BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver30_contig00003497
         (1022 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002278845.1| PREDICTED: mediator of RNA polymerase II tra...   466   e-128
ref|XP_010265228.1| PREDICTED: mediator of RNA polymerase II tra...   461   e-127
ref|XP_012082045.1| PREDICTED: mediator of RNA polymerase II tra...   453   e-124
ref|XP_012082044.1| PREDICTED: mediator of RNA polymerase II tra...   453   e-124
gb|KDO70070.1| hypothetical protein CISIN_1g003284mg [Citrus sin...   449   e-123
gb|KDO70069.1| hypothetical protein CISIN_1g003284mg [Citrus sin...   449   e-123
gb|KDO70068.1| hypothetical protein CISIN_1g003284mg [Citrus sin...   449   e-123
ref|XP_006484420.1| PREDICTED: mediator of RNA polymerase II tra...   449   e-123
ref|XP_006437725.1| hypothetical protein CICLE_v10030710mg [Citr...   449   e-123
ref|XP_007046292.1| Phytochrome and flowering time regulatory pr...   441   e-121
ref|XP_007046291.1| Phytochrome and flowering time regulatory pr...   441   e-121
ref|XP_012478637.1| PREDICTED: mediator of RNA polymerase II tra...   441   e-121
ref|XP_012478635.1| PREDICTED: mediator of RNA polymerase II tra...   441   e-121
ref|XP_012478636.1| PREDICTED: mediator of RNA polymerase II tra...   441   e-121
emb|CBI27055.3| unnamed protein product [Vitis vinifera]              441   e-121
gb|KHG24986.1| Mediator of RNA polymerase II transcription subun...   437   e-120
ref|XP_012463728.1| PREDICTED: mediator of RNA polymerase II tra...   437   e-120
ref|XP_012463727.1| PREDICTED: mediator of RNA polymerase II tra...   437   e-120
gb|KJB80077.1| hypothetical protein B456_013G080300 [Gossypium r...   437   e-120
gb|KJB80075.1| hypothetical protein B456_013G080300 [Gossypium r...   437   e-120

>ref|XP_002278845.1| PREDICTED: mediator of RNA polymerase II transcription subunit 25
            [Vitis vinifera]
          Length = 827

 Score =  466 bits (1199), Expect = e-128
 Identities = 249/346 (71%), Positives = 289/346 (83%), Gaps = 6/346 (1%)
 Frame = -1

Query: 1022 NVQEFKPMVGGLSQPLRPTGPAAANVNILNNLSQVRQAMNSA-----NSMGLQTMGATPM 858
            NVQ+ KP+V G+SQ LRP  PAAANV+ILNNLSQ RQ M+SA      S+GLQ+MG T M
Sbjct: 341  NVQDLKPIVSGISQTLRPVVPAAANVSILNNLSQARQVMHSAALSGGTSIGLQSMGGTSM 400

Query: 857  AMHMSNMISSGMASTALSPAQNVFSPGQSGSNTALSGSGSLVGNTQIAQNTTLGGFSSAT 678
            AMHMSNMISSGMAS+ +   Q VFS GQS  ++ ++GSG+L G  Q+AQN+ LG F+SAT
Sbjct: 401  AMHMSNMISSGMASS-VPATQTVFSSGQSAVSS-ITGSGTLAGTAQVAQNSALGSFTSAT 458

Query: 677  SNMSVNPNHGMSQPMANLQGPVSLGQSAAGINQGSLTGGQIGQAGIGMNQNIMSNGLGQP 498
            SNMSVN N G+SQP++NLQG VS+GQ+  G++QG+L GGQ+ Q+GIGMNQN+MS GLG  
Sbjct: 459  SNMSVNSNLGISQPLSNLQGGVSMGQTVPGMSQGNLPGGQMVQSGIGMNQNMMS-GLGPS 517

Query: 497  GVSAGSGTMIPTPGVPQQVQAGIQPLSVANTSTANMPA-QQTSGAMQSAPGPDKYVKVWE 321
            G+S+G+GTMIPTPG+ QQVQ G+  L V N + ANMP  QQTSGAMQ+A    KYVKVWE
Sbjct: 518  GISSGTGTMIPTPGMSQQVQPGMPSLGVNNNAAANMPLPQQTSGAMQTAQS--KYVKVWE 575

Query: 320  GALSGQRQGQPVFITKLEGYRSASASETLAADWPMMMQIVRLISQDHMHNKQYVGKADFL 141
            G LSGQRQGQPVFIT+LEGYRSASASE+LAA+WP  MQIVRLISQDHM+NKQYVGKADFL
Sbjct: 576  GNLSGQRQGQPVFITRLEGYRSASASESLAANWPATMQIVRLISQDHMNNKQYVGKADFL 635

Query: 140  VFRALNQHGFLGQLQEKKLCAVIQLPSQTLLLSVSDKASRLIGMLF 3
            VFRA+NQHGFLGQLQEKKLCAVIQLPSQTLLLSVSDKA RLIGMLF
Sbjct: 636  VFRAMNQHGFLGQLQEKKLCAVIQLPSQTLLLSVSDKACRLIGMLF 681


>ref|XP_010265228.1| PREDICTED: mediator of RNA polymerase II transcription subunit 25
            [Nelumbo nucifera]
          Length = 809

 Score =  461 bits (1187), Expect = e-127
 Identities = 246/340 (72%), Positives = 283/340 (83%)
 Frame = -1

Query: 1022 NVQEFKPMVGGLSQPLRPTGPAAANVNILNNLSQVRQAMNSANSMGLQTMGATPMAMHMS 843
            NVQEFKP+V  +SQPLRP G AAANVNILNNLSQVR      +S+GLQT+GATPMAMHMS
Sbjct: 341  NVQEFKPIVNPVSQPLRPPG-AAANVNILNNLSQVR-----GSSIGLQTVGATPMAMHMS 394

Query: 842  NMISSGMASTALSPAQNVFSPGQSGSNTALSGSGSLVGNTQIAQNTTLGGFSSATSNMSV 663
            NMISSGMAS+ L  AQ VFS GQS S T+L+GSGSL+G  Q+ QNT +G  +SA SN+S 
Sbjct: 395  NMISSGMASSVLPAAQTVFSSGQS-SITSLTGSGSLMGTAQVTQNTAIGSLTSAASNISG 453

Query: 662  NPNHGMSQPMANLQGPVSLGQSAAGINQGSLTGGQIGQAGIGMNQNIMSNGLGQPGVSAG 483
            N N G+SQP+AN+QG VS+GQ    + QG+L+G QIGQ+GIGMNQNIM+ GLG  G+S+G
Sbjct: 454  NSNLGISQPLANIQGAVSMGQPVPTVGQGNLSGTQIGQSGIGMNQNIMT-GLGPSGISSG 512

Query: 482  SGTMIPTPGVPQQVQAGIQPLSVANTSTANMPAQQTSGAMQSAPGPDKYVKVWEGALSGQ 303
            +GTMIPTPG+ QQVQ G Q L V N S AN+  QQT+G +Q  P   +YVK+WEGALSGQ
Sbjct: 513  AGTMIPTPGMSQQVQGGTQSLGVNNGSAANV--QQTAGTLQ--PSQSRYVKLWEGALSGQ 568

Query: 302  RQGQPVFITKLEGYRSASASETLAADWPMMMQIVRLISQDHMHNKQYVGKADFLVFRALN 123
            RQGQPVFIT+LEGYR+ +ASETLA+DWP  MQIVRLISQDHM+NKQYVGKADFLVFRALN
Sbjct: 569  RQGQPVFITRLEGYRNVTASETLASDWPPTMQIVRLISQDHMNNKQYVGKADFLVFRALN 628

