BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver30_contig00001357
         (3551 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AKN34497.1| phytochrome, partial [Laurelia sempervirens]          1196   0.0  
ref|XP_007214557.1| hypothetical protein PRUPE_ppa000491mg [Prun...  1162   0.0  
ref|XP_002519749.1| phytochrome B, putative [Ricinus communis] g...  1160   0.0  
ref|XP_012091887.1| PREDICTED: phytochrome E isoform X2 [Jatroph...  1157   0.0  
ref|XP_007025187.1| Phytochrome E isoform 1 [Theobroma cacao] gi...  1157   0.0  
ref|XP_007214556.1| hypothetical protein PRUPE_ppa000491mg [Prun...  1156   0.0  
ref|XP_008371559.1| PREDICTED: phytochrome E-like [Malus domestica]  1155   0.0  
ref|XP_012091888.1| PREDICTED: phytochrome E isoform X3 [Jatroph...  1154   0.0  
ref|XP_012091885.1| PREDICTED: phytochrome E isoform X1 [Jatroph...  1154   0.0  
ref|XP_009352111.1| PREDICTED: phytochrome E-like [Pyrus x brets...  1153   0.0  
ref|XP_008225375.1| PREDICTED: phytochrome E isoform X2 [Prunus ...  1152   0.0  
ref|XP_010100997.1| Phytochrome E [Morus notabilis] gi|587898137...  1151   0.0  
gb|AKN34495.1| phytochrome, partial [Capnoides sempervirens]         1149   0.0  
ref|XP_008225374.1| PREDICTED: phytochrome E isoform X1 [Prunus ...  1148   0.0  
ref|XP_012454413.1| PREDICTED: phytochrome E isoform X1 [Gossypi...  1147   0.0  
gb|KHG11315.1| Phytochrome E [Gossypium arboreum]                    1145   0.0  
ref|XP_012454415.1| PREDICTED: phytochrome E isoform X2 [Gossypi...  1142   0.0  
gb|ACC60972.1| phytochrome E [Vitis riparia]                         1136   0.0  
ref|XP_006449616.1| hypothetical protein CICLE_v10014092mg [Citr...  1129   0.0  
ref|XP_002271671.1| PREDICTED: phytochrome E [Vitis vinifera] gi...  1129   0.0  

>gb|AKN34497.1| phytochrome, partial [Laurelia sempervirens]
          Length = 1119

 Score = 1196 bits (3095), Expect = 0.0
 Identities = 610/908 (67%), Positives = 706/908 (77%), Gaps = 15/908 (1%)
 Frame = +1

Query: 1    QSQRFAVQAISRLQSVPGGDIGVACDTLVEDVRVLTGYDRVMVYKFYEDEHGEVISEIRR 180
            QSQ+ AV+AISRLQS PGGDIGV CDT+V+DV+ LTGYDRVMVYKF+EDEHGEV+SEIRR
Sbjct: 202  QSQKLAVRAISRLQSPPGGDIGVLCDTVVQDVQELTGYDRVMVYKFHEDEHGEVLSEIRR 261

Query: 181  SDLEPYLGLHYPATDIPQAARFLFQQNRVRMIYDCHSDPVPIIQSQELKQPLLLVNSTLR 360
            SDLEPYLGLHYPATDIPQA+RFLF+QNRVRMI DCH++PV +IQ+QELKQPL LVNSTLR
Sbjct: 262  SDLEPYLGLHYPATDIPQASRFLFKQNRVRMICDCHANPVKVIQAQELKQPLCLVNSTLR 321

Query: 361  SPHACHTQYMANMGSIASLVMAILINENGSLKLWGLVACHHCSPRYVPFPLGYACEFLIQ 540
            SPH CHTQYMANMGSIASL MA+ IN N S+KLWGLV CHH S RYVPFPL YACEFL+Q
Sbjct: 322  SPHGCHTQYMANMGSIASLAMAVTINGNDSMKLWGLVVCHHTSSRYVPFPLRYACEFLMQ 381

Query: 541  AFGLHLHRELILVSQLEEKKTLKTQTLLCDMLLRDVPFGIVTKSPNIMDLVKCDGAALYY 720
            AFGL L+ EL L SQL EKK L+TQTLLCDMLLRD PFGI T+SP+IMDLVKCDG+ALYY
Sbjct: 382  AFGLQLNMELQLASQLAEKKILRTQTLLCDMLLRDAPFGIATQSPSIMDLVKCDGSALYY 441

Query: 721  DGKCQLLGVTPNEKQIQDIADWLLTYDSESTGFTTDSLVDAGYPGAELLLDVVCGMATVR 900
             G C LLGVTP E QI+DIADWLLTY  +STG +TDSL DAGYPGA  L D VCGMAT R
Sbjct: 442  GGGCWLLGVTPTEAQIKDIADWLLTYHGDSTGLSTDSLADAGYPGAASLGDAVCGMATAR 501

Query: 901  INSTDFLFWFRSRTEKVVKWGGAKHHLEDKDNDGKMHPRSSFKAFLEEVKYRSLPWELLE 1080
            I S DFLFWFRS T K VKWGGAKHH EDKDN G+MHPRSSFKAFLE VK RS+PWE+ E
Sbjct: 502  ITSKDFLFWFRSHTAKEVKWGGAKHHPEDKDNGGRMHPRSSFKAFLEVVKSRSMPWEISE 561

Query: 1081 MNAIHSLQLIMRG------QSGTGMSIERQ---LMTERVDELRSVASKMVNLIETAIVPV 1233
            MNAIHSLQLIMRG       SG    I  Q   L  + V+EL SVAS+MV LIETA  P+
Sbjct: 562  MNAIHSLQLIMRGSFQDIEDSGAKTMIRAQLDDLEMQGVNELSSVASEMVRLIETATAPI 621

Query: 1234 IAVDSDGNVNGWNTKVAELTGLPDNGALGKSLINELVHEESRETVDNHLSRALQGEESKN 1413
             AVDS G +NGWN K AELTGLP N A+GKSL++ LVHE+S E V  HL RAL G E KN
Sbjct: 622  FAVDSAGLINGWNAKTAELTGLPRNEAMGKSLVHNLVHEDSCEVVKKHLFRALGGNEDKN 681

Query: 1414 VQIKLRTFGSQQQNEAVYIVANACTTKNCTGNVIGVSFMGQDVTKEKALMDKFIRLQGDY 1593
            V++KL+TFGSQQQN AV++VANAC++K+ T  V+GV F+GQDVT EK +MDKFIRL+GDY
Sbjct: 682  VELKLKTFGSQQQNPAVFVVANACSSKDYTNRVVGVCFVGQDVTGEKIVMDKFIRLEGDY 741

Query: 1594 KAIIQSLDPLIPPIFASDENACCCEWNTAMEKLTGWTKGEAIGKILAGEIFGKLCQLKDQ 1773
            KAIIQSL+PLIPPIFASDEN CC EWN AMEKLTGW +GE IGK+L GEIFG  C+LK Q
Sbjct: 742  KAIIQSLNPLIPPIFASDENTCCSEWNAAMEKLTGWARGEVIGKMLIGEIFGSFCRLKGQ 801

Query: 1774 GAITEFMILLYQAICSHVTLKFPFAFFDKRGKYCKFVLTANKRVDMEGNIIGCFCFLQMA 1953
              +T+FMILLY AI    T KFPF+FFD +G+Y + +LTANKR D EG+  GCFCFLQ A
Sbjct: 802  DTLTKFMILLYSAIAGQDTEKFPFSFFDSKGRYVEALLTANKRTDTEGHANGCFCFLQTA 861

Query: 1954 VPNLIQ--DVQNQQERKCLARLKELAYIQEETKAPLGGVRFAHRLLESSSLSDQMKRLLK 2127
            +P+L Q  +V   QERKC ARLKELAYI++E K PL G+RF H+LLE++ +S   K+ L+
Sbjct: 862  IPDLQQALEVHRHQERKCFARLKELAYIKQEMKNPLNGIRFTHKLLETTCVSGDQKQFLE 921

Query: 2128 TSDACEKQMVKIIEDCSL----ESIEKRSMELHKDWFSLGIAMDAIISQVMILLTEKKLQ 2295
            +S ACEKQM+KIIED  L    ESI+   M+L+   F LG  MDAI SQVM+LL EK LQ
Sbjct: 922  SSAACEKQMMKIIEDVDLESIVESIDDGYMDLNMADFLLGNVMDAIFSQVMLLLREKNLQ 981

Query: 2296 LNYEISEKTKVLSIYGDQIRXXXXXXXXXXXXXXXXSSSPEGWVNIEVELNSVLYQDSGP 2475
               +I E+ K++S+YGDQIR                +  P+GWV IEV     L +D   
Sbjct: 982  FIRKIPEQIKMMSLYGDQIR-LQQILGDFLLNIVHHAPCPDGWVEIEVAPCLRLIEDGIE 1040

Query: 2476 VLQLQFRLAHPGEGLPPELVQDMVSGGTLWSSPEGVGLSLSRKLLRMMNGQIRYIREPTK 2655
            V+ LQFR+ HPGEGLP ELV DM  G  L ++ EG+GL +SRKLL+MM G I+YIRE TK
Sbjct: 1041 VVNLQFRMTHPGEGLPSELVHDMFHGNQL-ATQEGIGLGMSRKLLKMMKGHIQYIRETTK 1099

Query: 2656 CFFLIHIK 2679
            C+FLI I+
Sbjct: 1100 CYFLIDIE 1107


>ref|XP_007214557.1| hypothetical protein PRUPE_ppa000491mg [Prunus persica]
            gi|462410422|gb|EMJ15756.1| hypothetical protein
            PRUPE_ppa000491mg [Prunus persica]
          Length = 1130

 Score = 1162 bits (3005), Expect = 0.0
 Identities = 577/912 (63%), Positives = 709/912 (77%), Gaps = 13/912 (1%)
 Frame = +1

Query: 1    QSQRFAVQAISRLQSVPGGDIGVACDTLVEDVRVLTGYDRVMVYKFYEDEHGEVISEIRR 180
            QSQ+ AV+AISRLQS+PGGDIGV CDT+VEDV+ LTGYDRVMVYKF+ED+HGEV+SEIRR
Sbjct: 210  QSQKLAVRAISRLQSLPGGDIGVLCDTVVEDVQKLTGYDRVMVYKFHEDDHGEVVSEIRR 269

Query: 181  SDLEPYLGLHYPATDIPQAARFLFQQNRVRMIYDCHSDPVPIIQSQELKQPLLLVNSTLR 360
            +DLE YLGLHYPATDIPQAARFLF+QNRVRMI DC+++PV IIQS+ELKQPL LVNSTLR
Sbjct: 270  ADLESYLGLHYPATDIPQAARFLFKQNRVRMICDCNANPVKIIQSEELKQPLCLVNSTLR 329

Query: 361  SPHACHTQYMANMGSIASLVMAILINENGSLKLWGLVACHHCSPRYVPFPLGYACEFLIQ 540
            SPH CH QYMANMGSIASLVMA++IN N S KLWGLV CHH SPRYVPFPL YACEFL+Q
Sbjct: 330  SPHGCHRQYMANMGSIASLVMAVIINGNDSTKLWGLVVCHHTSPRYVPFPLRYACEFLMQ 389

Query: 541  AFGLHLHRELILVSQLEEKKTLKTQTLLCDMLLRDVPFGIVTKSPNIMDLVKCDGAALYY 720
            AFGL L+ EL L +QL EKK L+TQTLLCDMLLRD P GIVT+SP+IMDLVKCDGAALYY
Sbjct: 390  AFGLQLYMELQLAAQLAEKKVLRTQTLLCDMLLRDAPSGIVTQSPSIMDLVKCDGAALYY 449

Query: 721  DGKCQLLGVTPNEKQIQDIADWLLTYDSESTGFTTDSLVDAGYPGAELLLDVVCGMATVR 900
             G C LLGVTP E Q++DIA+WLL+   +STG +TDSL +AGYPGA LL D VCGMAT R
Sbjct: 450  GGTCWLLGVTPTESQVKDIAEWLLSNHGDSTGLSTDSLAEAGYPGAPLLGDAVCGMATAR 509

Query: 901  INSTDFLFWFRSRTEKVVKWGGAKHHLEDKDNDGKMHPRSSFKAFLEEVKYRSLPWELLE 1080
             +S DFLFWFRS T + VKWGGAKHH E KD+ G+MHPRSSFKAFLE VK RSLPWE+ E
Sbjct: 510  ASSKDFLFWFRSHTAEEVKWGGAKHHPEAKDDGGRMHPRSSFKAFLEVVKSRSLPWEVSE 569

Query: 1081 MNAIHSLQLIMRG-----QSGTGMSI------ERQLMTERVDELRSVASKMVNLIETAIV 1227
            +NAIHSLQLIMR      +     +I      + ++  + +DEL SVA +MV LIETA V
Sbjct: 570  INAIHSLQLIMRDSFQDMEESVSKAINNAHQSDTEMQPQGIDELSSVACEMVKLIETASV 629

Query: 1228 PVIAVDSDGNVNGWNTKVAELTGLPDNGALGKSLINELVHEESRETVDNHLSRALQGEES 1407
            P+  VDS G +NGWNTK+AELTGL D+ A+GKSL NE+V E+SRE V++ L RALQGEE 
Sbjct: 630  PIFGVDSAGLINGWNTKMAELTGLQDSEAMGKSLANEIVCEDSREAVEDLLCRALQGEED 689

Query: 1408 KNVQIKLRTFGSQQQNEAVYIVANACTTKNCTGNVIGVSFMGQDVTKEKALMDKFIRLQG 1587
            KN+++KLR FG  Q N  VY+VAN CT++N   NV+GV F+GQD+T EK +MDKFIRLQG
Sbjct: 690  KNIELKLRNFGHSQHNSVVYVVANTCTSRNHAKNVVGVCFVGQDITCEKVVMDKFIRLQG 749

Query: 1588 DYKAIIQSLDPLIPPIFASDENACCCEWNTAMEKLTGWTKGEAIGKILAGEIFGKLCQLK 1767
            DYKAIIQSL+PLIPPIFASDENACC EWN AMEKLTGWT+ + IGK+L GEIFG  C+LK
Sbjct: 750  DYKAIIQSLNPLIPPIFASDENACCSEWNAAMEKLTGWTRDDVIGKMLPGEIFGGFCRLK 809

Query: 1768 DQGAITEFMILLYQAICSHVTLKFPFAFFDKRGKYCKFVLTANKRVDMEGNIIGCFCFLQ 1947
             Q  +T+FMI+LYQ I      KFP  FFD++G + + +LTA+KR D  GNIIGCFCFLQ
Sbjct: 810  GQDTLTKFMIILYQGISGQDIEKFPLGFFDRKGNFVEVILTASKRTDGGGNIIGCFCFLQ 869

