BLASTX nr result
ID: Papaver30_contig00004202
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Papaver30_contig00004202
(2044 letters)
Database: ./nr
77,306,371 sequences; 28,104,191,420 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_010251272.1| PREDICTED: DNA-directed RNA polymerase III s... 592 e-166
ref|XP_010662742.1| PREDICTED: DNA-directed RNA polymerase III s... 566 e-158
ref|XP_010035145.1| PREDICTED: DNA-directed RNA polymerase III s... 517 e-143
gb|KCW46437.1| hypothetical protein EUGRSUZ_K00269 [Eucalyptus g... 517 e-143
ref|XP_007038704.1| RNA polymerase III subunit RPC82 family prot... 511 e-141
ref|XP_006421933.1| hypothetical protein CICLE_v10004721mg [Citr... 496 e-137
ref|XP_006490400.1| PREDICTED: DNA-directed RNA polymerase III s... 491 e-135
gb|KDO52031.1| hypothetical protein CISIN_1g009725mg [Citrus sin... 491 e-135
ref|XP_004240730.1| PREDICTED: DNA-directed RNA polymerase III s... 489 e-135
emb|CDP05190.1| unnamed protein product [Coffea canephora] 484 e-133
ref|XP_006363319.1| PREDICTED: DNA-directed RNA polymerase III s... 484 e-133
ref|XP_009767753.1| PREDICTED: DNA-directed RNA polymerase III s... 483 e-133
ref|XP_012090252.1| PREDICTED: uncharacterized protein LOC105648... 482 e-133
ref|XP_011076159.1| PREDICTED: DNA-directed RNA polymerase III s... 479 e-132
ref|XP_009627999.1| PREDICTED: DNA-directed RNA polymerase III s... 479 e-132
ref|XP_009627995.1| PREDICTED: DNA-directed RNA polymerase III s... 479 e-132
ref|XP_009627989.1| PREDICTED: DNA-directed RNA polymerase III s... 478 e-131
ref|XP_012484103.1| PREDICTED: DNA-directed RNA polymerase III s... 476 e-131
gb|KHG02841.1| DNA-directed RNA polymerase III subunit RPC3 [Gos... 473 e-130
ref|XP_011651154.1| PREDICTED: DNA-directed RNA polymerase III s... 453 e-124
>ref|XP_010251272.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC3 [Nelumbo
nucifera]
Length = 531
Score = 592 bits (1527), Expect = e-166
Identities = 308/534 (57%), Positives = 398/534 (74%), Gaps = 10/534 (1%)
Frame = -1
Query: 1771 MVLQNGIKLASSLIYENFADLVGKVCDCLLRKGALTLPELTRFTELPSQQVKNCLLVLIQ 1592
M Q IKLA SLI +F DLV KVC+CLLRKG+LTL ++TRFTELP QVKNCLLVLIQ
Sbjct: 1 MATQYSIKLAISLISSHFGDLVAKVCECLLRKGSLTLADITRFTELPQAQVKNCLLVLIQ 60
Query: 1591 HNCVLDYSVQKEGGIGEQDKWVVHYAALFDNILHRMRFTKFLTMVAEELDKECKELFEGL 1412
HNCV +S+Q EGG+G K + Y A+FDNILHRMRF KFLT+V+EELDKEC+E+ EGL
Sbjct: 61 HNCVQAFSIQIEGGVGAAPKVITQYTAIFDNILHRMRFPKFLTIVSEELDKECEEILEGL 120
Query: 1411 MQHGRLSLEQLILRAIPEPDQGNIALQDGIRASFGKLVDAHYVERCPDFKPSIPIPPQDG 1232
QHGRL+LEQ+ILRA+ ++GN +QD +R SF ++V +HYVERCP +P + PP +
Sbjct: 121 FQHGRLTLEQIILRAVSNQNEGNSTVQDAVRESFVRIVSSHYVERCPASEPFL-APPDEE 179
Query: 1231 TTSTARRGAKSSKIADQREKTQEQQAIAMASCSEGRRFDITMNYGTDVKSGARIEGN-AP 1055
T +R AKS+++A++ E T E++AI+ A+ E RF + + GTDVKSG R
Sbjct: 180 ENPTKKR-AKSARLAEEIE-TLEKRAISAAAPLESERFAVITDTGTDVKSGDRSGSRFLD 237
Query: 1054 ISIGEKRKHEEIESEHD-----WEKKDLWRVNFDEFVRRLRHKACVTSVRSQLDEGAGTV 890
+IGEKRKHE +E + + EK+ LWR NF+ F+RRLRHKACV +VR+++D+GA TV
Sbjct: 238 TAIGEKRKHEALEMDRETMATICEKEVLWRANFEAFIRRLRHKACVANVRARMDDGACTV 297
Query: 889 LNAILETTRRAEKKVKTEITDPLSINTIYQEVINREEGRTMDLEHVRTALVQLECRVE-- 716
LNA+LE TR AE ++KTE + PLS++ I EV+ E GR+M +E VR AL QL CR
Sbjct: 298 LNAMLEATRNAESRIKTENSVPLSMDAILAEVMKSEGGRSMTVERVRAALGQLGCRSSPR 357
Query: 715 --KEAYRVDLKSIIETAQNMEVESIVEKRYGEYACRIYRYLSRTGHLAETDKIADTTFLE 542
++++ VDL++IIE AQN E+ESIV KRYG A RI+R LS+TG L ETDKI+D TF++
Sbjct: 358 GAEDSHSVDLRNIIEIAQNDEMESIVLKRYGRDAYRIFRLLSKTGRLVETDKISDITFVD 417
Query: 541 KQDALKLLYTLWENRYLEKEKIILSGPTQAQKMLWKVIKCPLWEIVLDEMHHAALNLNQR 362
K++A K+LY LW++ YL EK+ G Q+ +LWKV + LW+ +LDEM HAALNL+QR
Sbjct: 418 KKEAPKILYNLWKDNYLHMEKLTSQGSKQSDFLLWKVNRSSLWKQILDEMCHAALNLSQR 477
Query: 361 MAYELEQEHEIRNLPKEKRVGELGKRFERIRRVKILMESSLMKLDDAIMLFHDF 200
+AYE EQEHEI LP+EKRVG GKRFERIR+VK+++ESSLMKLDDAIMLFHDF
Sbjct: 478 LAYEFEQEHEILQLPREKRVGAQGKRFERIRKVKVILESSLMKLDDAIMLFHDF 531
>ref|XP_010662742.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC3 isoform X1
[Vitis vinifera] gi|302143859|emb|CBI22720.3| unnamed
protein product [Vitis vinifera]
Length = 524
Score = 566 bits (1459), Expect = e-158
Identities = 299/532 (56%), Positives = 390/532 (73%), Gaps = 8/532 (1%)
Frame = -1
Query: 1771 MVLQNGIKLASSLIYENFADLVGKVCDCLLRKGALTLPELTRFTELPSQQVKNCLLVLIQ 1592
M Q G++LA LI +F +LV KVCDCLLRKG LTL + RFTELP QQVK+C+LVLIQ
Sbjct: 1 MATQYGVQLAVHLISSHFGNLVAKVCDCLLRKGTLTLASVIRFTELPPQQVKSCILVLIQ 60
Query: 1591 HNCVLDYSVQKEGGIGEQDKWVVHYAALFDNILHRMRFTKFLTMVAEELDKECKELFEGL 1412
HNCV +++Q+E G GE + V Y ALF NILHRMRF KFL +V+EELDKEC+E+ EGL
Sbjct: 61 HNCVQAFAIQQEVGFGEAPRVVTQYMALFHNILHRMRFAKFLAIVSEELDKECEEILEGL 120
Query: 1411 MQHGRLSLEQLILRAIPEPDQGNIALQDGIRASFGKLVDAHYVERCPDFKPSIPIPPQDG 1232
+QHGRL+LEQ++ RA +G +QD +R SF KLV AH+VERCP +P + PP +
Sbjct: 121 LQHGRLTLEQILDRAKSNQSEGEPVVQDALRESFLKLVRAHFVERCPASEPFLA-PPSEE 179
Query: 1231 TTSTARRGAKSSKIADQREKTQEQQAIAMASCSEGRRFDITMNYGTDVKSGARIEGNAPI 1052
T +RGAKS+K+ ++ + T EQ+AIA A+ + +RF + +N GTDV + + +
Sbjct: 180 ETPARKRGAKSAKLVEEPQ-TIEQRAIAAAAPMDAKRFSVIINTGTDV------DDSPNV 232
Query: 1051 SIGEKRKHEEIESEHDW----EKKDLWRVNFDEFVRRLRHKACVTSVRSQLDEGAGTVLN 884
+ GEKRK + +E + + EK LWR NF+EFVR LRHKAC+ +V+++LD+GA VL+
Sbjct: 233 TAGEKRKQDALELDKETGASCEKDVLWRANFEEFVRCLRHKACIANVKTRLDDGAAIVLS 292
Query: 883 AILETTRRAEKKVKTEITDPLSINTIYQEVINREEGRTMDLEHVRTALVQLEC----RVE 716
A+LE TR EKKVKTE + PLS++TI++ V+ E GR+M LE VR +L+QL C R
Sbjct: 293 AMLEATRSEEKKVKTENSVPLSMDTIFEGVMKSEAGRSMTLERVRGSLIQLGCAPCVRGA 352
Query: 715 KEAYRVDLKSIIETAQNMEVESIVEKRYGEYACRIYRYLSRTGHLAETDKIADTTFLEKQ 536
