isoform X1 [Nelumbo
            nucifera]
          Length = 1058

 Score =  419 bits (1077), Expect = e-114
 Identities = 258/562 (45%), Positives = 333/562 (59%), Gaps = 47/562 (8%)
 Frame = +1

Query: 40   VSDDEDDYSPLSVDDIVRVYDIVLSDLTFNSKPIITDLTIIAGEQRDCAEGIAEVICNRI 219
            VS+D D  +P S ++ VR+Y++VLS+LTFNSKPIIT+LTIIAGEQR+  EGIA  IC  I
Sbjct: 67   VSEDNDVRAP-STEETVRLYEVVLSELTFNSKPIITELTIIAGEQREHGEGIAGAICAHI 125

Query: 220  AEAPVDQKLPSLYLLDSIVKNIGSAYVRHFSSRLHEVFFAAYNQVHPNQHPAMRHLFGTW 399
             E PV+QKLPSLYLLDSIVKNIG  YV +FSSRL EVF  AY QVHPN  PAMRHLFGTW
Sbjct: 126  IEVPVEQKLPSLYLLDSIVKNIGREYVMYFSSRLPEVFCEAYRQVHPNLCPAMRHLFGTW 185

Query: 400  SAVFPPPVLRRIGAELQLSTPTNHQPTGSLALTSS-GSMSPRPAHGIHVNPKYLEARRQF 576
            SA+FP  VLR I  ELQ S    +Q +G  A+ SS  S SPR +HGIHVNPKYLE     
Sbjct: 186  SAIFPAKVLRTIEIELQFSPRAKNQSSGLKAVRSSEDSPSPRSSHGIHVNPKYLE----- 240

Query: 577  EHATADVQRGTGVSSSLQMFGKKPDFSYGDKYDVGDTEIVNPHVRVGKVGPPGTKS---- 744
                 +VQRG G+SSSLQ++G+KP   YG+ +D    E+++P V V ++   G  +    
Sbjct: 241  -----EVQRGRGISSSLQIYGQKPTIEYGE-HDSDHGEVISPRVVVQRLDSQGASTHSSV 294

Query: 745  --------SKFQV-----------QSLSPSNNGFGTDKSP----ERAAPSHLRFEYAPSR 855
                    +K ++           +SLSPSN+GF  D SP    +R +PSH    Y P R
Sbjct: 295  GSAERLLPTKIRLTRPSSPTIGPARSLSPSNDGFSVDNSPRKVVDRVSPSHSGSIYGPRR 354

Query: 856  VSGRDGERNDWWSKHGSDLDDQQRPRAL-------IDAYGNYRGKNTLN-----VERLEV 999
            ++  DGER+  W KH     DQ+   +        IDA GN+ GKN LN     +++L+V
Sbjct: 355  MTDNDGERSYQWLKHWPSKKDQKVETSSMYNIFSNIDACGNFLGKNVLNEKHSIIKQLDV 414

Query: 1000 NNFSSEASTRKWQNTEEEEYVWEDMSPTLADRRSGESM-PFNPTYGSLQTRVPLGRSTVG 1176
            N   S+ +  +WQNTEEEEY+WEDMSPTLADR  G  + P N  + S+  R  LGR +  
Sbjct: 415  NGIKSKEAATRWQNTEEEEYIWEDMSPTLADRNRGNDIRPQNSPFSSISRRNGLGRPSAA 474

Query: 1177 PPEPDLRRSNWPNQPLRPVVDDSAITAEDGISVLGPGRGSSSNQVVGGPQAQNVASQIPG 1356
              EPD ++ NWP+Q    V DDSA  A D +S+LG G  S   + + GP  +N ++Q+  
Sbjct: 475  ILEPDFKKGNWPDQVHFSVPDDSAAFAGDVVSILGSGHFSMGKKPLSGPGIRNESTQVQC 534

Query: 1357 PSY---SSNLHGQFPQSF-PHINREASGRAGQMSFPPT--APPAGQRLPPFHDGNNIFPK 1518
              Y     N   +FPQ    H++ +A G A QM+FP +    PA Q +P   D    FP 
Sbjct: 535  SHYPHEPRNFLHRFPQPLQEHLDPKARGTAVQMTFPASRIVAPASQNVPSQIDK---FP- 590

Query: 1519 EPGHLQPHMFKPLEAGEGFTSL 1584
                +QP  F  +    G TSL
Sbjct: 591  -DADVQPPRFSRI-GSSGATSL 610


>emb|CBI23183.3| unnamed protein product [Vitis vinifera]
          Length = 1003

 Score =  414 bits (1063), Expect = e-112
 Identities = 289/719 (40%), Positives = 364/719 (50%), Gaps = 109/719 (15%)
 Frame = +1

Query: 55   DDYSPLSVDDIVRVYDIVLSDLTFNSKPIITDLTIIAGEQRDCAEGIAEVICNRIAEAPV 234
            DD  P + ++IVR+Y+IVLS+L FNSKPIITDLTIIAG+ ++ A+GIA+ IC RI E  V
Sbjct: 109  DDVPPPTTEEIVRLYEIVLSELIFNSKPIITDLTIIAGDHKEHADGIADAICARIVEVSV 168

Query: 235  DQKLPSLYLLDSIVKNIGSAYVRHFSSRLHEVFFAAYNQVHPNQHPAMRHLFGTWSAVFP 414
            +QKLPSLYLLDSIVKNIG  Y++HFSSRL EVF  AY QVHPN + AMRHLFGTWSAVFP
Sbjct: 169  EQKLPSLYLLDSIVKNIGRDYIKHFSSRLPEVFCEAYRQVHPNLYTAMRHLFGTWSAVFP 228

Query: 415  PPVLRRIGAELQLSTPTNHQPTGSLALTSSGSMSPRPAHGIHVNPKYLEARRQFEHATAD 594
            P VLR+I A+LQ S   N+Q +G  +L +  S SPRP H IHVNPKYLEAR QFEH+  D
Sbjct: 229  PSVLRKIEAQLQFSPTLNNQSSGMASLRA--SESPRPTHSIHVNPKYLEARHQFEHSPVD 286

Query: 595  --VQRGTGVSSSLQMFGKKPDFSYGDKYDVGDTEIVNPHVRVGKVGPPGT---------- 738
              +Q   G SS+L+++G+KP   Y D+YD G TE+++   R  ++   G+          
Sbjct: 287  SNMQHSRGTSSTLKVYGQKPAIGY-DEYDSGHTEVISSQARAQRLNSTGSVGRTPFALGA 345

Query: 739  ------------KSSKFQV---QSLSPSNNGFGTDKSP----ERAAPSHLRFEYAPSRVS 861
                        KS+  ++    S SP    F  D SP    ERA+PSH  FEY   R  
Sbjct: 346  DKLLPSSTARVAKSTSPRIGTAGSSSPPAEKFSMDNSPRRVVERASPSHRGFEYGLVRSM 405

Query: 862  GRDGERNDWWSKHG-------------SDLDDQQRPRALIDAYGNYRGKNTLN-----VE 987
            GRD E +D   KH              S+  ++Q  RALIDAYGN RG+ TLN     V 
Sbjct: 406  GRDEETSDRQRKHWSNDRFETSAAHNLSNGRERQGLRALIDAYGNDRGQRTLNDKPPKVG 465

Query: 988  RLEVNNFSSEASTRKWQNTEEEEYVWEDMSPTLADRRSGESMPFNPT--YGSLQTRVPLG 1161
             L++N   ++   + WQNTEEEEY WEDM+PTLA+RR   ++  +    +GS +TR   G
Sbjct: 466  HLDMNGTDNKVPKKAWQNTEEEEYDWEDMNPTLANRRQCNNILQSSVSPFGSFRTRPGSG 525

Query: 1162 RSTVGPPEPDLRRSNWPNQPLRPVVDDSAITAEDGISVLGPGRGSSSNQVVGGPQAQNVA 1341
                 P E D  RS W  Q    +VDDS + AED +     GRGS S    G  + +   
Sbjct: 526  ALGAAPLESDFNRSKWSGQAQLSMVDDSPVIAEDVVPTTSLGRGSISKPGFGN-ETKFHG 584

Query: 1342 SQIPGPSYSSNLHGQFPQSFPHINREASGRAGQMSFP---------------------PT 1458
            S  P  S+  NL  + PQS  H NR A GR    + P                     P 
Sbjct: 585  SHYPQESW--NLVHRVPQSSQH-NRNAKGRGKNFNTPFLGSGISSSAAETISPLISNIPD 641

Query: 1459 APPAGQRLPPF-----------HDGNNIFPKEPGHLQPHM-------------------- 1545
            A    +RLP              +  ++F  E     P M                    
Sbjct: 642  ADAQLRRLPTVASRMGSSSLNSMNVESLFLPELDSKLPQMANRQAGSIPLNGKNQTQVTR 701

Query: 1546 ----FKPLEAGEGFTSLVPAQMSSHVGAQPLNHGHTPQGHNPLLSLPFLNHNP--FSSPP 1707
                F P E    F     A +SS+  A PLN G+TPQGH    S   LN  P   SS P
Sbjct: 702  LQPQFLPQETHGNFVPSTTAPVSSYSVAPPLNPGYTPQGHAAATSTILLNPVPGVHSSIP 761

Query: 1708 IRNMQNNNSFQSHGGGTVXXXXXXXXXXXXXXXXXQNIGPGASYAPGNSGYTGLISSLM 1884
            I N+ N++                            N GP  S     S  +GLISSLM
Sbjct: 762  IHNISNSS----------------------------NTGPIVSNQQPGSALSGLISSLM 792


>ref|XP_010655357.1| PREDICTED: polyadenylation and cleavage factor homolog 4 [Vitis
            vinifera]
          Length = 1046

 Score =  395 bits (1015), Expect = e-107
 Identities = 241/517 (46%), Positives = 305/517 (58%), Gaps = 51/517 (9%)
 Frame = +1

Query: 55   DDYSPLSVDDIVRVYDIVLSDLTFNSKPIITDLTIIAGEQRDCAEGIAEVICNRIAEAPV 234
            DD  P + ++IVR+Y+IVLS+L FNSKPIITDLTIIAG+ ++ A+GIA+ IC RI E  V
Sbjct: 69   DDVPPPTTEEIVRLYEIVLSELIFNSKPIITDLTIIAGDHKEHADGIADAICARIVEVSV 128