Query: 122  QHGFLGQLQEKKLCAVIQLPSQTLLLSVSDKASRLIGMLF 3
            QHGFLGQLQ+KKLCAVIQLPSQTLLLSVSDKA RLIGMLF
Sbjct: 629  QHGFLGQLQDKKLCAVIQLPSQTLLLSVSDKACRLIGMLF 668


>ref|XP_012082045.1| PREDICTED: mediator of RNA polymerase II transcription subunit 25
            isoform X2 [Jatropha curcas]
          Length = 720

 Score =  453 bits (1165), Expect = e-124
 Identities = 243/346 (70%), Positives = 285/346 (82%), Gaps = 6/346 (1%)
 Frame = -1

Query: 1022 NVQEFKPMVGGLSQPLRPTGPAAANVNILNNLSQVRQAMNSA-----NSMGLQTMGATPM 858
            NV E KP V G+ Q +RP  P AANV+ILNNLSQ RQ MNSA     +S+ L +M  TP+
Sbjct: 341  NVPELKPTVSGMPQSVRPVPPGAANVSILNNLSQARQVMNSAALTGGSSIALPSMNQTPV 400

Query: 857  AMHMSNMISSGMASTALSPAQNVFSPGQSGSNTALSGSGSLVGNTQIAQNTTLGGFSSAT 678
            AMHMSNMISSGMA T++  AQ VFS GQ G  T+++GSG+L G +QIA N+ LG F+S+T
Sbjct: 401  AMHMSNMISSGMA-TSVPAAQTVFSSGQPGI-TSMTGSGTLTGTSQIAPNSGLGSFASST 458

Query: 677  SNMSVNPNHGMSQPMANLQGPVSLGQSAAGINQGSLTGGQIGQAGIGMNQNIMSNGLGQP 498
            SN+S N N G+SQPMANLQG VS+GQS +G++QG+L+GGQ+ Q+ IGMNQN+M NGLG  
Sbjct: 459  SNISGNSNLGISQPMANLQGGVSMGQSVSGMSQGNLSGGQMVQSVIGMNQNVM-NGLGPS 517

Query: 497  GVSAGSGTMIPTPGVPQQVQAGIQPLSVANTSTANMP-AQQTSGAMQSAPGPDKYVKVWE 321
            GVS+G+ TMIPTPG+PQQ Q G+Q L V N S ANMP +QQT+ A+QSA    KYVKVWE
Sbjct: 518  GVSSGTSTMIPTPGMPQQAQTGMQSLGVNNNSAANMPLSQQTTSALQSAQS--KYVKVWE 575

Query: 320  GALSGQRQGQPVFITKLEGYRSASASETLAADWPMMMQIVRLISQDHMHNKQYVGKADFL 141
            G LSGQRQGQPVFIT+LEGYR+ASASE+LAA+WP  MQIVRLISQDHM+NKQYVGKADFL
Sbjct: 576  GNLSGQRQGQPVFITRLEGYRNASASESLAANWPPTMQIVRLISQDHMNNKQYVGKADFL 635

Query: 140  VFRALNQHGFLGQLQEKKLCAVIQLPSQTLLLSVSDKASRLIGMLF 3
            VFRA++QHGFLGQLQEKKLCAVIQLPSQTLLLSVSDKA RLIGMLF
Sbjct: 636  VFRAMDQHGFLGQLQEKKLCAVIQLPSQTLLLSVSDKACRLIGMLF 681


>ref|XP_012082044.1| PREDICTED: mediator of RNA polymerase II transcription subunit 25
            isoform X1 [Jatropha curcas]
          Length = 842

 Score =  453 bits (1165), Expect = e-124
 Identities = 243/346 (70%), Positives = 285/346 (82%), Gaps = 6/346 (1%)
 Frame = -1

Query: 1022 NVQEFKPMVGGLSQPLRPTGPAAANVNILNNLSQVRQAMNSA-----NSMGLQTMGATPM 858
            NV E KP V G+ Q +RP  P AANV+ILNNLSQ RQ MNSA     +S+ L +M  TP+
Sbjct: 341  NVPELKPTVSGMPQSVRPVPPGAANVSILNNLSQARQVMNSAALTGGSSIALPSMNQTPV 400

Query: 857  AMHMSNMISSGMASTALSPAQNVFSPGQSGSNTALSGSGSLVGNTQIAQNTTLGGFSSAT 678
            AMHMSNMISSGMA T++  AQ VFS GQ G  T+++GSG+L G +QIA N+ LG F+S+T
Sbjct: 401  AMHMSNMISSGMA-TSVPAAQTVFSSGQPGI-TSMTGSGTLTGTSQIAPNSGLGSFASST 458

Query: 677  SNMSVNPNHGMSQPMANLQGPVSLGQSAAGINQGSLTGGQIGQAGIGMNQNIMSNGLGQP 498
            SN+S N N G+SQPMANLQG VS+GQS +G++QG+L+GGQ+ Q+ IGMNQN+M NGLG  
Sbjct: 459  SNISGNSNLGISQPMANLQGGVSMGQSVSGMSQGNLSGGQMVQSVIGMNQNVM-NGLGPS 517

Query: 497  GVSAGSGTMIPTPGVPQQVQAGIQPLSVANTSTANMP-AQQTSGAMQSAPGPDKYVKVWE 321
            GVS+G+ TMIPTPG+PQQ Q G+Q L V N S ANMP +QQT+ A+QSA    KYVKVWE
Sbjct: 518  GVSSGTSTMIPTPGMPQQAQTGMQSLGVNNNSAANMPLSQQTTSALQSAQS--KYVKVWE 575

Query: 320  GALSGQRQGQPVFITKLEGYRSASASETLAADWPMMMQIVRLISQDHMHNKQYVGKADFL 141
            G LSGQRQGQPVFIT+LEGYR+ASASE+LAA+WP  MQIVRLISQDHM+NKQYVGKADFL
Sbjct: 576  GNLSGQRQGQPVFITRLEGYRNASASESLAANWPPTMQIVRLISQDHMNNKQYVGKADFL 635

Query: 140  VFRALNQHGFLGQLQEKKLCAVIQLPSQTLLLSVSDKASRLIGMLF 3
            VFRA++QHGFLGQLQEKKLCAVIQLPSQTLLLSVSDKA RLIGMLF
Sbjct: 636  VFRAMDQHGFLGQLQEKKLCAVIQLPSQTLLLSVSDKACRLIGMLF 681


>gb|KDO70070.1| hypothetical protein CISIN_1g003284mg [Citrus sinensis]
          Length = 818

 Score =  449 bits (1156), Expect = e-123
 Identities = 244/346 (70%), Positives = 282/346 (81%), Gaps = 6/346 (1%)
 Frame = -1

Query: 1022 NVQEFKPMVGGLSQPLRPTGPAAANVNILNNLSQVRQAMNSA-----NSMGLQTMGATPM 858
            +V E KP+V G+SQPLRP  PAAANVNILNNLSQ RQ MN+A      S+GLQ+MG TPM
Sbjct: 324  SVPEVKPLVSGMSQPLRPMAPAAANVNILNNLSQARQVMNNAALTGGTSIGLQSMGQTPM 383

Query: 857  AMHMSNMISSGMASTALSPAQNVFSPGQSGSNTALSGSGSLVGNTQIAQNTTLGGFSSAT 678
            AMHMSNMISSGMAS+ +  +Q VFS  QSG  T++ GSG+L G +Q+ QN+ L  F+SA 
Sbjct: 384  AMHMSNMISSGMASS-VPTSQPVFSSAQSGI-TSIGGSGTLTGTSQVPQNSGLNSFTSAP 441

Query: 677  SNMSVNPNHGMSQPMANLQGPVSLGQSAAGINQGSLTGGQIGQAGIGMNQNIMSNGLGQP 498
            SN+S N N  +SQPM  LQG  S+GQS  G++QG+ +GGQ+ Q GI MNQN+MS GLG  
Sbjct: 442  SNLSGNSNPSISQPMGTLQGGASMGQSV-GMSQGNHSGGQMVQNGISMNQNMMS-GLGPS 499