E+Y VDLK+IIE AQN EVESI KRYG A RI+R LS++ L ETDKI+DTTF+EK+
Sbjct: 353 AESYSVDLKNIIELAQNDEVESITLKRYGRDAYRIFRLLSKSCRLLETDKISDTTFVEKK 412
Query: 535 DALKLLYTLWENRYLEKEKIILSGPTQAQKMLWKVIKCPLWEIVLDEMHHAALNLNQRMA 356
D K+LY LW++ YL+ EK+ L G Q+Q +LWKV K LW VL+EM+H+ALNL+ R+A
Sbjct: 413 DTAKILYQLWKDEYLQMEKLNLHGSRQSQFLLWKVTKDTLWGHVLNEMYHSALNLSLRVA 472
Query: 355 YELEQEHEIRNLPKEKRVGELGKRFERIRRVKILMESSLMKLDDAIMLFHDF 200
YELEQE EI LP+EKRVG LG RFER+R+V+IL+ESSLMKLDDAIMLF+DF
Sbjct: 473 YELEQEQEIIQLPREKRVGALGNRFERLRKVRILLESSLMKLDDAIMLFNDF 524
>ref|XP_010035145.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc3 [Eucalyptus
grandis]
Length = 522
Score = 517 bits (1331), Expect = e-143
Identities = 273/525 (52%), Positives = 372/525 (70%), Gaps = 4/525 (0%)
Frame = -1
Query: 1762 QNGIKLASSLIYENFADLVGKVCDCLLRKGALTLPELTRFTELPSQQVKNCLLVLIQHNC 1583
Q GIK A +I +F DLV KVC+CLLR+G LT + RFTE+ + QVKNCLLVLIQ NC
Sbjct: 6 QYGIKYAGHIISSHFGDLVAKVCECLLRRGPLTHQNIVRFTEMSASQVKNCLLVLIQQNC 65
Query: 1582 VLDYSVQKEGGIGEQDKWVVHYAALFDNILHRMRFTKFLTMVAEELDKECKELFEGLMQH 1403
V +SV+ GG+G+ + Y ALFDNI+HRMRF KF+ +V++ELDKEC ELF+GL+QH
Sbjct: 66 VQAFSVEHPGGVGDTSRRSTEYLALFDNIIHRMRFPKFVAVVSQELDKECVELFQGLLQH 125
Query: 1402 GRLSLEQLILRAIPEPDQGNIALQDGIRASFGKLVDAHYVERCPDFKPSIPIPPQDGTTS 1223
GRL+LE++I RA + Q + QD R + KL +A +VE CPD +P + P ++ +
Sbjct: 126 GRLTLEKMIDRA--KSGQEDSTAQDATREALSKLANARFVEHCPDPEPHLSPPSEE---A 180
Query: 1222 TARRGAKSSKIADQREKTQEQQAIAMASCSEGRRFDITMNYGTDVKSGARIEGNAPISIG 1043
AR+ KSSK+ + E T E++ +A A+ E +RF I + T + + G++ + +G
Sbjct: 181 PARKRTKSSKMVAEPE-TIEERVLAAATPMEAKRFLII--FDTTTEEDGQKTGDSFLGVG 237
Query: 1042 EKRKHEEIESEHDWE---KKDLWRVNFDEFVRRLRHKACVTSVRSQLDEGAGTVLNAILE 872
EKRK + +ES + ++ LWRVN EF+ R RHKACV +VR +LD GA L+A+LE
Sbjct: 238 EKRKSDALESNKELGSDGEQVLWRVNVQEFMHRFRHKACVENVRERLDGGAAVALSAMLE 297
Query: 871 TTRRAEKKVKTEITDPLSINTIYQEVINREEGRTMDLEHVRTALVQLEC-RVEKEAYRVD 695
++ EKKVKT+ + PLSINTIY+EV+ E GR M L+H+R +LV L C + E+Y++D
Sbjct: 298 ISKSMEKKVKTDNSVPLSINTIYEEVMKGEAGRAMTLDHLRASLVMLGCEKGVDESYKID 357
Query: 694 LKSIIETAQNMEVESIVEKRYGEYACRIYRYLSRTGHLAETDKIADTTFLEKQDALKLLY 515
LK+IIE AQN EVESIV KRYG+ A RI+R LS+ L ET KI+DT F++K++ K+L+
Sbjct: 358 LKNIIEQAQNEEVESIVLKRYGQEAYRIFRLLSKANCLLETGKISDTAFVDKKEISKILF 417
Query: 514 TLWENRYLEKEKIILSGPTQAQKMLWKVIKCPLWEIVLDEMHHAALNLNQRMAYELEQEH 335
LW++++L EKI+++GP Q Q +LWKV K LW VLDEM+HA LNLN R+AYELE+E+
Sbjct: 418 RLWKDQFLHMEKIVVTGPRQTQFLLWKVDKTTLWPHVLDEMYHAVLNLNLRVAYELEKEN 477
Query: 334 EIRNLPKEKRVGELGKRFERIRRVKILMESSLMKLDDAIMLFHDF 200
E+ NLP EKR G L KR+ R+R V++L+ESSLMKLDDAIMLFHDF
Sbjct: 478 ELLNLPIEKRSGPLEKRYNRLRTVRLLLESSLMKLDDAIMLFHDF 522
>gb|KCW46437.1| hypothetical protein EUGRSUZ_K00269 [Eucalyptus grandis]
gi|629079993|gb|KCW46438.1| hypothetical protein
EUGRSUZ_K00269 [Eucalyptus grandis]
Length = 554
Score = 517 bits (1331), Expect = e-143
Identities = 273/525 (52%), Positives = 372/525 (70%), Gaps = 4/525 (0%)
Frame = -1
Query: 1762 QNGIKLASSLIYENFADLVGKVCDCLLRKGALTLPELTRFTELPSQQVKNCLLVLIQHNC 1583
Q GIK A +I +F DLV KVC+CLLR+G LT + RFTE+ + QVKNCLLVLIQ NC
Sbjct: 38 QYGIKYAGHIISSHFGDLVAKVCECLLRRGPLTHQNIVRFTEMSASQVKNCLLVLIQQNC 97
Query: 1582 VLDYSVQKEGGIGEQDKWVVHYAALFDNILHRMRFTKFLTMVAEELDKECKELFEGLMQH 1403
V +SV+ GG+G+ + Y ALFDNI+HRMRF KF+ +V++ELDKEC ELF+GL+QH
Sbjct: 98 VQAFSVEHPGGVGDTSRRSTEYLALFDNIIHRMRFPKFVAVVSQELDKECVELFQGLLQH 157
Query: 1402 GRLSLEQLILRAIPEPDQGNIALQDGIRASFGKLVDAHYVERCPDFKPSIPIPPQDGTTS 1223
GRL+LE++I RA + Q + QD R + KL +A +VE CPD +P + P ++ +
Sbjct: 158 GRLTLEKMIDRA--KSGQEDSTAQDATREALSKLANARFVEHCPDPEPHLSPPSEE---A 212
Query: 1222 TARRGAKSSKIADQREKTQEQQAIAMASCSEGRRFDITMNYGTDVKSGARIEGNAPISIG 1043
AR+ KSSK+ + E T E++ +A A+ E +RF I + T + + G++ + +G
Sbjct: 213 PARKRTKSSKMVAEPE-TIEERVLAAATPMEAKRFLII--FDTTTEEDGQKTGDSFLGVG 269
Query: 1042 EKRKHEEIESEHDWE---KKDLWRVNFDEFVRRLRHKACVTSVRSQLDEGAGTVLNAILE 872
EKRK + +ES + ++ LWRVN EF+ R RHKACV +VR +LD GA L+A+LE
Sbjct: 270 EKRKSDALESNKELGSDGEQVLWRVNVQEFMHRFRHKACVENVRERLDGGAAVALSAMLE 329
Query: 871 TTRRAEKKVKTEITDPLSINTIYQEVINREEGRTMDLEHVRTALVQLEC-RVEKEAYRVD 695
++ EKKVKT+ + PLSINTIY+EV+ E GR M L+H+R +LV L C + E+Y++D
Sbjct: 330 ISKSMEKKVKTDNSVPLSINTIYEEVMKGEAGRAMTLDHLRASLVMLGCEKGVDESYKID 389
Query: 694 LKSIIETAQNMEVESIVEKRYGEYACRIYRYLSRTGHLAETDKIADTTFLEKQDALKLLY 515
LK+IIE AQN EVESIV KRYG+ A RI+R LS+ L ET KI+DT F++K++ K+L+
Sbjct: 390 LKNIIEQAQNEEVESIVLKRYGQEAYRIFRLLSKANCLLETGKISDTAFVDKKEISKILF 449
Query: 514 TLWENRYLEKEKIILSGPTQAQKMLWKVIKCPLWEIVLDEMHHAALNLNQRMAYELEQEH 335
LW++++L EKI+++GP Q Q +LWKV K LW VLDEM+HA LNLN R+AYELE+E+
Sbjct: 450 RLWKDQFLHMEKIVVTGPRQTQFLLWKVDKTTLWPHVLDEMYHAVLNLNLRVAYELEKEN 509
Query: 334 EIRNLPKEKRVGELGKRFERIRRVKILMESSLMKLDDAIMLFHDF 200
E+ NLP EKR G L KR+ R+R V++L+ESSLMKLDDAIMLFHDF
Sbjct: 510 ELLNLPIEKRSGPLEKRYNRLRTVRLLLESSLMKLDDAIMLFHDF 554
>ref|XP_007038704.1| RNA polymerase III subunit RPC82 family protein, putative isoform 1
[Theobroma cacao] gi|508775949|gb|EOY23205.1| RNA
polymerase III subunit RPC82 family protein, putative
isoform 1 [Theobroma cacao]
Length = 523
Score = 511 bits (1316), Expect = e-141
Identities = 279/532 (52%), Positives = 370/532 (69%), Gaps = 8/532 (1%)
Frame = -1
Query: 1771 MVLQNGIKLASSLIYENFADLVGKVCDCLLRKGALTLPELTRFTELPSQQVKNCLLVLIQ 1592
MV Q+GIK A LI +F DLV KVC+CLLRKG LTL + RFTEL S QVKN LLVLIQ
Sbjct: 1 MVTQHGIKYAVLLITTHFGDLVAKVCECLLRKGPLTLQAIVRFTELTSSQVKNSLLVLIQ 60
Query: 1591 HNCVLDYSVQKEGGIGEQDKWVVHYAALFDNILHRMRFTKFLTMVAEELDKECKELFEGL 1412
HNCV + +++ G G+ K Y ALF+NI+HR RF KFLT+V+++LDK+C EL E L
Sbjct: 61 HNCVQAFILEQPGSHGDGAKLNSQYIALFNNIIHRWRFPKFLTIVSQKLDKQCVELIEAL 120
Query: 1411 MQHGRLSLEQLILRAIPEPDQGNIALQDGIRASFGKLVDAHYVERCPDFKPSIPIPPQDG 1232
