BLASTX nr result

ID: Papaver30_contig00001995 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver30_contig00001995
         (799 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_012454272.1| PREDICTED: mediator of RNA polymerase II tra...    59   3e-06
gb|KJB70652.1| hypothetical protein B456_011G085600 [Gossypium r...    59   3e-06
gb|KHG27230.1| Putative mediator of RNA polymerase II transcript...    59   3e-06
ref|XP_012444231.1| PREDICTED: mediator of RNA polymerase II tra...    59   5e-06
ref|XP_012444230.1| PREDICTED: mediator of RNA polymerase II tra...    59   5e-06
gb|KJB56578.1| hypothetical protein B456_009G126200 [Gossypium r...    59   5e-06
gb|KHG11822.1| putative tartrate dehydrogenase/decarboxylase ttu...    59   5e-06

>ref|XP_012454272.1| PREDICTED: mediator of RNA polymerase II transcription subunit 15a
           [Gossypium raimondii] gi|763803715|gb|KJB70653.1|
           hypothetical protein B456_011G085600 [Gossypium
           raimondii]
          Length = 1344

 Score = 59.3 bits (142), Expect = 3e-06
 Identities = 30/57 (52%), Positives = 40/57 (70%)
 Frame = -1

Query: 535 HENQMNSQMQPMILQNSGSSVQPTTMTSMNHGPPNLMGASTAQTNLLSSLQPGSTME 365
           H+NQMN Q+Q M LQ S  ++QP  MTSM H   +  G STAQ  +L+SLQPGS+++
Sbjct: 699 HDNQMNPQLQSMNLQGSVPTMQPNNMTSMQHNSLS-PGVSTAQQTMLNSLQPGSSLD 754


>gb|KJB70652.1| hypothetical protein B456_011G085600 [Gossypium raimondii]
          Length = 1197

 Score = 59.3 bits (142), Expect = 3e-06
 Identities = 30/57 (52%), Positives = 40/57 (70%)
 Frame = -1

Query: 535 HENQMNSQMQPMILQNSGSSVQPTTMTSMNHGPPNLMGASTAQTNLLSSLQPGSTME 365
           H+NQMN Q+Q M LQ S  ++QP  MTSM H   +  G STAQ  +L+SLQPGS+++
Sbjct: 699 HDNQMNPQLQSMNLQGSVPTMQPNNMTSMQHNSLS-PGVSTAQQTMLNSLQPGSSLD 754


>gb|KHG27230.1| Putative mediator of RNA polymerase II transcription subunit 15
           [Gossypium arboreum]
          Length = 1064

 Score = 59.3 bits (142), Expect = 3e-06
 Identities = 30/57 (52%), Positives = 40/57 (70%)
 Frame = -1

Query: 535 HENQMNSQMQPMILQNSGSSVQPTTMTSMNHGPPNLMGASTAQTNLLSSLQPGSTME 365
           H+NQMN Q+Q M LQ S  ++QP  MTSM H   +  G STAQ  +L+SLQPGS+++
Sbjct: 573 HDNQMNPQLQSMNLQGSVPTMQPNNMTSMQHNSLS-PGVSTAQQTMLNSLQPGSSLD 628


>ref|XP_012444231.1| PREDICTED: mediator of RNA polymerase II transcription subunit
           15a-like isoform X2 [Gossypium raimondii]
          Length = 1210

 Score = 58.5 bits (140), Expect = 5e-06
 Identities = 29/58 (50%), Positives = 40/58 (68%), Gaps = 1/58 (1%)
 Frame = -1

Query: 535 HENQMNSQMQPMILQNSGSSVQPTTMTSMNHGP-PNLMGASTAQTNLLSSLQPGSTME 365
           H+NQMN Q+Q + LQ S  ++QP  MTS+ H    +L G STAQ  +L+SLQPGS ++
Sbjct: 573 HDNQMNPQLQSINLQGSMPTMQPNNMTSLQHNTLSSLPGVSTAQQTMLNSLQPGSNLD 630


>ref|XP_012444230.1| PREDICTED: mediator of RNA polymerase II transcription subunit
           15a-like isoform X1 [Gossypium raimondii]
           gi|763789583|gb|KJB56579.1| hypothetical protein
           B456_009G126200 [Gossypium raimondii]
          Length = 1333

 Score = 58.5 bits (140), Expect = 5e-06
 Identities = 29/58 (50%), Positives = 40/58 (68%), Gaps = 1/58 (1%)
 Frame = -1

Query: 535 HENQMNSQMQPMILQNSGSSVQPTTMTSMNHGP-PNLMGASTAQTNLLSSLQPGSTME 365
           H+NQMN Q+Q + LQ S  ++QP  MTS+ H    +L G STAQ  +L+SLQPGS ++
Sbjct: 696 HDNQMNPQLQSINLQGSMPTMQPNNMTSLQHNTLSSLPGVSTAQQTMLNSLQPGSNLD 753


>gb|KJB56578.1| hypothetical protein B456_009G126200 [Gossypium raimondii]
          Length = 1183

 Score = 58.5 bits (140), Expect = 5e-06
 Identities = 29/58 (50%), Positives = 40/58 (68%), Gaps = 1/58 (1%)
 Frame = -1

Query: 535 HENQMNSQMQPMILQNSGSSVQPTTMTSMNHGP-PNLMGASTAQTNLLSSLQPGSTME 365
           H+NQMN Q+Q + LQ S  ++QP  MTS+ H    +L G STAQ  +L+SLQPGS ++
Sbjct: 696 HDNQMNPQLQSINLQGSMPTMQPNNMTSLQHNTLSSLPGVSTAQQTMLNSLQPGSNLD 753


>gb|KHG11822.1| putative tartrate dehydrogenase/decarboxylase ttuC [Gossypium
           arboreum]
          Length = 634

 Score = 58.5 bits (140), Expect = 5e-06
 Identities = 29/58 (50%), Positives = 40/58 (68%), Gaps = 1/58 (1%)
 Frame = -1

Query: 535 HENQMNSQMQPMILQNSGSSVQPTTMTSMNHGP-PNLMGASTAQTNLLSSLQPGSTME 365
           H+NQMN Q+Q + LQ S  ++QP  MTS+ H    +L G STAQ  +L+SLQPGS ++
Sbjct: 116 HDNQMNPQLQSINLQGSMPTMQPNNMTSLQHNTLSSLPGVSTAQQTMLNSLQPGSNLD 173


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