Query: 497  GVSAGSGTMIPTPGVPQQVQAGIQPLSVANTSTANMP-AQQTSGAMQSAPGPDKYVKVWE 321
            GVS+G+GTMIPTPG+ QQ Q+G+QPLSV N +  NM  +QQTS A+ S+    KYVKVWE
Sbjct: 500  GVSSGTGTMIPTPGMSQQAQSGMQPLSVNNNTAVNMQLSQQTSSALHSSQS--KYVKVWE 557

Query: 320  GALSGQRQGQPVFITKLEGYRSASASETLAADWPMMMQIVRLISQDHMHNKQYVGKADFL 141
            G+LSGQRQGQPVFITKLEGYRSASASETLAA+WP  MQIVRLISQDHM+NKQYVGKADFL
Sbjct: 558  GSLSGQRQGQPVFITKLEGYRSASASETLAANWPPTMQIVRLISQDHMNNKQYVGKADFL 617

Query: 140  VFRALNQHGFLGQLQEKKLCAVIQLPSQTLLLSVSDKASRLIGMLF 3
            VFRA+NQHGFLGQLQEKKLCAVIQLPSQTLLLSVSDKA RLIGMLF
Sbjct: 618  VFRAMNQHGFLGQLQEKKLCAVIQLPSQTLLLSVSDKACRLIGMLF 663


>gb|KDO70069.1| hypothetical protein CISIN_1g003284mg [Citrus sinensis]
          Length = 834

 Score =  449 bits (1156), Expect = e-123
 Identities = 244/346 (70%), Positives = 282/346 (81%), Gaps = 6/346 (1%)
 Frame = -1

Query: 1022 NVQEFKPMVGGLSQPLRPTGPAAANVNILNNLSQVRQAMNSA-----NSMGLQTMGATPM 858
            +V E KP+V G+SQPLRP  PAAANVNILNNLSQ RQ MN+A      S+GLQ+MG TPM
Sbjct: 340  SVPEVKPLVSGMSQPLRPMAPAAANVNILNNLSQARQVMNNAALTGGTSIGLQSMGQTPM 399

Query: 857  AMHMSNMISSGMASTALSPAQNVFSPGQSGSNTALSGSGSLVGNTQIAQNTTLGGFSSAT 678
            AMHMSNMISSGMAS+ +  +Q VFS  QSG  T++ GSG+L G +Q+ QN+ L  F+SA 
Sbjct: 400  AMHMSNMISSGMASS-VPTSQPVFSSAQSGI-TSIGGSGTLTGTSQVPQNSGLNSFTSAP 457

Query: 677  SNMSVNPNHGMSQPMANLQGPVSLGQSAAGINQGSLTGGQIGQAGIGMNQNIMSNGLGQP 498
            SN+S N N  +SQPM  LQG  S+GQS  G++QG+ +GGQ+ Q GI MNQN+MS GLG  
Sbjct: 458  SNLSGNSNPSISQPMGTLQGGASMGQSV-GMSQGNHSGGQMVQNGISMNQNMMS-GLGPS 515

Query: 497  GVSAGSGTMIPTPGVPQQVQAGIQPLSVANTSTANMP-AQQTSGAMQSAPGPDKYVKVWE 321
            GVS+G+GTMIPTPG+ QQ Q+G+QPLSV N +  NM  +QQTS A+ S+    KYVKVWE
Sbjct: 516  GVSSGTGTMIPTPGMSQQAQSGMQPLSVNNNTAVNMQLSQQTSSALHSSQS--KYVKVWE 573

Query: 320  GALSGQRQGQPVFITKLEGYRSASASETLAADWPMMMQIVRLISQDHMHNKQYVGKADFL 141
            G+LSGQRQGQPVFITKLEGYRSASASETLAA+WP  MQIVRLISQDHM+NKQYVGKADFL
Sbjct: 574  GSLSGQRQGQPVFITKLEGYRSASASETLAANWPPTMQIVRLISQDHMNNKQYVGKADFL 633

Query: 140  VFRALNQHGFLGQLQEKKLCAVIQLPSQTLLLSVSDKASRLIGMLF 3
            VFRA+NQHGFLGQLQEKKLCAVIQLPSQTLLLSVSDKA RLIGMLF
Sbjct: 634  VFRAMNQHGFLGQLQEKKLCAVIQLPSQTLLLSVSDKACRLIGMLF 679


>gb|KDO70068.1| hypothetical protein CISIN_1g003284mg [Citrus sinensis]
          Length = 833

 Score =  449 bits (1156), Expect = e-123
 Identities = 244/346 (70%), Positives = 282/346 (81%), Gaps = 6/346 (1%)
 Frame = -1

Query: 1022 NVQEFKPMVGGLSQPLRPTGPAAANVNILNNLSQVRQAMNSA-----NSMGLQTMGATPM 858
            +V E KP+V G+SQPLRP  PAAANVNILNNLSQ RQ MN+A      S+GLQ+MG TPM
Sbjct: 339  SVPEVKPLVSGMSQPLRPMAPAAANVNILNNLSQARQVMNNAALTGGTSIGLQSMGQTPM 398

Query: 857  AMHMSNMISSGMASTALSPAQNVFSPGQSGSNTALSGSGSLVGNTQIAQNTTLGGFSSAT 678
            AMHMSNMISSGMAS+ +  +Q VFS  QSG  T++ GSG+L G +Q+ QN+ L  F+SA 
Sbjct: 399  AMHMSNMISSGMASS-VPTSQPVFSSAQSGI-TSIGGSGTLTGTSQVPQNSGLNSFTSAP 456

Query: 677  SNMSVNPNHGMSQPMANLQGPVSLGQSAAGINQGSLTGGQIGQAGIGMNQNIMSNGLGQP 498
            SN+S N N  +SQPM  LQG  S+GQS  G++QG+ +GGQ+ Q GI MNQN+MS GLG  
Sbjct: 457  SNLSGNSNPSISQPMGTLQGGASMGQSV-GMSQGNHSGGQMVQNGISMNQNMMS-GLGPS 514

Query: 497  GVSAGSGTMIPTPGVPQQVQAGIQPLSVANTSTANMP-AQQTSGAMQSAPGPDKYVKVWE 321
            GVS+G+GTMIPTPG+ QQ Q+G+QPLSV N +  NM  +QQTS A+ S+    KYVKVWE
Sbjct: 515  GVSSGTGTMIPTPGMSQQAQSGMQPLSVNNNTAVNMQLSQQTSSALHSSQS--KYVKVWE 572

Query: 320  GALSGQRQGQPVFITKLEGYRSASASETLAADWPMMMQIVRLISQDHMHNKQYVGKADFL 141
            G+LSGQRQGQPVFITKLEGYRSASASETLAA+WP  MQIVRLISQDHM+NKQYVGKADFL
Sbjct: 573  GSLSGQRQGQPVFITKLEGYRSASASETLAANWPPTMQIVRLISQDHMNNKQYVGKADFL 632

Query: 140  VFRALNQHGFLGQLQEKKLCAVIQLPSQTLLLSVSDKASRLIGMLF 3
            VFRA+NQHGFLGQLQEKKLCAVIQLPSQTLLLSVSDKA RLIGMLF
Sbjct: 633  VFRAMNQHGFLGQLQEKKLCAVIQLPSQTLLLSVSDKACRLIGMLF 678


>ref|XP_006484420.1| PREDICTED: mediator of RNA polymerase II transcription subunit
            25-like isoform X2 [Citrus sinensis]
          Length = 829

 Score =  449 bits (1156), Expect = e-123
 Identities = 244/346 (70%), Positives = 282/346 (81%), Gaps = 6/346 (1%)
 Frame = -1