+ HGRL+L+Q+ RA ++G+ + D +R +F KL++AH+VERCP +P + P ++
Sbjct: 121 LLHGRLTLKQMSDRAKSAQNEGDDVILDAVREAFIKLLNAHFVERCPAAEPVLTKPTEE- 179
Query: 1231 TTSTARRGAKSSKIADQREKTQEQQAIAMASCSEGRRFDITMNYGTDVKSGARIEGNAPI 1052
TS +R KS+KI + +E T EQ+ + A+ SE RF + G ++ +
Sbjct: 180 ETSARKRVPKSAKILEGKE-TLEQRVLEAATPSEALRFLLVTRTEPAADGGKDENNSSSM 238
Query: 1051 SIGEKRKHEEIESEHDWEKKD----LWRVNFDEFVRRLRHKACVTSVRSQLDEGAGTVLN 884
++G+KRK + +ESE + E D LWR NF+EF+RRLRHKA + +VR+ LD+GA V++
Sbjct: 239 TVGKKRKLDALESETEGEATDEQVVLWRANFEEFIRRLRHKAFIENVRACLDDGAVIVIS 298
Query: 883 AILETTRRAEKKVKTEITDPLSINTIYQEVINREEGRTMDLEHVRTALVQLEC----RVE 716
A+LE TR AEKKVKTE + PLS+N+IY+EVI EEGR + + VR +LVQL C +
Sbjct: 299 AMLEATRTAEKKVKTENSVPLSLNSIYEEVIKSEEGRNITFDRVRASLVQLSCPPFVKAV 358
Query: 715 KEAYRVDLKSIIETAQNMEVESIVEKRYGEYACRIYRYLSRTGHLAETDKIADTTFLEKQ 536
E+Y +D K IIE AQN EVESIV KRYG A R++R LS T L ETDKIADT F+EK+
Sbjct: 359 NESYSIDFKKIIELAQNDEVESIVLKRYGRDAYRMFRLLSSTARLLETDKIADTAFVEKK 418
Query: 535 DALKLLYTLWENRYLEKEKIILSGPTQAQKMLWKVIKCPLWEIVLDEMHHAALNLNQRMA 356
D K+LY LW++ YL EK+ L+G Q+Q +LWKV K LWE VLDEM HAALNL+ R+A
Sbjct: 419 DTTKILYKLWKDDYLHMEKLQLTGARQSQFLLWKVNKNTLWEHVLDEMFHAALNLSLRVA 478
Query: 355 YELEQEHEIRNLPKEKRVGELGKRFERIRRVKILMESSLMKLDDAIMLFHDF 200
+ELEQE E+ NLP++KRV R+R+V++L+ESS MKLDDAIMLFHDF
Sbjct: 479 HELEQEKELLNLPQDKRV-------NRLRKVRLLLESSQMKLDDAIMLFHDF 523
>ref|XP_006421933.1| hypothetical protein CICLE_v10004721mg [Citrus clementina]
gi|568874593|ref|XP_006490399.1| PREDICTED: DNA-directed
RNA polymerase III subunit RPC3-like isoform X1 [Citrus
sinensis] gi|557523806|gb|ESR35173.1| hypothetical
protein CICLE_v10004721mg [Citrus clementina]
gi|641833010|gb|KDO52033.1| hypothetical protein
CISIN_1g009725mg [Citrus sinensis]
Length = 527
Score = 496 bits (1278), Expect = e-137
Identities = 264/532 (49%), Positives = 367/532 (68%), Gaps = 8/532 (1%)
Frame = -1
Query: 1771 MVLQNGIKLASSLIYENFADLVGKVCDCLLRKGALTLPELTRFTELPSQQVKNCLLVLIQ 1592
M+ + G K A +I +F DLV KVC+CLLRKG LT + R+TEL +QVKN LLVLIQ
Sbjct: 1 MLTEYGTKHAVHVITNHFGDLVAKVCECLLRKGPLTRQNVKRYTELSDEQVKNALLVLIQ 60
Query: 1591 HNCVLDYSVQKEGGIGEQDKWVVHYAALFDNILHRMRFTKFLTMVAEELDKECKELFEGL 1412
NCV ++ ++ G + K Y LFDNILHR+RF KFLT++++E D++C EL +GL
Sbjct: 61 QNCVQAFTTEQPDGFADGPKANTQYVVLFDNILHRVRFAKFLTILSQEFDQQCVELVQGL 120
Query: 1411 MQHGRLSLEQLILRAIPEPDQGNIALQDGIRASFGKLVDAHYVERCPDFKPSI-PIPPQD 1235
++HGRL+L+Q+ RA +GN+ D +R + KLV AHYVERCP +P + PI ++
Sbjct: 121 LEHGRLTLKQMFDRAKSSEKEGNLVDLDSLRETLVKLVTAHYVERCPASEPLLMPISEEE 180
Query: 1234 GTTSTARRGAKSSKIADQREKTQEQQAIAMASCSEGRRFDITMNYGTDVKSGARIEGNAP 1055
G ++G+KS+K + E T EQQ + A E RF + N +DV G + + +
Sbjct: 181 GPAR--KKGSKSAKKIGEPE-TIEQQVVEAALPMEAMRFSVVTNVESDV--GEKEKNSNN 235
Query: 1054 ISIGEKRKHEEIESEHDW---EKKDLWRVNFDEFVRRLRHKACVTSVRSQLDEGAGTVLN 884
++ GEKRKH+ +E + E+ ++R NF+ F+RRLRHK C+ VR+ LD+GA VL+
Sbjct: 236 VTPGEKRKHDVLELDECGVADEQSVVYRANFEGFIRRLRHKGCIDHVRAHLDDGAANVLS 295
Query: 883 AILETTRRAEKKVKTEITDPLSINTIYQEVINREEGRTMDLEHVRTALVQLE----CRVE 716
A+L+ T AEKKVKT+ + PLS+++IY+EVI E GR M L+HVR +LVQL
Sbjct: 296 AMLQATSSAEKKVKTKNSVPLSLSSIYEEVIKSEAGRNMTLDHVRASLVQLGELSFVDAS 355
Query: 715 KEAYRVDLKSIIETAQNMEVESIVEKRYGEYACRIYRYLSRTGHLAETDKIADTTFLEKQ 536
++Y +D + IIE AQN EVES+V KRYG A RI+R LS++G L ETDKI+DTTF+EK+
Sbjct: 356 SDSYSIDFEKIIEIAQNEEVESVVSKRYGRDAYRIFRLLSKSGRLLETDKISDTTFVEKK 415
Query: 535 DALKLLYTLWENRYLEKEKIILSGPTQAQKMLWKVIKCPLWEIVLDEMHHAALNLNQRMA 356
DA K+LY LW++ YL EK++++G Q+Q +LWKV + LW+ VLDEM HAALNL+ R++
Sbjct: 416 DAPKILYKLWKDGYLLMEKLVVTGARQSQFLLWKVNRQILWKHVLDEMFHAALNLSLRVS 475
Query: 355 YELEQEHEIRNLPKEKRVGELGKRFERIRRVKILMESSLMKLDDAIMLFHDF 200
YEL++E E+ NLP +KR G L R+ RIR+V+IL+ESS MKLDDAI+LFHDF
Sbjct: 476 YELDREKELLNLPADKRTGPLQDRYNRIRKVRILLESSQMKLDDAILLFHDF 527
>ref|XP_006490400.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC3-like isoform
X2 [Citrus sinensis] gi|641833009|gb|KDO52032.1|
hypothetical protein CISIN_1g009725mg [Citrus sinensis]
Length = 512
Score = 491 bits (1264), Expect = e-135
Identities = 263/528 (49%), Positives = 363/528 (68%), Gaps = 4/528 (0%)
Frame = -1
Query: 1771 MVLQNGIKLASSLIYENFADLVGKVCDCLLRKGALTLPELTRFTELPSQQVKNCLLVLIQ 1592
M+ + G K A +I +F DLV KVC+CLLRKG LT + R+TEL +QVKN LLVLIQ
Sbjct: 1 MLTEYGTKHAVHVITNHFGDLVAKVCECLLRKGPLTRQNVKRYTELSDEQVKNALLVLIQ 60
Query: 1591 HNCVLDYSVQKEGGIGEQDKWVVHYAALFDNILHRMRFTKFLTMVAEELDKECKELFEGL 1412
NCV ++ ++ G + K Y LFDNILHR+RF KFLT++++E D++C EL +GL
Sbjct: 61 QNCVQAFTTEQPDGFADGPKANTQYVVLFDNILHRVRFAKFLTILSQEFDQQCVELVQGL 120
Query: 1411 MQHGRLSLEQLILRAIPEPDQGNIALQDGIRASFGKLVDAHYVERCPDFKPSI-PIPPQD 1235
++HGRL+L+Q+ RA +GN+ D +R + KLV AHYVERCP +P + PI ++
Sbjct: 121 LEHGRLTLKQMFDRAKSSEKEGNLVDLDSLRETLVKLVTAHYVERCPASEPLLMPISEEE 180
Query: 1234 GTTSTARRGAKSSKIADQREKTQEQQAIAMASCSEGRRFDITMNYGTDVKSGARIEGNAP 1055
G ++G+KS+K + E T EQQ + A E RF + N +DV G + + +
Sbjct: 181 GPAR--KKGSKSAKKIGEPE-TIEQQVVEAALPMEAMRFSVVTNVESDV--GEKEKNSNN 235
Query: 1054 ISIGEKRKHEEIESEHDW---EKKDLWRVNFDEFVRRLRHKACVTSVRSQLDEGAGTVLN 884
++ GEKRKH+ +E + E+ ++R NF+ F+RRLRHK C+ VR+ LD+GA VL+
Sbjct: 236 VTPGEKRKHDVLELDECGVADEQSVVYRANFEGFIRRLRHKGCIDHVRAHLDDGAANVLS 295
Query: 883 AILETTRRAEKKVKTEITDPLSINTIYQEVINREEGRTMDLEHVRTALVQLECRVEKEAY 704
A+L+ T AEKKVKT+ + PLS+++IY+EVI E GR M L+HVR +LVQL
Sbjct: 296 AMLQATSSAEKKVKTKNSVPLSLSSIYEEVIKSEAGRNMTLDHVRASLVQL--------- 346
Query: 703 RVDLKSIIETAQNMEVESIVEKRYGEYACRIYRYLSRTGHLAETDKIADTTFLEKQDALK 524
D + IIE AQN EVES+V KRYG A RI+R LS++G L ETDKI+DTTF+EK+DA K
Sbjct: 347 --DFEKIIEIAQNEEVESVVSKRYGRDAYRIFRLLSKSGRLLETDKISDTTFVEKKDAPK 404