Query: 1948 MAVPNLIQDVQ--NQQERKCLARLKELAYIQEETKAPLGGVRFAHRLLESSSLSDQMKRL 2121
            +++P+L Q ++   Q+ R+  ++LKEL Y+++E K PL G+RF HRLL+++++S+  K+ 
Sbjct: 870  ISLPDLQQPLEGHKQEGREGFSKLKELTYMRQEMKNPLNGIRFTHRLLQNTTISEYQKQF 929

Query: 2122 LKTSDACEKQMVKIIEDCSLESIEKRSMELHKDWFSLGIAMDAIISQVMILLTEKKLQLN 2301
            L TSDACE+Q++ IIED ++ SIE+ S++L+   F LG  +DAI+SQ MI L EK LQL 
Sbjct: 930  LDTSDACERQIMTIIEDMNMRSIEEGSVKLNMGEFVLGNILDAIVSQSMISLREKNLQLF 989

Query: 2302 YEISEKTKVLSIYGDQIRXXXXXXXXXXXXXXXXSSSPEGWVNIEVELNSVLYQDSGPVL 2481
            +EI E+ K LS++GDQIR                + SP+GWV I++     L QD    +
Sbjct: 990  HEIPEEVKSLSLHGDQIR-LQLVLSDFLLNVVNHAPSPDGWVEIKILPGLKLIQDGNNCI 1048

Query: 2482 QLQFRLAHPGEGLPPELVQDMVSGGTLWSSPEGVGLSLSRKLLRMMNGQIRYIREPTKCF 2661
            +LQFR+ HPG+GLP  L++DM  GG  W++ EG+GL+LSRKLL  MNGQ++Y+RE  KC+
Sbjct: 1049 RLQFRMTHPGQGLPAALIRDMFEGGNRWTTQEGLGLNLSRKLLNRMNGQVQYVREHDKCY 1108

Query: 2662 FLIHIKFPTTWE 2697
            FLI ++  T  E
Sbjct: 1109 FLIDLELKTRKE 1120


>ref|XP_002519749.1| phytochrome B, putative [Ricinus communis]
            gi|223541166|gb|EEF42722.1| phytochrome B, putative
            [Ricinus communis]
          Length = 1131

 Score = 1160 bits (3002), Expect = 0.0
 Identities = 577/904 (63%), Positives = 700/904 (77%), Gaps = 11/904 (1%)
 Frame = +1

Query: 1    QSQRFAVQAISRLQSVPGGDIGVACDTLVEDVRVLTGYDRVMVYKFYEDEHGEVISEIRR 180
            QSQ+ AV+AISRLQS+PGGDIG+ CDT+VEDV+ LTGYDRVMVYKF++D+HGEV+SEIRR
Sbjct: 207  QSQKLAVRAISRLQSLPGGDIGMLCDTVVEDVQKLTGYDRVMVYKFHDDDHGEVLSEIRR 266

Query: 181  SDLEPYLGLHYPATDIPQAARFLFQQNRVRMIYDCHSDPVPIIQSQELKQPLLLVNSTLR 360
            SDLEPYLGLHYPATDIPQAARFLF+QNRVRMI DCH++PV +IQS+ELK PL LVNSTLR
Sbjct: 267  SDLEPYLGLHYPATDIPQAARFLFKQNRVRMICDCHANPVRVIQSEELKHPLCLVNSTLR 326

Query: 361  SPHACHTQYMANMGSIASLVMAILINENGSLKLWGLVACHHCSPRYVPFPLGYACEFLIQ 540
            SPH CHTQYMANMGSIASLVMA++IN N S KLWGLV CHH SPRYVPFPL YACEFL+Q
Sbjct: 327  SPHGCHTQYMANMGSIASLVMAVVINGNDSTKLWGLVVCHHTSPRYVPFPLRYACEFLMQ 386

Query: 541  AFGLHLHRELILVSQLEEKKTLKTQTLLCDMLLRDVPFGIVTKSPNIMDLVKCDGAALYY 720
            AFGL L+ EL L ++L EKK L+TQTLLCDMLLRD PFGIVT+SP+IMDLVKCDGAALYY
Sbjct: 387  AFGLQLYMELQLAAKLVEKKILQTQTLLCDMLLRDAPFGIVTQSPSIMDLVKCDGAALYY 446

Query: 721  DGKCQLLGVTPNEKQIQDIADWLLTYDSESTGFTTDSLVDAGYPGAELLLDVVCGMATVR 900
             GKC LLG+TP E Q++DIADWLL    +STG TTDSL DAGYPGA LL D VCGMAT R
Sbjct: 447  RGKCWLLGITPTESQVKDIADWLLNNHGDSTGLTTDSLADAGYPGALLLGDAVCGMATAR 506

Query: 901  INSTDFLFWFRSRTEKVVKWGGAKHHLEDKDNDGKMHPRSSFKAFLEEVKYRSLPWELLE 1080
            I S DFLFWFRS T K +KWGGAKHH EDKD+  +MHPRSSF AFLE VK RS+PWE+ E
Sbjct: 507  ITSRDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFNAFLEVVKSRSMPWEVSE 566

Query: 1081 MNAIHSLQLIMR-------GQSGTGMSIERQLMT--ERVDELRSVASKMVNLIETAIVPV 1233
            +NAIHSLQLIMR         +   M   +Q  T  + +DEL SVA +MV LIETA  P+
Sbjct: 567  INAIHSLQLIMRDSFQDMEDSASKAMVNAQQTDTDVQGIDELSSVACEMVRLIETATAPI 626

Query: 1234 IAVDSDGNVNGWNTKVAELTGLPDNGALGKSLINELVHEESRETVDNHLSRALQGEESKN 1413
              VDS G+VNGWN K+AELTGL  + A+GKSL+ E+VH++S E V++ L RALQGEE KN
Sbjct: 627  FGVDSAGSVNGWNAKIAELTGLQASEAMGKSLVREVVHKDSYEFVESLLCRALQGEEDKN 686

Query: 1414 VQIKLRTFGSQQQNEAVYIVANACTTKNCTGNVIGVSFMGQDVTKEKALMDKFIRLQGDY 1593
            V++KLR FG  QQN AV++VANACT+++   NVIGV F+GQDVT EK +MDKF+RLQGDY
Sbjct: 687  VELKLRKFGLHQQNSAVFVVANACTSRDYANNVIGVCFVGQDVTSEKIVMDKFLRLQGDY 746

Query: 1594 KAIIQSLDPLIPPIFASDENACCCEWNTAMEKLTGWTKGEAIGKILAGEIFGKLCQLKDQ 1773
            K II+SL+PLIPPIFASDENACCCEWN AME+LTG T+ E IGK+L GEIFG LC+LKDQ
Sbjct: 747  KVIIESLNPLIPPIFASDENACCCEWNAAMERLTGRTRQEVIGKMLPGEIFGGLCRLKDQ 806

Query: 1774 GAITEFMILLYQAICSHVTLKFPFAFFDKRGKYCKFVLTANKRVDMEGNIIGCFCFLQMA 1953
              +T+FMILLY+ +    T KFPF FF+++GK+ +  LTANKR D +G  IGCFCFLQ+ 
Sbjct: 807  DTLTKFMILLYRGLSDQDTDKFPFGFFNRQGKFVEVFLTANKRTDADGKTIGCFCFLQVI 866

Query: 1954 VPNLIQ--DVQNQQERKCLARLKELAYIQEETKAPLGGVRFAHRLLESSSLSDQMKRLLK 2127
             P+L Q  D   Q++++ L +LK+LAYI+EE K+PL G+RF H+LLE ++ S+  K+ L+
Sbjct: 867  GPDLQQTLDEHKQEDQESLLKLKQLAYIREEMKSPLSGIRFTHKLLEDTATSEHQKQFLE 926

Query: 2128 TSDACEKQMVKIIEDCSLESIEKRSMELHKDWFSLGIAMDAIISQVMILLTEKKLQLNYE 2307
            TSDACEKQ++ IIED  L  +E+  +EL  + F L   +DAI+SQ+M+LL E+ +QL +E
Sbjct: 927  TSDACEKQIMTIIEDIDLAKLEEGKIELKVEEFFLVNVLDAIVSQIMLLLRERSIQLFHE 986

Query: 2308 ISEKTKVLSIYGDQIRXXXXXXXXXXXXXXXXSSSPEGWVNIEVELNSVLYQDSGPVLQL 2487
            I E+ K +S+YGDQIR                + SP+GWV I+V     L QDS   L++
Sbjct: 987  IPEEIKTVSVYGDQIR-LQLVLSDFLLSVVRHAPSPDGWVEIKVSSGLKLMQDSHEFLRV 1045

Query: 2488 QFRLAHPGEGLPPELVQDMVSGGTLWSSPEGVGLSLSRKLLRMMNGQIRYIREPTKCFFL 2667
            Q R+ HPG+GLP  L +DM   G  W++ EG+ L LSRKLL  MNG + Y RE  KCFFL
Sbjct: 1046 QIRMTHPGQGLPSALTEDMFEEGNCWTTQEGLALKLSRKLLHQMNGHVHYTREHNKCFFL 1105

Query: 2668 IHIK 2679
            I ++
Sbjct: 1106 IDLE 1109


>ref|XP_012091887.1| PREDICTED: phytochrome E isoform X2 [Jatropha curcas]
            gi|643704134|gb|KDP21198.1| hypothetical protein
            JCGZ_21669 [Jatropha curcas]
          Length = 1126

 Score = 1157 bits (2993), Expect = 0.0
 Identities = 576/904 (63%), Positives = 692/904 (76%), Gaps = 11/904 (1%)
 Frame = +1

Query: 1    QSQRFAVQAISRLQSVPGGDIGVACDTLVEDVRVLTGYDRVMVYKFYEDEHGEVISEIRR 180
            QSQ+ AV+AISRLQS+PGGD+GV CD++VEDV+ LTGYDRVMVYKF++D+HGEV+SEIRR
Sbjct: 207  QSQKLAVRAISRLQSLPGGDVGVLCDSVVEDVQKLTGYDRVMVYKFHDDDHGEVVSEIRR 266

Query: 181  SDLEPYLGLHYPATDIPQAARFLFQQNRVRMIYDCHSDPVPIIQSQELKQPLLLVNSTLR 360
            SDLEPYLGLHYPATDIPQAARFLF+QNRVRMI DCH++PV IIQS+ELK PL LVNSTLR
Sbjct: 267  SDLEPYLGLHYPATDIPQAARFLFKQNRVRMICDCHANPVRIIQSEELKHPLCLVNSTLR 326

Query: 361  SPHACHTQYMANMGSIASLVMAILINENGSLKLWGLVACHHCSPRYVPFPLGYACEFLIQ 540
            SPH CHTQYMANMGSIASLVMA++IN N S KLWGLV CHH SPR VPFPL YACEFL+Q
Sbjct: 327  SPHGCHTQYMANMGSIASLVMAVIINGNDSTKLWGLVVCHHTSPRTVPFPLRYACEFLMQ 386

Query: 541  AFGLHLHRELILVSQLEEKKTLKTQTLLCDMLLRDVPFGIVTKSPNIMDLVKCDGAALYY 720
            AFGL L+ EL L  +  EK+ L+TQTLLCDMLLRD PFGIVT+SP++MDLVKCDGAALYY
Sbjct: 387  AFGLQLYMELQLAERSAEKRILRTQTLLCDMLLRDAPFGIVTQSPSVMDLVKCDGAALYY 446

Query: 721  DGKCQLLGVTPNEKQIQDIADWLLTYDSESTGFTTDSLVDAGYPGAELLLDVVCGMATVR 900
             GKC LLG+TP E Q++DIA+WLL    +STG +TDSL DAGYPGA LL D VCGMAT R
Sbjct: 447  GGKCWLLGITPTESQVKDIAEWLLNNHGDSTGLSTDSLADAGYPGAALLGDAVCGMATAR 506

Query: 901  INSTDFLFWFRSRTEKVVKWGGAKHHLEDKDNDGKMHPRSSFKAFLEEVKYRSLPWELLE 1080
            I S DFLFWFRS + K VKWGGAKHH EDKD+  +MHPRSSF AFLE VK RSLPWE+ E
Sbjct: 507  ITSRDFLFWFRSHSAKEVKWGGAKHHPEDKDDGQRMHPRSSFNAFLEVVKSRSLPWEVSE 566

Query: 1081 MNAIHSLQLIMR---------GQSGTGMSIERQLMTERVDELRSVASKMVNLIETAIVPV 1233
            +NAIHSLQLIMR         G           +  + +DEL SVA +MV LIETA  P+
Sbjct: 567  INAIHSLQLIMRDSFQDMEDSGSKAIVYDRRTDIEMQGIDELSSVACEMVRLIETATAPI 626

Query: 1234 IAVDSDGNVNGWNTKVAELTGLPDNGALGKSLINELVHEESRETVDNHLSRALQGEESKN 1413
              VDS G +NGWN+KVAELTGL  + A+GKSL++E+VHE+SR  V++ L RALQGEE KN
Sbjct: 627  FGVDSAGLINGWNSKVAELTGLQTSAAMGKSLVHEIVHEDSRGVVESLLCRALQGEEDKN 686

Query: 1414 VQIKLRTFGSQQQNEAVYIVANACTTKNCTGNVIGVSFMGQDVTKEKALMDKFIRLQGDY 1593
            V++KLR FG  QQN A+Y+V NACT+++   NVIGV F+GQD+T EK  MDKF+RLQGDY
Sbjct: 687  VELKLRKFGLHQQNSAIYVVVNACTSRDYANNVIGVCFVGQDITPEKLFMDKFLRLQGDY 746

Query: 1594 KAIIQSLDPLIPPIFASDENACCCEWNTAMEKLTGWTKGEAIGKILAGEIFGKLCQLKDQ 1773
            K II+SL PLIPPIFASDENACCCEWN AMEKLTG T+ E IGK+L  EIFG LC+LKDQ
Sbjct: 747  KTIIESLSPLIPPIFASDENACCCEWNAAMEKLTGTTRQEVIGKMLPAEIFGGLCRLKDQ 806

Query: 1774 GAITEFMILLYQAICSHVTLKFPFAFFDKRGKYCKFVLTANKRVDMEGNIIGCFCFLQMA 1953
              +T+FMILLY+ I    T KFPF FF+ +GK+ +  LT NKR   +G+IIGCFCFLQ  
Sbjct: 807  DTLTKFMILLYRGISGQDTEKFPFGFFNGQGKFVEVFLTVNKRTGPDGSIIGCFCFLQTV 866

Query: 1954 VPN--LIQDVQNQQERKCLARLKELAYIQEETKAPLGGVRFAHRLLESSSLSDQMKRLLK 2127
             P+  L  D   Q+E+    +LKELAYIQ+E K PL G+RF H+LLE +S+S+  K+ L+
Sbjct: 867  EPDLQLALDGHTQEEQVSFLKLKELAYIQQEMKNPLSGIRFTHKLLEDTSISEHQKQFLE 926