Query: 1022 NVQEFKPMVGGLSQPLRPTGPAAANVNILNNLSQVRQAMNSA-----NSMGLQTMGATPM 858
            +V E KP+V G+SQPLRP  PAAANVNILNNLSQ RQ MN+A      S+GLQ+MG TPM
Sbjct: 339  SVPEVKPLVSGMSQPLRPMAPAAANVNILNNLSQARQVMNNAALTGGTSIGLQSMGQTPM 398

Query: 857  AMHMSNMISSGMASTALSPAQNVFSPGQSGSNTALSGSGSLVGNTQIAQNTTLGGFSSAT 678
            AMHMSNMISSGMAS+ +  +Q VFS  QSG  T++ GSG+L G +Q+ QN+ L  F+SA 
Sbjct: 399  AMHMSNMISSGMASS-VPTSQPVFSSAQSGI-TSIGGSGTLTGTSQVPQNSGLNSFTSAP 456

Query: 677  SNMSVNPNHGMSQPMANLQGPVSLGQSAAGINQGSLTGGQIGQAGIGMNQNIMSNGLGQP 498
            SN+S N N  +SQPM  LQG  S+GQS  G++QG+ +GGQ+ Q GI MNQN+MS GLG  
Sbjct: 457  SNLSGNSNPSISQPMGTLQGGASMGQSV-GMSQGNHSGGQMVQNGISMNQNMMS-GLGPS 514

Query: 497  GVSAGSGTMIPTPGVPQQVQAGIQPLSVANTSTANMP-AQQTSGAMQSAPGPDKYVKVWE 321
            GVS+G+GTMIPTPG+ QQ Q+G+QPLSV N +  NM  +QQTS A+ S+    KYVKVWE
Sbjct: 515  GVSSGTGTMIPTPGMSQQAQSGMQPLSVNNNTAVNMQLSQQTSSALHSSQS--KYVKVWE 572

Query: 320  GALSGQRQGQPVFITKLEGYRSASASETLAADWPMMMQIVRLISQDHMHNKQYVGKADFL 141
            G+LSGQRQGQPVFITKLEGYRSASASETLAA+WP  MQIVRLISQDHM+NKQYVGKADFL
Sbjct: 573  GSLSGQRQGQPVFITKLEGYRSASASETLAANWPPTMQIVRLISQDHMNNKQYVGKADFL 632

Query: 140  VFRALNQHGFLGQLQEKKLCAVIQLPSQTLLLSVSDKASRLIGMLF 3
            VFRA+NQHGFLGQLQEKKLCAVIQLPSQTLLLSVSDKA RLIGMLF
Sbjct: 633  VFRAMNQHGFLGQLQEKKLCAVIQLPSQTLLLSVSDKACRLIGMLF 678


>ref|XP_006437725.1| hypothetical protein CICLE_v10030710mg [Citrus clementina]
            gi|568861864|ref|XP_006484419.1| PREDICTED: mediator of
            RNA polymerase II transcription subunit 25-like isoform
            X1 [Citrus sinensis] gi|557539921|gb|ESR50965.1|
            hypothetical protein CICLE_v10030710mg [Citrus
            clementina]
          Length = 830

 Score =  449 bits (1156), Expect = e-123
 Identities = 244/346 (70%), Positives = 282/346 (81%), Gaps = 6/346 (1%)
 Frame = -1

Query: 1022 NVQEFKPMVGGLSQPLRPTGPAAANVNILNNLSQVRQAMNSA-----NSMGLQTMGATPM 858
            +V E KP+V G+SQPLRP  PAAANVNILNNLSQ RQ MN+A      S+GLQ+MG TPM
Sbjct: 340  SVPEVKPLVSGMSQPLRPMAPAAANVNILNNLSQARQVMNNAALTGGTSIGLQSMGQTPM 399

Query: 857  AMHMSNMISSGMASTALSPAQNVFSPGQSGSNTALSGSGSLVGNTQIAQNTTLGGFSSAT 678
            AMHMSNMISSGMAS+ +  +Q VFS  QSG  T++ GSG+L G +Q+ QN+ L  F+SA 
Sbjct: 400  AMHMSNMISSGMASS-VPTSQPVFSSAQSGI-TSIGGSGTLTGTSQVPQNSGLNSFTSAP 457

Query: 677  SNMSVNPNHGMSQPMANLQGPVSLGQSAAGINQGSLTGGQIGQAGIGMNQNIMSNGLGQP 498
            SN+S N N  +SQPM  LQG  S+GQS  G++QG+ +GGQ+ Q GI MNQN+MS GLG  
Sbjct: 458  SNLSGNSNPSISQPMGTLQGGASMGQSV-GMSQGNHSGGQMVQNGISMNQNMMS-GLGPS 515

Query: 497  GVSAGSGTMIPTPGVPQQVQAGIQPLSVANTSTANMP-AQQTSGAMQSAPGPDKYVKVWE 321
            GVS+G+GTMIPTPG+ QQ Q+G+QPLSV N +  NM  +QQTS A+ S+    KYVKVWE
Sbjct: 516  GVSSGTGTMIPTPGMSQQAQSGMQPLSVNNNTAVNMQLSQQTSSALHSSQS--KYVKVWE 573

Query: 320  GALSGQRQGQPVFITKLEGYRSASASETLAADWPMMMQIVRLISQDHMHNKQYVGKADFL 141
            G+LSGQRQGQPVFITKLEGYRSASASETLAA+WP  MQIVRLISQDHM+NKQYVGKADFL
Sbjct: 574  GSLSGQRQGQPVFITKLEGYRSASASETLAANWPPTMQIVRLISQDHMNNKQYVGKADFL 633

Query: 140  VFRALNQHGFLGQLQEKKLCAVIQLPSQTLLLSVSDKASRLIGMLF 3
            VFRA+NQHGFLGQLQEKKLCAVIQLPSQTLLLSVSDKA RLIGMLF
Sbjct: 634  VFRAMNQHGFLGQLQEKKLCAVIQLPSQTLLLSVSDKACRLIGMLF 679


>ref|XP_007046292.1| Phytochrome and flowering time regulatory protein isoform 2
            [Theobroma cacao] gi|508710227|gb|EOY02124.1| Phytochrome
            and flowering time regulatory protein isoform 2
            [Theobroma cacao]
          Length = 860

 Score =  441 bits (1134), Expect = e-121
 Identities = 241/346 (69%), Positives = 281/346 (81%), Gaps = 6/346 (1%)
 Frame = -1

Query: 1022 NVQEFKPMVGGLSQPLRPTGPAAANVNILNNLSQVRQAMNSA-----NSMGLQTMGATPM 858
            NVQE KP V G++QPLRP  P AANVNILNNLSQ R  MNSA      S+GL +MG TP+
Sbjct: 331  NVQELKPSVSGMTQPLRPV-PPAANVNILNNLSQAR-VMNSAALTGGTSIGLPSMGQTPV 388

Query: 857  AMHMSNMISSGMASTALSPAQNVFSPGQSGSNTALSGSGSLVGNTQIAQNTTLGGFSSAT 678
            AMHMSNMISSGMAS+ + PAQ VFS GQS   T+L+GSG+L G  Q+  N+ L  F+SAT
Sbjct: 389  AMHMSNMISSGMASS-VPPAQTVFSSGQS-CMTSLTGSGALTGTVQVPPNSGLSSFASAT 446

Query: 677  SNMSVNPNHGMSQPMANLQGPVSLGQSAAGINQGSLTGGQIGQAGIGMNQNIMSNGLGQP 498
            SN++ N N GMSQPM N+Q  VS+GQS  G++QG+ +G Q+ Q+G+GM+QN+  +GLG  
Sbjct: 447  SNVTANSNIGMSQPMGNVQSGVSMGQSVPGMSQGNHSGAQMVQSGVGMSQNM--SGLGPS 504