Query: 235  DQKLPSLYLLDSIVKNIGSAYVRHFSSRLHEVFFAAYNQVHPNQHPAMRHLFGTWSAVFP 414
            +QKLPSLYLLDSIVKNIG  Y++HFSSRL EVF  AY QVHPN + AMRHLFGTWSAVFP
Sbjct: 129  EQKLPSLYLLDSIVKNIGRDYIKHFSSRLPEVFCEAYRQVHPNLYTAMRHLFGTWSAVFP 188

Query: 415  PPVLRRIGAELQLSTPTNHQPTGSLALTSSGSMSPRPAHGIHVNPKYLEARRQFEHATAD 594
            P VLR+I A+LQ S   N+Q +G  +L +  S SPRP H IHVNPKYLEAR QFEH+  D
Sbjct: 189  PSVLRKIEAQLQFSPTLNNQSSGMASLRA--SESPRPTHSIHVNPKYLEARHQFEHSPVD 246

Query: 595  --VQRGTGVSSSLQMFGKKPDFSYGDKYDVGDTEIVNPHVRVGKVGPPGT---------- 738
              +Q   G SS+L+++G+KP   Y D+YD G TE+++   R  ++   G+          
Sbjct: 247  SNMQHSRGTSSTLKVYGQKPAIGY-DEYDSGHTEVISSQARAQRLNSTGSVGRTPFALGA 305

Query: 739  ------------KSSKFQV---QSLSPSNNGFGTDKSP----ERAAPSHLRFEYAPSRVS 861
                        KS+  ++    S SP    F  D SP    ERA+PSH  FEY   R  
Sbjct: 306  DKLLPSSTARVAKSTSPRIGTAGSSSPPAEKFSMDNSPRRVVERASPSHRGFEYGLVRSM 365

Query: 862  GRDGERNDWWSKHG-------------SDLDDQQRPRALIDAYGNYRGKNTLN-----VE 987
            GRD E +D   KH              S+  ++Q  RALIDAYGN RG+ TLN     V 
Sbjct: 366  GRDEETSDRQRKHWSNDRFETSAAHNLSNGRERQGLRALIDAYGNDRGQRTLNDKPPKVG 425

Query: 988  RLEVNNFSSEASTRKWQNTEEEEYVWEDMSPTLADRRSGESMPFNPT--YGSLQTRVPLG 1161
             L++N   ++   + WQNTEEEEY WEDM+PTLA+RR   ++  +    +GS +TR   G
Sbjct: 426  HLDMNGTDNKVPKKAWQNTEEEEYDWEDMNPTLANRRQCNNILQSSVSPFGSFRTRPGSG 485

Query: 1162 RSTVGPPEPDLRRSNWPNQPLRPVVDDSAITAEDGISVLGPGRGSSSNQVVGGPQAQNVA 1341
                 P E D  RS W  Q    +VDDS + AED +     GRGS S    G  + +   
Sbjct: 486  ALGAAPLESDFNRSKWSGQAQLSMVDDSPVIAEDVVPTTSLGRGSISKPGFGN-ETKFHG 544

Query: 1342 SQIPGPSYSSNLHGQFPQSFPHINREASGRAGQMSFP 1452
            S  P  S+  NL  + PQS  H NR A GR    + P
Sbjct: 545  SHYPQESW--NLVHRVPQSSQH-NRNAKGRGKNFNTP 578


>ref|XP_012091393.1| PREDICTED: polyadenylation and cleavage factor homolog 4 [Jatropha
            curcas] gi|643703717|gb|KDP20781.1| hypothetical protein
            JCGZ_21252 [Jatropha curcas]
          Length = 1029

 Score =  367 bits (943), Expect = 2e-98
 Identities = 262/632 (41%), Positives = 342/632 (54%), Gaps = 66/632 (10%)
 Frame = +1

Query: 43   SDDEDDYSP-LSVDDIVRVYDIVLSDLTFNSKPIITDLTIIAGEQRDCAEGIAEVICNRI 219
            ++D+D   P LS ++IV++Y++VL +LTFNSKPIITDLTIIAGE R+  EGIA+ IC RI
Sbjct: 52   AEDDDAAGPTLSAEEIVQLYELVLDELTFNSKPIITDLTIIAGELREQGEGIADAICARI 111

Query: 220  AEAPVDQKLPSLYLLDSIVKNIGSAYVRHFSSRLHEVFFAAYNQVHPNQHPAMRHLFGTW 399
             E PV+QKLPSLYLLDSIVKNIG  YVR+FS+RL EVF  AY QVHPN +P+MRHLFGTW
Sbjct: 112  IEVPVEQKLPSLYLLDSIVKNIGRDYVRYFSTRLPEVFCEAYRQVHPNLYPSMRHLFGTW 171

Query: 400  SAVFPPPVLRRIGAELQLSTPTNHQPTGSLALTSSGSMSPRPAHGIHVNPKYLEARRQFE 579
            S+VFPP VL +I  +LQ S   N Q +G  +L +S   SPRP HGIHVNPKYL   RQ E
Sbjct: 172  SSVFPPSVLGKIETQLQFSPQVNSQSSGLSSLKASD--SPRPTHGIHVNPKYL---RQLE 226

Query: 580  HATAD---VQRGTGVSSSLQMFGKKPDFSYGDKYDVGDTEIVNPHV---RVGKVGPPGT- 738
            ++T+D    Q   G SS+L+++G+KP  +Y D+YD    E+ +  V   R+  VG  GT 
Sbjct: 227  NSTSDNNAQQHVRGASSTLKVYGQKPAIAY-DEYDSDHAEVTSSQVGAQRLNTVGTVGTV 285

Query: 739  -------------KSSKFQVQSLSPSNNG-----------FGTDKSPER----AAPSHLR 834
                          SS  ++   +PS+ G           F    SP R    A+PSH  
Sbjct: 286  GHTSFMLGANKLYASSSSRLARHAPSSVGAERPLPSEVDDFAMGNSPRRFVEGASPSHPL 345

Query: 835  FEYAPSRVSGRDGERNDWWSKHGSD----------------LDDQQRPRALIDAYGNYR- 963
            F+Y PSR   RD E  DW  KH SD                  + Q PRALIDAYG  + 
Sbjct: 346  FDYGPSRPIARDEETTDWRRKHYSDDIQNRLETSVAYSLSNGHEHQGPRALIDAYGEDKR 405

Query: 964  ----GKNTLNVERLEVNNFSSEASTRKWQNTEEEEYVWEDMSPTLADR-RSGESMPFN-P 1125
                    L ++RL+V+   ++ + R WQNTEEEE+ WEDMSPTLADR RS + +  + P
Sbjct: 406  SRVSNSKPLQIDRLDVDGMVNKVAPRLWQNTEEEEFDWEDMSPTLADRNRSNDFLSSSVP 465

Query: 1126 TYGSLQTRVPLGRSTVGPPEPDLR-RSNWPNQPLRPVVDDSAITAEDGISVLGPGRGSSS 1302
             +G + TR   G  T GP + D   RSN   Q    ++DDS+  AED I +LG GRGS++
Sbjct: 466  PFGGVGTRPGFG--TRGPSQLDSDIRSNRSAQAQLSLIDDSSDIAEDSIPILGSGRGSTA 523

Query: 1303 NQVVGGPQA-QNVASQIPGPSYSSNLHGQFPQSFPHINREASGRAGQMSFPPT--APPAG 1473
                  P+  Q +AS  P  ++   L   +PQS   +N +   R  +M F  +  +    
Sbjct: 524  KLPGFQPERNQIMASHYPREAW--KLLNHYPQS-TDLNAKGRNREFRMPFSRSVISSSVS 580

Query: 1474 QRLPPFHDGNNIFPKEPGHLQPHMFKPLEAGEGFTSLVPAQMSSHVGAQPL---NHGHTP 1644
              L P  D     P   G        P   G   +S+ P    S  G  PL   +  H P
Sbjct: 581  DSLAPLVDK---LPDTDGQYVRPPTLPSRVG---SSIAP----STAGVWPLVNVHKSHPP 630

Query: 1645 QGHNPLLSLPFLNHNPFSSPPIRNMQNNNSFQ 1740
              H P+      + + F S   RN   N   Q
Sbjct: 631  PVH-PIFPPQKQSRSQFDSTNARNTVVNQGLQ 661


>ref|XP_008808980.1| PREDICTED: uncharacterized protein LOC103720837 isoform X1 [Phoenix
            dactylifera] gi|672177754|ref|XP_008808981.1| PREDICTED:
            uncharacterized protein LOC103720837 isoform X1 [Phoenix
            dactylifera] gi|672177756|ref|XP_008808982.1| PREDICTED:
            uncharacterized protein LOC103720837 isoform X1 [Phoenix
            dactylifera] gi|672177758|ref|XP_008808983.1| PREDICTED:
            uncharacterized protein LOC103720837 isoform X1 [Phoenix
            dactylifera]
          Length = 1065

 Score =  366 bits (939), Expect = 4e-98
 Identities = 229/547 (41%), Positives = 294/547 (53%), Gaps = 94/547 (17%)
 Frame = +1

Query: 67   PLSVDDIVRVYDIVLSDLTFNSKPIITDLTIIAGEQRDCAEGIAEVICNRIAEAPVDQKL 246
            P +  +IVR+Y  +LS+LTFNSKPIITDL+IIAG+    AEGIA  IC RI E PVDQKL
Sbjct: 72   PHTAGEIVRLYKELLSELTFNSKPIITDLSIIAGQHSQFAEGIANAICARILEVPVDQKL 131

Query: 247  PSLYLLDSIVKNIGSAYVRHFSSRLHEVFFAAYNQVHPNQHPAMRHLFGTWSAVFPPPVL 426
            PSLYLLDSIVKNIG  YVR+F++RL +VF  AYNQVHP Q+P+MRHLFGTW  VFP  VL
Sbjct: 132  PSLYLLDSIVKNIGRDYVRYFAARLPKVFCEAYNQVHPTQYPSMRHLFGTWFQVFPLSVL 191

Query: 427  RRIGAELQLSTPTNHQPTGSLALTSSGSMSPRPAHGIHVNPKYLEARRQFEHATA----- 591
            R+I  ELQ S   N Q +G  +   S S S RP+HGIHVNPKYLEAR+Q +H T      
Sbjct: 192  RKIEDELQFSPTENKQSSGMSSTRHSESPSSRPSHGIHVNPKYLEARQQLKHPTLMCAAD 251