Query: 2128 TSDACEKQMVKIIEDCSLESIEKRSMELHKDWFSLGIAMDAIISQVMILLTEKKLQLNYE 2307
            TSDACEKQ++ IIED  L  +EK ++EL  + F LG  +DAIISQVMILL E+ LQL +E
Sbjct: 927  TSDACEKQIMAIIEDMDLARLEKGNIELKMEEFLLGNVLDAIISQVMILLRERNLQLFHE 986

Query: 2308 ISEKTKVLSIYGDQIRXXXXXXXXXXXXXXXXSSSPEGWVNIEVELNSVLYQDSGPVLQL 2487
            I E+ K LS+YGDQIR                +  P+GWV I+V     L +D    ++L
Sbjct: 987  IPEEIKTLSLYGDQIR-LQLILSDILLSVVHHAPVPDGWVEIKVSPGLTLIKDGNEFMRL 1045

Query: 2488 QFRLAHPGEGLPPELVQDMVSGGTLWSSPEGVGLSLSRKLLRMMNGQIRYIREPTKCFFL 2667
            Q R+ HPG+GLP  LV+DM +GG  +S+ EG+GL+LS+KLL  MNG +RY RE  KC+FL
Sbjct: 1046 QIRMTHPGKGLPSALVEDMFAGGNQYSTQEGLGLNLSQKLLSQMNGHVRYAREHNKCYFL 1105

Query: 2668 IHIK 2679
            I ++
Sbjct: 1106 IDLE 1109


>ref|XP_007025187.1| Phytochrome E isoform 1 [Theobroma cacao] gi|508780553|gb|EOY27809.1|
            Phytochrome E isoform 1 [Theobroma cacao]
          Length = 1127

 Score = 1157 bits (2992), Expect = 0.0
 Identities = 581/907 (64%), Positives = 702/907 (77%), Gaps = 12/907 (1%)
 Frame = +1

Query: 4    SQRFAVQAISRLQSVPGGDIGVACDTLVEDVRVLTGYDRVMVYKFYEDE-HGEVISEIRR 180
            SQ+ AV+AI+RLQS+PGGDIGV CDT+VEDV+ LTGYDRVMVYKF++D+ HGEV+SEIRR
Sbjct: 212  SQKLAVRAIARLQSLPGGDIGVLCDTVVEDVQKLTGYDRVMVYKFHDDDDHGEVVSEIRR 271

Query: 181  SDLEPYLGLHYPATDIPQAARFLFQQNRVRMIYDCHSDPVPIIQSQELKQPLLLVNSTLR 360
            SDLEPYLGLHYPA DIPQAARFLF+QNRVRMI DCH++PV +IQS ELKQPL LVNSTLR
Sbjct: 272  SDLEPYLGLHYPAIDIPQAARFLFKQNRVRMICDCHANPVKVIQSDELKQPLCLVNSTLR 331

Query: 361  SPHACHTQYMANMGSIASLVMAILINENGSLKLWGLVACHHCSPRYVPFPLGYACEFLIQ 540
            SPH CH QYMANMGSIASLVMA++IN N S KLWGLV CHH SPRYVPFPL YACEFL+Q
Sbjct: 332  SPHGCHRQYMANMGSIASLVMAVIINGNDSTKLWGLVVCHHTSPRYVPFPLRYACEFLMQ 391

Query: 541  AFGLHLHRELILVSQLEEKKTLKTQTLLCDMLLRDVPFGIVTKSPNIMDLVKCDGAALYY 720
            AFGL L+ EL L SQL EKK L+TQTLLCDMLLRD PFGIVT+SPNIMDLVKCDGAALYY
Sbjct: 392  AFGLQLYLELQLASQLAEKKILRTQTLLCDMLLRDAPFGIVTQSPNIMDLVKCDGAALYY 451

Query: 721  DGKCQLLGVTPNEKQIQDIADWLLTYDSESTGFTTDSLVDAGYPGAELLLDVVCGMATVR 900
            +GKC LLGVTP E Q++DIA+WLL+   +STG +TDSL  AGYPGA LL D VCGMAT R
Sbjct: 452  NGKCWLLGVTPTESQVKDIAEWLLSTHEDSTGLSTDSLAGAGYPGAALLGDAVCGMATAR 511

Query: 901  INSTDFLFWFRSRTEKVVKWGGAKHHLEDKDNDGKMHPRSSFKAFLEEVKYRSLPWELLE 1080
            I S DFLFWFRS T K VKWGGAKHH EDKD+ G+MHPRSSF AFLE VK RSLPWE+ E
Sbjct: 512  ITSKDFLFWFRSHTAKEVKWGGAKHHPEDKDDGGRMHPRSSFNAFLEVVKSRSLPWEIPE 571

Query: 1081 MNAIHSLQLIMRG------QSGT-GMSIERQLMTER--VDELRSVASKMVNLIETAIVPV 1233
            +NAIHSLQLIMR        SG+ G+   RQ  TE   + EL SV  +MV LIETA  P+
Sbjct: 572  INAIHSLQLIMRDSFQGMEDSGSKGLVYARQNDTEMQGMGELSSVTYEMVRLIETATAPI 631

Query: 1234 IAVDSDGNVNGWNTKVAELTGLPDNGALGKSLINELVHEESRETVDNHLSRALQGEESKN 1413
              V++ G +NGWN K+AELTGL  + A+G+SL+NE+VHE+S E + N L RAL GEE KN
Sbjct: 632  FGVNTAGLINGWNAKIAELTGLQADDAMGRSLVNEVVHEDSHEVIANLLRRALHGEEDKN 691

Query: 1414 VQIKLRTFGSQQQNEAVYIVANACTTKNCTGNVIGVSFMGQDVTKEKALMDKFIRLQGDY 1593
            V++KLR FG  +QN  VYIV NACT+++ T +V+GV F+GQD+T EK +MDKFIRLQGDY
Sbjct: 692  VELKLRNFGLNRQNSVVYIVVNACTSRDYTNDVVGVCFVGQDITSEKVVMDKFIRLQGDY 751

Query: 1594 KAIIQSLDPLIPPIFASDENACCCEWNTAMEKLTGWTKGEAIGKILAGEIFGKLCQLKDQ 1773
            +AIIQSL PLIPPIFASDENACC EWN A+EKLTGW++ E IGK+L GEIFG+LCQLK Q
Sbjct: 752  RAIIQSLSPLIPPIFASDENACCSEWNAALEKLTGWSRSEVIGKMLPGEIFGELCQLKGQ 811

Query: 1774 GAITEFMILLYQAICSHVTLKFPFAFFDKRGKYCKFVLTANKRVDMEGNIIGCFCFLQMA 1953
              +T F ILLYQ I    T KFPF FFD++GK+ +  LTANKR D +GNIIGCFCFLQ+ 
Sbjct: 812  DTLTRFTILLYQGISGQDTEKFPFGFFDRKGKFLEVFLTANKRTDADGNIIGCFCFLQVI 871

Query: 1954 VPNLIQDVQ--NQQERKCLARLKELAYIQEETKAPLGGVRFAHRLLESSSLSDQMKRLLK 2127
            VP+L Q  +   Q++++   +LK+L Y+++E K PL G+RF H+LLE++++S+  K+ L+
Sbjct: 872  VPDLQQATEGHKQEDKEFFTKLKQLVYMRQEMKNPLNGIRFTHKLLETTAISENQKQFLE 931

Query: 2128 TSDACEKQMVKIIEDCSLESIEKRSMELHKDWFSLGIAMDAIISQVMILLTEKKLQLNYE 2307
            TSDACE+Q++ IIED  L SIE  SMEL  + F LG  +DA+ISQVMILL E+ LQL +E
Sbjct: 932  TSDACERQILAIIEDMDLGSIED-SMELSMEEFLLGNVLDAVISQVMILLGERNLQLFHE 990

Query: 2308 ISEKTKVLSIYGDQIRXXXXXXXXXXXXXXXXSSSPEGWVNIEVELNSVLYQDSGPVLQL 2487
            I E+ K  S+YGD+IR                + SP+GWV I +     L QD    ++L
Sbjct: 991  IPEEIKRQSLYGDRIR-LQLVLSDFLLSVVHHAPSPDGWVEIRISPGLKLIQDGNEFVRL 1049

Query: 2488 QFRLAHPGEGLPPELVQDMVSGGTLWSSPEGVGLSLSRKLLRMMNGQIRYIREPTKCFFL 2667
            QFR+ HPG+GLP  L+QD+   G   ++ EG+GL+LSRKLL  MNG + Y+RE +KC+FL
Sbjct: 1050 QFRMTHPGKGLPSTLIQDVFEEGNQPTTQEGLGLNLSRKLLNKMNGHVHYVREHSKCYFL 1109

Query: 2668 IHIKFPT 2688
            I ++  T
Sbjct: 1110 IDLEIRT 1116


>ref|XP_007214556.1| hypothetical protein PRUPE_ppa000491mg [Prunus persica]
            gi|462410421|gb|EMJ15755.1| hypothetical protein
            PRUPE_ppa000491mg [Prunus persica]
          Length = 1129

 Score = 1156 bits (2991), Expect = 0.0
 Identities = 576/912 (63%), Positives = 708/912 (77%), Gaps = 13/912 (1%)
 Frame = +1

Query: 1    QSQRFAVQAISRLQSVPGGDIGVACDTLVEDVRVLTGYDRVMVYKFYEDEHGEVISEIRR 180
            QSQ+ AV+AISRLQS+PGGDIGV CDT+VEDV+ LTGYDRVMVYKF+ED+HGEV+SEIRR
Sbjct: 210  QSQKLAVRAISRLQSLPGGDIGVLCDTVVEDVQKLTGYDRVMVYKFHEDDHGEVVSEIRR 269

Query: 181  SDLEPYLGLHYPATDIPQAARFLFQQNRVRMIYDCHSDPVPIIQSQELKQPLLLVNSTLR 360
            +DLE YLGLHYPATDIPQAARFLF+QNRVRMI DC+++PV IIQS+ELKQPL LVNSTLR
Sbjct: 270  ADLESYLGLHYPATDIPQAARFLFKQNRVRMICDCNANPVKIIQSEELKQPLCLVNSTLR 329

Query: 361  SPHACHTQYMANMGSIASLVMAILINENGSLKLWGLVACHHCSPRYVPFPLGYACEFLIQ 540
            SPH CH QYMANMGSIASLVMA++IN N S KLWGLV CHH SPRYVPFPL YACEFL+Q
Sbjct: 330  SPHGCHRQYMANMGSIASLVMAVIINGNDSTKLWGLVVCHHTSPRYVPFPLRYACEFLMQ 389

Query: 541  AFGLHLHRELILVSQLEEKKTLKTQTLLCDMLLRDVPFGIVTKSPNIMDLVKCDGAALYY 720
            AFGL L+ EL L +QL EKK L+TQTLLCDMLLRD P GIVT+SP+IMDLVKCDGAALYY
Sbjct: 390  AFGLQLYMELQLAAQLAEKKVLRTQTLLCDMLLRDAPSGIVTQSPSIMDLVKCDGAALYY 449

Query: 721  DGKCQLLGVTPNEKQIQDIADWLLTYDSESTGFTTDSLVDAGYPGAELLLDVVCGMATVR 900
             G C LLGVTP E Q++DIA+WLL+   +STG +TDSL +AGYPGA LL D VCGMAT R
Sbjct: 450  GGTCWLLGVTPTESQVKDIAEWLLSNHGDSTGLSTDSLAEAGYPGAPLLGDAVCGMATAR 509

Query: 901  INSTDFLFWFRSRTEKVVKWGGAKHHLEDKDNDGKMHPRSSFKAFLEEVKYRSLPWELLE 1080
             +S DFLFWFRS T + VKWGGAKHH E KD+ G+MHPRSSFKAFLE VK RSLPWE+ E
Sbjct: 510  ASSKDFLFWFRSHTAEEVKWGGAKHHPEAKDDGGRMHPRSSFKAFLEVVKSRSLPWEVSE 569

Query: 1081 MNAIHSLQLIMRG-----QSGTGMSI------ERQLMTERVDELRSVASKMVNLIETAIV 1227
            +NAIHSLQLIMR      +     +I      + ++  + +DEL SVA +MV LIETA V
Sbjct: 570  INAIHSLQLIMRDSFQDMEESVSKAINNAHQSDTEMQPQGIDELSSVACEMVKLIETASV 629

Query: 1228 PVIAVDSDGNVNGWNTKVAELTGLPDNGALGKSLINELVHEESRETVDNHLSRALQGEES 1407
            P+  VDS G +NGWNTK+AELTGL D+ A+GKSL NE+V E+SRE V++ L RALQGEE 
Sbjct: 630  PIFGVDSAGLINGWNTKMAELTGLQDSEAMGKSLANEIVCEDSREAVEDLLCRALQGEED 689

Query: 1408 KNVQIKLRTFGSQQQNEAVYIVANACTTKNCTGNVIGVSFMGQDVTKEKALMDKFIRLQG 1587
            KN+++KLR FG  Q N  VY+VAN CT++N   NV+GV F+GQD+T EK +MDKFIRLQG
Sbjct: 690  KNIELKLRNFGHSQHNSVVYVVANTCTSRNHAKNVVGVCFVGQDITCEKVVMDKFIRLQG 749

Query: 1588 DYKAIIQSLDPLIPPIFASDENACCCEWNTAMEKLTGWTKGEAIGKILAGEIFGKLCQLK 1767
            DYKAIIQSL+PLIPPIFASDENACC EWN AMEKLTGWT+ + IGK+L GEIFG  C+LK
Sbjct: 750  DYKAIIQSLNPLIPPIFASDENACCSEWNAAMEKLTGWTRDDVIGKMLPGEIFGGFCRLK 809

Query: 1768 DQGAITEFMILLYQAICSHVTLKFPFAFFDKRGKYCKFVLTANKRVDMEGNIIGCFCFLQ 1947
             Q  +T+FMI+LYQ I      KFP  FFD++G + + +LTA+KR D  GNIIGCFCFLQ
Sbjct: 810  GQDTLTKFMIILYQGISGQDIEKFPLGFFDRKGNFVEVILTASKRTDGGGNIIGCFCFLQ 869

Query: 1948 MAVPNLIQDVQ--NQQERKCLARLKELAYIQEETKAPLGGVRFAHRLLESSSLSDQMKRL 2121
            +++P+L Q ++   Q+ R+  ++LKEL Y+++E K PL G+RF HRLL+++++S+  K+ 
Sbjct: 870  ISLPDLQQPLEGHKQEGREGFSKLKELTYMRQEMKNPLNGIRFTHRLLQNTTISEYQKQF 929

Query: 2122 LKTSDACEKQMVKIIEDCSLESIEKRSMELHKDWFSLGIAMDAIISQVMILLTEKKLQLN 2301
            L TSDACE+Q++ IIED ++ SIE+  ++L+   F LG  +DAI+SQ MI L EK LQL 
Sbjct: 930  LDTSDACERQIMTIIEDMNMRSIEE-GVKLNMGEFVLGNILDAIVSQSMISLREKNLQLF 988