Query: 497  GVSAGSGTMIPTPGVPQQVQAGIQPLSVANTSTANMP-AQQTSGAMQSAPGPDKYVKVWE 321
             VS+G+GTM P PG+ QQVQ+G+Q L V+N+S A+MP +QQTS A+QSA    KYVKVWE
Sbjct: 505  TVSSGTGTMFPIPGMSQQVQSGMQTLGVSNSSAASMPLSQQTSSALQSAQS--KYVKVWE 562

Query: 320  GALSGQRQGQPVFITKLEGYRSASASETLAADWPMMMQIVRLISQDHMHNKQYVGKADFL 141
            G LSGQRQGQPVFIT+LEGYRSASASETLAA WP  MQIVRLISQDHM+NKQYVGKADFL
Sbjct: 563  GNLSGQRQGQPVFITRLEGYRSASASETLAAHWPQTMQIVRLISQDHMNNKQYVGKADFL 622

Query: 140  VFRALNQHGFLGQLQEKKLCAVIQLPSQTLLLSVSDKASRLIGMLF 3
            VFRA+NQHGFLGQLQEKKLCAVIQLPSQTLLLSVSDKA RLIGMLF
Sbjct: 623  VFRAMNQHGFLGQLQEKKLCAVIQLPSQTLLLSVSDKACRLIGMLF 668


>ref|XP_007046291.1| Phytochrome and flowering time regulatory protein isoform 1
            [Theobroma cacao] gi|508710226|gb|EOY02123.1| Phytochrome
            and flowering time regulatory protein isoform 1
            [Theobroma cacao]
          Length = 871

 Score =  441 bits (1134), Expect = e-121
 Identities = 241/346 (69%), Positives = 281/346 (81%), Gaps = 6/346 (1%)
 Frame = -1

Query: 1022 NVQEFKPMVGGLSQPLRPTGPAAANVNILNNLSQVRQAMNSA-----NSMGLQTMGATPM 858
            NVQE KP V G++QPLRP  P AANVNILNNLSQ R  MNSA      S+GL +MG TP+
Sbjct: 342  NVQELKPSVSGMTQPLRPV-PPAANVNILNNLSQAR-VMNSAALTGGTSIGLPSMGQTPV 399

Query: 857  AMHMSNMISSGMASTALSPAQNVFSPGQSGSNTALSGSGSLVGNTQIAQNTTLGGFSSAT 678
            AMHMSNMISSGMAS+ + PAQ VFS GQS   T+L+GSG+L G  Q+  N+ L  F+SAT
Sbjct: 400  AMHMSNMISSGMASS-VPPAQTVFSSGQS-CMTSLTGSGALTGTVQVPPNSGLSSFASAT 457

Query: 677  SNMSVNPNHGMSQPMANLQGPVSLGQSAAGINQGSLTGGQIGQAGIGMNQNIMSNGLGQP 498
            SN++ N N GMSQPM N+Q  VS+GQS  G++QG+ +G Q+ Q+G+GM+QN+  +GLG  
Sbjct: 458  SNVTANSNIGMSQPMGNVQSGVSMGQSVPGMSQGNHSGAQMVQSGVGMSQNM--SGLGPS 515

Query: 497  GVSAGSGTMIPTPGVPQQVQAGIQPLSVANTSTANMP-AQQTSGAMQSAPGPDKYVKVWE 321
             VS+G+GTM P PG+ QQVQ+G+Q L V+N+S A+MP +QQTS A+QSA    KYVKVWE
Sbjct: 516  TVSSGTGTMFPIPGMSQQVQSGMQTLGVSNSSAASMPLSQQTSSALQSAQS--KYVKVWE 573

Query: 320  GALSGQRQGQPVFITKLEGYRSASASETLAADWPMMMQIVRLISQDHMHNKQYVGKADFL 141
            G LSGQRQGQPVFIT+LEGYRSASASETLAA WP  MQIVRLISQDHM+NKQYVGKADFL
Sbjct: 574  GNLSGQRQGQPVFITRLEGYRSASASETLAAHWPQTMQIVRLISQDHMNNKQYVGKADFL 633

Query: 140  VFRALNQHGFLGQLQEKKLCAVIQLPSQTLLLSVSDKASRLIGMLF 3
            VFRA+NQHGFLGQLQEKKLCAVIQLPSQTLLLSVSDKA RLIGMLF
Sbjct: 634  VFRAMNQHGFLGQLQEKKLCAVIQLPSQTLLLSVSDKACRLIGMLF 679


>ref|XP_012478637.1| PREDICTED: mediator of RNA polymerase II transcription subunit 25
            isoform X3 [Gossypium raimondii]
          Length = 726

 Score =  441 bits (1133), Expect = e-121
 Identities = 240/347 (69%), Positives = 282/347 (81%), Gaps = 7/347 (2%)
 Frame = -1

Query: 1022 NVQEFKPMVGGLSQPLRPTGPAAANVNILNNLSQVRQAMNSA-----NSMGLQTMGATPM 858
            NVQE KP VGG++QPLRP  PAAANVNILNNLSQ R  MNSA      S+GLQ+MG TP+
Sbjct: 234  NVQEIKPSVGGMTQPLRPVPPAAANVNILNNLSQAR-VMNSAALSGGTSIGLQSMGQTPV 292

Query: 857  AMHMSNMISSGMASTALSPAQNVFSPGQSGSNTALSGSGSLVGNTQIAQNTTLGGFSSAT 678
            AMHMSNMISSGM S+ +  AQ VFS GQSG  T+L GSG++ G TQ+  N+ L  F+SAT
Sbjct: 293  AMHMSNMISSGMTSS-VPLAQTVFSSGQSGM-TSLPGSGAVTGTTQVPPNSNLNSFASAT 350

Query: 677  SNMSVNPNHGMSQPMANLQGPVSLGQSAAG-INQGSLTGGQIGQAGIGMNQNIMSNGLGQ 501
            SN++ N N G+SQPM N+QG VS+GQS  G ++QG+ +G Q+ Q G+ M+Q++  +GLG 
Sbjct: 351  SNVAGNSNIGISQPMCNVQGAVSMGQSVPGSMSQGNHSGAQLVQTGVAMSQSM--SGLGP 408

Query: 500  PGVSAGSGTMIPTPGVPQQVQAGIQPLSVANTSTANMP-AQQTSGAMQSAPGPDKYVKVW 324
              VS+G+GT+IP PG+ QQVQ+G+Q L V N S A+MP +QQTS A+QSA    KYVKVW
Sbjct: 409  STVSSGTGTLIPAPGMSQQVQSGMQTLGVNNNSAASMPLSQQTSSALQSAQS--KYVKVW 466

Query: 323  EGALSGQRQGQPVFITKLEGYRSASASETLAADWPMMMQIVRLISQDHMHNKQYVGKADF 144
            EG LSGQRQGQPVFIT+LEGYRSASASETLA+DWP  MQIVRLISQDHM+NKQYVGKADF
Sbjct: 467  EGNLSGQRQGQPVFITRLEGYRSASASETLASDWPQTMQIVRLISQDHMNNKQYVGKADF 526

Query: 143  LVFRALNQHGFLGQLQEKKLCAVIQLPSQTLLLSVSDKASRLIGMLF 3
            LVFRA+NQHGFLGQLQEKKLCAVIQLPSQTL+LSVSDKA RLIGMLF
Sbjct: 527  LVFRAMNQHGFLGQLQEKKLCAVIQLPSQTLMLSVSDKAYRLIGMLF 573


>ref|XP_012478635.1| PREDICTED: mediator of RNA polymerase II transcription subunit 25
            isoform X1 [Gossypium raimondii]
          Length = 840

 Score =  441 bits (1133), Expect = e-121
 Identities = 240/347 (69%), Positives = 282/347 (81%), Gaps = 7/347 (2%)
 Frame = -1