Query: 592  ----------------------------------DVQRGTGVSSSLQMFGKKPDFSYGDK 669
                                              D++   GVSSSLQ++GKK      + 
Sbjct: 252  GHDKVHTTDFDGERMEGRASEGSKGWQGASPKFHDIEHVRGVSSSLQVYGKKSSMQCSE- 310

Query: 670  YDVGDTEIVNPHVRVGKVGPPGTKSS---------------KFQV------------QSL 768
            Y++   E++     V + G P T ++               K ++            +S+
Sbjct: 311  YNIDHPEVLPARPGVARTGSPQTAATCTASMVEVEGPTRQLKIKISRPSPPPIIGPRKSI 370

Query: 769  SPSNNGFGTDKSP----ERAAPSHLRFEYAPSRVSGRDGERNDWWSKHGSDLDD------ 918
            SP  + F  D SP    ERA+PSH  F Y P R + ++G     W +     DD      
Sbjct: 371  SPPVDRFSRDTSPRRMRERASPSHSGFVYGPGRGTSQNG-----WLERRRPFDDGAQQIQ 425

Query: 919  ------------QQRPRALIDAYGNYRGKN-----TLNVERLEVNNFSSEASTRKWQNTE 1047
                        +QR R LIDAYGNY GK+        V RL+VN+ +SE ++RKW+N+E
Sbjct: 426  ASMAFNLNNGYAKQRSRELIDAYGNYTGKSFSLEKLPKVPRLDVNSVASERASRKWKNSE 485

Query: 1048 EEEYVWEDMSPTLADRRSGESM-PFNPTYGSLQTRVPLGRSTVGPPEPDLRRSNWPNQPL 1224
            EEEYVWEDMSPTL+DR    S+ PF P+ GSL TR  L R      + D  R +WP Q  
Sbjct: 486  EEEYVWEDMSPTLSDRSRRNSLPPFGPSTGSLSTRAGLTRPDASLLDHDSGRRSWPGQAQ 545

Query: 1225 RPVVDDSAITAEDGISVLGPGRGSSSNQVVGGPQAQNVASQIPGPSYSSNLHGQFPQSFP 1404
             P V D A T ED I V GP  GS + + +    +QN       P Y  + H   P+  P
Sbjct: 546  LPAVGDPANTIEDRIPVFGPAHGSMNRKYLDSTVSQNDWL----PPYQGSHHTHEPRKLP 601

Query: 1405 HINREAS 1425
            ++  ++S
Sbjct: 602  YMFPKSS 608


>ref|XP_010931816.1| PREDICTED: polyadenylation and cleavage factor homolog 4 isoform X1
            [Elaeis guineensis] gi|743820578|ref|XP_010931817.1|
            PREDICTED: polyadenylation and cleavage factor homolog 4
            isoform X1 [Elaeis guineensis]
          Length = 1068

 Score =  361 bits (927), Expect = 1e-96
 Identities = 232/578 (40%), Positives = 308/578 (53%), Gaps = 96/578 (16%)
 Frame = +1

Query: 52   EDDYSPLSVDDIVRVYDIVLSDLTFNSKPIITDLTIIAGEQRDCAEGIAEVICNRIAEAP 231
            ED   P +  +IVR+Y+ +LS+LTFNSKPIIT+LTIIAG+    AEGIA+ IC R+ E P
Sbjct: 60   EDPPPPPTAGEIVRLYEELLSELTFNSKPIITELTIIAGQHPQLAEGIADAICARVLEVP 119

Query: 232  VDQKLPSLYLLDSIVKNIGSAYVRHFSSRLHEVFFAAYNQVHPNQHPAMRHLFGTWSAVF 411
            +DQKLPSLYLLDSIVKNIG  YVR+F++RL +VF  AYNQVHP+Q+PAMRHLFGTWS VF
Sbjct: 120  LDQKLPSLYLLDSIVKNIGREYVRYFAARLPKVFCEAYNQVHPSQYPAMRHLFGTWSQVF 179

Query: 412  PPPVLRRIGAELQLSTPTNHQPTGSLALTSSGSMSPRPAHGIHVNPKYLEARRQFEHATA 591
            P  VLR+I  ELQ S   N Q +G  ++  S S SPRP+HGIHVNPKYLEAR  F+H+T 
Sbjct: 180  PLSVLRKIEDELQFSPSKNSQSSGITSMRQSESPSPRPSHGIHVNPKYLEARHLFKHSTT 239

Query: 592  ---------------------------------------DVQRGTGVSSSLQMFGKKPDF 654
                                                   D++   GVSSSLQ++G+K   
Sbjct: 240  MRAVESHDKAHMTDFDGEQMEGNASEGLKGWSGGSPKFHDIEHARGVSSSLQVYGQKSSL 299

Query: 655  SYGDKYDVGDTEIVNPHVRVGKVGPPGT--------------------KSSKFQV----- 759
               ++YD+   E++     + + G P T                    K S+F       
Sbjct: 300  QC-NEYDIDHPEVLPSRRGIVRTGSPLTAATRATSIVEVEGPTRHSKSKFSRFSPPPIIG 358

Query: 760  --QSLSPSNNGFGTDKSP----ERAAPSHLRFEYAPSRVSGRDGERNDWW---------- 891
              +S+SP  + F    SP    +R +PSH        R + ++G     W          
Sbjct: 359  PRKSVSPPTDRFSRRTSPRRVLKRTSPSHSE----AGRGTNQNGRFERSWPCDDATEQVK 414

Query: 892  SKHGSDLDD---QQRPRALIDAYGNYRGKNTL-----NVERLEVNNFSSEASTRKWQNTE 1047
            S     L+    +Q  R LIDAYGN RGK+T       V+RL+VN  +SEA+TRKW+N+E
Sbjct: 415  SSMAFSLNSGYAKQHSRDLIDAYGNCRGKSTSLEKLPKVQRLDVNGIASEAATRKWKNSE 474

Query: 1048 EEEYVWEDMSPTLADRRSGESM-PFNPTYGSLQTRVPLGRSTVGPPEPDLRRSNWPNQPL 1224
            EEEYVWEDMSPTL+DR   +S  P  P+ G+L  R  L R      E D  R +WP Q  
Sbjct: 475  EEEYVWEDMSPTLSDRSRRKSQPPLGPSTGNLSIRGGLTRPDASLLEHDFGRHSWPGQAQ 534

Query: 1225 RPVVDDSAITAEDGISVLGPGRGSSSNQVVGGPQAQNVASQIPGPSYSSNLHGQFPQSFP 1404
             P +DD A T ED I   G   GS + + + G   Q+        S+ ++   + P  FP
Sbjct: 535  LPAIDDPAYTVEDRIHFFGNAHGSMNRKYLDGIVNQHKLLADSQGSHHTHEPRKLPYMFP 594

Query: 1405 HINREA-----SGRAGQMSFPPT--APPAGQRLPPFHD 1497
              ++++      GRA QM    +   P  G +LP  ++
Sbjct: 595  QSSQQSLSPRLRGRASQMPVAASGITPSIGNKLPNLYE 632


>gb|KDO75520.1| hypothetical protein CISIN_1g003277mg [Citrus sinensis]
          Length = 834

 Score =  361 bits (926), Expect = 1e-96
 Identities = 223/507 (43%), Positives = 296/507 (58%), Gaps = 40/507 (7%)
 Frame = +1

Query: 70   LSVDDIVRVYDIVLSDLTFNSKPIITDLTIIAGEQRDCAEGIAEVICNRIAEAPVDQKLP 249
            LS ++IV++Y+ VL++LTFNSKPIITDLTIIAGEQR   +GIAE IC RI EAPV+ KLP
Sbjct: 64   LSTNEIVQLYETVLAELTFNSKPIITDLTIIAGEQRAHGDGIAEAICTRILEAPVNHKLP 123

Query: 250  SLYLLDSIVKNIGSAYVRHFSSRLHEVFFAAYNQVHPNQHPAMRHLFGTWSAVFPPPVLR 429
            SLYLLDSIVKNI   YVR+FSSRL EVF  AY QVHP+ + AM+HLFGTWS VFP  VLR
Sbjct: 124  SLYLLDSIVKNINKEYVRYFSSRLPEVFCEAYRQVHPDLYSAMQHLFGTWSTVFPQAVLR 183

Query: 430  RIGAELQLSTPTNHQPTGSLALTSSGSMSPRPAHGIHVNPKYLEARRQFEHATAD--VQR 603
            +I AELQ S+  N Q +   +L +  S SPRP HGIHVNPKY+   RQFEH+  D  +Q+
Sbjct: 184  KIEAELQFSSQVNKQSSNVNSLRA--SESPRPTHGIHVNPKYI---RQFEHSNTDSNIQQ 238

Query: 604  GTGVSSSLQMFGKKPDFSYGDKYDVGDTEIVNPHVRVGKVGPPGT--------------- 738
              G SS+L+ +G+ P   Y D++D    E+ +  V   +  P G+               
Sbjct: 239  VKGTSSNLKEYGQNPAIGY-DEFDTNHLELTSSQVGGQRSNPAGSVGRATFALGANKLHP 297

Query: 739  KSSKFQVQSLSP-----SNNGFGTDKSPER---AAPSHLRFEYAPSRVSGRDGERNDW-- 888
             S+    +SLSP       + F  + SP R    +PSH  F+Y   R  GR+ E ++W  
Sbjct: 298  SSTSRLGRSLSPLAIGSEGDEFAVENSPRRLEGTSPSHPVFDYGIGRAIGRNEEVSEWRN 357

Query: 889  --------WSKHGSDLDDQQRPRALIDAYGNYR---GKNTLNVERLEVNNFSSEASTRKW 1035
                     S + S+  + Q PRALIDAYG+ R         V  + +N   ++ ++R W
Sbjct: 358  PNRFESTSTSYNLSNGHEHQGPRALIDAYGSDRRASNNKPPQVGHMGINGMGNKVASRSW 417

Query: 1036 QNTEEEEYVWEDMSPTLADR-RSGESMPFN-PTYGSLQTRVPLGRSTVGPPEPDLRRSNW 1209
            QNTEEEE+ WEDMSPTL DR R  + +P + P YGS   R    +      E D+ R+N 
Sbjct: 418  QNTEEEEFDWEDMSPTLLDRGRKNDFLPSSVPLYGSTGARPDFSKLNASSLESDV-RTNH 476