Query: 523 LLYTLWENRYLEKEKIILSGPTQAQKMLWKVIKCPLWEIVLDEMHHAALNLNQRMAYELE 344
+LY LW++ YL EK++++G Q+Q +LWKV + LW+ VLDEM HAALNL+ R++YEL+
Sbjct: 405 ILYKLWKDGYLLMEKLVVTGARQSQFLLWKVNRQILWKHVLDEMFHAALNLSLRVSYELD 464
Query: 343 QEHEIRNLPKEKRVGELGKRFERIRRVKILMESSLMKLDDAIMLFHDF 200
+E E+ NLP +KR G L R+ RIR+V+IL+ESS MKLDDAI+LFHDF
Sbjct: 465 REKELLNLPADKRTGPLQDRYNRIRKVRILLESSQMKLDDAILLFHDF 512
>gb|KDO52031.1| hypothetical protein CISIN_1g009725mg [Citrus sinensis]
Length = 523
Score = 491 bits (1263), Expect = e-135
Identities = 264/532 (49%), Positives = 366/532 (68%), Gaps = 8/532 (1%)
Frame = -1
Query: 1771 MVLQNGIKLASSLIYENFADLVGKVCDCLLRKGALTLPELTRFTELPSQQVKNCLLVLIQ 1592
M+ + G K A +I +F DLV KVC+CLLRKG LT + R+TEL +QVKN LLVLIQ
Sbjct: 1 MLTEYGTKHAVHVITNHFGDLVAKVCECLLRKGPLTRQNVKRYTELSDEQVKNALLVLIQ 60
Query: 1591 HNCVLDYSVQKEGGIGEQDKWVVHYAALFDNILHRMRFTKFLTMVAEELDKECKELFEGL 1412
NCV ++ ++ G K Y LFDNILHR+RF KFLT++++E D++C EL +GL
Sbjct: 61 QNCVQAFTTEQPDG----PKANTQYVVLFDNILHRVRFAKFLTILSQEFDQQCVELVQGL 116
Query: 1411 MQHGRLSLEQLILRAIPEPDQGNIALQDGIRASFGKLVDAHYVERCPDFKPSI-PIPPQD 1235
++HGRL+L+Q+ RA +GN+ D +R + KLV AHYVERCP +P + PI ++
Sbjct: 117 LEHGRLTLKQMFDRAKSSEKEGNLVDLDSLRETLVKLVTAHYVERCPASEPLLMPISEEE 176
Query: 1234 GTTSTARRGAKSSKIADQREKTQEQQAIAMASCSEGRRFDITMNYGTDVKSGARIEGNAP 1055
G ++G+KS+K + E T EQQ + A E RF + N +DV G + + +
Sbjct: 177 GPAR--KKGSKSAKKIGEPE-TIEQQVVEAALPMEAMRFSVVTNVESDV--GEKEKNSNN 231
Query: 1054 ISIGEKRKHEEIESEHDW---EKKDLWRVNFDEFVRRLRHKACVTSVRSQLDEGAGTVLN 884
++ GEKRKH+ +E + E+ ++R NF+ F+RRLRHK C+ VR+ LD+GA VL+
Sbjct: 232 VTPGEKRKHDVLELDECGVADEQSVVYRANFEGFIRRLRHKGCIDHVRAHLDDGAANVLS 291
Query: 883 AILETTRRAEKKVKTEITDPLSINTIYQEVINREEGRTMDLEHVRTALVQLE----CRVE 716
A+L+ T AEKKVKT+ + PLS+++IY+EVI E GR M L+HVR +LVQL
Sbjct: 292 AMLQATSSAEKKVKTKNSVPLSLSSIYEEVIKSEAGRNMTLDHVRASLVQLGELSFVDAS 351
Query: 715 KEAYRVDLKSIIETAQNMEVESIVEKRYGEYACRIYRYLSRTGHLAETDKIADTTFLEKQ 536
++Y +D + IIE AQN EVES+V KRYG A RI+R LS++G L ETDKI+DTTF+EK+
Sbjct: 352 SDSYSIDFEKIIEIAQNEEVESVVSKRYGRDAYRIFRLLSKSGRLLETDKISDTTFVEKK 411
Query: 535 DALKLLYTLWENRYLEKEKIILSGPTQAQKMLWKVIKCPLWEIVLDEMHHAALNLNQRMA 356
DA K+LY LW++ YL EK++++G Q+Q +LWKV + LW+ VLDEM HAALNL+ R++
Sbjct: 412 DAPKILYKLWKDGYLLMEKLVVTGARQSQFLLWKVNRQILWKHVLDEMFHAALNLSLRVS 471
Query: 355 YELEQEHEIRNLPKEKRVGELGKRFERIRRVKILMESSLMKLDDAIMLFHDF 200
YEL++E E+ NLP +KR G L R+ RIR+V+IL+ESS MKLDDAI+LFHDF
Sbjct: 472 YELDREKELLNLPADKRTGPLQDRYNRIRKVRILLESSQMKLDDAILLFHDF 523
>ref|XP_004240730.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC3 [Solanum
lycopersicum]
Length = 525
Score = 489 bits (1259), Expect = e-135
Identities = 265/532 (49%), Positives = 358/532 (67%), Gaps = 8/532 (1%)
Frame = -1
Query: 1771 MVLQNGIKLASSLIYENFADLVGKVCDCLLRKGALTLPELTRFTELPSQQVKNCLLVLIQ 1592
MV +GIKLA LI F +L KVCDCLLR+G TL ++ TEL + VKNCLLVLI
Sbjct: 1 MVSPHGIKLAVYLISSYFGELNAKVCDCLLRRGTQTLHQVVSSTELSRKNVKNCLLVLIH 60
Query: 1591 HNCVLDYSVQKEGGIGEQDKWVVHYAALFDNILHRMRFTKFLTMVAEELDKECKELFEGL 1412
HNCV +++++ GG GE+ K + Y ALFDNI+H++RF KF+ +V+EEL KEC+E+ E L
Sbjct: 61 HNCVQAFAIRQPGGFGEEAKIITQYMALFDNIIHKLRFPKFIEIVSEELGKECEEILEWL 120
Query: 1411 MQHGRLSLEQLILRAIPEPDQGNIALQDGIRASFGKLVDAHYVERCPDFKPSIPIPPQDG 1232
+QHGRLSL Q+I++ QG+ + D + SF +LV+A +VERCP P + PP +
Sbjct: 121 LQHGRLSLSQIIVKYKQASKQGDSSA-DAAQDSFNRLVNARFVERCPAPDPLLE-PPAEE 178
Query: 1231 TTSTARRGAKSSKIADQREKTQEQQAIAMASCSEGRRFDITMNYGTDVKSGARIEGNAPI 1052
T+ +RGAKS+KI Q T EQQA+A A+ E RF + + V+ + +
Sbjct: 179 ETAAKKRGAKSAKIQAQ---TMEQQALAAAAPMESMRFLVENIWNDSVEKADK--RTTDV 233
Query: 1051 SIGEKRKHEEIESEHD----WEKKDLWRVNFDEFVRRLRHKACVTSVRSQLDEGAGTVLN 884
G KRK E++ES EK+ LWR NF+EF+RRLRHKACV +V+ +++ A VL
Sbjct: 234 KCGMKRKQEDLESNTKDPATGEKEVLWRANFEEFIRRLRHKACVANVKVRVNNDAAIVLA 293
Query: 883 AILETTRRAEKKVKTEITDPLSINTIYQEVINREEGRTMDLEHVRTALVQLECRVE---- 716
A LE +R +E K++ + + P SIN IY EVI RE G MDLE +R +L L C
Sbjct: 294 ATLELSRHSETKLRIDNSVPQSINAIYDEVIKREGGLGMDLERIRASLDDLGCEAPLMEI 353
Query: 715 KEAYRVDLKSIIETAQNMEVESIVEKRYGEYACRIYRYLSRTGHLAETDKIADTTFLEKQ 536
E Y VDLK+IIE A+ EVESIV KRYG A R++R LS+ L ETDKI+DTTF+EK+
Sbjct: 354 DETYSVDLKNIIEQARIEEVESIVLKRYGREAYRMFRLLSKADRLVETDKISDTTFVEKK 413
Query: 535 DALKLLYTLWENRYLEKEKIILSGPTQAQKMLWKVIKCPLWEIVLDEMHHAALNLNQRMA 356
DA+K+L+ LW++ YLE +K+I P Q++ +LWK+ K LWE +LDEM+HAALNL R
Sbjct: 414 DAVKILFKLWKDDYLEMKKVIARAPKQSEFILWKINKQSLWEHILDEMYHAALNLRLRTT 473
Query: 355 YELEQEHEIRNLPKEKRVGELGKRFERIRRVKILMESSLMKLDDAIMLFHDF 200
+E EQE EI +PK+K VGELG ++ R+R+V I++ESSLM LDD++MLFHDF
Sbjct: 474 HEKEQEKEILQMPKDKLVGELGNKYMRLRKVCIVLESSLMNLDDSLMLFHDF 525
>emb|CDP05190.1| unnamed protein product [Coffea canephora]
Length = 618
Score = 484 bits (1247), Expect = e-133
Identities = 261/533 (48%), Positives = 359/533 (67%), Gaps = 9/533 (1%)
Frame = -1
Query: 1771 MVLQNGIKLASSLIYENFADLVGKVCDCLLRKGALTLPELTRFTELPSQQVKNCLLVLIQ 1592
MV Q+GIKLA L+ + D KVC+CLLR+G LTL ++ RFTEL + V++CLL LI
Sbjct: 1 MVSQHGIKLAVYLVSSFYGDHNSKVCECLLRRGTLTLAQIIRFTELSREIVRHCLLALIH 60
Query: 1591 HNCVLDYSVQKEGGIGEQDKWVVHYAALFDNILHRMRFTKFLTMVAEELDKECKELFEGL 1412
NC+ +S+Q+EG GE K V HY ALFDNI+H MRF KF+ +V +EL E +++FE L
Sbjct: 61 QNCIQAFSIQQEGAFGEAPKVVTHYMALFDNIIHHMRFPKFIAIVKDELGGESEKVFEAL 120
Query: 1411 MQHGRLSLEQLILRAIPEPDQGNIALQDGIRASFGKLVDAHYVERCPDFKPSIPIPPQDG 1232
+QHGRLS Q++ R + D ++ SF KLV+ +VERCP +P + PP D
Sbjct: 121 LQHGRLSFNQIVDREKQTVSKEENFDVDHLKESFNKLVNGRFVERCPAPEPFLA-PPSDE 179
Query: 1231 TTSTARRGAKSSKIADQREKTQEQQAIAMASCSEGRRFDITMNYGTDVKSGARIEGNAPI 1052
T +RGAKS+K+ D E EQ+A+A A+ E RF + +D + E +
Sbjct: 180 ETPAKKRGAKSTKVGDVSESI-EQRALAAAAPMESLRFLAETHNWSDFSDKSSEEKFTSV 238
Query: 1051 SIGEKRKHEEIESE-----HDWEKKDLWRVNFDEFVRRLRHKACVTSVRSQLDEGAGTVL 887