Query: 1022 NVQEFKPMVGGLSQPLRPTGPAAANVNILNNLSQVRQAMNSA-----NSMGLQTMGATPM 858
            NVQE KP VGG++QPLRP  PAAANVNILNNLSQ R  MNSA      S+GLQ+MG TP+
Sbjct: 348  NVQEIKPSVGGMTQPLRPVPPAAANVNILNNLSQAR-VMNSAALSGGTSIGLQSMGQTPV 406

Query: 857  AMHMSNMISSGMASTALSPAQNVFSPGQSGSNTALSGSGSLVGNTQIAQNTTLGGFSSAT 678
            AMHMSNMISSGM S+ +  AQ VFS GQSG  T+L GSG++ G TQ+  N+ L  F+SAT
Sbjct: 407  AMHMSNMISSGMTSS-VPLAQTVFSSGQSGM-TSLPGSGAVTGTTQVPPNSNLNSFASAT 464

Query: 677  SNMSVNPNHGMSQPMANLQGPVSLGQSAAG-INQGSLTGGQIGQAGIGMNQNIMSNGLGQ 501
            SN++ N N G+SQPM N+QG VS+GQS  G ++QG+ +G Q+ Q G+ M+Q++  +GLG 
Sbjct: 465  SNVAGNSNIGISQPMCNVQGAVSMGQSVPGSMSQGNHSGAQLVQTGVAMSQSM--SGLGP 522

Query: 500  PGVSAGSGTMIPTPGVPQQVQAGIQPLSVANTSTANMP-AQQTSGAMQSAPGPDKYVKVW 324
              VS+G+GT+IP PG+ QQVQ+G+Q L V N S A+MP +QQTS A+QSA    KYVKVW
Sbjct: 523  STVSSGTGTLIPAPGMSQQVQSGMQTLGVNNNSAASMPLSQQTSSALQSAQS--KYVKVW 580

Query: 323  EGALSGQRQGQPVFITKLEGYRSASASETLAADWPMMMQIVRLISQDHMHNKQYVGKADF 144
            EG LSGQRQGQPVFIT+LEGYRSASASETLA+DWP  MQIVRLISQDHM+NKQYVGKADF
Sbjct: 581  EGNLSGQRQGQPVFITRLEGYRSASASETLASDWPQTMQIVRLISQDHMNNKQYVGKADF 640

Query: 143  LVFRALNQHGFLGQLQEKKLCAVIQLPSQTLLLSVSDKASRLIGMLF 3
            LVFRA+NQHGFLGQLQEKKLCAVIQLPSQTL+LSVSDKA RLIGMLF
Sbjct: 641  LVFRAMNQHGFLGQLQEKKLCAVIQLPSQTLMLSVSDKAYRLIGMLF 687


>ref|XP_012478636.1| PREDICTED: mediator of RNA polymerase II transcription subunit 25
            isoform X2 [Gossypium raimondii]
            gi|763763083|gb|KJB30337.1| hypothetical protein
            B456_005G138200 [Gossypium raimondii]
          Length = 834

 Score =  441 bits (1133), Expect = e-121
 Identities = 240/347 (69%), Positives = 282/347 (81%), Gaps = 7/347 (2%)
 Frame = -1

Query: 1022 NVQEFKPMVGGLSQPLRPTGPAAANVNILNNLSQVRQAMNSA-----NSMGLQTMGATPM 858
            NVQE KP VGG++QPLRP  PAAANVNILNNLSQ R  MNSA      S+GLQ+MG TP+
Sbjct: 342  NVQEIKPSVGGMTQPLRPVPPAAANVNILNNLSQAR-VMNSAALSGGTSIGLQSMGQTPV 400

Query: 857  AMHMSNMISSGMASTALSPAQNVFSPGQSGSNTALSGSGSLVGNTQIAQNTTLGGFSSAT 678
            AMHMSNMISSGM S+ +  AQ VFS GQSG  T+L GSG++ G TQ+  N+ L  F+SAT
Sbjct: 401  AMHMSNMISSGMTSS-VPLAQTVFSSGQSGM-TSLPGSGAVTGTTQVPPNSNLNSFASAT 458

Query: 677  SNMSVNPNHGMSQPMANLQGPVSLGQSAAG-INQGSLTGGQIGQAGIGMNQNIMSNGLGQ 501
            SN++ N N G+SQPM N+QG VS+GQS  G ++QG+ +G Q+ Q G+ M+Q++  +GLG 
Sbjct: 459  SNVAGNSNIGISQPMCNVQGAVSMGQSVPGSMSQGNHSGAQLVQTGVAMSQSM--SGLGP 516

Query: 500  PGVSAGSGTMIPTPGVPQQVQAGIQPLSVANTSTANMP-AQQTSGAMQSAPGPDKYVKVW 324
              VS+G+GT+IP PG+ QQVQ+G+Q L V N S A+MP +QQTS A+QSA    KYVKVW
Sbjct: 517  STVSSGTGTLIPAPGMSQQVQSGMQTLGVNNNSAASMPLSQQTSSALQSAQS--KYVKVW 574

Query: 323  EGALSGQRQGQPVFITKLEGYRSASASETLAADWPMMMQIVRLISQDHMHNKQYVGKADF 144
            EG LSGQRQGQPVFIT+LEGYRSASASETLA+DWP  MQIVRLISQDHM+NKQYVGKADF
Sbjct: 575  EGNLSGQRQGQPVFITRLEGYRSASASETLASDWPQTMQIVRLISQDHMNNKQYVGKADF 634

Query: 143  LVFRALNQHGFLGQLQEKKLCAVIQLPSQTLLLSVSDKASRLIGMLF 3
            LVFRA+NQHGFLGQLQEKKLCAVIQLPSQTL+LSVSDKA RLIGMLF
Sbjct: 635  LVFRAMNQHGFLGQLQEKKLCAVIQLPSQTLMLSVSDKAYRLIGMLF 681


>emb|CBI27055.3| unnamed protein product [Vitis vinifera]
          Length = 815

 Score =  441 bits (1133), Expect = e-121
 Identities = 241/346 (69%), Positives = 278/346 (80%), Gaps = 6/346 (1%)
 Frame = -1

Query: 1022 NVQEFKPMVGGLSQPLRPTGPAAANVNILNNLSQVRQAMNSA-----NSMGLQTMGATPM 858
            NVQ+ KP+V G+SQ LRP  PAAANV+ILNNLSQ RQ M+SA      S+GLQ+MG T M
Sbjct: 341  NVQDLKPIVSGISQTLRPVVPAAANVSILNNLSQARQVMHSAALSGGTSIGLQSMGGTSM 400

Query: 857  AMHMSNMISSGMASTALSPAQNVFSPGQSGSNTALSGSGSLVGNTQIAQNTTLGGFSSAT 678
            AMHMSNMISSGMAS+ +   Q VFS GQS  ++ ++GSG+L G  Q+AQN+ LG F+SAT
Sbjct: 401  AMHMSNMISSGMASS-VPATQTVFSSGQSAVSS-ITGSGTLAGTAQVAQNSALGSFTSAT 458

Query: 677  SNMSVNPNHGMSQPMANLQGPVSLGQSAAGINQGSLTGGQIGQAGIGMNQNIMSNGLGQP 498
            SNMSVN N G+SQP+              G++QG+L GGQ+ Q+GIGMNQN+MS GLG  
Sbjct: 459  SNMSVNSNLGISQPLI------------PGMSQGNLPGGQMVQSGIGMNQNMMS-GLGPS 505

Query: 497  GVSAGSGTMIPTPGVPQQVQAGIQPLSVANTSTANMPA-QQTSGAMQSAPGPDKYVKVWE 321
            G+S+G+GTMIPTPG+ QQVQ G+  L V N + ANMP  QQTSGAMQ+A    KYVKVWE
Sbjct: 506  GISSGTGTMIPTPGMSQQVQPGMPSLGVNNNAAANMPLPQQTSGAMQTAQS--KYVKVWE 563