Query: 1210 PNQPLRPVVDDSAITAEDGISVLGPGRGSSSNQVVGGPQAQNVASQIPGPSYSSNLHGQF 1389
             +Q   P++DDS++TAED +S+LG GRG+           QN+ S+ P  S+  NL   F
Sbjct: 477  SSQAQLPLLDDSSVTAEDSVSLLGSGRGTGKVSGFQSEPNQNLGSRYPQESW--NLPHHF 534

Query: 1390 PQSFPHINREASGRAGQMSFPPTAPPA 1470
             +S    N    GR   + FP +  P+
Sbjct: 535  SRSSHPPNGRGRGRDSHIPFPGSGVPS 561


>ref|XP_002304927.2| pre-mRNA cleavage complex-related family protein [Populus
            trichocarpa] gi|550340120|gb|EEE85438.2| pre-mRNA
            cleavage complex-related family protein [Populus
            trichocarpa]
          Length = 841

 Score =  358 bits (920), Expect = 7e-96
 Identities = 250/617 (40%), Positives = 333/617 (53%), Gaps = 46/617 (7%)
 Frame = +1

Query: 46   DDEDDYSPLSVDDIVRVYDIVLSDLTFNSKPIITDLTIIAGEQRDCAEGIAEVICNRIAE 225
            D   D + L ++D+V +Y+ VL++LTFNSKPIITDLTIIAGEQR+  EGIA+V+C RI E
Sbjct: 58   DGGGDGASLRLEDVVEIYETVLNELTFNSKPIITDLTIIAGEQREHGEGIADVLCARIVE 117

Query: 226  APVDQKLPSLYLLDSIVKNIGSAYVRHFSSRLHEVFFAAYNQVHPNQHPAMRHLFGTWSA 405
            APVDQKLPSLYLLDSIVKNIG  Y+RHFSSRL EVF  AY QV P+ +P+MRHLFGTWS+
Sbjct: 118  APVDQKLPSLYLLDSIVKNIGREYIRHFSSRLPEVFCEAYRQVDPSLYPSMRHLFGTWSS 177

Query: 406  VFPPPVLRRIGAELQLSTPTNHQPTGSLALTS-SGSMSPRPAHGIHVNPKYLEARRQFEH 582
            VFP  VL +I  +L  S   N Q   S +LTS   S SPRP HGIHVNPKYL   RQ +H
Sbjct: 178  VFPSSVLHKIETQLHFSPQVNDQ---SSSLTSFRASESPRPPHGIHVNPKYL---RQLDH 231

Query: 583  ATADVQRGTGVSSSLQMFGKKPDFSYGDKYDVGDTEIVNPHVRVGKVGPPGTKSSKFQVQ 762
            +TAD     G SS+L+++GKKP   Y D+Y+    E ++  V VG+  P           
Sbjct: 232  STAD-NHAKGTSSNLKIYGKKPTVGY-DEYESDQAEAISSQVGVGRNSP----------- 278

Query: 763  SLSPSNNGFGTDKSPERAAPSHLRFEYAPSRVSGRDGERNDWWSKHGSDLD--------- 915
                        +  E  +PSH  F+Y  SR   RD E N+    + SD +         
Sbjct: 279  -----------RRFVEALSPSHPLFDYVHSRAIVRDEEANELRRNNYSDDNHNRFEPSAR 327

Query: 916  -------DQQRPRALIDAYGNYRGK-----NTLNVERLEVNNFSSEASTRKWQNTEEEEY 1059
                   + Q PRALIDAYG+ RGK       L++E+L VN   ++ ++R WQNTEEEE+
Sbjct: 328  YRLSNGLEHQGPRALIDAYGDDRGKRITSSKPLHIEQLAVNGVHNKVASRSWQNTEEEEF 387

Query: 1060 VWEDMSPTLADR-RSGESMPFN-PTYGSLQTRVPLGRSTVGPPEPDLR--RSNWPNQPLR 1227
             WEDMSPTL++R RS + +P + P +GS+  R   GR +    E D+R  RS W N P  
Sbjct: 388  DWEDMSPTLSERGRSNDFLPSSIPPFGSVVPRPAFGRLSAIHAESDIRSNRSTW-NFP-- 444

Query: 1228 PVVDDSAITAEDGISVLGPGR------GSSSNQVVGGPQAQNVASQIPGPSYSSNLHGQF 1389
            P +  SA      ++  G GR        S    +GG     +A ++P      N     
Sbjct: 445  PHIHQSAHL----LNSKGRGRDFQMPLSGSGVSSLGGENYSPLAEKLPDIDAQLNRPPAI 500

Query: 1390 PQSF-PHINREASGRAGQMSFPPTA---PPAGQR--LPPFHDGNN------IFPKEPGHL 1533
               +  +I+  +SG    ++ PP++   PP   R  LPP H   N      + P +P  L
Sbjct: 501  ASRWGSNIDSTSSGTWSSVA-PPSSGVWPPVNARKSLPPPHAALNQQNQAHVNPFQPQQL 559

Query: 1534 QPHMFKPLEAGEGFTSLVPAQMSSHVGAQPLNHGHTPQGHNPLLSLPFLNHNPFSS--PP 1707
              H  +      G TS+ P  +     A PLNHG+   GH+  +S+   N  P      P
Sbjct: 560  PSHEARENFHPSGVTSMPPRPL-----APPLNHGYNTHGHSTAISMVPSNALPAVQLPLP 614

Query: 1708 IRNMQNNNSFQSHGGGT 1758
            + N+ N +       G+
Sbjct: 615  VNNIPNISGVPGQPSGS 631


>ref|XP_006383938.1| hypothetical protein POPTR_0004s01970g [Populus trichocarpa]
            gi|550340119|gb|ERP61735.1| hypothetical protein
            POPTR_0004s01970g [Populus trichocarpa]
          Length = 852

 Score =  358 bits (920), Expect = 7e-96
 Identities = 250/617 (40%), Positives = 333/617 (53%), Gaps = 46/617 (7%)
 Frame = +1

Query: 46   DDEDDYSPLSVDDIVRVYDIVLSDLTFNSKPIITDLTIIAGEQRDCAEGIAEVICNRIAE 225
            D   D + L ++D+V +Y+ VL++LTFNSKPIITDLTIIAGEQR+  EGIA+V+C RI E
Sbjct: 58   DGGGDGASLRLEDVVEIYETVLNELTFNSKPIITDLTIIAGEQREHGEGIADVLCARIVE 117

Query: 226  APVDQKLPSLYLLDSIVKNIGSAYVRHFSSRLHEVFFAAYNQVHPNQHPAMRHLFGTWSA 405
            APVDQKLPSLYLLDSIVKNIG  Y+RHFSSRL EVF  AY QV P+ +P+MRHLFGTWS+
Sbjct: 118  APVDQKLPSLYLLDSIVKNIGREYIRHFSSRLPEVFCEAYRQVDPSLYPSMRHLFGTWSS 177

Query: 406  VFPPPVLRRIGAELQLSTPTNHQPTGSLALTS-SGSMSPRPAHGIHVNPKYLEARRQFEH 582
            VFP  VL +I  +L  S   N Q   S +LTS   S SPRP HGIHVNPKYL   RQ +H
Sbjct: 178  VFPSSVLHKIETQLHFSPQVNDQ---SSSLTSFRASESPRPPHGIHVNPKYL---RQLDH 231

Query: 583  ATADVQRGTGVSSSLQMFGKKPDFSYGDKYDVGDTEIVNPHVRVGKVGPPGTKSSKFQVQ 762
            +TAD     G SS+L+++GKKP   Y D+Y+    E ++  V VG+  P           
Sbjct: 232  STAD-NHAKGTSSNLKIYGKKPTVGY-DEYESDQAEAISSQVGVGRNSP----------- 278

Query: 763  SLSPSNNGFGTDKSPERAAPSHLRFEYAPSRVSGRDGERNDWWSKHGSDLD--------- 915
                        +  E  +PSH  F+Y  SR   RD E N+    + SD +         
Sbjct: 279  -----------RRFVEALSPSHPLFDYVHSRAIVRDEEANELRRNNYSDDNHNRFEPSAR 327

Query: 916  -------DQQRPRALIDAYGNYRGK-----NTLNVERLEVNNFSSEASTRKWQNTEEEEY 1059
                   + Q PRALIDAYG+ RGK       L++E+L VN   ++ ++R WQNTEEEE+
Sbjct: 328  YRLSNGLEHQGPRALIDAYGDDRGKRITSSKPLHIEQLAVNGVHNKVASRSWQNTEEEEF 387

Query: 1060 VWEDMSPTLADR-RSGESMPFN-PTYGSLQTRVPLGRSTVGPPEPDLR--RSNWPNQPLR 1227
             WEDMSPTL++R RS + +P + P +GS+  R   GR +    E D+R  RS W N P  
Sbjct: 388  DWEDMSPTLSERGRSNDFLPSSIPPFGSVVPRPAFGRLSAIHAESDIRSNRSTW-NFP-- 444

Query: 1228 PVVDDSAITAEDGISVLGPGR------GSSSNQVVGGPQAQNVASQIPGPSYSSNLHGQF 1389
            P +  SA      ++  G GR        S    +GG     +A ++P      N     
Sbjct: 445  PHIHQSAHL----LNSKGRGRDFQMPLSGSGVSSLGGENYSPLAEKLPDIDAQLNRPPAI 500

Query: 1390 PQSF-PHINREASGRAGQMSFPPTA---PPAGQR--LPPFHDGNN------IFPKEPGHL 1533
               +  +I+  +SG    ++ PP++   PP   R  LPP H   N      + P +P  L
Sbjct: 501  ASRWGSNIDSTSSGTWSSVA-PPSSGVWPPVNARKSLPPPHAALNQQNQAHVNPFQPQQL 559

Query: 1534 QPHMFKPLEAGEGFTSLVPAQMSSHVGAQPLNHGHTPQGHNPLLSLPFLNHNPFSS--PP 1707
              H  +      G TS+ P  +     A PLNHG+   GH+  +S+   N  P      P
Sbjct: 560  PSHEARENFHPSGVTSMPPRPL-----APPLNHGYNTHGHSTAISMVPSNALPAVQLPLP 614