Query: 2302 YEISEKTKVLSIYGDQIRXXXXXXXXXXXXXXXXSSSPEGWVNIEVELNSVLYQDSGPVL 2481
            +EI E+ K LS++GDQIR                + SP+GWV I++     L QD    +
Sbjct: 989  HEIPEEVKSLSLHGDQIR-LQLVLSDFLLNVVNHAPSPDGWVEIKILPGLKLIQDGNNCI 1047

Query: 2482 QLQFRLAHPGEGLPPELVQDMVSGGTLWSSPEGVGLSLSRKLLRMMNGQIRYIREPTKCF 2661
            +LQFR+ HPG+GLP  L++DM  GG  W++ EG+GL+LSRKLL  MNGQ++Y+RE  KC+
Sbjct: 1048 RLQFRMTHPGQGLPAALIRDMFEGGNRWTTQEGLGLNLSRKLLNRMNGQVQYVREHDKCY 1107

Query: 2662 FLIHIKFPTTWE 2697
            FLI ++  T  E
Sbjct: 1108 FLIDLELKTRKE 1119


>ref|XP_008371559.1| PREDICTED: phytochrome E-like [Malus domestica]
          Length = 1130

 Score = 1155 bits (2987), Expect = 0.0
 Identities = 570/903 (63%), Positives = 705/903 (78%), Gaps = 10/903 (1%)
 Frame = +1

Query: 1    QSQRFAVQAISRLQSVPGGDIGVACDTLVEDVRVLTGYDRVMVYKFYEDEHGEVISEIRR 180
            QSQ+ AV+AISRLQS+PGGD+GV CDT+VEDVR LTGYDRVMVYKF++D+HGEV+SEIRR
Sbjct: 210  QSQKLAVRAISRLQSLPGGDLGVLCDTVVEDVRKLTGYDRVMVYKFHDDDHGEVVSEIRR 269

Query: 181  SDLEPYLGLHYPATDIPQAARFLFQQNRVRMIYDCHSDPVPIIQSQELKQPLLLVNSTLR 360
            SDLE YLGLHYPATDIPQAARFLF+QNRVRMI DC+++PV +IQS+ELKQPL LVNSTLR
Sbjct: 270  SDLESYLGLHYPATDIPQAARFLFKQNRVRMICDCYANPVKVIQSEELKQPLCLVNSTLR 329

Query: 361  SPHACHTQYMANMGSIASLVMAILINENGSLKLWGLVACHHCSPRYVPFPLGYACEFLIQ 540
            SPH CH QYMANMGSIASLVMA++IN N S KLWGLV CHH SPR+VPFPL YACEFL+Q
Sbjct: 330  SPHGCHRQYMANMGSIASLVMAVIINGNDSTKLWGLVVCHHTSPRHVPFPLRYACEFLMQ 389

Query: 541  AFGLHLHRELILVSQLEEKKTLKTQTLLCDMLLRDVPFGIVTKSPNIMDLVKCDGAALYY 720
            AFGL ++ EL L SQL EKK L+TQTLLCDMLLRD P GIVT+SP+IM+LVKCDGAALYY
Sbjct: 390  AFGLQIYMELQLASQLAEKKILRTQTLLCDMLLRDSPSGIVTQSPSIMNLVKCDGAALYY 449

Query: 721  DGKCQLLGVTPNEKQIQDIADWLLTYDSESTGFTTDSLVDAGYPGAELLLDVVCGMATVR 900
             G C L+GVTP E Q++DIA+WLL    +STG +TDSL +AGYPGA LL + VCGMAT R
Sbjct: 450  GGTCWLMGVTPTESQVKDIAEWLLNNHGDSTGLSTDSLAEAGYPGAPLLGNAVCGMATAR 509

Query: 901  INSTDFLFWFRSRTEKVVKWGGAKHHLEDKDNDGKMHPRSSFKAFLEEVKYRSLPWELLE 1080
            ++S DFLFWFRS T + VKWGGAKHH  DKD+  +MHPRSSFKAFLE VK RSLPWE+ E
Sbjct: 510  VSSKDFLFWFRSHTAEEVKWGGAKHHPGDKDDGERMHPRSSFKAFLEIVKTRSLPWEISE 569

Query: 1081 MNAIHSLQLIMRGQ--------SGTGMSIERQLMTERVDELRSVASKMVNLIETAIVPVI 1236
            +NAIHSLQLIMR          S      + ++  + +DEL SVA +MV LIETA VP+ 
Sbjct: 570  INAIHSLQLIMRDSFQDIEETGSXAVQQSDAEMQLQGMDELSSVACEMVKLIETASVPIF 629

Query: 1237 AVDSDGNVNGWNTKVAELTGLPDNGALGKSLINELVHEESRETVDNHLSRALQGEESKNV 1416
             VDSDG +NGWN K+AELTGL D+ A+GKSL+NE+V+E+SRE V+N L RALQGEE KNV
Sbjct: 630  GVDSDGLINGWNAKIAELTGLQDSEAMGKSLVNEIVYEDSREAVENLLRRALQGEEDKNV 689

Query: 1417 QIKLRTFGSQQQNEAVYIVANACTTKNCTGNVIGVSFMGQDVTKEKALMDKFIRLQGDYK 1596
            ++KLR FG  Q N  VYIVA+ CT+++   NV+G  F+GQD+T EK +M+KFIRLQGDYK
Sbjct: 690  ELKLRNFGLSQHNSVVYIVASTCTSRSPAKNVVGXCFVGQDITCEKVVMEKFIRLQGDYK 749

Query: 1597 AIIQSLDPLIPPIFASDENACCCEWNTAMEKLTGWTKGEAIGKILAGEIFGKLCQLKDQG 1776
            AIIQSL+PLIPPIFASDENACC EWN+AMEKLTGWT+   IGK L GEIFG LC+L+ Q 
Sbjct: 750  AIIQSLNPLIPPIFASDENACCSEWNSAMEKLTGWTRDNVIGKTLPGEIFGGLCRLRGQD 809

Query: 1777 AITEFMILLYQAICSHVTLKFPFAFFDKRGKYCKFVLTANKRVDMEGNIIGCFCFLQMAV 1956
             +T+FMI+LYQ I      KFPF FFD++GK+ + +LTANKR D  GNIIGCFCFLQ+ +
Sbjct: 810  ILTKFMIMLYQGISGKEIEKFPFGFFDRKGKFVEALLTANKRTDAGGNIIGCFCFLQIFL 869

Query: 1957 PNLIQDVQN--QQERKCLARLKELAYIQEETKAPLGGVRFAHRLLESSSLSDQMKRLLKT 2130
            P+L   ++   Q++ +C ++LKEL Y+++E K  L G++F HRLLES+++S+  K+ L T
Sbjct: 870  PDLQSALEGHIQEDGECFSKLKELXYMRQEMKNALXGIQFTHRLLESTTISEYQKQFLDT 929

Query: 2131 SDACEKQMVKIIEDCSLESIEKRSMELHKDWFSLGIAMDAIISQVMILLTEKKLQLNYEI 2310
            S+ACE+Q++ IIED  ++SI + S++L+ + F LG  +DAIISQ M+LL EK LQL +EI
Sbjct: 930  SNACERQIMTIIEDIDVKSIAEGSVKLNMEEFXLGSVVDAIISQSMLLLREKNLQLFHEI 989

Query: 2311 SEKTKVLSIYGDQIRXXXXXXXXXXXXXXXXSSSPEGWVNIEVELNSVLYQDSGPVLQLQ 2490
             E+ K LS++GDQIR                 SS  GWV I++     L QD    ++LQ
Sbjct: 990  PEEIKSLSLHGDQIRLQLVLSDFLLNVVNHTPSS-NGWVEIKISPGLKLIQDGNNYIRLQ 1048

Query: 2491 FRLAHPGEGLPPELVQDMVSGGTLWSSPEGVGLSLSRKLLRMMNGQIRYIREPTKCFFLI 2670
            FR+ HPG+GLP  LVQDM  GG  W++ EG+GL+LSRK+L  MNGQ++Y+RE  KC+FL+
Sbjct: 1049 FRMTHPGQGLPTTLVQDMFEGGNRWTTQEGLGLNLSRKILNRMNGQVQYVREHDKCYFLV 1108

Query: 2671 HIK 2679
            +I+
Sbjct: 1109 NIE 1111


>ref|XP_012091888.1| PREDICTED: phytochrome E isoform X3 [Jatropha curcas]
          Length = 1046

 Score = 1154 bits (2984), Expect = 0.0
 Identities = 577/905 (63%), Positives = 692/905 (76%), Gaps = 12/905 (1%)
 Frame = +1

Query: 1    QSQRFAVQAISRLQSVPGGDIGVACDTLVEDVRVLTGYDRVMVYKFYEDEHGEVISEIRR 180
            QSQ+ AV+AISRLQS+PGGD+GV CD++VEDV+ LTGYDRVMVYKF++D+HGEV+SEIRR
Sbjct: 126  QSQKLAVRAISRLQSLPGGDVGVLCDSVVEDVQKLTGYDRVMVYKFHDDDHGEVVSEIRR 185

Query: 181  SDLEPYLGLHYPATDIPQAARFLFQQNRVRMIYDCHSDPVPIIQSQELKQPLLLVNSTLR 360
            SDLEPYLGLHYPATDIPQAARFLF+QNRVRMI DCH++PV IIQS+ELK PL LVNSTLR
Sbjct: 186  SDLEPYLGLHYPATDIPQAARFLFKQNRVRMICDCHANPVRIIQSEELKHPLCLVNSTLR 245

Query: 361  SPHACHTQYMANMGSIASLVMAILINENGSLKLWGLVACHHCSPRYVPFPLGYACEFLIQ 540
            SPH CHTQYMANMGSIASLVMA++IN N S KLWGLV CHH SPR VPFPL YACEFL+Q
Sbjct: 246  SPHGCHTQYMANMGSIASLVMAVIINGNDSTKLWGLVVCHHTSPRTVPFPLRYACEFLMQ 305

Query: 541  AFGLHLHRELILVSQLEEKKTLKTQTLLCDMLLRDVPFGIVTKSPNIMDLVKCDGAALYY 720
            AFGL L+ EL L  +  EK+ L+TQTLLCDMLLRD PFGIVT+SP++MDLVKCDGAALYY
Sbjct: 306  AFGLQLYMELQLAERSAEKRILRTQTLLCDMLLRDAPFGIVTQSPSVMDLVKCDGAALYY 365

Query: 721  DGKCQLLGVTPNEKQIQDIADWLLTYDSESTGFTTDSLVDAGYPGAELLLDVVCGMATVR 900
             GKC LLG+TP E Q++DIA+WLL    +STG +TDSL DAGYPGA LL D VCGMAT R
Sbjct: 366  GGKCWLLGITPTESQVKDIAEWLLNNHGDSTGLSTDSLADAGYPGAALLGDAVCGMATAR 425

Query: 901  INSTDFLFWFRSRTEKVVKWGGAKHHLEDKDNDGKMHPRSSFKAFLEEVKYRSLPWELLE 1080
            I S DFLFWFRS + K VKWGGAKHH EDKD+  +MHPRSSF AFLE VK RSLPWE+ E
Sbjct: 426  ITSRDFLFWFRSHSAKEVKWGGAKHHPEDKDDGQRMHPRSSFNAFLEVVKSRSLPWEVSE 485

Query: 1081 MNAIHSLQLIMR---------GQSGTGMSIERQLMTERVDELRSVASKMVNLIETAIVPV 1233
            +NAIHSLQLIMR         G           +  + +DEL SVA +MV LIETA  P+
Sbjct: 486  INAIHSLQLIMRDSFQDMEDSGSKAIVYDRRTDIEMQGIDELSSVACEMVRLIETATAPI 545

Query: 1234 IAVDSDGNVNGWNTKVAELTGLPDNGALGKSLINELVHEESRETVDNHLSRALQGEESKN 1413
              VDS G +NGWN+KVAELTGL  + A+GKSL++E+VHE+SR  V++ L RALQGEE KN
Sbjct: 546  FGVDSAGLINGWNSKVAELTGLQTSAAMGKSLVHEIVHEDSRGVVESLLCRALQGEEDKN 605

Query: 1414 VQIKLRTFGSQQQNEAVYIVANACTTKNCTGNVIGVSFMGQDVTKEKALMDKFIRLQGDY 1593
            V++KLR FG  QQN A+Y+V NACT+++   NVIGV F+GQD+T EK  MDKF+RLQGDY
Sbjct: 606  VELKLRKFGLHQQNSAIYVVVNACTSRDYANNVIGVCFVGQDITPEKLFMDKFLRLQGDY 665

Query: 1594 KAIIQSLDPLIPPIFASDENACCCEWNTAMEKLTGWTKGEAIGKILAGEIFGKLCQLKDQ 1773
            K II+SL PLIPPIFASDENACCCEWN AMEKLTG T+ E IGK+L  EIFG LC+LKDQ
Sbjct: 666  KTIIESLSPLIPPIFASDENACCCEWNAAMEKLTGTTRQEVIGKMLPAEIFGGLCRLKDQ 725

Query: 1774 GAITEFMILLYQAICSHVTLKFPFAFFDKRGKYCKFVLTANKRVDMEGNIIGCFCFLQMA 1953
              +T+FMILLY+ I    T KFPF FF+ +GK+ +  LT NKR   +G+IIGCFCFLQ  
Sbjct: 726  DTLTKFMILLYRGISGQDTEKFPFGFFNGQGKFVEVFLTVNKRTGPDGSIIGCFCFLQTV 785

Query: 1954 VPN--LIQDVQNQQERKCLARLKELAYIQEETKAPLGGVRFAHRLLESSSLSDQMKRLLK 2127
             P+  L  D   Q+E+    +LKELAYIQ+E K PL G+RF H+LLE +S+S+  K+ L+
Sbjct: 786  EPDLQLALDGHTQEEQVSFLKLKELAYIQQEMKNPLSGIRFTHKLLEDTSISEHQKQFLE 845

Query: 2128 TSDACEKQMVKIIEDCSLESIEKRS-MELHKDWFSLGIAMDAIISQVMILLTEKKLQLNY 2304
            TSDACEKQ++ IIED  L  +EK S +EL  + F LG  +DAIISQVMILL E+ LQL +
Sbjct: 846  TSDACEKQIMAIIEDMDLARLEKGSNIELKMEEFLLGNVLDAIISQVMILLRERNLQLFH 905

Query: 2305 EISEKTKVLSIYGDQIRXXXXXXXXXXXXXXXXSSSPEGWVNIEVELNSVLYQDSGPVLQ 2484
            EI E+ K LS+YGDQIR                +  P+GWV I+V     L +D    ++
Sbjct: 906  EIPEEIKTLSLYGDQIR-LQLILSDILLSVVHHAPVPDGWVEIKVSPGLTLIKDGNEFMR 964