Query: 320  GALSGQRQGQPVFITKLEGYRSASASETLAADWPMMMQIVRLISQDHMHNKQYVGKADFL 141
            G LSGQRQGQPVFIT+LEGYRSASASE+LAA+WP  MQIVRLISQDHM+NKQYVGKADFL
Sbjct: 564  GNLSGQRQGQPVFITRLEGYRSASASESLAANWPATMQIVRLISQDHMNNKQYVGKADFL 623

Query: 140  VFRALNQHGFLGQLQEKKLCAVIQLPSQTLLLSVSDKASRLIGMLF 3
            VFRA+NQHGFLGQLQEKKLCAVIQLPSQTLLLSVSDKA RLIGMLF
Sbjct: 624  VFRAMNQHGFLGQLQEKKLCAVIQLPSQTLLLSVSDKACRLIGMLF 669


>gb|KHG24986.1| Mediator of RNA polymerase II transcription subunit 25 [Gossypium
            arboreum]
          Length = 828

 Score =  437 bits (1125), Expect = e-120
 Identities = 238/347 (68%), Positives = 281/347 (80%), Gaps = 7/347 (2%)
 Frame = -1

Query: 1022 NVQEFKPMVGGLSQPLRPTGPAAANVNILNNLSQVRQAMNSA-----NSMGLQTMGATPM 858
            NVQE KP VGG++QPLRP  PAAANVNILNNLSQ R  MNSA      S+GLQ+MG TP+
Sbjct: 342  NVQEIKPSVGGMTQPLRPVPPAAANVNILNNLSQAR-VMNSAALSGGTSIGLQSMGQTPV 400

Query: 857  AMHMSNMISSGMASTALSPAQNVFSPGQSGSNTALSGSGSLVGNTQIAQNTTLGGFSSAT 678
            AMHMSNMISSGM S+ +  AQ VFS GQS   T+L GSG++ G TQ+  N+ L  F+SAT
Sbjct: 401  AMHMSNMISSGMTSS-VPLAQTVFSSGQSAM-TSLPGSGAVTGTTQVPPNSNLNSFASAT 458

Query: 677  SNMSVNPNHGMSQPMANLQGPVSLGQSAAG-INQGSLTGGQIGQAGIGMNQNIMSNGLGQ 501
            SN++ N N G+SQPM N+QG VS+GQS  G ++ G+ +G Q+ Q G+ M+Q++  +GLG 
Sbjct: 459  SNVAGNSNIGISQPMCNVQGAVSMGQSVPGSMSHGNHSGAQLVQTGVAMSQSM--SGLGP 516

Query: 500  PGVSAGSGTMIPTPGVPQQVQAGIQPLSVANTSTANMP-AQQTSGAMQSAPGPDKYVKVW 324
              VS+G+GT+IPTPG+ QQVQ+G+Q + V N S A+MP +QQTS A+QSA    KYVKVW
Sbjct: 517  STVSSGTGTLIPTPGLSQQVQSGMQTIGVNNNSAASMPLSQQTSSALQSAQS--KYVKVW 574

Query: 323  EGALSGQRQGQPVFITKLEGYRSASASETLAADWPMMMQIVRLISQDHMHNKQYVGKADF 144
            EG LSGQRQGQPVFIT+LEGYRSASASETLA+DWP  MQIVRLISQDHM+NKQYVGKADF
Sbjct: 575  EGNLSGQRQGQPVFITRLEGYRSASASETLASDWPQTMQIVRLISQDHMNNKQYVGKADF 634

Query: 143  LVFRALNQHGFLGQLQEKKLCAVIQLPSQTLLLSVSDKASRLIGMLF 3
            LVFRA+NQHGFLGQLQEKKLCAVIQLPSQTL+LSVSDKA RLIGMLF
Sbjct: 635  LVFRAMNQHGFLGQLQEKKLCAVIQLPSQTLMLSVSDKAYRLIGMLF 681


>ref|XP_012463728.1| PREDICTED: mediator of RNA polymerase II transcription subunit
            25-like isoform X4 [Gossypium raimondii]
          Length = 707

 Score =  437 bits (1123), Expect = e-120
 Identities = 234/345 (67%), Positives = 279/345 (80%), Gaps = 5/345 (1%)
 Frame = -1

Query: 1022 NVQEFKPMVGGLSQPLRPTGPAAANVNILNNLSQVR----QAMNSANSMGLQTMGATPMA 855
            N+QE KP V G++QP RP  PAAANVNILNNLSQ R     A+    S+GLQ+MG TP+A
Sbjct: 339  NMQELKPSVSGMTQPSRPVPPAAANVNILNNLSQARVMSSAALTGGTSIGLQSMGQTPVA 398

Query: 854  MHMSNMISSGMASTALSPAQNVFSPGQSGSNTALSGSGSLVGNTQIAQNTTLGGFSSATS 675
            MHMSNMISSGMAS+ + PA  V S GQ  + T+L+GSG+L G  Q+  N+ L  FSSA+S
Sbjct: 399  MHMSNMISSGMASS-VPPAHTVLSSGQP-TMTSLTGSGALTGTAQVPPNSGLSTFSSASS 456

Query: 674  NMSVNPNHGMSQPMANLQGPVSLGQSAAGINQGSLTGGQIGQAGIGMNQNIMSNGLGQPG 495
            N++ N N G+SQP  N+QG V++GQS  G++QG+ +G Q+ Q+G+GM+QN+  + LGQ  
Sbjct: 457  NVAGNSNIGISQPTGNVQGAVNIGQSVPGMSQGNHSGTQMMQSGVGMSQNM--SALGQST 514

Query: 494  VSAGSGTMIPTPGVPQQVQAGIQPLSVANTSTANMP-AQQTSGAMQSAPGPDKYVKVWEG 318
            VS+G+GTMIPTPG+ QQVQ+G+Q L V+N+S A+MP +QQTS A+QSA    KYVKVWEG
Sbjct: 515  VSSGNGTMIPTPGMSQQVQSGMQTLGVSNSSAASMPLSQQTSSALQSAQS--KYVKVWEG 572

Query: 317  ALSGQRQGQPVFITKLEGYRSASASETLAADWPMMMQIVRLISQDHMHNKQYVGKADFLV 138
             LSGQRQGQPVFIT+LEGYRSASASETLAA WP  MQIVRLISQDHM+NKQYVGKADFLV
Sbjct: 573  NLSGQRQGQPVFITRLEGYRSASASETLAAHWPQTMQIVRLISQDHMNNKQYVGKADFLV 632

Query: 137  FRALNQHGFLGQLQEKKLCAVIQLPSQTLLLSVSDKASRLIGMLF 3
            FRA+NQHGFLGQLQEKKLCAVIQLP QTLLLSVSDKA RLIGMLF
Sbjct: 633  FRAMNQHGFLGQLQEKKLCAVIQLPQQTLLLSVSDKACRLIGMLF 677


>ref|XP_012463727.1| PREDICTED: mediator of RNA polymerase II transcription subunit
            25-like isoform X3 [Gossypium raimondii]
          Length = 738

 Score =  437 bits (1123), Expect = e-120
 Identities = 234/345 (67%), Positives = 279/345 (80%), Gaps = 5/345 (1%)
 Frame = -1

Query: 1022 NVQEFKPMVGGLSQPLRPTGPAAANVNILNNLSQVR----QAMNSANSMGLQTMGATPMA 855
            N+QE KP V G++QP RP  PAAANVNILNNLSQ R     A+    S+GLQ+MG TP+A
Sbjct: 232  NMQELKPSVSGMTQPSRPVPPAAANVNILNNLSQARVMSSAALTGGTSIGLQSMGQTPVA 291

Query: 854  MHMSNMISSGMASTALSPAQNVFSPGQSGSNTALSGSGSLVGNTQIAQNTTLGGFSSATS 675
            MHMSNMISSGMAS+ + PA  V S GQ  + T+L+GSG+L G  Q+  N+ L  FSSA+S
Sbjct: 292  MHMSNMISSGMASS-VPPAHTVLSSGQP-TMTSLTGSGALTGTAQVPPNSGLSTFSSASS 349