Query: 1708 IRNMQNNNSFQSHGGGT 1758
            + N+ N +       G+
Sbjct: 615  VNNIPNISGVPGQPSGS 631


>ref|XP_007026008.1| PCF11P-similar protein 4, putative isoform 1 [Theobroma cacao]
            gi|508781374|gb|EOY28630.1| PCF11P-similar protein 4,
            putative isoform 1 [Theobroma cacao]
          Length = 1004

 Score =  358 bits (919), Expect = 9e-96
 Identities = 248/594 (41%), Positives = 321/594 (54%), Gaps = 60/594 (10%)
 Frame = +1

Query: 46   DDEDDYSPLSVDDIVRVYDIVLSDLTFNSKPIITDLTIIAGEQRDCAEGIAEVICNRIAE 225
            DDE   +P S  +IV++Y+ VLS+LTFNSKPIITDLTIIAGEQR+  EGIA+ IC RI E
Sbjct: 37   DDEVAATP-SRGEIVQLYEAVLSELTFNSKPIITDLTIIAGEQREHGEGIADAICARILE 95

Query: 226  APVDQKLPSLYLLDSIVKNIGSAYVRHFSSRLHEVFFAAYNQVHPNQHPAMRHLFGTWSA 405
             PV+QKLPSLYLLDSIVKNIG  YVRHFSSRL EVF  AY QV+PN +PAMRHLFGTWS 
Sbjct: 96   VPVEQKLPSLYLLDSIVKNIGREYVRHFSSRLPEVFCEAYRQVNPNLYPAMRHLFGTWST 155

Query: 406  VFPPPVLRRIGAELQLSTPTNHQPTGSLALTSSGSMSPRPAHGIHVNPKYLEARRQFEHA 585
            VFPP VLR+I  +LQ S   N Q  G  +L S  S SPRP HGIHVNPKYL    Q   A
Sbjct: 156  VFPPSVLRKIEIQLQFSQSANQQSPGVTSLRS--SESPRPTHGIHVNPKYLRQLEQQSGA 213

Query: 586  TADVQRGTGVSSSLQMFGKKPDFSYGDKYDVGDTEIVNPHVRVGKVGPPG---------- 735
             ++ Q   G S++L+++G+K    + D++D   TE+ + HV V ++   G          
Sbjct: 214  DSNTQHVRGTSAALKVYGQKHSIGF-DEFDSDHTEVPSSHVGVRRLRSTGNVGRTSVVVG 272

Query: 736  -TKSSKFQVQSLSPSNNG-----------FGTDKSPER----AAPSHLRFEYAPSRVSGR 867
              KS+    +  SPS  G             +D SP R     +PS   F+Y   R   R
Sbjct: 273  ANKSASIVSRPFSPSRIGSDRLVLSEVDDLPSDGSPRRFVEGTSPSRPVFDYGRGRAIVR 332

Query: 868  DGERNDWWSKHG-----------------SDLDDQQRPRALIDAYGNYRGKNTLN----- 981
            D E  +W  KH                  S+  ++Q PRALIDAYGN RGK   N     
Sbjct: 333  DEETREWQRKHSYDDYHNRSESSLNAYKLSNGHERQTPRALIDAYGNDRGKGISNSKPAQ 392

Query: 982  VERLEVNNFSSEASTRKWQNTEEEEYVWEDMSPTLADR-RSGE-SMPFNPTYGSLQTRVP 1155
            VERL VN   ++ +   WQNTEEEE+ WEDMSPTLADR RS + S+   P +GS+  R P
Sbjct: 393  VERLAVNGMGNKVTPISWQNTEEEEFDWEDMSPTLADRSRSNDFSLSSVPPFGSIGER-P 451

Query: 1156 LGRSTVGPPEPDLRRSNWPNQPLRPVVDDSAITAEDGISVLGPGRGSSSNQVVGGPQAQN 1335
             G  +         RS+   Q   P+VDDS+   ++ +S L  GRGSS          Q 
Sbjct: 452  AGLESNS-------RSSRATQTQLPLVDDSSTIPKNAVSSLSSGRGSS----------QI 494

Query: 1336 VASQIPGPSYSSNLHGQFPQSFPHINREASGRAGQMSFPPTAPPA--GQRLPP----FHD 1497
            + S  P  +++S+ H  F Q   +++ +  GR  Q+ F  +   +  G+++ P      D
Sbjct: 495  LHSHHPQEAWNSSYH--FSQPSRNLHAKGRGRDFQIPFSASGIQSLGGEKIVPLIDKLPD 552

Query: 1498 GNNIFPKEPGHLQPHMFKPLEAGEGFTSLV----PAQMSSHVGAQPLNHGHTPQ 1647
            G + F      L+P    P        S+     PA + S  G  P  + H  Q
Sbjct: 553  GGSQF------LRPPAVVPRTGSSSLDSVTVGARPAIIPSTTGVWPPVNVHKSQ 600


>ref|XP_010909642.1| PREDICTED: polyadenylation and cleavage factor homolog 4-like [Elaeis
            guineensis]
          Length = 1053

 Score =  356 bits (914), Expect = 4e-95
 Identities = 221/526 (42%), Positives = 292/526 (55%), Gaps = 62/526 (11%)
 Frame = +1

Query: 52   EDDYSPLSVDDIVRVYDIVLSDLTFNSKPIITDLTIIAGEQRDCAEGIAEVICNRIAEAP 231
            +D   P +  +IVR Y  +LS+LTFNSKP+IT+L+IIAG+    AEGIA+ IC R+ E P
Sbjct: 84   DDPPPPPTAGEIVRFYKELLSELTFNSKPVITELSIIAGQHSQFAEGIADAICARVLEVP 143

Query: 232  VDQKLPSLYLLDSIVKNIGSAYVRHFSSRLHEVFFAAYNQVHPNQHPAMRHLFGTWSAVF 411
            VDQKLP LYLLDSIVKNIG  YV++F++ L +VF  AYNQV P Q+ AMRHLFGTW  VF
Sbjct: 144  VDQKLPCLYLLDSIVKNIGREYVKYFAACLPKVFCEAYNQVPPTQYSAMRHLFGTWFQVF 203

Query: 412  PPPVLRRIGAELQLSTPTNHQPTGSLALTSSGSMSPRPAHGIHVNPKYLEARRQFEHATA 591
            P  VL +I  ELQ S   N Q +G  +   S S S RP+HGIHVNPKYLEAR+Q +H+T+
Sbjct: 204  PLSVLHKIEDELQFSPTENKQSSGITSTRHSESPSSRPSHGIHVNPKYLEARQQLKHSTS 263

Query: 592  DVQRGTGVSSSLQMFGKKPDFSYGDKYDVGDTEIVNPHVRVGKVGPPGTKSS-------- 747
            D +   GVSSS    G+K      ++Y +   E++ P     + G P T ++        
Sbjct: 264  DTEHVRGVSSS----GQKSSMQC-NEYSIDHPEVLPPRPGAARTGSPQTAATCTTSMVEV 318

Query: 748  -------KFQV------------QSLSPSNNGFGTDKSP----ERAAPSHLRFEYAPSRV 858
                   K ++             S+SP  + F  D SP    ER +PSH  F Y P R 
Sbjct: 319  EGPTRQLKIKISRSSPPPIIGPRNSISPPIDRFSRDTSPRRMLERVSPSHSGFVYGPGRG 378

Query: 859  SGRDGERNDWWSKHGSDLDD------------------QQRPRALIDAYGNYRGKNTL-- 978
            + ++G     W +     DD                  +QR R LIDAYGNY GK+    
Sbjct: 379  TNQNG-----WLERRWPFDDSAQKIQASMAFNLNNGYAKQRSRELIDAYGNYTGKSASLE 433

Query: 979  ---NVERLEVNNFSSEASTRKWQNTEEEEYVWEDMSPTLADRRSGESM-PFNPTYGSLQT 1146
                V+R++VN+ +SE + RKW+N+EEEEYVWEDMSPTL+DR    S+ PF P+   L T
Sbjct: 434  KLPKVQRVDVNSVASERAARKWKNSEEEEYVWEDMSPTLSDRSRRNSLPPFGPSLPPLST 493

Query: 1147 RVPLGRSTVGPPEPDLRRSNWPNQPLRPVVDDSAITAEDGISVLGPGRGSSSNQVVGGPQ 1326
            R  L R      + D  R +WP Q   P V DSA T ED I V G   GS + + +    
Sbjct: 494  RAGLTRPDASLLDHDSGRRSWPGQAQLPAVGDSAFTIEDRIPVFGSAHGSMNRKYLDSTV 553

Query: 1327 AQNVASQIPGPSYSSNLHG------QFPQSFPH-INREASGRAGQM 1443
            +QN    +P    S ++H        FP+S  H ++ ++ GRA QM
Sbjct: 554  SQN--DWLPHYQGSQHMHQPRKLPFMFPKSAQHSLSPQSRGRAHQM 597


>ref|XP_002316604.2| pre-mRNA cleavage complex-related family protein [Populus
            trichocarpa] gi|550327247|gb|EEE97216.2| pre-mRNA
            cleavage complex-related family protein [Populus
            trichocarpa]
          Length = 1031

 Score =  350 bits (897), Expect = 3e-93
 Identities = 229/506 (45%), Positives = 293/506 (57%), Gaps = 48/506 (9%)
 Frame = +1

Query: 70   LSVDDIVRVYDIVLSDLTFNSKPIITDLTIIAGEQRDCAEGIAEVICNRIAEAPVDQKLP 249
            LS +D+V +Y+ VL++LTFNSKPIITDLTIIAGE R+  EGIA+ +C RI E PVD KLP
Sbjct: 59   LSTEDMVEIYETVLNELTFNSKPIITDLTIIAGELREHGEGIADALCGRIVEVPVDLKLP 118

Query: 250  SLYLLDSIVKNIGSAYVRHFSSRLHEVFFAAYNQVHPNQHPAMRHLFGTWSAVFPPPVLR 429
            SLYLLDSIVKNIG  Y+ +FSSRL EVF  AY QV P  +P+MRHLFGTWS+VFP  VLR
Sbjct: 119  SLYLLDSIVKNIGREYIGYFSSRLPEVFCEAYGQVDPRLYPSMRHLFGTWSSVFPSSVLR 178