Query: 2485 LQFRLAHPGEGLPPELVQDMVSGGTLWSSPEGVGLSLSRKLLRMMNGQIRYIREPTKCFF 2664
            LQ R+ HPG+GLP  LV+DM +GG  +S+ EG+GL+LS+KLL  MNG +RY RE  KC+F
Sbjct: 965  LQIRMTHPGKGLPSALVEDMFAGGNQYSTQEGLGLNLSQKLLSQMNGHVRYAREHNKCYF 1024

Query: 2665 LIHIK 2679
            LI ++
Sbjct: 1025 LIDLE 1029


>ref|XP_012091885.1| PREDICTED: phytochrome E isoform X1 [Jatropha curcas]
            gi|802787275|ref|XP_012091886.1| PREDICTED: phytochrome E
            isoform X1 [Jatropha curcas]
          Length = 1127

 Score = 1154 bits (2984), Expect = 0.0
 Identities = 577/905 (63%), Positives = 692/905 (76%), Gaps = 12/905 (1%)
 Frame = +1

Query: 1    QSQRFAVQAISRLQSVPGGDIGVACDTLVEDVRVLTGYDRVMVYKFYEDEHGEVISEIRR 180
            QSQ+ AV+AISRLQS+PGGD+GV CD++VEDV+ LTGYDRVMVYKF++D+HGEV+SEIRR
Sbjct: 207  QSQKLAVRAISRLQSLPGGDVGVLCDSVVEDVQKLTGYDRVMVYKFHDDDHGEVVSEIRR 266

Query: 181  SDLEPYLGLHYPATDIPQAARFLFQQNRVRMIYDCHSDPVPIIQSQELKQPLLLVNSTLR 360
            SDLEPYLGLHYPATDIPQAARFLF+QNRVRMI DCH++PV IIQS+ELK PL LVNSTLR
Sbjct: 267  SDLEPYLGLHYPATDIPQAARFLFKQNRVRMICDCHANPVRIIQSEELKHPLCLVNSTLR 326

Query: 361  SPHACHTQYMANMGSIASLVMAILINENGSLKLWGLVACHHCSPRYVPFPLGYACEFLIQ 540
            SPH CHTQYMANMGSIASLVMA++IN N S KLWGLV CHH SPR VPFPL YACEFL+Q
Sbjct: 327  SPHGCHTQYMANMGSIASLVMAVIINGNDSTKLWGLVVCHHTSPRTVPFPLRYACEFLMQ 386

Query: 541  AFGLHLHRELILVSQLEEKKTLKTQTLLCDMLLRDVPFGIVTKSPNIMDLVKCDGAALYY 720
            AFGL L+ EL L  +  EK+ L+TQTLLCDMLLRD PFGIVT+SP++MDLVKCDGAALYY
Sbjct: 387  AFGLQLYMELQLAERSAEKRILRTQTLLCDMLLRDAPFGIVTQSPSVMDLVKCDGAALYY 446

Query: 721  DGKCQLLGVTPNEKQIQDIADWLLTYDSESTGFTTDSLVDAGYPGAELLLDVVCGMATVR 900
             GKC LLG+TP E Q++DIA+WLL    +STG +TDSL DAGYPGA LL D VCGMAT R
Sbjct: 447  GGKCWLLGITPTESQVKDIAEWLLNNHGDSTGLSTDSLADAGYPGAALLGDAVCGMATAR 506

Query: 901  INSTDFLFWFRSRTEKVVKWGGAKHHLEDKDNDGKMHPRSSFKAFLEEVKYRSLPWELLE 1080
            I S DFLFWFRS + K VKWGGAKHH EDKD+  +MHPRSSF AFLE VK RSLPWE+ E
Sbjct: 507  ITSRDFLFWFRSHSAKEVKWGGAKHHPEDKDDGQRMHPRSSFNAFLEVVKSRSLPWEVSE 566

Query: 1081 MNAIHSLQLIMR---------GQSGTGMSIERQLMTERVDELRSVASKMVNLIETAIVPV 1233
            +NAIHSLQLIMR         G           +  + +DEL SVA +MV LIETA  P+
Sbjct: 567  INAIHSLQLIMRDSFQDMEDSGSKAIVYDRRTDIEMQGIDELSSVACEMVRLIETATAPI 626

Query: 1234 IAVDSDGNVNGWNTKVAELTGLPDNGALGKSLINELVHEESRETVDNHLSRALQGEESKN 1413
              VDS G +NGWN+KVAELTGL  + A+GKSL++E+VHE+SR  V++ L RALQGEE KN
Sbjct: 627  FGVDSAGLINGWNSKVAELTGLQTSAAMGKSLVHEIVHEDSRGVVESLLCRALQGEEDKN 686

Query: 1414 VQIKLRTFGSQQQNEAVYIVANACTTKNCTGNVIGVSFMGQDVTKEKALMDKFIRLQGDY 1593
            V++KLR FG  QQN A+Y+V NACT+++   NVIGV F+GQD+T EK  MDKF+RLQGDY
Sbjct: 687  VELKLRKFGLHQQNSAIYVVVNACTSRDYANNVIGVCFVGQDITPEKLFMDKFLRLQGDY 746

Query: 1594 KAIIQSLDPLIPPIFASDENACCCEWNTAMEKLTGWTKGEAIGKILAGEIFGKLCQLKDQ 1773
            K II+SL PLIPPIFASDENACCCEWN AMEKLTG T+ E IGK+L  EIFG LC+LKDQ
Sbjct: 747  KTIIESLSPLIPPIFASDENACCCEWNAAMEKLTGTTRQEVIGKMLPAEIFGGLCRLKDQ 806

Query: 1774 GAITEFMILLYQAICSHVTLKFPFAFFDKRGKYCKFVLTANKRVDMEGNIIGCFCFLQMA 1953
              +T+FMILLY+ I    T KFPF FF+ +GK+ +  LT NKR   +G+IIGCFCFLQ  
Sbjct: 807  DTLTKFMILLYRGISGQDTEKFPFGFFNGQGKFVEVFLTVNKRTGPDGSIIGCFCFLQTV 866

Query: 1954 VPN--LIQDVQNQQERKCLARLKELAYIQEETKAPLGGVRFAHRLLESSSLSDQMKRLLK 2127
             P+  L  D   Q+E+    +LKELAYIQ+E K PL G+RF H+LLE +S+S+  K+ L+
Sbjct: 867  EPDLQLALDGHTQEEQVSFLKLKELAYIQQEMKNPLSGIRFTHKLLEDTSISEHQKQFLE 926

Query: 2128 TSDACEKQMVKIIEDCSLESIEKRS-MELHKDWFSLGIAMDAIISQVMILLTEKKLQLNY 2304
            TSDACEKQ++ IIED  L  +EK S +EL  + F LG  +DAIISQVMILL E+ LQL +
Sbjct: 927  TSDACEKQIMAIIEDMDLARLEKGSNIELKMEEFLLGNVLDAIISQVMILLRERNLQLFH 986

Query: 2305 EISEKTKVLSIYGDQIRXXXXXXXXXXXXXXXXSSSPEGWVNIEVELNSVLYQDSGPVLQ 2484
            EI E+ K LS+YGDQIR                +  P+GWV I+V     L +D    ++
Sbjct: 987  EIPEEIKTLSLYGDQIR-LQLILSDILLSVVHHAPVPDGWVEIKVSPGLTLIKDGNEFMR 1045

Query: 2485 LQFRLAHPGEGLPPELVQDMVSGGTLWSSPEGVGLSLSRKLLRMMNGQIRYIREPTKCFF 2664
            LQ R+ HPG+GLP  LV+DM +GG  +S+ EG+GL+LS+KLL  MNG +RY RE  KC+F
Sbjct: 1046 LQIRMTHPGKGLPSALVEDMFAGGNQYSTQEGLGLNLSQKLLSQMNGHVRYAREHNKCYF 1105

Query: 2665 LIHIK 2679
            LI ++
Sbjct: 1106 LIDLE 1110


>ref|XP_009352111.1| PREDICTED: phytochrome E-like [Pyrus x bretschneideri]
          Length = 1130

 Score = 1153 bits (2982), Expect = 0.0
 Identities = 568/903 (62%), Positives = 704/903 (77%), Gaps = 10/903 (1%)
 Frame = +1

Query: 1    QSQRFAVQAISRLQSVPGGDIGVACDTLVEDVRVLTGYDRVMVYKFYEDEHGEVISEIRR 180
            QSQ+ AV+AISRLQS+PGGDIGV CDT+VEDVR LTGYDRVMVYKF++D+HGEV+SEIRR
Sbjct: 210  QSQKLAVRAISRLQSLPGGDIGVLCDTVVEDVRKLTGYDRVMVYKFHDDDHGEVVSEIRR 269

Query: 181  SDLEPYLGLHYPATDIPQAARFLFQQNRVRMIYDCHSDPVPIIQSQELKQPLLLVNSTLR 360
            SDLE YLGLHYPATDIPQAARFLF+QNRVRMI DC+++PV +I+S+ELKQPL LVNSTLR
Sbjct: 270  SDLESYLGLHYPATDIPQAARFLFKQNRVRMICDCNANPVKVIESEELKQPLCLVNSTLR 329

Query: 361  SPHACHTQYMANMGSIASLVMAILINENGSLKLWGLVACHHCSPRYVPFPLGYACEFLIQ 540
            SPH CH QYMANMGSIASLVMA++IN N S KLWGLV CHH SPRYVPFPL YACEFL+Q
Sbjct: 330  SPHGCHRQYMANMGSIASLVMAVIINGNDSTKLWGLVVCHHASPRYVPFPLRYACEFLMQ 389

Query: 541  AFGLHLHRELILVSQLEEKKTLKTQTLLCDMLLRDVPFGIVTKSPNIMDLVKCDGAALYY 720
            AFG+ ++ EL L SQL EKK L+TQTLLCDMLLRD P GIVT+SP+IM+LVKCDGAALYY
Sbjct: 390  AFGVQIYMELQLASQLAEKKILRTQTLLCDMLLRDSPSGIVTQSPSIMNLVKCDGAALYY 449

Query: 721  DGKCQLLGVTPNEKQIQDIADWLLTYDSESTGFTTDSLVDAGYPGAELLLDVVCGMATVR 900
             G C L+GVTP E Q++DIA+WLL    +STG +TDSL +AGYPGA LL + VCGMAT R
Sbjct: 450  GGTCWLMGVTPTESQVKDIAEWLLNNHGDSTGLSTDSLAEAGYPGAPLLGNAVCGMATAR 509

Query: 901  INSTDFLFWFRSRTEKVVKWGGAKHHLEDKDNDGKMHPRSSFKAFLEEVKYRSLPWELLE 1080
            ++S DFLFWFRS T + VKWGGAKHH  DKD+  +MHPRSSFKAFLE VK RSLPWE+ E
Sbjct: 510  VSSKDFLFWFRSHTAEEVKWGGAKHHPGDKDDGERMHPRSSFKAFLEIVKTRSLPWEISE 569

Query: 1081 MNAIHSLQLIMRGQ--------SGTGMSIERQLMTERVDELRSVASKMVNLIETAIVPVI 1236
            +NAIHSLQLIMR          S      + ++  + +DEL SVA +MV LIETA VP+ 
Sbjct: 570  INAIHSLQLIMRDSFQDIEETGSKAVQQSDAEMQLQGIDELSSVAFEMVKLIETASVPIF 629

Query: 1237 AVDSDGNVNGWNTKVAELTGLPDNGALGKSLINELVHEESRETVDNHLSRALQGEESKNV 1416
             VDSDG +NGWN K+AELTGL D+ A+GKSL+NE+V+E+SRE V+N L RALQGEE KNV
Sbjct: 630  GVDSDGLINGWNAKIAELTGLQDSEAMGKSLVNEIVYEDSREAVENLLRRALQGEEDKNV 689

Query: 1417 QIKLRTFGSQQQNEAVYIVANACTTKNCTGNVIGVSFMGQDVTKEKALMDKFIRLQGDYK 1596
            ++KLR FG  Q N  VYIVA+ CT+++   NV+GV F+GQD+T EK +M+KFIRLQGDYK
Sbjct: 690  ELKLRNFGLSQHNSVVYIVASTCTSRSPAKNVVGVCFVGQDITCEKVVMEKFIRLQGDYK 749

Query: 1597 AIIQSLDPLIPPIFASDENACCCEWNTAMEKLTGWTKGEAIGKILAGEIFGKLCQLKDQG 1776
            AIIQSL+PLIPPIFASDENACC EWN+AMEK TGWT+   IGK L GEIFG LC+L+ Q 
Sbjct: 750  AIIQSLNPLIPPIFASDENACCSEWNSAMEKFTGWTRDNVIGKTLPGEIFGGLCRLRGQD 809

Query: 1777 AITEFMILLYQAICSHVTLKFPFAFFDKRGKYCKFVLTANKRVDMEGNIIGCFCFLQMAV 1956
             +T+FMI+LYQ I      KFPF FFD++GK+ + +LTANKR D  GNIIGCFCFLQ+ +
Sbjct: 810  ILTKFMIMLYQGISGKEIEKFPFGFFDRKGKFVEALLTANKRTDAGGNIIGCFCFLQIFL 869

Query: 1957 PNLIQDVQN--QQERKCLARLKELAYIQEETKAPLGGVRFAHRLLESSSLSDQMKRLLKT 2130
            P+L   ++   Q++ +C ++LKEL Y+++E K  L G++FAHRLLES+++S+  K+ L T
Sbjct: 870  PDLQSALEGRIQEDGECFSKLKELTYMRQEMKNALNGIQFAHRLLESTTISEYQKQFLDT 929

Query: 2131 SDACEKQMVKIIEDCSLESIEKRSMELHKDWFSLGIAMDAIISQVMILLTEKKLQLNYEI 2310
            S+ACE+Q++ II+D  ++SI + S++L+ + F LG  +D IISQ M+ L EK LQL +EI
Sbjct: 930  SNACERQIMTIIDDIDVKSIAEGSVKLNMEEFMLGSVVDVIISQSMLSLREKNLQLFHEI 989

Query: 2311 SEKTKVLSIYGDQIRXXXXXXXXXXXXXXXXSSSPEGWVNIEVELNSVLYQDSGPVLQLQ 2490
             E+ K LS++GDQIR                 SS  GWV I++     L QD    ++LQ
Sbjct: 990  PEEIKSLSLHGDQIRLQLVLSDFLLNVVNHAPSS-NGWVEIKISPGLKLIQDGNNYIRLQ 1048

Query: 2491 FRLAHPGEGLPPELVQDMVSGGTLWSSPEGVGLSLSRKLLRMMNGQIRYIREPTKCFFLI 2670
            FR+ HPG+GLP  LVQDM  GG  W++ EG+GL+LSRK+L  MNGQ++Y+RE  KC+FL+
Sbjct: 1049 FRMTHPGQGLPTALVQDMFEGGNRWTTQEGLGLNLSRKILNRMNGQVQYVREHDKCYFLV 1108