Query: 674  NMSVNPNHGMSQPMANLQGPVSLGQSAAGINQGSLTGGQIGQAGIGMNQNIMSNGLGQPG 495
            N++ N N G+SQP  N+QG V++GQS  G++QG+ +G Q+ Q+G+GM+QN+  + LGQ  
Sbjct: 350  NVAGNSNIGISQPTGNVQGAVNIGQSVPGMSQGNHSGTQMMQSGVGMSQNM--SALGQST 407

Query: 494  VSAGSGTMIPTPGVPQQVQAGIQPLSVANTSTANMP-AQQTSGAMQSAPGPDKYVKVWEG 318
            VS+G+GTMIPTPG+ QQVQ+G+Q L V+N+S A+MP +QQTS A+QSA    KYVKVWEG
Sbjct: 408  VSSGNGTMIPTPGMSQQVQSGMQTLGVSNSSAASMPLSQQTSSALQSAQS--KYVKVWEG 465

Query: 317  ALSGQRQGQPVFITKLEGYRSASASETLAADWPMMMQIVRLISQDHMHNKQYVGKADFLV 138
             LSGQRQGQPVFIT+LEGYRSASASETLAA WP  MQIVRLISQDHM+NKQYVGKADFLV
Sbjct: 466  NLSGQRQGQPVFITRLEGYRSASASETLAAHWPQTMQIVRLISQDHMNNKQYVGKADFLV 525

Query: 137  FRALNQHGFLGQLQEKKLCAVIQLPSQTLLLSVSDKASRLIGMLF 3
            FRA+NQHGFLGQLQEKKLCAVIQLP QTLLLSVSDKA RLIGMLF
Sbjct: 526  FRAMNQHGFLGQLQEKKLCAVIQLPQQTLLLSVSDKACRLIGMLF 570


>gb|KJB80077.1| hypothetical protein B456_013G080300 [Gossypium raimondii]
          Length = 795

 Score =  437 bits (1123), Expect = e-120
 Identities = 234/345 (67%), Positives = 279/345 (80%), Gaps = 5/345 (1%)
 Frame = -1

Query: 1022 NVQEFKPMVGGLSQPLRPTGPAAANVNILNNLSQVR----QAMNSANSMGLQTMGATPMA 855
            N+QE KP V G++QP RP  PAAANVNILNNLSQ R     A+    S+GLQ+MG TP+A
Sbjct: 339  NMQELKPSVSGMTQPSRPVPPAAANVNILNNLSQARVMSSAALTGGTSIGLQSMGQTPVA 398

Query: 854  MHMSNMISSGMASTALSPAQNVFSPGQSGSNTALSGSGSLVGNTQIAQNTTLGGFSSATS 675
            MHMSNMISSGMAS+ + PA  V S GQ  + T+L+GSG+L G  Q+  N+ L  FSSA+S
Sbjct: 399  MHMSNMISSGMASS-VPPAHTVLSSGQP-TMTSLTGSGALTGTAQVPPNSGLSTFSSASS 456

Query: 674  NMSVNPNHGMSQPMANLQGPVSLGQSAAGINQGSLTGGQIGQAGIGMNQNIMSNGLGQPG 495
            N++ N N G+SQP  N+QG V++GQS  G++QG+ +G Q+ Q+G+GM+QN+  + LGQ  
Sbjct: 457  NVAGNSNIGISQPTGNVQGAVNIGQSVPGMSQGNHSGTQMMQSGVGMSQNM--SALGQST 514

Query: 494  VSAGSGTMIPTPGVPQQVQAGIQPLSVANTSTANMP-AQQTSGAMQSAPGPDKYVKVWEG 318
            VS+G+GTMIPTPG+ QQVQ+G+Q L V+N+S A+MP +QQTS A+QSA    KYVKVWEG
Sbjct: 515  VSSGNGTMIPTPGMSQQVQSGMQTLGVSNSSAASMPLSQQTSSALQSAQS--KYVKVWEG 572

Query: 317  ALSGQRQGQPVFITKLEGYRSASASETLAADWPMMMQIVRLISQDHMHNKQYVGKADFLV 138
             LSGQRQGQPVFIT+LEGYRSASASETLAA WP  MQIVRLISQDHM+NKQYVGKADFLV
Sbjct: 573  NLSGQRQGQPVFITRLEGYRSASASETLAAHWPQTMQIVRLISQDHMNNKQYVGKADFLV 632

Query: 137  FRALNQHGFLGQLQEKKLCAVIQLPSQTLLLSVSDKASRLIGMLF 3
            FRA+NQHGFLGQLQEKKLCAVIQLP QTLLLSVSDKA RLIGMLF
Sbjct: 633  FRAMNQHGFLGQLQEKKLCAVIQLPQQTLLLSVSDKACRLIGMLF 677


>gb|KJB80075.1| hypothetical protein B456_013G080300 [Gossypium raimondii]
          Length = 683

 Score =  437 bits (1123), Expect = e-120
 Identities = 234/345 (67%), Positives = 279/345 (80%), Gaps = 5/345 (1%)
 Frame = -1

Query: 1022 NVQEFKPMVGGLSQPLRPTGPAAANVNILNNLSQVR----QAMNSANSMGLQTMGATPMA 855
            N+QE KP V G++QP RP  PAAANVNILNNLSQ R     A+    S+GLQ+MG TP+A
Sbjct: 339  NMQELKPSVSGMTQPSRPVPPAAANVNILNNLSQARVMSSAALTGGTSIGLQSMGQTPVA 398

Query: 854  MHMSNMISSGMASTALSPAQNVFSPGQSGSNTALSGSGSLVGNTQIAQNTTLGGFSSATS 675
            MHMSNMISSGMAS+ + PA  V S GQ  + T+L+GSG+L G  Q+  N+ L  FSSA+S
Sbjct: 399  MHMSNMISSGMASS-VPPAHTVLSSGQP-TMTSLTGSGALTGTAQVPPNSGLSTFSSASS 456

Query: 674  NMSVNPNHGMSQPMANLQGPVSLGQSAAGINQGSLTGGQIGQAGIGMNQNIMSNGLGQPG 495
            N++ N N G+SQP  N+QG V++GQS  G++QG+ +G Q+ Q+G+GM+QN+  + LGQ  
Sbjct: 457  NVAGNSNIGISQPTGNVQGAVNIGQSVPGMSQGNHSGTQMMQSGVGMSQNM--SALGQST 514

Query: 494  VSAGSGTMIPTPGVPQQVQAGIQPLSVANTSTANMP-AQQTSGAMQSAPGPDKYVKVWEG 318
            VS+G+GTMIPTPG+ QQVQ+G+Q L V+N+S A+MP +QQTS A+QSA    KYVKVWEG
Sbjct: 515  VSSGNGTMIPTPGMSQQVQSGMQTLGVSNSSAASMPLSQQTSSALQSAQS--KYVKVWEG 572

Query: 317  ALSGQRQGQPVFITKLEGYRSASASETLAADWPMMMQIVRLISQDHMHNKQYVGKADFLV 138
             LSGQRQGQPVFIT+LEGYRSASASETLAA WP  MQIVRLISQDHM+NKQYVGKADFLV
Sbjct: 573  NLSGQRQGQPVFITRLEGYRSASASETLAAHWPQTMQIVRLISQDHMNNKQYVGKADFLV 632

Query: 137  FRALNQHGFLGQLQEKKLCAVIQLPSQTLLLSVSDKASRLIGMLF 3
            FRA+NQHGFLGQLQEKKLCAVIQLP QTLLLSVSDKA RLIGMLF
Sbjct: 633  FRAMNQHGFLGQLQEKKLCAVIQLPQQTLLLSVSDKACRLIGMLF 677