Query: 430  RIGAELQLSTPTNHQPTGSLALTS-SGSMSPRPAHGIHVNPKYLEARRQFEHATADVQRG 606
            +I  +LQLS+  N+Q   S +LTS   S SPRP+HGIHVNPKYL   RQ + +  +  + 
Sbjct: 179  KIETQLQLSSQINNQ---SSSLTSLKASESPRPSHGIHVNPKYL---RQMDSSRDNNVQH 232

Query: 607  TGVSSSLQMFGKKPDFSYGDKYDVGDTEIVNPHVRVGKVGPPGTKSSKFQVQS------- 765
            T  +S+L+M+G KP   Y D+Y+    E+++  V V +       S+K Q  S       
Sbjct: 233  TKGTSNLKMYGHKPAVGY-DEYETDQAEVISSQVGVDRASLT-LGSNKLQPSSTSRLARR 290

Query: 766  LSPSNNG-----------FGTDKSPER----AAPSHLRFEYAPSRVSGRDGERNDWWSKH 900
            LSPS  G           F    SP R     +PSH  F+Y   RV  RD E N+   KH
Sbjct: 291  LSPSTTGAERPSSSEIDDFAAGNSPRRFVEGLSPSHPPFDYGHGRVVVRDDETNELRRKH 350

Query: 901  GSDLD---------------DQQRPRALIDAYGNYRGK-----NTLNVERLEVNNFSSEA 1020
             SD +               +QQ PRALIDAYG+ RGK       L++E+L V    ++ 
Sbjct: 351  YSDDNHYRFEASARSLSNGHEQQGPRALIDAYGDDRGKRIPNSKPLHIEQLAVIGMHNKV 410

Query: 1021 STRKWQNTEEEEYVWEDMSPTLADR-RSGESMPFN-PTYGSLQTRVPLGRSTVGPPEPDL 1194
            + R WQNTEEEE+ WEDMSPTL DR RS + +P + P +GS+  R   GR      + D+
Sbjct: 411  APRSWQNTEEEEFDWEDMSPTLLDRGRSNDFLPPSVPPFGSVVPRPGFGRLNAIRADSDI 470

Query: 1195 RRSNWPNQPLRPVVDDSAITAEDGISVLGPGRGSSSNQVVGGPQAQNVASQIPGPSYSS- 1371
             RSN  +     +VDDS+    D +S+LG GRGS+S      P      +QI G  YS  
Sbjct: 471  -RSNGSSLTPMALVDDSSNMGGDAVSILGSGRGSTSKM----PGLLTERNQISGSRYSQE 525

Query: 1372 --NLHGQFPQSFPHINREASGRAGQM 1443
              NL     Q    +N +  GR  QM
Sbjct: 526  ARNLPPHIRQPSRLLNAKGRGRDFQM 551


>ref|XP_011037706.1| PREDICTED: polyadenylation and cleavage factor homolog 4-like isoform
            X5 [Populus euphratica]
          Length = 1035

 Score =  348 bits (894), Expect = 7e-93
 Identities = 260/686 (37%), Positives = 350/686 (51%), Gaps = 118/686 (17%)
 Frame = +1

Query: 46   DDEDDYSPLSVDDIVRVYDIVLSDLTFNSKPIITDLTIIAGEQRDCAEGIAEVICNRIAE 225
            D   D + LS++D+V +Y+ VL++LTFNSKPIITDLTIIAGEQR+  EGIA+V+C RI E
Sbjct: 58   DGGGDGASLSMEDVVEIYETVLNELTFNSKPIITDLTIIAGEQREHGEGIADVLCARIVE 117

Query: 226  APVDQKLPSLYLLDSIVKNIGSAYVRHFSSRLHEVFFAAYNQVHPNQHPAMRHLFGTWSA 405
            APVDQKLPSLYLLDSIVKNIG  Y+RHFSSRL EVF  AY QV P+ +P+MRHLFGTWS+
Sbjct: 118  APVDQKLPSLYLLDSIVKNIGREYIRHFSSRLPEVFCEAYRQVDPSLYPSMRHLFGTWSS 177

Query: 406  VFPPPVLRRIGAELQLSTPTNHQPTGSLALTS-SGSMSPRPAHGIHVNPKYLEARRQFEH 582
            VFP  VL +I  +L  S   N+Q   S +LTS   S SPRP HGIHVNPKYL   RQ +H
Sbjct: 178  VFPSSVLHKIETQLDFSPQVNNQ---SSSLTSFRASESPRPPHGIHVNPKYL---RQLDH 231

Query: 583  ATAD--VQRGTGVSSSLQMFGKKPDFSYGDKYDVGDTEIVNPHVRVG---------KVGP 729
            +TAD  VQ   G +S+L+++GKKP   Y D+Y+    E ++  V +G         K+ P
Sbjct: 232  STADNNVQHTKG-TSNLKIYGKKPAVGY-DEYESDQAEAISSQVGMGRTSLILGSNKLQP 289

Query: 730  PGTKSSKFQV--------QSLSPSNNGFGTDKSPER----AAPSHLRFEYAPSRVSGRDG 873
              T     ++        + LS   +      SP R     +PS   F+Y  SR   RD 
Sbjct: 290  SSTSRLARRLLPLTTGAERPLSSEIDDLAVGNSPRRFVEGLSPSRPLFDYGHSRTIVRDE 349

Query: 874  ERNDWWSKHGSDLD----------------DQQRPRALIDAYGNYRGK-----NTLNVER 990
            E N+    + SD +                + Q PRALIDAYG+ RGK       L++E+
Sbjct: 350  EANELRRNNYSDDNHNRFEPSARYRLSNGLEHQGPRALIDAYGDDRGKRITSSKPLHIEQ 409

Query: 991  LEVNNFSSEASTRKWQNTEEEEYVWEDMSPTLADR-RSGESMPFN-PTYGSLQTRVPLGR 1164
            L VN   ++ ++R WQNTEEEE+ WEDMSPTL++  R+ + +P + P +GS+  R   GR
Sbjct: 410  LAVNGMHNKVASRSWQNTEEEEFDWEDMSPTLSEHGRTNDFLPSSIPPFGSVVPRPAFGR 469

Query: 1165 STVGPPEPDLRRSNWPNQPLRPVVDDSAITAEDGISVLGPGRGSSS---------NQVVG 1317
             +    E D+R +     P+   VD S+  AE+ +S+LG GRGS+S         NQ++G
Sbjct: 470  LSAIHAESDIRSNRSSLAPMAS-VDGSSNIAEEAVSILGSGRGSTSKIPGFRTERNQILG 528

Query: 1318 G-------------------------------PQAQNVASQIPGPSYSSNLHGQFPQSFP 1404
                                            P + +  S + G +YS  L  + P    
Sbjct: 529  SRHHQEAWNFPPHIHQSAHLLNSKGRGRDFQMPLSGSGVSSLGGENYSP-LAEKLPDIDA 587

Query: 1405 HINREA-----------SGRAGQMS--FPPTA---PPAGQRL---PPFHDGNNIFPKEPG 1527
             +NR             S  +G  S   PP++   PP   R    PP H    IFP  P 
Sbjct: 588  QLNRSPAIASRWGSNIDSTSSGTWSSVVPPSSGVWPPVNARKSLPPPVH---RIFP--PP 642

Query: 1528 HLQPHMFKPLEAGEGFTSLVPAQMSSHVGAQPLNHGHTPQGHNPLLSLPFLNH------- 1686
                  F P+ A     + V  Q  S +  QP N G   + +N +   P  N        
Sbjct: 643  EQSRSQFDPINASSTVINQV-LQKGSAMPEQPFN-GFENKDYNSMKPTPMSNQHAALNQQ 700

Query: 1687 -----NPFSSPPIRNMQNNNSFQSHG 1749
                 NPF    + + +   +F   G
Sbjct: 701  NQAHVNPFQPQQLPSHETRENFHPSG 726


>ref|XP_008784554.1| PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC103703477
            [Phoenix dactylifera]
          Length = 1063

 Score =  348 bits (892), Expect = 1e-92
 Identities = 231/582 (39%), Positives = 305/582 (52%), Gaps = 100/582 (17%)
 Frame = +1

Query: 52   EDDYSPLSVDDIVRVYDIVLSDLTFNSKPIITDLTIIAGEQRDCAEGIAEVICNRIAEAP 231
            ED   P +  +IVR+Y+ +LS+LTFNSKPIIT+LTIIAG+    AEGIA+ IC R+ E P
Sbjct: 62   EDTPRPPTAGEIVRLYEELLSELTFNSKPIITELTIIAGQHLQFAEGIADAICVRVLEVP 121

Query: 232  VDQKLPSLYLLDSIVKNIGSAYVRHFSSRLHEVFFAAYNQVHPNQHPAMRHLFGTWSAVF 411
            +DQKLPSLYLLDSIVKNIG  Y+R+F++RL +VF  AYNQVHPNQ+PAMRHLFGTW  VF
Sbjct: 122  LDQKLPSLYLLDSIVKNIGREYMRYFAARLPKVFCEAYNQVHPNQYPAMRHLFGTWFQVF 181

Query: 412  PPPVLRRIGAELQLSTPTNHQPTGSLALTSSGSMSPRPAHGIHVNPKYLEARRQFEHATA 591
            P  VLR+I  ELQ S   ++Q +G  ++  S S SPRP+HGIHVNPKYLEAR  F+H+TA
Sbjct: 182  PLSVLRKIEDELQFSPSKSNQSSGITSMRRSESPSPRPSHGIHVNPKYLEARHLFKHSTA 241

Query: 592  ---------------------------------------DVQRGTGVSSSLQMFGKKPDF 654
                                                   D++   GVSSSLQ++G+K   
Sbjct: 242  VRAVESHDKVHMTDFNGEQMEENASEGLKGWSGASPKFHDIEHARGVSSSLQVYGRKSSM 301

Query: 655  SYGDKYDVGDTEI----------VNPHVRVGKV-------GPPGTKSSKFQ--------- 756
               +KYD+ + E+           +PH    +        GP     SKF          
Sbjct: 302  QC-NKYDIDNPEVRPSRRGILRAGSPHTAATQASSMVEVEGPTHHSKSKFSRFSPPPIIG 360

Query: 757  -VQSLSPSNNGFGTDKSP----ERAAPSHLRFEYAPSRVSGRDGERNDWW---------- 891
              +S+ P  + F  + SP    ERA+PSH          +GR   +N W+          
Sbjct: 361  PRKSILPLTDRFSRNTSPRRVLERASPSH--------SGAGRGTNQNSWFERIWPFDDVT 412