GEKRK + +E++ D +K+ LWRVNF+E +RRLRH+AC+ + +S+L++ G +L
Sbjct: 239 KTGEKRKQDFLETDGGLLDQDEKKEVLWRVNFEELIRRLRHQACIANAKSRLNDECGIIL 298
Query: 886 NAILETTRRAEKKVKTEITDPLSINTIYQEVINREEGRTMDLEHVRTALVQLECRVEK-- 713
AILE TR +E KV T +SIN IY EVI ++ G M+LE +R +LV+L C +
Sbjct: 299 GAILELTRSSESKVNIGSTASVSINDIYDEVIKKKGGLGMNLERIRASLVELGCEMPMLV 358
Query: 712 EAYRVDLKSIIETAQNMEVESIVEKRYGEYACRIYRYLSRTGHLAETDKIADTTFLEKQD 533
E Y +DLKSII+ AQN EVESIV KRYG A R++R+LS++G L ETDKIADTTF+EK+D
Sbjct: 359 EEYSIDLKSIIDMAQNEEVESIVLKRYGREAYRMFRFLSKSGCLHETDKIADTTFVEKKD 418
Query: 532 ALKLLYTLWENRYLEKEKIILSGPTQAQKMLWKVIKCPLWEIVLDEMHHAALNLNQRMAY 353
A+K+LY LW++ YL+ EK+ ++G Q +LWKV + L + VLDEM+HAALNL R+A+
Sbjct: 419 AIKILYKLWKDDYLQMEKVTVNGARQTHFLLWKVNRQSLCQHVLDEMYHAALNLRLRIAH 478
Query: 352 ELEQEHEIRNLPKEK--RVGELGKRFERIRRVKILMESSLMKLDDAIMLFHDF 200
EL+QE EI +PK+K V EL KR+ R+++V I+ ESSLM LDDA+MLFHDF
Sbjct: 479 ELDQEKEILQMPKDKVGEVEELRKRYMRLKKVSIIYESSLMNLDDALMLFHDF 531
>ref|XP_006363319.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc3-like [Solanum
tuberosum]
Length = 525
Score = 484 bits (1247), Expect = e-133
Identities = 265/532 (49%), Positives = 355/532 (66%), Gaps = 8/532 (1%)
Frame = -1
Query: 1771 MVLQNGIKLASSLIYENFADLVGKVCDCLLRKGALTLPELTRFTELPSQQVKNCLLVLIQ 1592
MV +GIKLA LI F DL KVCDCLLR+G TL ++ TEL VKNCLLVLI
Sbjct: 1 MVSPHGIKLAVYLISSYFGDLNAKVCDCLLRRGTQTLYQVVSSTELTRTNVKNCLLVLIH 60
Query: 1591 HNCVLDYSVQKEGGIGEQDKWVVHYAALFDNILHRMRFTKFLTMVAEELDKECKELFEGL 1412
HNCV +++Q+ GG GE+ K + Y ALFDNI+H++RF KF+ +V+EE+ KEC+E+FEGL
Sbjct: 61 HNCVQAFALQQPGGFGEEPKVITQYMALFDNIIHKLRFPKFIEIVSEEMGKECEEIFEGL 120
Query: 1411 MQHGRLSLEQLILRAIPEPDQGNIALQDGIRASFGKLVDAHYVERCPDFKPSIPIPPQDG 1232
+QHGRL+L ++I R QG+ + D R SF LV+A +VERCP P + PP
Sbjct: 121 LQHGRLTLTEIIERYKEASKQGDSSA-DAARDSFNSLVNARFVERCPAPDPLLE-PPAAE 178
Query: 1231 TTSTARRGAKSSKIADQREKTQEQQAIAMASCSEGRRFDITMNYGTDVKSGARIEGNAPI 1052
T+ +RGAKS+KI Q T EQQA+A A+ E RF + + V+ + +
Sbjct: 179 ETAAKKRGAKSAKIQAQ---TMEQQALAAAAPMESMRFLVEDIWNDSVERADK--RTTDV 233
Query: 1051 SIGEKRKHEEIESEHD----WEKKDLWRVNFDEFVRRLRHKACVTSVRSQLDEGAGTVLN 884
G KRK ++ES +K+ LWR NF+EF+RRLRHKACV +V+ +++ A VL
Sbjct: 234 KCGMKRKQGDLESNTKDSATGKKEVLWRANFEEFIRRLRHKACVANVKVRVNNDAAVVLA 293
Query: 883 AILETTRRAEKKVKTEITDPLSINTIYQEVINREEGRTMDLEHVRTALVQLECRVE---- 716
A LE +R +E K++ + + P SIN IY EVI RE G MDLE +R +L L C
Sbjct: 294 ATLELSRHSETKLRIDNSVPQSINAIYDEVIKREGGLGMDLERIRASLDDLGCEAPLMEI 353
Query: 715 KEAYRVDLKSIIETAQNMEVESIVEKRYGEYACRIYRYLSRTGHLAETDKIADTTFLEKQ 536
E Y VDLK+IIE A+ EVESIV KRYG A R++R LS+ L ETDKI+DTTF+EK+
Sbjct: 354 DETYSVDLKNIIEQARIEEVESIVLKRYGREAYRMFRLLSKADRLVETDKISDTTFVEKK 413
Query: 535 DALKLLYTLWENRYLEKEKIILSGPTQAQKMLWKVIKCPLWEIVLDEMHHAALNLNQRMA 356
DA+K+L+ LW++ YLE +K+I Q++ +LWK+ K LWE +LDEM+HAALNL R+
Sbjct: 414 DAVKILFKLWKDDYLEMKKVIARAAKQSEFILWKINKQSLWEHILDEMYHAALNLRLRIT 473
Query: 355 YELEQEHEIRNLPKEKRVGELGKRFERIRRVKILMESSLMKLDDAIMLFHDF 200
+E EQE EI +PK+K VGELG ++ R+R+V I++ESSLM LDD++MLFHDF
Sbjct: 474 HEKEQEKEILQMPKDKLVGELGNKYMRLRKVCIVLESSLMNLDDSLMLFHDF 525
>ref|XP_009767753.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc3 isoform X1
[Nicotiana sylvestris]
Length = 539
Score = 483 bits (1242), Expect = e-133
Identities = 267/544 (49%), Positives = 361/544 (66%), Gaps = 20/544 (3%)
Frame = -1
Query: 1771 MVLQNGIKLASSLIYENFADLVGKVCDCLLRKGALTLPELTRFTELPSQQVKNCLLVLIQ 1592
MV +GIKLA LI F DL KVC+CLL++G +L ++ RFTEL + V+NCLLVLI
Sbjct: 1 MVSPHGIKLAVYLISSYFGDLNAKVCECLLQRGTQSLAQIVRFTELSRENVRNCLLVLIH 60
Query: 1591 HNCVLDYSVQKEGGIGEQDKWVVHYAALFDNILHRMRFTKFLTMVAEELD--------KE 1436
HNCV ++VQ+EG GE K + +Y ALFDNI+H++RF KFL +V+E L KE
Sbjct: 61 HNCVQAFAVQQEGAFGEAPKVITNYMALFDNIIHKLRFPKFLEIVSEVLGEKVGKEGGKE 120
Query: 1435 CKELFEGLMQHGRLSLEQLILRAIPEPDQGNIALQDGIRASFGKLVDAHYVERCPDFKPS 1256
C+E+FEGL+QHGRLSL Q+I R +QG+ + + R +F KLV+A +VERCP +P
Sbjct: 121 CEEIFEGLLQHGRLSLNQIIDRFKQTSNQGDSSAE-AARDNFNKLVNARFVERCPAPEPF 179
Query: 1255 IPIPPQDGTTSTARRGAKSSKIADQREKTQEQQAIAMASCSEGRRFDITMNYGTDVKSGA 1076
+ PP + T+ ++GAKS+KI Q T EQ+A+A A+ E RF + +
Sbjct: 180 LG-PPAEDETAAKKQGAKSAKIVKQ---TIEQRALAAAAPMESMRFLVETVTWNEASVET 235
Query: 1075 RIEGNAPISIGEKRKHEEIESEHDW----EKKDLWRVNFDEFVRRLRHKACVTSVRSQLD 908
+ N +++G KRK + +ES + E K LWR NF+EF+RRLRHKACV +V+ +++
Sbjct: 236 TDKKNTVVTLGTKRKQDNLESNTELLATDENKVLWRANFEEFIRRLRHKACVANVKVRVN 295
Query: 907 EGAGTVLNAILETTRRAEKKVKTEITDPLSINTIYQEVINREEGRTMDLEHVRTALVQLE 728
A VL A LE +R +E KV+ + + P SIN IY EVI R+ G MDLE +R +LV+L
Sbjct: 296 NDAAIVLAATLELSRHSETKVRIDNSVPQSINAIYDEVIKRDGGLGMDLERIRASLVELG 355
Query: 727 CRVE----KEAYRVDLKSIIETAQNMEVESIVEKRYGEYACRIYRYLSRTGHLAETDKIA 560
C E Y VDLK+IIE A+ EVE IV KRYG A R++R LS+ L ETDKI+
Sbjct: 356 CETPLMAIDETYSVDLKNIIEQARIEEVECIVLKRYGREAYRMFRLLSKADRLLETDKIS 415
Query: 559 DTTFLEKQDALKLLYTLWENRYLEKEKIILSGPTQAQKMLWKVIKCPLWEIVLDEMHHAA 380
DTTF+EK+DA K+L+ LW++ YLE +K+I G Q++ +LWK+ K LWE VLDEM+HAA
Sbjct: 416 DTTFVEKKDAAKILFKLWKDDYLEMKKVIARGARQSEFILWKINKQSLWEHVLDEMYHAA 475
Query: 379 LNLNQRMAYELEQEHEIRNLPKEKRV----GELGKRFERIRRVKILMESSLMKLDDAIML 212
LNL R+ +E EQE EI +P+EK V EL R+ R+R+V+I +ESSLM LDDA+ML
Sbjct: 476 LNLRLRITHEQEQEKEILQMPREKLVKELHSELHNRYNRLRKVRITLESSLMNLDDALML 535
Query: 211 FHDF 200
FHDF
Sbjct: 536 FHDF 539
>ref|XP_012090252.1| PREDICTED: uncharacterized protein LOC105648465 [Jatropha curcas]
gi|643706139|gb|KDP22271.1| hypothetical protein
JCGZ_26102 [Jatropha curcas]
Length = 529
Score = 482 bits (1240), Expect = e-133
Identities = 263/531 (49%), Positives = 359/531 (67%), Gaps = 10/531 (1%)
Frame = -1
Query: 1762 QNGIKLASSLIYENFADLVGKVCDCLLRKGALTLPELTRFTELPSQQVKNCLLVLIQHNC 1583