Query: 2671 HIK 2679
            +I+
Sbjct: 1109 NIE 1111


>ref|XP_008225375.1| PREDICTED: phytochrome E isoform X2 [Prunus mume]
          Length = 1135

 Score = 1152 bits (2981), Expect = 0.0
 Identities = 572/912 (62%), Positives = 701/912 (76%), Gaps = 13/912 (1%)
 Frame = +1

Query: 1    QSQRFAVQAISRLQSVPGGDIGVACDTLVEDVRVLTGYDRVMVYKFYEDEHGEVISEIRR 180
            QSQ+ AV+AISRLQS+PGGDIGV CDT+VEDV+ LTGYDRVMVYKF+ED+HGEV+SEIRR
Sbjct: 210  QSQKLAVRAISRLQSLPGGDIGVLCDTVVEDVQKLTGYDRVMVYKFHEDDHGEVVSEIRR 269

Query: 181  SDLEPYLGLHYPATDIPQAARFLFQQNRVRMIYDCHSDPVPIIQSQELKQPLLLVNSTLR 360
            +DLE YLGLHYPATDIPQAARFLF+QNRVRMI DC+++PV IIQS+ELKQPL LVNSTLR
Sbjct: 270  ADLESYLGLHYPATDIPQAARFLFKQNRVRMICDCNANPVKIIQSEELKQPLCLVNSTLR 329

Query: 361  SPHACHTQYMANMGSIASLVMAILINENGSLKLWGLVACHHCSPRYVPFPLGYACEFLIQ 540
            SPH CH QYMANMGSIASLVMA++IN N   KLWGLV CHH SPRYVPFPL YACEFL+Q
Sbjct: 330  SPHGCHRQYMANMGSIASLVMAVIINGNDLTKLWGLVVCHHTSPRYVPFPLRYACEFLMQ 389

Query: 541  AFGLHLHRELILVSQLEEKKTLKTQTLLCDMLLRDVPFGIVTKSPNIMDLVKCDGAALYY 720
            AFGL L+ EL L +QL EKK L+TQTLLCDMLLRD P GIVT+SP+IMDLVKCDGAALYY
Sbjct: 390  AFGLQLYMELQLAAQLAEKKVLRTQTLLCDMLLRDAPSGIVTQSPSIMDLVKCDGAALYY 449

Query: 721  DGKCQLLGVTPNEKQIQDIADWLLTYDSESTGFTTDSLVDAGYPGAELLLDVVCGMATVR 900
             G C LLGVTP E Q++DIADWLL+   +STG +TDSL +AGYPGA LL D VCGMAT R
Sbjct: 450  GGTCWLLGVTPTESQVKDIADWLLSNHGDSTGLSTDSLAEAGYPGAPLLGDAVCGMATAR 509

Query: 901  INSTDFLFWFRSRTEKVVKWGGAKHHLEDKDNDGKMHPRSSFKAFLEEVKYRSLPWELLE 1080
             +S DFLFWFRS T + VKWGGAKHH EDKD+ G+MHPRSSFKAFLE VK RSLPWE+ E
Sbjct: 510  ASSKDFLFWFRSHTAEEVKWGGAKHHPEDKDDGGRMHPRSSFKAFLEVVKSRSLPWEVSE 569

Query: 1081 MNAIHSLQLIMRGQ-----------SGTGMSIERQLMTERVDELRSVASKMVNLIETAIV 1227
            +NAIHSLQLIMR                    + ++  + +DEL SVA +M  LIETA V
Sbjct: 570  INAIHSLQLIMRDSFQDMEESVSKAVNNAHQSDTEMQPQGIDELSSVACEMAKLIETASV 629

Query: 1228 PVIAVDSDGNVNGWNTKVAELTGLPDNGALGKSLINELVHEESRETVDNHLSRALQGEES 1407
            P+  VDS G +NGWNTK+AELTGL D+ A+GKSL NE+V E+SR  V++ L RALQGEE 
Sbjct: 630  PIFGVDSAGLINGWNTKMAELTGLQDSEAMGKSLANEIVCEDSRGAVEDLLCRALQGEED 689

Query: 1408 KNVQIKLRTFGSQQQNEAVYIVANACTTKNCTGNVIGVSFMGQDVTKEKALMDKFIRLQG 1587
            KN+++KLR FG  Q N  VY+VAN CT++N   NV+GV F+GQD+T EK +MDKFIRLQG
Sbjct: 690  KNIELKLRNFGLSQHNSVVYVVANTCTSRNHAKNVVGVCFVGQDITCEKVVMDKFIRLQG 749

Query: 1588 DYKAIIQSLDPLIPPIFASDENACCCEWNTAMEKLTGWTKGEAIGKILAGEIFGKLCQLK 1767
            DYKAIIQSL+PLIPPIFASDENACC EWN AMEKLTGWT+ + IGK+L GEIFG  C+LK
Sbjct: 750  DYKAIIQSLNPLIPPIFASDENACCSEWNAAMEKLTGWTRDDVIGKMLPGEIFGGFCRLK 809

Query: 1768 DQGAITEFMILLYQAICSHVTLKFPFAFFDKRGKYCKFVLTANKRVDMEGNIIGCFCFLQ 1947
             Q  +T+FMI+LYQ I      KFP  FFD++G + + +LTA+KR D  GNIIGCFCFLQ
Sbjct: 810  GQDTLTKFMIVLYQGISGQDIEKFPLGFFDRKGNFVEVILTASKRTDAGGNIIGCFCFLQ 869

Query: 1948 MAVPNLIQDVQ--NQQERKCLARLKELAYIQEETKAPLGGVRFAHRLLESSSLSDQMKRL 2121
            + +P+L Q ++   Q+ R+  ++LKEL Y+++E + PL G+RF HRLL+++++S+  K+ 
Sbjct: 870  IFLPDLQQPLEGHKQEGREGFSKLKELTYMRQEMRNPLNGIRFTHRLLQNTTISEYQKQF 929

Query: 2122 LKTSDACEKQMVKIIEDCSLESIEKRSMELHKDWFSLGIAMDAIISQVMILLTEKKLQLN 2301
            L TSDACE+Q++ +IED ++ SIE+ S++L+   F LG  +DAI+SQ MI L  K LQL 
Sbjct: 930  LDTSDACERQIMTVIEDMNMRSIEEGSVKLNMGEFVLGNILDAIVSQSMISLRAKNLQLF 989

Query: 2302 YEISEKTKVLSIYGDQIRXXXXXXXXXXXXXXXXSSSPEGWVNIEVELNSVLYQDSGPVL 2481
            +EI E+ K LS++GDQIR                + SP+GWV I++     L QD    +
Sbjct: 990  HEIPEEVKSLSLHGDQIR-LQLVLSDFLLNVVNHAPSPDGWVEIKILPGLKLIQDGNNCI 1048

Query: 2482 QLQFRLAHPGEGLPPELVQDMVSGGTLWSSPEGVGLSLSRKLLRMMNGQIRYIREPTKCF 2661
            +LQFR+ HPG+GLP  L+QDM  GG  W++ EG+ L+LSRKLL  MNGQ++Y+RE  KC+
Sbjct: 1049 RLQFRMTHPGQGLPAALIQDMFEGGNRWTTQEGLCLNLSRKLLNRMNGQVQYVREHDKCY 1108

Query: 2662 FLIHIKFPTTWE 2697
            FLI ++  T  E
Sbjct: 1109 FLIDLELKTRKE 1120


>ref|XP_010100997.1| Phytochrome E [Morus notabilis] gi|587898137|gb|EXB86588.1|
            Phytochrome E [Morus notabilis]
          Length = 1123

 Score = 1151 bits (2977), Expect = 0.0
 Identities = 572/907 (63%), Positives = 698/907 (76%), Gaps = 13/907 (1%)
 Frame = +1

Query: 1    QSQRFAVQAISRLQSVPGGDIGVACDTLVEDVRVLTGYDRVMVYKFYEDEHGEVISEIRR 180
            QSQ+ AV+AISRLQS+PGGDIGV CDT+VEDV+ LTGYDRVMVYKF++D+HGEV+SEIRR
Sbjct: 202  QSQKLAVRAISRLQSLPGGDIGVLCDTVVEDVQKLTGYDRVMVYKFHDDDHGEVVSEIRR 261

Query: 181  SDLEPYLGLHYPATDIPQAARFLFQQNRVRMIYDCHSDPVPIIQSQELKQPLLLVNSTLR 360
            SDLEPYLGLHYPATDIPQAARFLF+QNRVR+I DC++ PV ++QS ELKQPL LVNSTLR
Sbjct: 262  SDLEPYLGLHYPATDIPQAARFLFKQNRVRIICDCNATPVRVVQSDELKQPLCLVNSTLR 321

Query: 361  SPHACHTQYMANMGSIASLVMAILINENGSLKLWGLVACHHCSPRYVPFPLGYACEFLIQ 540
            SPH CHTQYMANMGSIASLVMA++IN N S+KLWGLV CHH SPRYVPF L YACEFL+Q
Sbjct: 322  SPHGCHTQYMANMGSIASLVMAVVINSNDSMKLWGLVVCHHTSPRYVPFTLRYACEFLMQ 381

Query: 541  AFGLHLHRELILVSQLEEKKTLKTQTLLCDMLLRDVPFGIVTKSPNIMDLVKCDGAALYY 720
            AFGL LH EL L SQL EK+ L+TQTLLCDMLLRD PFGIVT+SP+I DLVKCDGAALYY
Sbjct: 382  AFGLQLHMELQLASQLAEKRILRTQTLLCDMLLRDAPFGIVTQSPSIKDLVKCDGAALYY 441

Query: 721  DGKCQLLGVTPNEKQIQDIADWLLTYDSESTGFTTDSLVDAGYPGAELLLDVVCGMATVR 900
             G C LLGVTP E Q++DIA+WLL    +STG +TDSL DAGYPGA LL D VCGMAT R
Sbjct: 442  GGSCWLLGVTPTESQVKDIAEWLLKNHGDSTGLSTDSLADAGYPGAALLGDAVCGMATAR 501

Query: 901  INSTDFLFWFRSRTEKVVKWGGAKHHLEDKDNDGKMHPRSSFKAFLEEVKYRSLPWELLE 1080
            I S DFLFWFRS T + VKWGGAKHH EDKD+ G+MHPRSSFKAFLE VK RSLPWE+ E
Sbjct: 502  ITSKDFLFWFRSHTAEEVKWGGAKHHPEDKDDGGRMHPRSSFKAFLEVVKSRSLPWEVSE 561

Query: 1081 MNAIHSLQLIMRGQ------------SGTGMSIERQLMTERVDELRSVASKMVNLIETAI 1224
            +NAIHSLQ+IMR              S    S + Q+    +DEL SVA +MV LIETA 
Sbjct: 562  INAIHSLQIIMRDSFQDMESRSLKTLSSAQQSDDTQM--HEMDELSSVACEMVKLIETAT 619

Query: 1225 VPVIAVDSDGNVNGWNTKVAELTGLPDNGALGKSLINELVHEESRETVDNHLSRALQGEE 1404
            VP+  VDS G +NGWN K+AELTGL  +  +GKSL+NE++HE+SRE V N LSRALQGEE
Sbjct: 620  VPIFGVDSAGVINGWNEKIAELTGLQVDNVMGKSLVNEVIHEDSREAVGNLLSRALQGEE 679

Query: 1405 SKNVQIKLRTFGSQQQNEAVYIVANACTTKNCTGNVIGVSFMGQDVTKEKALMDKFIRLQ 1584
             KN+++KLR FG+ ++   VYIVAN CT+++   N++GV F+GQD+T EK +MDKFIRLQ
Sbjct: 680  EKNIELKLRYFGTSKEKNVVYIVANTCTSRDYANNIVGVCFVGQDITNEKIVMDKFIRLQ 739

Query: 1585 GDYKAIIQSLDPLIPPIFASDENACCCEWNTAMEKLTGWTKGEAIGKILAGEIFGKLCQL 1764
            GDYKAIIQSL+PLIPPIFASDENACC EWN AMEKLTGW + E IGK+L GEIFG  C+L
Sbjct: 740  GDYKAIIQSLNPLIPPIFASDENACCSEWNAAMEKLTGWKRDEVIGKVLTGEIFGNFCRL 799

Query: 1765 KDQGAITEFMILLYQAICSHVTLKFPFAFFDKRGKYCKFVLTANKRVDMEGNIIGCFCFL 1944
            K   ++T+FMI+LY+ I      KFP  FF+K+GK+ + +LTANKR D +GN  GCFCFL
Sbjct: 800  KGHDSLTKFMIILYRGISGQDIKKFPLEFFNKKGKFVEVLLTANKRTDADGNAAGCFCFL 859

Query: 1945 QMAVPNLIQDVQ-NQQERKCLARLKELAYIQEETKAPLGGVRFAHRLLESSSLSDQMKRL 2121
            Q+ VP++ Q ++  +++ +  ++ KELAYI+++ K PL G+RF H+LLES+++S+  K+ 
Sbjct: 860  QIVVPDVQQALEVCRKDDEGFSKFKELAYIRQQMKNPLNGIRFTHKLLESTAISENQKQF 919

Query: 2122 LKTSDACEKQMVKIIEDCSLESIEKRSMELHKDWFSLGIAMDAIISQVMILLTEKKLQLN 2301
            L  SDACE+Q++ IIED  L +IE+ S+EL  + F L   +DAI+SQ MILL EK LQL 
Sbjct: 920  LDASDACERQIMMIIED-DLGNIEEGSLELKMEEFRLRNVLDAIVSQAMILLREKNLQLF 978

Query: 2302 YEISEKTKVLSIYGDQIRXXXXXXXXXXXXXXXXSSSPEGWVNIEVELNSVLYQDSGPVL 2481
            +EI E  K L +YGD IR                 +S +GWV +E+     L QD    +
Sbjct: 979  HEIPEDIKSLYLYGDHIRLQLVLSDFLLNVVHHAPAS-DGWVELEISPGLKLIQDDNEFI 1037

Query: 2482 QLQFRLAHPGEGLPPELVQDMVSGGTLWSSPEGVGLSLSRKLLRMMNGQIRYIREPTKCF 2661
            +LQFR++HPGEGLP  LVQDM  GG   ++ EG+GL+LSRKLL  MNGQ++Y+RE ++C+
Sbjct: 1038 RLQFRISHPGEGLPAALVQDMFEGGKQLTTQEGLGLNLSRKLLSRMNGQVKYVREHSRCY 1097

Query: 2662 FLIHIKF 2682
            FLI I F
Sbjct: 1098 FLIDIGF 1104


>gb|AKN34495.1| phytochrome, partial [Capnoides sempervirens]
          Length = 895

 Score = 1149 bits (2972), Expect = 0.0
 Identities = 570/894 (63%), Positives = 698/894 (78%), Gaps = 12/894 (1%)
 Frame = +1