Query: 892  ----SKHGSDLDD---QQRPRALIDAYGNYRGKNTL-----NVERLEVNNFSSEASTRKW 1035
                S    +L++   ++  R LIDAYGN  G +T       V+RL+VN  +SEA+  KW
Sbjct: 413  QQVKSSMAFNLNNGYAEKHSRELIDAYGNCSGTSTSLEKLPKVQRLDVNGLASEAANIKW 472

Query: 1036 QNTEEEEYVWEDMSPTLADR-RSGESMPFNPTYGSLQTRVPLGRSTVGPPEPDLRRSNWP 1212
            +N+EEEEYVWEDMSPTL+DR R     P   + GSL  R  L R      E D  R +WP
Sbjct: 473  KNSEEEEYVWEDMSPTLSDRSRRNSQPPLGRSTGSLSIRGGLTRPDASLLEHDFGRHSWP 532

Query: 1213 NQPLRPVVDDSAITAEDGISVLGPGRGSSSNQVVGGPQAQNVASQIPGPSYSSNLHGQFP 1392
             Q     VDD A T ED I + G   GS + + +     QN        S+ +    + P
Sbjct: 533  GQ--AQAVDDPAYTVEDRIPLFGSAHGSRNRKNLDSIVNQNKLLLHSQGSHHTREPRKLP 590

Query: 1393 QSFPH-----INREASGRAGQMSFPPT--APPAGQRLPPFHD 1497
               P      ++ +A GRA QM    +   PP G +LP  ++
Sbjct: 591  YVLPQSSQQSLSPQARGRAPQMPVAASGITPPIGNKLPNLYE 632


>ref|XP_012450329.1| PREDICTED: polyadenylation and cleavage factor homolog 4 isoform X2
            [Gossypium raimondii]
          Length = 1001

 Score =  345 bits (884), Expect = 1e-91
 Identities = 251/623 (40%), Positives = 330/623 (52%), Gaps = 57/623 (9%)
 Frame = +1

Query: 52   EDDYSPLSVDDIVRVYDIVLSDLTFNSKPIITDLTIIAGEQRDCAEGIAEVICNRIAEAP 231
            +DD +  + ++IV++Y++VLS+LTFNSKPIITDLTIIAGEQR+  EGIA+ IC RI E P
Sbjct: 38   DDDGATPTTEEIVQLYEVVLSELTFNSKPIITDLTIIAGEQREHGEGIADAICARIIEVP 97

Query: 232  VDQKLPSLYLLDSIVKNIGSAYVRHFSSRLHEVFFAAYNQVHPNQHPAMRHLFGTWSAVF 411
            V+QKLPSLYLLDSIVKNIG  YVR+FSSRL EVF  AY QV+PN HPAMRHLFGTWS VF
Sbjct: 98   VEQKLPSLYLLDSIVKNIGREYVRYFSSRLPEVFCEAYRQVNPNLHPAMRHLFGTWSTVF 157

Query: 412  PPPVLRRIGAELQLSTPTNHQPTGSLALTSSGSMSPRPAHGIHVNPKYLEARRQFEHATA 591
            PP VLR+I  +LQ S   N Q +G  +L S  S SPRP HGIHVNPKYL    Q   A +
Sbjct: 158  PPSVLRKIEMQLQFSQTGNQQSSGVTSLQS--SESPRPTHGIHVNPKYLRQFEQQSGADS 215

Query: 592  DVQRGTGVSSSLQMFGKKPDFSYGDKYDVGDTEIVNPHVRVGKVGPPGT--------KSS 747
            + Q   G+S+  +++G+K   +Y D++D   TE+ + HV V ++   G          ++
Sbjct: 216  NTQHVRGMSAGQKLYGQKHTITY-DEFDSDHTEVPSSHVGVQRLSSTGNVGCTSLAIGAN 274

Query: 748  KFQVQS-------LSPSNNG-----------FGTDKSPER----AAPSHLR-FEYAPSRV 858
            K Q+ S        SPS  G             +D SP R    A+PS    F++   R 
Sbjct: 275  KSQLSSASRVSRPFSPSRIGSDRLLSSEVDDLPSDDSPRRFAEVASPSRPPVFDFGRGRG 334

Query: 859  SGRDGERNDWWSKHG-----------------SDLDDQQRPRALIDAYGNYRGKNTLN-- 981
            + RD E  +W  KH                  S+ +++Q  RALIDAYGN RG+   N  
Sbjct: 335  TIRDEETREWPRKHFYGDYRNCSEGSLNSYKLSNGNERQTLRALIDAYGNDRGQGMSNSK 394

Query: 982  ---VERLEVNNFSSEASTRKWQNTEEEEYVWEDMSPTLADRRSGE-SMPFNPTYGSLQTR 1149
               VERL+VN   ++ + R WQNTEEEE+ WEDMSPTLADRRS E S+    T+GS+  R
Sbjct: 395  PVQVERLDVNGMGNKVTPRSWQNTEEEEFDWEDMSPTLADRRSNEFSVSSVATFGSIGAR 454

Query: 1150 VPLGRSTVGPPEPDLRRSNWPNQPLRPVVDDSAITAEDGISVLGPGRGSSSNQVVGGPQA 1329
                     P   +  RS+  NQ  +  +D+S+   ED +  L  G G +  Q    PQ 
Sbjct: 455  ---------PAGLESNRSSRSNQ-TQLALDESSTIPEDAVPSLSSGHGLNQIQRPRYPQ- 503

Query: 1330 QNVASQIPGPSYSSNLHGQFPQSFPHINREASG---RAGQMSFPPTAPPAGQRLPPFHDG 1500
               ++  P    S  LH +       I   ASG     G+ + P       ++LP   +G
Sbjct: 504  DAWSNSYPFSQSSHQLHAKGRGRDFWIPFSASGISSLGGEKNVPLI-----EKLP---EG 555

Query: 1501 NNIFPKEPGHLQPHMFKPLEAGEGFTSLVPAQMSSHVGAQPLNHGHTPQGHNPLLSLPFL 1680
             + F + P          L    G +SL    + +     PL  G  P    P+      
Sbjct: 556  GSQFVRPPA---------LVPRSGSSSLDTVTVVTQPAMLPLTAGAWP----PV------ 596

Query: 1681 NHNPFSSPPIRNMQNNNSFQSHG 1749
             + P S PP  N   N S Q HG
Sbjct: 597  -NVPKSQPP--NAHTNYSLQQHG 616


>gb|KJB67158.1| hypothetical protein B456_010G178200 [Gossypium raimondii]
          Length = 1024

 Score =  345 bits (884), Expect = 1e-91
 Identities = 251/623 (40%), Positives = 330/623 (52%), Gaps = 57/623 (9%)
 Frame = +1

Query: 52   EDDYSPLSVDDIVRVYDIVLSDLTFNSKPIITDLTIIAGEQRDCAEGIAEVICNRIAEAP 231
            +DD +  + ++IV++Y++VLS+LTFNSKPIITDLTIIAGEQR+  EGIA+ IC RI E P
Sbjct: 38   DDDGATPTTEEIVQLYEVVLSELTFNSKPIITDLTIIAGEQREHGEGIADAICARIIEVP 97

Query: 232  VDQKLPSLYLLDSIVKNIGSAYVRHFSSRLHEVFFAAYNQVHPNQHPAMRHLFGTWSAVF 411
            V+QKLPSLYLLDSIVKNIG  YVR+FSSRL EVF  AY QV+PN HPAMRHLFGTWS VF
Sbjct: 98   VEQKLPSLYLLDSIVKNIGREYVRYFSSRLPEVFCEAYRQVNPNLHPAMRHLFGTWSTVF 157

Query: 412  PPPVLRRIGAELQLSTPTNHQPTGSLALTSSGSMSPRPAHGIHVNPKYLEARRQFEHATA 591
            PP VLR+I  +LQ S   N Q +G  +L S  S SPRP HGIHVNPKYL    Q   A +
Sbjct: 158  PPSVLRKIEMQLQFSQTGNQQSSGVTSLQS--SESPRPTHGIHVNPKYLRQFEQQSGADS 215

Query: 592  DVQRGTGVSSSLQMFGKKPDFSYGDKYDVGDTEIVNPHVRVGKVGPPGT--------KSS 747
            + Q   G+S+  +++G+K   +Y D++D   TE+ + HV V ++   G          ++
Sbjct: 216  NTQHVRGMSAGQKLYGQKHTITY-DEFDSDHTEVPSSHVGVQRLSSTGNVGCTSLAIGAN 274

Query: 748  KFQVQS-------LSPSNNG-----------FGTDKSPER----AAPSHLR-FEYAPSRV 858
            K Q+ S        SPS  G             +D SP R    A+PS    F++   R 
Sbjct: 275  KSQLSSASRVSRPFSPSRIGSDRLLSSEVDDLPSDDSPRRFAEVASPSRPPVFDFGRGRG 334

Query: 859  SGRDGERNDWWSKHG-----------------SDLDDQQRPRALIDAYGNYRGKNTLN-- 981
            + RD E  +W  KH                  S+ +++Q  RALIDAYGN RG+   N  
Sbjct: 335  TIRDEETREWPRKHFYGDYRNCSEGSLNSYKLSNGNERQTLRALIDAYGNDRGQGMSNSK 394

Query: 982  ---VERLEVNNFSSEASTRKWQNTEEEEYVWEDMSPTLADRRSGE-SMPFNPTYGSLQTR 1149
               VERL+VN   ++ + R WQNTEEEE+ WEDMSPTLADRRS E S+    T+GS+  R
Sbjct: 395  PVQVERLDVNGMGNKVTPRSWQNTEEEEFDWEDMSPTLADRRSNEFSVSSVATFGSIGAR 454

Query: 1150 VPLGRSTVGPPEPDLRRSNWPNQPLRPVVDDSAITAEDGISVLGPGRGSSSNQVVGGPQA 1329
                     P   +  RS+  NQ  +  +D+S+   ED +  L  G G +  Q    PQ 
Sbjct: 455  ---------PAGLESNRSSRSNQ-TQLALDESSTIPEDAVPSLSSGHGLNQIQRPRYPQ- 503

Query: 1330 QNVASQIPGPSYSSNLHGQFPQSFPHINREASG---RAGQMSFPPTAPPAGQRLPPFHDG 1500
               ++  P    S  LH +       I   ASG     G+ + P       ++LP   +G
Sbjct: 504  DAWSNSYPFSQSSHQLHAKGRGRDFWIPFSASGISSLGGEKNVPLI-----EKLP---EG 555