Q+GIK A+ LI +F +LVGKVC+CLLR+G L L + RFT + VKN LLVLIQHNC
Sbjct: 5 QHGIKYAAHLITNHFGNLVGKVCECLLRRGPLNLQAIIRFTGVKETSVKNSLLVLIQHNC 64
Query: 1582 VLDYSVQKEGGIGEQDKWVVHYAALFDNILHRMRFTKFLTMVAEELDKECKELFEGLMQH 1403
V + + + GG+ + K + Y A+FDNILHRMRF+KFL ++++E DK C ++ EGL+QH
Sbjct: 65 VQSFRLIEPGGLNNEPKQITQYIAVFDNILHRMRFSKFLAIISQEFDKLCVDIVEGLLQH 124
Query: 1402 GRLSLEQLILRAIPEPDQGNIALQDGIRASFGKLVDAHYVERCPDFKPSIPIPPQDGTTS 1223
GRL+L+Q++ RA GN D ++ S KLV A YVE CP +P + P +
Sbjct: 125 GRLTLKQIVDRANNYNKTGNSIGLDAVQESLRKLVTARYVEHCPIPEPVLE-PQNEEDAP 183
Query: 1222 TARRGAKSSKIADQREKTQEQQAIAMASCSEGRRFDITMNYGTDVKSGARIEGNAPIS-I 1046
+RGAKS+KI + E T EQ+A+A A E +RF + M+ + G + + +P
Sbjct: 184 AKKRGAKSAKIVVEPE-TLEQRALAAALPMEAKRFSLVMDIELN-DDGEKDQNKSPDKHS 241
Query: 1045 GEKRK----HEEIESEHDWEKKDLWRVNFDEFVRRLRHKACVTSVRSQLDEGAGTVLNAI 878
G+KRK +I+SE ++ LWR NF+EF+RRLRHKACV +V+++LD+GA V++A+
Sbjct: 242 GDKRKLDASEPDIDSETTKDEVVLWRANFEEFIRRLRHKACVENVKARLDDGAAIVVSAM 301
Query: 877 LETTRRAEKKVKTEITDPLSINTIYQEVINREEGRTMDLEHVRTALVQLE-----CRVEK 713
LE ++ EKKVKT + PLS+N+IY+EVI E+GR M +HVR ALVQL RV+
Sbjct: 302 LEASKTEEKKVKTASSVPLSVNSIYEEVIKSEKGRNMTFDHVRAALVQLTSPPSFVRVDD 361
Query: 712 EAYRVDLKSIIETAQNMEVESIVEKRYGEYACRIYRYLSRTGHLAETDKIADTTFLEKQD 533
E+Y +D K IE AQ+ EVESIV KR+G A R++R L + G L ETDKIAD F+EK+D
Sbjct: 362 ESYSIDFKHTIEVAQSDEVESIVLKRHGTDAYRMFRLLLKAGRLLETDKIADAVFVEKKD 421
Query: 532 ALKLLYTLWENRYLEKEKIILSGPTQAQKMLWKVIKCPLWEIVLDEMHHAALNLNQRMAY 353
++LY LW++ YL EK+I A +LWKV K LWE VLDEM HAALNL+ R+AY
Sbjct: 422 TTQILYKLWQDDYLIMEKLIAG---TATFLLWKVNKLVLWEHVLDEMFHAALNLSIRVAY 478
Query: 352 ELEQEHEIRNLPKEKRVGELGKRFERIRRVKILMESSLMKLDDAIMLFHDF 200
ELEQ EI ++P +KR G + K+++ +R+++ILMESS M LDDAIMLFHDF
Sbjct: 479 ELEQNKEILDIPPDKREGPMQKKYDNLRKMRILMESSQMNLDDAIMLFHDF 529
>ref|XP_011076159.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc3 isoform X1
[Sesamum indicum]
Length = 525
Score = 479 bits (1234), Expect = e-132
Identities = 255/533 (47%), Positives = 368/533 (69%), Gaps = 9/533 (1%)
Frame = -1
Query: 1771 MVLQNGIKLASSLIYENFADLVGKVCDCLLRKGALTLPELTRFTELPSQQVKNCLLVLIQ 1592
MV +G++LA+ LI + DL KVC+CLLR+G LTL ++ RFTEL + V NCL VLI
Sbjct: 1 MVSPHGVQLATHLISSFYGDLCSKVCECLLRRGTLTLAQIIRFTELSRENVINCLRVLIH 60
Query: 1591 HNCVLDYSVQKEGGIGEQDKWVVHYAALFDNILHRMRFTKFLTMVAEELDKECKELFEGL 1412
NCV +++Q+EG GE + + Y ALFDN++H+MR KF+ +V+EEL K+C +F+GL
Sbjct: 61 QNCVQAFAIQQEGAFGEAPRIITQYMALFDNMIHKMRAPKFMQIVSEELGKDCLGIFQGL 120
Query: 1411 MQHGRLSLEQLILRAIPEPDQGNIALQDGIRASFGKLVDAHYVERCPDFKPSIPIPPQDG 1232
+QHGRLS+ Q+I R ++ + +R SF +L+ A ++ERCP +P + PP DG
Sbjct: 121 IQHGRLSINQIIDRNEQTAGSADVHV---VRESFNRLLIARFIERCPAPEPFLA-PPADG 176
Query: 1231 TTSTARRGAKSSKIADQREKTQEQQAIAMASCSEGRRFDITMNYGTDVKSGARIEGNAPI 1052
T +RGAKS+KI ++R+ T EQ+A+A A+ + RF + M+ ++ KS E +
Sbjct: 177 ETPAKKRGAKSAKIGEERQTT-EQRALAAAAPMDSMRFLMEMDDPSEEKSE---ECTNSV 232
Query: 1051 SIGEKRKHEEIESEHDW-----EKKDLWRVNFDEFVRRLRHKACVTSVRSQLDEGAGTVL 887
++GEKRK + ++S+ D +K+ LWRVNF+E VRRLRHKACV+ V+ ++++ A VL
Sbjct: 233 TVGEKRKQDVLKSDEDALDADKKKEVLWRVNFEELVRRLRHKACVSYVKMRINDEAAIVL 292
Query: 886 NAILETTRRAEKKVKTEITDPLSINTIYQEVINREEGRTMDLEHVRTALVQLECRVEK-- 713
+A+LE +R +E + K E + LSIN IY EVI +E G MD E +R +L QL C+ +
Sbjct: 293 SAMLELSRHSETRQKAENSAYLSINAIYDEVIKKEGGLGMDFERIRASLEQLGCQCLETG 352
Query: 712 --EAYRVDLKSIIETAQNMEVESIVEKRYGEYACRIYRYLSRTGHLAETDKIADTTFLEK 539
E Y +D+K IIE+AQ EVES+V +RYG A RI+R LS+ G E+DKI+DTTF+EK
Sbjct: 353 VDENYSIDIKGIIESAQTEEVESVVLRRYGREAYRIFRLLSKAGRFLESDKISDTTFVEK 412
Query: 538 QDALKLLYTLWENRYLEKEKIILSGPTQAQKMLWKVIKCPLWEIVLDEMHHAALNLNQRM 359
+D +K+LY LW++ YL EK++ SG Q+ +LW+V K PL E VLDEM+HAALNL R+
Sbjct: 413 KDTIKILYKLWKDDYLHMEKVMTSGAKQSLFLLWRVNKEPLREHVLDEMYHAALNLRLRI 472
Query: 358 AYELEQEHEIRNLPKEKRVGELGKRFERIRRVKILMESSLMKLDDAIMLFHDF 200
A+E ++ EI LP+EK VGEL KR++ + +V++++ESSLM LD+AIMLFHDF
Sbjct: 473 AHEQDKGKEILQLPREKLVGELEKRYKLLGKVRVILESSLMNLDEAIMLFHDF 525
>ref|XP_009627999.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc3 isoform X3
[Nicotiana tomentosiformis]
Length = 535
Score = 479 bits (1233), Expect = e-132
Identities = 264/540 (48%), Positives = 361/540 (66%), Gaps = 16/540 (2%)
Frame = -1
Query: 1771 MVLQNGIKLASSLIYENFADLVGKVCDCLLRKGALTLPELTRFTELPSQQVKNCLLVLIQ 1592
MV +GIKLA LI F DL KVC+CLL++G +L ++ RFTEL + V+NCLLVLI
Sbjct: 1 MVSPHGIKLAVYLISSYFGDLNAKVCECLLQRGTQSLAQIVRFTELSRENVRNCLLVLIH 60
Query: 1591 HNCVLDYSVQKEGGIGEQDKWVVHYAALFDNILHRMRFTKFLTMVAEELD----KECKEL 1424
HNCV ++VQ+EG GE K + +Y ALFDNI+H++RF KFL +V+E L KEC+E+
Sbjct: 61 HNCVQAFAVQQEGAFGEAPKVITNYMALFDNIIHKLRFPKFLEIVSEVLGEKVGKECEEI 120
Query: 1423 FEGLMQHGRLSLEQLILRAIPEPDQGNIALQDGIRASFGKLVDAHYVERCPDFKPSIPIP 1244
FEGL+QHGRLSL Q+I R +QG+ + + R +F KLV+A +VERCP +P + P
Sbjct: 121 FEGLLQHGRLSLNQIIDRFKQTSNQGDSSAE-AARDNFNKLVNARFVERCPAPEPFLG-P 178
Query: 1243 PQDGTTSTARRGAKSSKIADQREKTQEQQAIAMASCSEGRRFDITMNYGTDVKSGARIEG 1064
+ T+ ++GAKS+KI Q T EQ+A+A A+ E RF + + + +
Sbjct: 179 SAEEETAAKKQGAKSAKIVKQ---TIEQRALAAAAPMESMRFLVETDTWNEASVETTDKK 235
Query: 1063 NAPISIGEKRKHEEIESEHDW----EKKDLWRVNFDEFVRRLRHKACVTSVRSQLDEGAG 896
+++G KRK + +ES + E K LWR NF+EF+RRLRHKACV +V+ +++ A
Sbjct: 236 TTVVTLGTKRKQDNLESNTELLATDENKVLWRANFEEFIRRLRHKACVANVKVRVNNDAA 295
Query: 895 TVLNAILETTRRAEKKVKTEITDPLSINTIYQEVINREEGRTMDLEHVRTALVQLECRVE 716
VL A LE +R +E KV+ + + P SIN IY EVI R+ G MDLE +R +LV+L C
Sbjct: 296 IVLAATLELSRHSETKVRIDNSVPQSINAIYDEVIKRDGGLGMDLERIRASLVELGCETP 355
Query: 715 ----KEAYRVDLKSIIETAQNMEVESIVEKRYGEYACRIYRYLSRTGHLAETDKIADTTF 548
E Y VDLK++IE A+ EVESIV KRYG A R++R LS+ L ETDKI+DTTF
Sbjct: 356 LMAIDETYSVDLKNVIEQARIEEVESIVLKRYGREAYRMFRLLSKADRLLETDKISDTTF 415