Query: 67   VACDTLVEDVRVLTGYDRVMVYKFYEDEHGEVISEIRRSDLEPYLGLHYPATDIPQAARF 246
            V CDT+VE+V+ LTGYDRVMVYKF+EDEHGEV+SEIRRSDLEPYLGLHYPATDIPQAARF
Sbjct: 1    VLCDTVVENVQELTGYDRVMVYKFHEDEHGEVVSEIRRSDLEPYLGLHYPATDIPQAARF 60

Query: 247  LFQQNRVRMIYDCHSDPVPIIQSQELKQPLLLVNSTLRSPHACHTQYMANMGSIASLVMA 426
            LF+QNR+RMI DCH++PV IIQS+ELKQPL LVNSTLRSPH CH    ANMGS+ASLVMA
Sbjct: 61   LFKQNRIRMICDCHANPVGIIQSEELKQPLCLVNSTLRSPHGCHXXXXANMGSLASLVMA 120

Query: 427  ILINENGSLKLWGLVACHHCSPRYVPFPLGYACEFLIQAFGLHLHRELILVSQLEEKKTL 606
            +++N N + +LWGLV CHH S RYVPFPL YACEFL+QAFGL L+ EL + +QL EKK L
Sbjct: 121  VVVNGNNATRLWGLVVCHHSSRRYVPFPLRYACEFLMQAFGLQLNMELQIAAQLAEKKIL 180

Query: 607  KTQTLLCDMLLRDVPFGIVTKSPNIMDLVKCDGAALYYDGKCQLLGVTPNEKQIQDIADW 786
            K QTLLCDMLLRD+P GIVT+SPNIMDLVKCDGAA+Y+ G C LLGVTP ++QI+DIADW
Sbjct: 181  KMQTLLCDMLLRDIPDGIVTQSPNIMDLVKCDGAAMYFGGMCWLLGVTPTKEQIKDIADW 240

Query: 787  LLTYDSESTGFTTDSLVDAGYPGAELLLDVVCGMATVRINSTDFLFWFRSRTEKVVKWGG 966
            LLTY ++STG +TDSL DAGYPGA LL   VCGMA+ RI S DFLFWFRS T K VKWGG
Sbjct: 241  LLTYHADSTGLSTDSLADAGYPGAALLGGEVCGMASARITSKDFLFWFRSHTAKEVKWGG 300

Query: 967  AKHHLEDKDNDGKMHPRSSFKAFLEEVKYRSLPWELLEMNAIHSLQLIMRG------QSG 1128
            AKHH EDKD+ G+MHPRSSFKAFLE VK RS PWE+ EMN IHSLQLIMRG        G
Sbjct: 301  AKHHPEDKDDGGRMHPRSSFKAFLEVVKRRSFPWEISEMNGIHSLQLIMRGSFQDTEDLG 360

Query: 1129 TGMSIERQ---LMTERVDELRSVASKMVNLIETAIVPVIAVDSDGNVNGWNTKVAELTGL 1299
                +  Q   L  + +DEL SVA +MV LIETA  P++AVDS G +NGWN K AELTGL
Sbjct: 361  AKSVVHAQPNDLEIQGMDELSSVACEMVRLIETATAPILAVDSAGLINGWNAKAAELTGL 420

Query: 1300 PDNGALGKSLINELVHEESRETVDNHLSRALQGEESKNVQIKLRTFGSQQQNEAVYIVAN 1479
                A+GKSL+N+LV++ESR  V+NH+SRALQGEE KNV++KLRTFG +Q NE V+I+AN
Sbjct: 421  AAIDAMGKSLVNDLVYQESRNVVENHISRALQGEEDKNVELKLRTFGVKQHNEPVFILAN 480

Query: 1480 ACTTKNCTGNVIGVSFMGQDVTKEKALMDKFIRLQGDYKAIIQSLDPLIPPIFASDENAC 1659
            AC++K+    ++GV F+GQDVT+EK +MDKF+RLQ DYKAIIQSL+ LIPPIFASD+NAC
Sbjct: 481  ACSSKDYRNGIVGVCFVGQDVTEEKIIMDKFVRLQVDYKAIIQSLNSLIPPIFASDDNAC 540

Query: 1660 CCEWNTAMEKLTGWTKGEAIGKILAGEIFGKLCQLKDQGAITEFMILLYQAICSHVTLKF 1839
            CCEWN AMEKLTGWT+ E IGK+L GEIFG LC+LK Q A+T+FMIL+Y+AI    T K 
Sbjct: 541  CCEWNAAMEKLTGWTREEIIGKMLLGEIFGGLCRLKSQDALTKFMILIYRAIAGQETEKL 600

Query: 1840 PFAFFDKRGKYCKFVLTANKRVDMEGNIIGCFCFLQMAVPNLIQ--DVQNQQERKCLARL 2013
            PFAFF++ GKY + +LTANKR DM G  IGCFCFLQ  VP+  +   VQ QQE KC ARL
Sbjct: 601  PFAFFNREGKYLEVLLTANKRTDMSGKTIGCFCFLQEPVPDRDEALQVQRQQENKCFARL 660

Query: 2014 KELAYIQEETKAPLGGVRFAHRLLESSSLSDQMKRLLKTSDACEKQMVKIIEDCSLESIE 2193
            +EL YI +E K PL G+RF H+LLE++++SD+ K+ L+TS+ACE+Q++ II+D    SIE
Sbjct: 661  EELMYIGQEMKNPLNGIRFTHKLLETTAVSDEQKQFLETSEACERQLMTIIDDMEFGSIE 720

Query: 2194 KRSMELHKDWFSLGIAMDAIISQVMILLTEKKLQLNYEISEKTKVLSIYGDQIRXXXXXX 2373
            +  M+L+K  F LG  MDAI+SQVMILL EK+LQL ++I E+ K LS+YGDQIR      
Sbjct: 721  ESWMKLNKAAFLLGSVMDAIVSQVMILLREKRLQLIHDIPEQIKTLSLYGDQIR-LQQVL 779

Query: 2374 XXXXXXXXXXSSSPEGWVNIEVELNSVLYQDSGPVLQLQFRLAHPGEGLPPELVQDMVSG 2553
                      + +P GWV I+V  NS L +D   ++ L+FR++HPGEG+  E++QDM   
Sbjct: 780  SVFLQNVVHHAPTPGGWVEIKVTFNSKLNEDGIQLVHLEFRMSHPGEGVSSEVIQDMFEE 839

Query: 2554 GTLWSSPEGVGLSLSRKLLRMMN-GQIRYIREPTKCFFLIHIKFPTTWETCLQS 2712
            GT W++ EG  LS+SRKLL++MN G ++Y++EP+KC+FLI ++F  T + C  S
Sbjct: 840  GTRWATKEGFRLSMSRKLLKLMNGGHVQYVKEPSKCYFLIEVEFQATRKRCKPS 893


>ref|XP_008225374.1| PREDICTED: phytochrome E isoform X1 [Prunus mume]
          Length = 1136

 Score = 1148 bits (2970), Expect = 0.0
 Identities = 572/913 (62%), Positives = 701/913 (76%), Gaps = 14/913 (1%)
 Frame = +1

Query: 1    QSQRFAVQAISRLQSVPGGDIGVACDTLVEDVRVLTGYDRVMVYKFYEDEHGEVISEIRR 180
            QSQ+ AV+AISRLQS+PGGDIGV CDT+VEDV+ LTGYDRVMVYKF+ED+HGEV+SEIRR
Sbjct: 210  QSQKLAVRAISRLQSLPGGDIGVLCDTVVEDVQKLTGYDRVMVYKFHEDDHGEVVSEIRR 269

Query: 181  SDLEPYLGLHYPATDIPQAARFLFQQNRVRMIYDCHSDPVPIIQSQELKQPLLLVNSTLR 360
            +DLE YLGLHYPATDIPQAARFLF+QNRVRMI DC+++PV IIQS+ELKQPL LVNSTLR
Sbjct: 270  ADLESYLGLHYPATDIPQAARFLFKQNRVRMICDCNANPVKIIQSEELKQPLCLVNSTLR 329

Query: 361  SPHACHTQYMANMGSIASLVMAILINENGSLKLWGLVACHHCSPRYVPFPLGYACEFLIQ 540
            SPH CH QYMANMGSIASLVMA++IN N   KLWGLV CHH SPRYVPFPL YACEFL+Q
Sbjct: 330  SPHGCHRQYMANMGSIASLVMAVIINGNDLTKLWGLVVCHHTSPRYVPFPLRYACEFLMQ 389

Query: 541  AFGLHLHRELILVSQLEEKKTLKTQTLLCDMLLRDVPFGIVTKSPNIMDLVKCDGAALYY 720
            AFGL L+ EL L +QL EKK L+TQTLLCDMLLRD P GIVT+SP+IMDLVKCDGAALYY
Sbjct: 390  AFGLQLYMELQLAAQLAEKKVLRTQTLLCDMLLRDAPSGIVTQSPSIMDLVKCDGAALYY 449

Query: 721  DGKCQLLGVTPNEKQIQDIADWLLTYDSESTGFTTDSLVDAGYPGAELLLDVVCGMATVR 900
             G C LLGVTP E Q++DIADWLL+   +STG +TDSL +AGYPGA LL D VCGMAT R
Sbjct: 450  GGTCWLLGVTPTESQVKDIADWLLSNHGDSTGLSTDSLAEAGYPGAPLLGDAVCGMATAR 509

Query: 901  INSTDFLFWFRSRTEKVVKWGGAKHHLEDKDNDGKMHPRSSFKAFLEEVKYRSLPWELLE 1080
             +S DFLFWFRS T + VKWGGAKHH EDKD+ G+MHPRSSFKAFLE VK RSLPWE+ E
Sbjct: 510  ASSKDFLFWFRSHTAEEVKWGGAKHHPEDKDDGGRMHPRSSFKAFLEVVKSRSLPWEVSE 569

Query: 1081 MNAIHSLQLIMRGQ-----------SGTGMSIERQLMTERVDELRSVASKMVNLIETAIV 1227
            +NAIHSLQLIMR                    + ++  + +DEL SVA +M  LIETA V
Sbjct: 570  INAIHSLQLIMRDSFQDMEESVSKAVNNAHQSDTEMQPQGIDELSSVACEMAKLIETASV 629

Query: 1228 PVIAVDSDGNVNGWNTKVAELTGLPDNGALGKSLINELVHEESRETVDNHLSRALQGEES 1407
            P+  VDS G +NGWNTK+AELTGL D+ A+GKSL NE+V E+SR  V++ L RALQGEE 
Sbjct: 630  PIFGVDSAGLINGWNTKMAELTGLQDSEAMGKSLANEIVCEDSRGAVEDLLCRALQGEED 689

Query: 1408 KNVQIKLRTFGSQQQNEAVYIVANACTTKNCTGNVIGVSFMGQDVTKEKALMDKFIRLQG 1587
            KN+++KLR FG  Q N  VY+VAN CT++N   NV+GV F+GQD+T EK +MDKFIRLQG
Sbjct: 690  KNIELKLRNFGLSQHNSVVYVVANTCTSRNHAKNVVGVCFVGQDITCEKVVMDKFIRLQG 749

Query: 1588 DYKAIIQSLDPLIPPIFASDENACCCEWNTAMEKLTGWTKGEAIGKILAGEIFGKLCQLK 1767
            DYKAIIQSL+PLIPPIFASDENACC EWN AMEKLTGWT+ + IGK+L GEIFG  C+LK
Sbjct: 750  DYKAIIQSLNPLIPPIFASDENACCSEWNAAMEKLTGWTRDDVIGKMLPGEIFGGFCRLK 809

Query: 1768 DQGAITEFMILLYQAICSHVTLKFPFAFFDKRGKYCKFVLTANKRVDMEGNIIGCFCFLQ 1947
             Q  +T+FMI+LYQ I      KFP  FFD++G + + +LTA+KR D  GNIIGCFCFLQ
Sbjct: 810  GQDTLTKFMIVLYQGISGQDIEKFPLGFFDRKGNFVEVILTASKRTDAGGNIIGCFCFLQ 869

Query: 1948 MAVPNLIQDVQ--NQQERKCLARLKELAYIQEETKAPLGGVRFAHRLLESSSLSDQMKRL 2121
            + +P+L Q ++   Q+ R+  ++LKEL Y+++E + PL G+RF HRLL+++++S+  K+ 
Sbjct: 870  IFLPDLQQPLEGHKQEGREGFSKLKELTYMRQEMRNPLNGIRFTHRLLQNTTISEYQKQF 929

Query: 2122 LKTSDACEKQMVKIIEDCSLESIEK-RSMELHKDWFSLGIAMDAIISQVMILLTEKKLQL 2298
            L TSDACE+Q++ +IED ++ SIE+  S++L+   F LG  +DAI+SQ MI L  K LQL
Sbjct: 930  LDTSDACERQIMTVIEDMNMRSIEEGSSVKLNMGEFVLGNILDAIVSQSMISLRAKNLQL 989

Query: 2299 NYEISEKTKVLSIYGDQIRXXXXXXXXXXXXXXXXSSSPEGWVNIEVELNSVLYQDSGPV 2478
             +EI E+ K LS++GDQIR                + SP+GWV I++     L QD    
Sbjct: 990  FHEIPEEVKSLSLHGDQIR-LQLVLSDFLLNVVNHAPSPDGWVEIKILPGLKLIQDGNNC 1048

Query: 2479 LQLQFRLAHPGEGLPPELVQDMVSGGTLWSSPEGVGLSLSRKLLRMMNGQIRYIREPTKC 2658
            ++LQFR+ HPG+GLP  L+QDM  GG  W++ EG+ L+LSRKLL  MNGQ++Y+RE  KC
Sbjct: 1049 IRLQFRMTHPGQGLPAALIQDMFEGGNRWTTQEGLCLNLSRKLLNRMNGQVQYVREHDKC 1108

Query: 2659 FFLIHIKFPTTWE 2697
            +FLI ++  T  E
Sbjct: 1109 YFLIDLELKTRKE 1121


>ref|XP_012454413.1| PREDICTED: phytochrome E isoform X1 [Gossypium raimondii]
          Length = 1128

 Score = 1147 bits (2968), Expect = 0.0
 Identities = 563/906 (62%), Positives = 693/906 (76%), Gaps = 11/906 (1%)
 Frame = +1

Query: 4    SQRFAVQAISRLQSVPGGDIGVACDTLVEDVRVLTGYDRVMVYKFYEDEHGEVISEIRRS 183
            SQ+ AV+AI+RLQ +PGGDIGV CDT+VEDV+ LTGYDRVMVYKF++D HGEV+SEIRRS
Sbjct: 211  SQKLAVRAIARLQLLPGGDIGVLCDTVVEDVQKLTGYDRVMVYKFHDDGHGEVVSEIRRS 270