Query: 1501 NNIFPKEPGHLQPHMFKPLEAGEGFTSLVPAQMSSHVGAQPLNHGHTPQGHNPLLSLPFL 1680
             + F + P          L    G +SL    + +     PL  G  P    P+      
Sbjct: 556  GSQFVRPPA---------LVPRSGSSSLDTVTVVTQPAMLPLTAGAWP----PV------ 596

Query: 1681 NHNPFSSPPIRNMQNNNSFQSHG 1749
             + P S PP  N   N S Q HG
Sbjct: 597  -NVPKSQPP--NAHTNYSLQQHG 616


>gb|KJB67157.1| hypothetical protein B456_010G178200 [Gossypium raimondii]
          Length = 831

 Score =  345 bits (884), Expect = 1e-91
 Identities = 251/623 (40%), Positives = 330/623 (52%), Gaps = 57/623 (9%)
 Frame = +1

Query: 52   EDDYSPLSVDDIVRVYDIVLSDLTFNSKPIITDLTIIAGEQRDCAEGIAEVICNRIAEAP 231
            +DD +  + ++IV++Y++VLS+LTFNSKPIITDLTIIAGEQR+  EGIA+ IC RI E P
Sbjct: 38   DDDGATPTTEEIVQLYEVVLSELTFNSKPIITDLTIIAGEQREHGEGIADAICARIIEVP 97

Query: 232  VDQKLPSLYLLDSIVKNIGSAYVRHFSSRLHEVFFAAYNQVHPNQHPAMRHLFGTWSAVF 411
            V+QKLPSLYLLDSIVKNIG  YVR+FSSRL EVF  AY QV+PN HPAMRHLFGTWS VF
Sbjct: 98   VEQKLPSLYLLDSIVKNIGREYVRYFSSRLPEVFCEAYRQVNPNLHPAMRHLFGTWSTVF 157

Query: 412  PPPVLRRIGAELQLSTPTNHQPTGSLALTSSGSMSPRPAHGIHVNPKYLEARRQFEHATA 591
            PP VLR+I  +LQ S   N Q +G  +L S  S SPRP HGIHVNPKYL    Q   A +
Sbjct: 158  PPSVLRKIEMQLQFSQTGNQQSSGVTSLQS--SESPRPTHGIHVNPKYLRQFEQQSGADS 215

Query: 592  DVQRGTGVSSSLQMFGKKPDFSYGDKYDVGDTEIVNPHVRVGKVGPPGT--------KSS 747
            + Q   G+S+  +++G+K   +Y D++D   TE+ + HV V ++   G          ++
Sbjct: 216  NTQHVRGMSAGQKLYGQKHTITY-DEFDSDHTEVPSSHVGVQRLSSTGNVGCTSLAIGAN 274

Query: 748  KFQVQS-------LSPSNNG-----------FGTDKSPER----AAPSHLR-FEYAPSRV 858
            K Q+ S        SPS  G             +D SP R    A+PS    F++   R 
Sbjct: 275  KSQLSSASRVSRPFSPSRIGSDRLLSSEVDDLPSDDSPRRFAEVASPSRPPVFDFGRGRG 334

Query: 859  SGRDGERNDWWSKHG-----------------SDLDDQQRPRALIDAYGNYRGKNTLN-- 981
            + RD E  +W  KH                  S+ +++Q  RALIDAYGN RG+   N  
Sbjct: 335  TIRDEETREWPRKHFYGDYRNCSEGSLNSYKLSNGNERQTLRALIDAYGNDRGQGMSNSK 394

Query: 982  ---VERLEVNNFSSEASTRKWQNTEEEEYVWEDMSPTLADRRSGE-SMPFNPTYGSLQTR 1149
               VERL+VN   ++ + R WQNTEEEE+ WEDMSPTLADRRS E S+    T+GS+  R
Sbjct: 395  PVQVERLDVNGMGNKVTPRSWQNTEEEEFDWEDMSPTLADRRSNEFSVSSVATFGSIGAR 454

Query: 1150 VPLGRSTVGPPEPDLRRSNWPNQPLRPVVDDSAITAEDGISVLGPGRGSSSNQVVGGPQA 1329
                     P   +  RS+  NQ  +  +D+S+   ED +  L  G G +  Q    PQ 
Sbjct: 455  ---------PAGLESNRSSRSNQ-TQLALDESSTIPEDAVPSLSSGHGLNQIQRPRYPQ- 503

Query: 1330 QNVASQIPGPSYSSNLHGQFPQSFPHINREASG---RAGQMSFPPTAPPAGQRLPPFHDG 1500
               ++  P    S  LH +       I   ASG     G+ + P       ++LP   +G
Sbjct: 504  DAWSNSYPFSQSSHQLHAKGRGRDFWIPFSASGISSLGGEKNVPLI-----EKLP---EG 555

Query: 1501 NNIFPKEPGHLQPHMFKPLEAGEGFTSLVPAQMSSHVGAQPLNHGHTPQGHNPLLSLPFL 1680
             + F + P          L    G +SL    + +     PL  G  P    P+      
Sbjct: 556  GSQFVRPPA---------LVPRSGSSSLDTVTVVTQPAMLPLTAGAWP----PV------ 596

Query: 1681 NHNPFSSPPIRNMQNNNSFQSHG 1749
             + P S PP  N   N S Q HG
Sbjct: 597  -NVPKSQPP--NAHTNYSLQQHG 616


>ref|XP_012450328.1| PREDICTED: polyadenylation and cleavage factor homolog 4 isoform X1
            [Gossypium raimondii] gi|763800201|gb|KJB67156.1|
            hypothetical protein B456_010G178200 [Gossypium
            raimondii]
          Length = 1004

 Score =  345 bits (884), Expect = 1e-91
 Identities = 251/623 (40%), Positives = 330/623 (52%), Gaps = 57/623 (9%)
 Frame = +1

Query: 52   EDDYSPLSVDDIVRVYDIVLSDLTFNSKPIITDLTIIAGEQRDCAEGIAEVICNRIAEAP 231
            +DD +  + ++IV++Y++VLS+LTFNSKPIITDLTIIAGEQR+  EGIA+ IC RI E P
Sbjct: 38   DDDGATPTTEEIVQLYEVVLSELTFNSKPIITDLTIIAGEQREHGEGIADAICARIIEVP 97

Query: 232  VDQKLPSLYLLDSIVKNIGSAYVRHFSSRLHEVFFAAYNQVHPNQHPAMRHLFGTWSAVF 411
            V+QKLPSLYLLDSIVKNIG  YVR+FSSRL EVF  AY QV+PN HPAMRHLFGTWS VF
Sbjct: 98   VEQKLPSLYLLDSIVKNIGREYVRYFSSRLPEVFCEAYRQVNPNLHPAMRHLFGTWSTVF 157

Query: 412  PPPVLRRIGAELQLSTPTNHQPTGSLALTSSGSMSPRPAHGIHVNPKYLEARRQFEHATA 591
            PP VLR+I  +LQ S   N Q +G  +L S  S SPRP HGIHVNPKYL    Q   A +
Sbjct: 158  PPSVLRKIEMQLQFSQTGNQQSSGVTSLQS--SESPRPTHGIHVNPKYLRQFEQQSGADS 215

Query: 592  DVQRGTGVSSSLQMFGKKPDFSYGDKYDVGDTEIVNPHVRVGKVGPPGT--------KSS 747
            + Q   G+S+  +++G+K   +Y D++D   TE+ + HV V ++   G          ++
Sbjct: 216  NTQHVRGMSAGQKLYGQKHTITY-DEFDSDHTEVPSSHVGVQRLSSTGNVGCTSLAIGAN 274

Query: 748  KFQVQS-------LSPSNNG-----------FGTDKSPER----AAPSHLR-FEYAPSRV 858
            K Q+ S        SPS  G             +D SP R    A+PS    F++   R 
Sbjct: 275  KSQLSSASRVSRPFSPSRIGSDRLLSSEVDDLPSDDSPRRFAEVASPSRPPVFDFGRGRG 334

Query: 859  SGRDGERNDWWSKHG-----------------SDLDDQQRPRALIDAYGNYRGKNTLN-- 981
            + RD E  +W  KH                  S+ +++Q  RALIDAYGN RG+   N  
Sbjct: 335  TIRDEETREWPRKHFYGDYRNCSEGSLNSYKLSNGNERQTLRALIDAYGNDRGQGMSNSK 394

Query: 982  ---VERLEVNNFSSEASTRKWQNTEEEEYVWEDMSPTLADRRSGE-SMPFNPTYGSLQTR 1149
               VERL+VN   ++ + R WQNTEEEE+ WEDMSPTLADRRS E S+    T+GS+  R
Sbjct: 395  PVQVERLDVNGMGNKVTPRSWQNTEEEEFDWEDMSPTLADRRSNEFSVSSVATFGSIGAR 454

Query: 1150 VPLGRSTVGPPEPDLRRSNWPNQPLRPVVDDSAITAEDGISVLGPGRGSSSNQVVGGPQA 1329
                     P   +  RS+  NQ  +  +D+S+   ED +  L  G G +  Q    PQ 
Sbjct: 455  ---------PAGLESNRSSRSNQ-TQLALDESSTIPEDAVPSLSSGHGLNQIQRPRYPQ- 503

Query: 1330 QNVASQIPGPSYSSNLHGQFPQSFPHINREASG---RAGQMSFPPTAPPAGQRLPPFHDG 1500
               ++  P    S  LH +       I   ASG     G+ + P       ++LP   +G
Sbjct: 504  DAWSNSYPFSQSSHQLHAKGRGRDFWIPFSASGISSLGGEKNVPLI-----EKLP---EG 555

Query: 1501 NNIFPKEPGHLQPHMFKPLEAGEGFTSLVPAQMSSHVGAQPLNHGHTPQGHNPLLSLPFL 1680
             + F + P          L    G +SL    + +     PL  G  P    P+      
Sbjct: 556  GSQFVRPPA---------LVPRSGSSSLDTVTVVTQPAMLPLTAGAWP----PV------ 596

Query: 1681 NHNPFSSPPIRNMQNNNSFQSHG 1749
             + P S PP  N   N S Q HG
Sbjct: 597  -NVPKSQPP--NAHTNYSLQQHG 616