Query: 547 LEKQDALKLLYTLWENRYLEKEKIILSGPTQAQKMLWKVIKCPLWEIVLDEMHHAALNLN 368
+EK+DA+K+L+ LW++ YLE +K+I G Q++ +LWK+ K LWE VLDEM+HAALNL
Sbjct: 416 VEKKDAVKILFKLWKDDYLEMKKVIARGARQSEFILWKINKQSLWEHVLDEMYHAALNLR 475
Query: 367 QRMAYELEQEHEIRNLPKEKRV----GELGKRFERIRRVKILMESSLMKLDDAIMLFHDF 200
R+ +E EQE EI +P+EK V EL R+ R+R+V+I +ESSLM LDDA+MLF DF
Sbjct: 476 LRITHEQEQEKEILQMPREKLVKELHSELHNRYNRLRKVRITLESSLMNLDDALMLFRDF 535
>ref|XP_009627995.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc3 isoform X2
[Nicotiana tomentosiformis]
Length = 539
Score = 479 bits (1233), Expect = e-132
Identities = 264/544 (48%), Positives = 362/544 (66%), Gaps = 20/544 (3%)
Frame = -1
Query: 1771 MVLQNGIKLASSLIYENFADLVGKVCDCLLRKGALTLPELTRFTELPSQQVKNCLLVLIQ 1592
MV +GIKLA LI F DL KVC+CLL++G +L ++ RFTEL + V+NCLLVLI
Sbjct: 1 MVSPHGIKLAVYLISSYFGDLNAKVCECLLQRGTQSLAQIVRFTELSRENVRNCLLVLIH 60
Query: 1591 HNCVLDYSVQKEGGIGEQDKWVVHYAALFDNILHRMRFTKFLTMVAE--------ELDKE 1436
HNCV ++VQ+EG GE K + +Y ALFDNI+H++RF KFL +V+E E+ KE
Sbjct: 61 HNCVQAFAVQQEGAFGEAPKVITNYMALFDNIIHKLRFPKFLEIVSEVLGEKVGKEVGKE 120
Query: 1435 CKELFEGLMQHGRLSLEQLILRAIPEPDQGNIALQDGIRASFGKLVDAHYVERCPDFKPS 1256
C+E+FEGL+QHGRLSL Q+I R +QG+ + + R +F KLV+A +VERCP +P
Sbjct: 121 CEEIFEGLLQHGRLSLNQIIDRFKQTSNQGDSSAE-AARDNFNKLVNARFVERCPAPEPF 179
Query: 1255 IPIPPQDGTTSTARRGAKSSKIADQREKTQEQQAIAMASCSEGRRFDITMNYGTDVKSGA 1076
+ P + T+ ++GAKS+KI Q T EQ+A+A A+ E RF + + +
Sbjct: 180 LG-PSAEEETAAKKQGAKSAKIVKQ---TIEQRALAAAAPMESMRFLVETDTWNEASVET 235
Query: 1075 RIEGNAPISIGEKRKHEEIESEHDW----EKKDLWRVNFDEFVRRLRHKACVTSVRSQLD 908
+ +++G KRK + +ES + E K LWR NF+EF+RRLRHKACV +V+ +++
Sbjct: 236 TDKKTTVVTLGTKRKQDNLESNTELLATDENKVLWRANFEEFIRRLRHKACVANVKVRVN 295
Query: 907 EGAGTVLNAILETTRRAEKKVKTEITDPLSINTIYQEVINREEGRTMDLEHVRTALVQLE 728
A VL A LE +R +E KV+ + + P SIN IY EVI R+ G MDLE +R +LV+L
Sbjct: 296 NDAAIVLAATLELSRHSETKVRIDNSVPQSINAIYDEVIKRDGGLGMDLERIRASLVELG 355
Query: 727 CRVE----KEAYRVDLKSIIETAQNMEVESIVEKRYGEYACRIYRYLSRTGHLAETDKIA 560
C E Y VDLK++IE A+ EVESIV KRYG A R++R LS+ L ETDKI+
Sbjct: 356 CETPLMAIDETYSVDLKNVIEQARIEEVESIVLKRYGREAYRMFRLLSKADRLLETDKIS 415
Query: 559 DTTFLEKQDALKLLYTLWENRYLEKEKIILSGPTQAQKMLWKVIKCPLWEIVLDEMHHAA 380
DTTF+EK+DA+K+L+ LW++ YLE +K+I G Q++ +LWK+ K LWE VLDEM+HAA
Sbjct: 416 DTTFVEKKDAVKILFKLWKDDYLEMKKVIARGARQSEFILWKINKQSLWEHVLDEMYHAA 475
Query: 379 LNLNQRMAYELEQEHEIRNLPKEKRV----GELGKRFERIRRVKILMESSLMKLDDAIML 212
LNL R+ +E EQE EI +P+EK V EL R+ R+R+V+I +ESSLM LDDA+ML
Sbjct: 476 LNLRLRITHEQEQEKEILQMPREKLVKELHSELHNRYNRLRKVRITLESSLMNLDDALML 535
Query: 211 FHDF 200
F DF
Sbjct: 536 FRDF 539
>ref|XP_009627989.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc3 isoform X1
[Nicotiana tomentosiformis]
Length = 543
Score = 478 bits (1229), Expect = e-131
Identities = 264/548 (48%), Positives = 362/548 (66%), Gaps = 24/548 (4%)
Frame = -1
Query: 1771 MVLQNGIKLASSLIYENFADLVGKVCDCLLRKGALTLPELTRFTELPSQQVKNCLLVLIQ 1592
MV +GIKLA LI F DL KVC+CLL++G +L ++ RFTEL + V+NCLLVLI
Sbjct: 1 MVSPHGIKLAVYLISSYFGDLNAKVCECLLQRGTQSLAQIVRFTELSRENVRNCLLVLIH 60
Query: 1591 HNCVLDYSVQKEGGIGEQDKWVVHYAALFDNILHRMRFTKFLTMVAE------------E 1448
HNCV ++VQ+EG GE K + +Y ALFDNI+H++RF KFL +V+E E
Sbjct: 61 HNCVQAFAVQQEGAFGEAPKVITNYMALFDNIIHKLRFPKFLEIVSEVLGEKVGKEVGKE 120
Query: 1447 LDKECKELFEGLMQHGRLSLEQLILRAIPEPDQGNIALQDGIRASFGKLVDAHYVERCPD 1268
+ KEC+E+FEGL+QHGRLSL Q+I R +QG+ + + R +F KLV+A +VERCP
Sbjct: 121 VGKECEEIFEGLLQHGRLSLNQIIDRFKQTSNQGDSSAE-AARDNFNKLVNARFVERCPA 179
Query: 1267 FKPSIPIPPQDGTTSTARRGAKSSKIADQREKTQEQQAIAMASCSEGRRFDITMNYGTDV 1088
+P + P + T+ ++GAKS+KI Q T EQ+A+A A+ E RF + + +
Sbjct: 180 PEPFLG-PSAEEETAAKKQGAKSAKIVKQ---TIEQRALAAAAPMESMRFLVETDTWNEA 235
Query: 1087 KSGARIEGNAPISIGEKRKHEEIESEHDW----EKKDLWRVNFDEFVRRLRHKACVTSVR 920
+ +++G KRK + +ES + E K LWR NF+EF+RRLRHKACV +V+
Sbjct: 236 SVETTDKKTTVVTLGTKRKQDNLESNTELLATDENKVLWRANFEEFIRRLRHKACVANVK 295
Query: 919 SQLDEGAGTVLNAILETTRRAEKKVKTEITDPLSINTIYQEVINREEGRTMDLEHVRTAL 740
+++ A VL A LE +R +E KV+ + + P SIN IY EVI R+ G MDLE +R +L
Sbjct: 296 VRVNNDAAIVLAATLELSRHSETKVRIDNSVPQSINAIYDEVIKRDGGLGMDLERIRASL 355
Query: 739 VQLECRVE----KEAYRVDLKSIIETAQNMEVESIVEKRYGEYACRIYRYLSRTGHLAET 572
V+L C E Y VDLK++IE A+ EVESIV KRYG A R++R LS+ L ET
Sbjct: 356 VELGCETPLMAIDETYSVDLKNVIEQARIEEVESIVLKRYGREAYRMFRLLSKADRLLET 415
Query: 571 DKIADTTFLEKQDALKLLYTLWENRYLEKEKIILSGPTQAQKMLWKVIKCPLWEIVLDEM 392
DKI+DTTF+EK+DA+K+L+ LW++ YLE +K+I G Q++ +LWK+ K LWE VLDEM
Sbjct: 416 DKISDTTFVEKKDAVKILFKLWKDDYLEMKKVIARGARQSEFILWKINKQSLWEHVLDEM 475
Query: 391 HHAALNLNQRMAYELEQEHEIRNLPKEKRV----GELGKRFERIRRVKILMESSLMKLDD 224
+HAALNL R+ +E EQE EI +P+EK V EL R+ R+R+V+I +ESSLM LDD
Sbjct: 476 YHAALNLRLRITHEQEQEKEILQMPREKLVKELHSELHNRYNRLRKVRITLESSLMNLDD 535
Query: 223 AIMLFHDF 200
A+MLF DF
Sbjct: 536 ALMLFRDF 543
>ref|XP_012484103.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC3 isoform X1
[Gossypium raimondii] gi|763766904|gb|KJB34119.1|
hypothetical protein B456_006G048800 [Gossypium
raimondii]
Length = 517
Score = 476 bits (1225), Expect = e-131
Identities = 268/532 (50%), Positives = 353/532 (66%), Gaps = 8/532 (1%)
Frame = -1
Query: 1771 MVLQNGIKLASSLIYENFADLVGKVCDCLLRKGALTLPELTRFTELPSQQVKNCLLVLIQ 1592
MV Q GIK A +LI +F DLV KVC+CLLR+G LTL + R TEL S QVKN LLVLIQ
Sbjct: 1 MVTQYGIKYAVNLITAHFGDLVAKVCECLLRRGPLTLQAIVRSTELTSSQVKNSLLVLIQ 60
Query: 1591 HNCVLDYSVQKEGGIGEQDKWVVHYAALFDNILHRMRFTKFLTMVAEELDKECKELFEGL 1412
HNCV + + + G G+ K Y ALFDNI+ R RF KFLTMV+++LDK+C EL EGL
Sbjct: 61 HNCVQAFILDQTGEHGDGAKQSTQYIALFDNIIQRWRFPKFLTMVSKKLDKQCVELLEGL 120
Query: 1411 MQHGRLSLEQLILRAIPEPDQGNIALQDGIRASFGKLVDAHYVERCPDFKPSIPIPPQDG 1232
+QHGRL+L+Q+ RA ++G+ D ++ +F KL++AH++ERCP +P + P ++
Sbjct: 121 LQHGRLTLKQMFDRAKSGQNEGD----DVVQEAFVKLLNAHFIERCPASEPVLTNPTKE- 175
Query: 1231 TTSTARRGAKSSKIADQREKTQEQQAIAMASCSEGRRFDITMNYGTDVKSGARIEGNAPI 1052
+ +R AKS KI + +E T EQ+ + A +E RF G ++ +
Sbjct: 176 EEAARKRAAKSGKILEVQE-TLEQRVVEAAMPTEALRFLFATETEPTADGGKDKSNSSSV 234
Query: 1051 SIGEKRKHEEIESEHDWEKKD----LWRVNFDEFVRRLRHKACVTSVRSQLDEGAGTVLN 884
+ GEKRKH+ IESE + D LWR N DEF+R LRHKAC+ +VR++ D+GA V
Sbjct: 235 TPGEKRKHDAIESEAESGDTDEQVVLWRANIDEFIRHLRHKACIENVRARFDDGAVIVFG 294
Query: 883 AILETTRRAEKKVKTEITDPLSINTIYQEVINREEGRTMDLEHVRTALVQLEC----RVE 716
A+LE TR AEKKVKTE + PLS+++IY+EVI EEGR + + VR +LVQL C +
Sbjct: 295 AMLEATRSAEKKVKTENSVPLSLSSIYEEVIKSEEGRNITFDRVRASLVQLSCPPFVKAT 354
Query: 715 KEAYRVDLKSIIETAQNMEVESIVEKRYGEYACRIYRYLSRTGHLAETDKIADTTFLEKQ 536
E+Y VD K IIE AQ+ EVESIV KRYG A R++R LS +GHL ETDK+AD TF+EK+
Sbjct: 355 NESYSVDFKKIIELAQHEEVESIVLKRYGRDAYRMFRLLSNSGHLLETDKVADATFVEKK 414
Query: 535 DALKLLYTLWENRYLEKEKIILSGPTQAQKMLWKVIKCPLWEIVLDEMHHAALNLNQRMA 356
+ +LY LW++ YL+ EK+ + G Q LWKV K L VLDEM HAA NL+QR+A
Sbjct: 415 ETPIILYKLWKDDYLQLEKLQI-GVKQTPFQLWKVNKSTLKVHVLDEMFHAAFNLSQRVA 473
Query: 355 YELEQEHEIRNLPKEKRVGELGKRFERIRRVKILMESSLMKLDDAIMLFHDF 200
+ELEQE E+ N+ ++KRV L KR +L+ESS MKLDDAIMLFHDF
Sbjct: 474 FELEQEKELSNVLQDKRVNRLRKR--------LLLESSQMKLDDAIMLFHDF 517
>gb|KHG02841.1| DNA-directed RNA polymerase III subunit RPC3 [Gossypium arboreum]
Length = 513
Score = 473 bits (1216), Expect = e-130
Identities = 270/532 (50%), Positives = 351/532 (65%), Gaps = 8/532 (1%)
Frame = -1
Query: 1771 MVLQNGIKLASSLIYENFADLVGKVCDCLLRKGALTLPELTRFTELPSQQVKNCLLVLIQ 1592
MV Q GIK A +LI +F DLV KVC+CLLRKG LTL + R TEL S QVKN LLVLIQ
Sbjct: 1 MVTQYGIKYAVNLITAHFGDLVAKVCECLLRKGPLTLQAIVRSTELTSSQVKNSLLVLIQ 60
Query: 1591 HNCVLDYSVQKEGGIGEQDKWVVHYAALFDNILHRMRFTKFLTMVAEELDKECKELFEGL 1412
HNCV + + + G G+ K Y ALFDNI+ R RF KFLTMV+++LDK+C EL EGL
Sbjct: 61 HNCVQAFILDQTGEHGDGAKQSTQYIALFDNIIQRWRFPKFLTMVSKKLDKQCAELLEGL 120
Query: 1411 MQHGRLSLEQLILRAIPEPDQGNIALQDGIRASFGKLVDAHYVERCPDFKPSIPIPPQDG 1232
+QHGRLSL+Q+ RA G+ D ++ +F KL++AH++ERCP +P + P ++
Sbjct: 121 LQHGRLSLKQMFDRA----KSGD----DVVQEAFVKLLNAHFIERCPASEPVLTNPTKE- 171
Query: 1231 TTSTARRGAKSSKIADQREKTQEQQAIAMASCSEGRRFDITMNYGTDVKSGARIEGNAPI 1052
+ +R AKS KI + +E T EQ+ + A +E RF G ++ +
Sbjct: 172 EEAARKRAAKSGKILEVQE-TLEQRVVEAAMPTEALRFLFATETEPTADGGKDKSNSSSV 230
Query: 1051 SIGEKRKHEEIESEHDWEKKD----LWRVNFDEFVRRLRHKACVTSVRSQLDEGAGTVLN 884
+ GEKRKH+ +ESE + D LWR NFDEF+ LRHKAC+ +VR++ D+GA V
Sbjct: 231 TPGEKRKHDALESEAECGATDEQVVLWRANFDEFIWCLRHKACIENVRARFDDGAVIVFG 290
Query: 883 AILETTRRAEKKVKTEITDPLSINTIYQEVINREEGRTMDLEHVRTALVQLEC----RVE 716
A+LE TR AEKKVKTE + PLS+++IY+EVI EEGR + + VR +LVQL C +
Sbjct: 291 AMLEATRSAEKKVKTENSVPLSLSSIYEEVIKSEEGRNITFDRVRASLVQLSCPPFVKAA 350
Query: 715 KEAYRVDLKSIIETAQNMEVESIVEKRYGEYACRIYRYLSRTGHLAETDKIADTTFLEKQ 536
E+Y VD K IIE AQN EVESIV KRYG A R++R LS +GHL ETDK+AD TF+EK+
Sbjct: 351 NESYSVDFKKIIELAQNEEVESIVLKRYGRDAYRMFRLLSNSGHLLETDKVADATFVEKK 410
Query: 535 DALKLLYTLWENRYLEKEKIILSGPTQAQKMLWKVIKCPLWEIVLDEMHHAALNLNQRMA 356
+ +LY LW++ YL+ EK+ + G Q LWKV K L VLDEM HAA NL+QR+A
Sbjct: 411 ETPIILYKLWKDDYLQLEKLQI-GVKQIPFQLWKVNKNTLKVHVLDEMFHAAFNLSQRVA 469
Query: 355 YELEQEHEIRNLPKEKRVGELGKRFERIRRVKILMESSLMKLDDAIMLFHDF 200
+ELEQE E+ N+ ++KRV L KR +L+ESS MKLDDAIMLFHDF
Sbjct: 470 FELEQEKELSNVLQDKRVNRLRKR--------LLLESSQMKLDDAIMLFHDF 513
>ref|XP_011651154.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC3 isoform X1
[Cucumis sativus] gi|700202248|gb|KGN57381.1|
hypothetical protein Csa_3G182170 [Cucumis sativus]
Length = 521
Score = 453 bits (1165), Expect = e-124
Identities = 254/530 (47%), Positives = 352/530 (66%), Gaps = 5/530 (0%)
Frame = -1
Query: 1774 VMVLQNGIKLASSLIYENFADLVGKVCDCLLRKGALTLPELTRFTELPSQQVKNCLLVLI 1595
+++ Q GIK A ++ +F +LV KVC+ LLRKG LTL L RFTEL QV N LL+LI
Sbjct: 1 MVMTQYGIKYAVHIMTAHFGNLVAKVCETLLRKGPLTLRLLIRFTELTPSQVNNSLLILI 60
Query: 1594 QHNCVLDYSVQKEGGIGEQDKWVVHYAALFDNILHRMRFTKFLTMVAEEL--DKECKELF 1421
QHNCV ++ EG G+ K Y ALF NILHRMRF+KF+ + +++L DK C+EL
Sbjct: 61 QHNCVQAFTDVTEGEFGDAPKDDTLYLALFSNILHRMRFSKFVAIASQKLGQDKNCQELL 120
Query: 1420 EGLMQHGRLSLEQLILRAIPEPDQGNIALQDGIRASFGKLVDAHYVERCPDFKPSIPIPP 1241
EGL+Q+GRLS+EQL+ RA GN + D + S KL++AH+VERCP +P++ P
Sbjct: 121 EGLLQNGRLSMEQLVERAESSGRAGNHPISDVVHDSLFKLLNAHFVERCPAPEPTLS--P 178
Query: 1240 QDGTTSTARRGAKSSKIADQREKTQEQQAIAMASCSEGRRFDITMNYGTDVKSGARIEGN 1061
+ +RGAK++KI++ E T EQ+ I A E RF + G + E +
Sbjct: 179 KVEEPPPRKRGAKAAKISEVPE-TLEQRLIEAARPVEVLRFSM----GDTNPEAEKSEHH 233
Query: 1060 APISIGEKRKHEEIESEHDWEKKD---LWRVNFDEFVRRLRHKACVTSVRSQLDEGAGTV 890
+ IS G+KRKH+++E D D LWR N+DEF+R LRHKAC+ VRSQ D+G V
Sbjct: 234 SQIS-GQKRKHDDLEIAQDSGDADGPILWRANYDEFIRCLRHKACIEHVRSQFDDGVVNV 292
Query: 889 LNAILETTRRAEKKVKTEITDPLSINTIYQEVINREEGRTMDLEHVRTALVQLECRVEKE 710
L+AILE TR +EK VKTEIT PLS++ IY+EV+ E GR+M L+ V +L L C +
Sbjct: 293 LSAILEATRSSEKIVKTEITVPLSLDNIYEEVMKNEVGRSMTLDRVEASLAALGCP-GMD 351
Query: 709 AYRVDLKSIIETAQNMEVESIVEKRYGEYACRIYRYLSRTGHLAETDKIADTTFLEKQDA 530
Y+++L+ IIE AQ EVESIV KRYG A R++R+LS+TG L ET+KI+D++F++K +A
Sbjct: 352 DYKINLRRIIEQAQTDEVESIVLKRYGRDAYRMFRFLSKTGGLVETEKISDSSFVDKNEA 411
Query: 529 LKLLYTLWENRYLEKEKIILSGPTQAQKMLWKVIKCPLWEIVLDEMHHAALNLNQRMAYE 350
K+LY LW++ YL EK+ L+ P + +LW+V + LWE VLDEM+HA+LNL R+A+E
Sbjct: 412 PKILYRLWKDEYLYMEKVALTVPRHSLCLLWRVDRYNLWEHVLDEMYHASLNLQLRLAHE 471
Query: 349 LEQEHEIRNLPKEKRVGELGKRFERIRRVKILMESSLMKLDDAIMLFHDF 200
+E+ E+ +LPK+ L K+ V+ L+ SSL+KLDDA+MLFHDF
Sbjct: 472 IEENKELLSLPKDNNNKPLVKKMHHFENVRNLLRSSLVKLDDALMLFHDF 521