Query: 184  DLEPYLGLHYPATDIPQAARFLFQQNRVRMIYDCHSDPVPIIQSQELKQPLLLVNSTLRS 363
            DLEPYLGLHYPATDIPQAARFLF+QNRVRMI DCH++PV +IQS ELKQ L LVNSTLRS
Sbjct: 271  DLEPYLGLHYPATDIPQAARFLFKQNRVRMICDCHANPVKVIQSDELKQHLCLVNSTLRS 330

Query: 364  PHACHTQYMANMGSIASLVMAILINENGSLKLWGLVACHHCSPRYVPFPLGYACEFLIQA 543
            PH CHTQYMANMGSIASLVMA++IN N S KLWGLV CHH SPRYVPFPL YACEFL+QA
Sbjct: 331  PHGCHTQYMANMGSIASLVMAVVINGNDSTKLWGLVVCHHTSPRYVPFPLRYACEFLMQA 390

Query: 544  FGLHLHRELILVSQLEEKKTLKTQTLLCDMLLRDVPFGIVTKSPNIMDLVKCDGAALYYD 723
            FGL L+ EL L SQL EKK L+ QTLLCDMLLRD PFGIVT+SPNIMDLVKCDGAALYY 
Sbjct: 391  FGLQLYMELQLASQLTEKKILRAQTLLCDMLLRDAPFGIVTQSPNIMDLVKCDGAALYYR 450

Query: 724  GKCQLLGVTPNEKQIQDIADWLLTYDSESTGFTTDSLVDAGYPGAELLLDVVCGMATVRI 903
            GKC LLGVTP E Q++DIA WLLT   +STG +TDSL DAGYPGA LL D VCG+AT RI
Sbjct: 451  GKCWLLGVTPTESQVKDIAQWLLTTHEDSTGLSTDSLADAGYPGAALLGDAVCGIATARI 510

Query: 904  NSTDFLFWFRSRTEKVVKWGGAKHHLEDKDNDGKMHPRSSFKAFLEEVKYRSLPWELLEM 1083
             S DFLFWFRS T K VKWGGAKHHLEDKD+ G+MHPRSSF AFLE VK RSLPWE+ E+
Sbjct: 511  TSKDFLFWFRSHTAKEVKWGGAKHHLEDKDDSGRMHPRSSFNAFLEVVKSRSLPWEIPEI 570

Query: 1084 NAIHSLQLIMR---------GQSGTGMSIERQLMTERVDELRSVASKMVNLIETAIVPVI 1236
            NAIHSLQLIMR         G        +    TE ++E+ SVA +MV LIET   PV 
Sbjct: 571  NAIHSLQLIMRDSFQDMEESGSKELACGQQNDTETEGINEIISVAYEMVRLIETGTAPVF 630

Query: 1237 AVDSDGNVNGWNTKVAELTGLPDNGALGKSLINELVHEESRETVDNHLSRALQGEESKNV 1416
             VD+ G +NGWN KVAELTGL  + A+GKSL +E+VHE+SRE  +N + RALQGEE KNV
Sbjct: 631  GVDTAGIINGWNAKVAELTGLQADHAIGKSLADEVVHEDSREVYENLIGRALQGEEDKNV 690

Query: 1417 QIKLRTFGSQQQNEAVYIVANACTTKNCTGNVIGVSFMGQDVTKEKALMDKFIRLQGDYK 1596
            ++KLR F   ++N  VYIV NACT+++   ++IGV F+GQD+T EK ++DKFIRLQGDY+
Sbjct: 691  ELKLRNFKPHRKNAVVYIVVNACTSRDYANDIIGVCFVGQDITSEKVVLDKFIRLQGDYR 750

Query: 1597 AIIQSLDPLIPPIFASDENACCCEWNTAMEKLTGWTKGEAIGKILAGEIFGKLCQLKDQG 1776
            AIIQSL PLIPPIFASDEN CC EWN AMEKLTG+++ E IGK+LAGEIFG LCQLK Q 
Sbjct: 751  AIIQSLSPLIPPIFASDENTCCSEWNAAMEKLTGYSRNEVIGKMLAGEIFGGLCQLKGQD 810

Query: 1777 AITEFMILLYQAICSHVTLKFPFAFFDKRGKYCKFVLTANKRVDMEGNIIGCFCFLQMAV 1956
            ++T FMI+LYQ I      KFPF+FFD++G++ +  + ANKR   +GNIIGCFCFLQ+ V
Sbjct: 811  SMTRFMIMLYQGISGRNAEKFPFSFFDRKGEFVEVYIVANKRTAADGNIIGCFCFLQVIV 870

Query: 1957 PNLIQ--DVQNQQERKCLARLKELAYIQEETKAPLGGVRFAHRLLESSSLSDQMKRLLKT 2130
            P++ Q  +   Q++++   +LK L Y+++E K PL G+RF H+LLE++++S+  K+ L+T
Sbjct: 871  PDMQQASEEHKQEDKELFTKLKHLVYMRQEMKNPLNGIRFTHKLLETTAISENQKQFLET 930

Query: 2131 SDACEKQMVKIIEDCSLESIEKRSMELHKDWFSLGIAMDAIISQVMILLTEKKLQLNYEI 2310
            SDACE+Q+  IIED    S ++ SMEL  + F LG  +DA++SQVMIL+ E+ LQL +E 
Sbjct: 931  SDACERQISAIIEDMDFRSNDEGSMELSMEEFVLGNVLDAVVSQVMILIKERNLQLFHET 990

Query: 2311 SEKTKVLSIYGDQIRXXXXXXXXXXXXXXXXSSSPEGWVNIEVELNSVLYQDSGPVLQLQ 2490
             ++   LS+YGD+IR                + SP+GWV I++     L +D    L+LQ
Sbjct: 991  PKEIMALSLYGDRIR-LQLVLSDFLLNMVHHAPSPDGWVEIKISPGLKLLRDGNEFLRLQ 1049

Query: 2491 FRLAHPGEGLPPELVQDMVSGGTLWSSPEGVGLSLSRKLLRMMNGQIRYIREPTKCFFLI 2670
            FR+ HPG+GLP  L+Q+M+  G  W++ EG+GL++SRKLL  MNG ++Y+RE  KC+FL+
Sbjct: 1050 FRMTHPGKGLPSTLIQEMLESGNSWTTQEGLGLNMSRKLLNRMNGHVQYVREHNKCYFLV 1109

Query: 2671 HIKFPT 2688
             ++  T
Sbjct: 1110 DLEIKT 1115


>gb|KHG11315.1| Phytochrome E [Gossypium arboreum]
          Length = 1127

 Score = 1145 bits (2963), Expect = 0.0
 Identities = 564/906 (62%), Positives = 691/906 (76%), Gaps = 11/906 (1%)
 Frame = +1

Query: 4    SQRFAVQAISRLQSVPGGDIGVACDTLVEDVRVLTGYDRVMVYKFYEDEHGEVISEIRRS 183
            SQ+ AV+AI+RLQS+PGGDIGV CDT+VEDV+ LTGYDRVMVYKF++D HGEV+SEIRRS
Sbjct: 211  SQKLAVRAIARLQSLPGGDIGVLCDTVVEDVQKLTGYDRVMVYKFHDDGHGEVVSEIRRS 270

Query: 184  DLEPYLGLHYPATDIPQAARFLFQQNRVRMIYDCHSDPVPIIQSQELKQPLLLVNSTLRS 363
            DLEPYLGLHYPATDIPQAARFLF+QNRVRMI DCH++PV +IQS ELKQ L LVNSTLRS
Sbjct: 271  DLEPYLGLHYPATDIPQAARFLFKQNRVRMICDCHANPVKVIQSDELKQHLCLVNSTLRS 330

Query: 364  PHACHTQYMANMGSIASLVMAILINENGSLKLWGLVACHHCSPRYVPFPLGYACEFLIQA 543
            PH CHTQYMANMGSIASLVMA++IN N S KLWGLV CHH SPRYVPFPL YACEFL+QA
Sbjct: 331  PHGCHTQYMANMGSIASLVMAVVINGNDSTKLWGLVVCHHTSPRYVPFPLRYACEFLMQA 390

Query: 544  FGLHLHRELILVSQLEEKKTLKTQTLLCDMLLRDVPFGIVTKSPNIMDLVKCDGAALYYD 723
            FGL L+ EL L SQL EKK L+TQTLLCDMLLRD P GIVT+SPNIMDLVKCDGAAL+Y 
Sbjct: 391  FGLQLYMELQLASQLIEKKILRTQTLLCDMLLRDAPLGIVTQSPNIMDLVKCDGAALHYR 450

Query: 724  GKCQLLGVTPNEKQIQDIADWLLTYDSESTGFTTDSLVDAGYPGAELLLDVVCGMATVRI 903
            GKC LLGVTP E Q++DI  WLLT   +STG +TDSL DAGYPGA LL D VCGMAT RI
Sbjct: 451  GKCWLLGVTPTESQVKDITQWLLTTHEDSTGLSTDSLADAGYPGAALLGDAVCGMATARI 510

Query: 904  NSTDFLFWFRSRTEKVVKWGGAKHHLEDKDNDGKMHPRSSFKAFLEEVKYRSLPWELLEM 1083
             S DFLFWFRS T K VKWGGAKHH EDKD+ G+MHPRSSF AFLE VK RSLPWE+ E+
Sbjct: 511  TSKDFLFWFRSHTAKEVKWGGAKHHPEDKDDSGRMHPRSSFNAFLEVVKSRSLPWEIPEI 570

Query: 1084 NAIHSLQLIMR---------GQSGTGMSIERQLMTERVDELRSVASKMVNLIETAIVPVI 1236
            NAIHS+QLIMR         G        +    TE ++E+ SVA +MV LIET   PV 
Sbjct: 571  NAIHSIQLIMRDSFRDMEESGSKELACGQQNDTETEGINEISSVAYEMVRLIETGTAPVF 630

Query: 1237 AVDSDGNVNGWNTKVAELTGLPDNGALGKSLINELVHEESRETVDNHLSRALQGEESKNV 1416
             VD+ G +NGWN KVAELTGL  + A+GKSL +E+VHE+S+E   N + RALQGEE KNV
Sbjct: 631  GVDTAGIINGWNAKVAELTGLQADHAIGKSLADEVVHEDSQEVYKNLIGRALQGEEDKNV 690

Query: 1417 QIKLRTFGSQQQNEAVYIVANACTTKNCTGNVIGVSFMGQDVTKEKALMDKFIRLQGDYK 1596
            ++KLR F   ++N  VYIV NACT+++   ++IGV F+GQD+T EK ++DKFIRLQGDY+
Sbjct: 691  ELKLRNFEPHRKNAVVYIVVNACTSRDYANDIIGVCFVGQDITSEKVVLDKFIRLQGDYR 750

Query: 1597 AIIQSLDPLIPPIFASDENACCCEWNTAMEKLTGWTKGEAIGKILAGEIFGKLCQLKDQG 1776
            AIIQSL PLIPPIFASDEN CC EWN AMEKLTG+++ E IGKILAGEIFG LCQLK Q 
Sbjct: 751  AIIQSLSPLIPPIFASDENTCCSEWNAAMEKLTGYSRNEVIGKILAGEIFGGLCQLKGQD 810

Query: 1777 AITEFMILLYQAICSHVTLKFPFAFFDKRGKYCKFVLTANKRVDMEGNIIGCFCFLQMAV 1956
            ++T FMI+LYQ I      KFPF+FFD++GK+ +  + AN+R   +GNIIGCFCFLQ+ V
Sbjct: 811  SMTRFMIMLYQGISGRDAEKFPFSFFDRKGKFVEVYIVANRRTAADGNIIGCFCFLQVIV 870

Query: 1957 PNLIQ--DVQNQQERKCLARLKELAYIQEETKAPLGGVRFAHRLLESSSLSDQMKRLLKT 2130
            P + Q  +   Q++++   +LK L Y+++E K PL G+RF H+LLE++++S+  K+ L+T
Sbjct: 871  PAMQQASEEHKQEDKELFTKLKHLVYMRQEMKNPLNGIRFTHKLLETTAISENQKQFLET 930

Query: 2131 SDACEKQMVKIIEDCSLESIEKRSMELHKDWFSLGIAMDAIISQVMILLTEKKLQLNYEI 2310
            SDACE+Q+  IIED    S ++ SMEL  + F LG  +DA++SQVMILL E+ LQL +E 
Sbjct: 931  SDACERQISAIIEDIDFRSDDEGSMELSMEEFVLGNVLDAVVSQVMILLKERNLQLFHET 990

Query: 2311 SEKTKVLSIYGDQIRXXXXXXXXXXXXXXXXSSSPEGWVNIEVELNSVLYQDSGPVLQLQ 2490
             ++ K LS+YGD+IR                + SP+GWV I++     L +D    L+LQ
Sbjct: 991  PKEIKALSLYGDRIR-LQLVLSDFLLNMVHHAPSPDGWVEIKISRGLKLLRDGNEFLRLQ 1049

Query: 2491 FRLAHPGEGLPPELVQDMVSGGTLWSSPEGVGLSLSRKLLRMMNGQIRYIREPTKCFFLI 2670
            FR+ HPG+GLP  L+Q+M+  G  W++ EG+GL++SRKLL  MNG ++Y+RE  KC+FLI
Sbjct: 1050 FRMTHPGKGLPSTLIQEMLESGNSWTTQEGLGLNMSRKLLNRMNGHVQYVREHNKCYFLI 1109

Query: 2671 HIKFPT 2688
             ++  T
Sbjct: 1110 DLEIKT 1115


>ref|XP_012454415.1| PREDICTED: phytochrome E isoform X2 [Gossypium raimondii]
            gi|763802818|gb|KJB69756.1| hypothetical protein
            B456_011G040900 [Gossypium raimondii]
            gi|763802819|gb|KJB69757.1| hypothetical protein
            B456_011G040900 [Gossypium raimondii]
            gi|763802820|gb|KJB69758.1| hypothetical protein
            B456_011G040900 [Gossypium raimondii]
          Length = 1127

 Score = 1142 bits (2954), Expect = 0.0
 Identities = 562/906 (62%), Positives = 692/906 (76%), Gaps = 11/906 (1%)
 Frame = +1

Query: 4    SQRFAVQAISRLQSVPGGDIGVACDTLVEDVRVLTGYDRVMVYKFYEDEHGEVISEIRRS 183
            SQ+ AV+AI+RLQ +PGGDIGV CDT+VEDV+ LTGYDRVMVYKF++D HGEV+SEIRRS
Sbjct: 211  SQKLAVRAIARLQLLPGGDIGVLCDTVVEDVQKLTGYDRVMVYKFHDDGHGEVVSEIRRS 270

Query: 184  DLEPYLGLHYPATDIPQAARFLFQQNRVRMIYDCHSDPVPIIQSQELKQPLLLVNSTLRS 363
            DLEPYLGLHYPATDIPQAARFLF+QNRVRMI DCH++PV +IQS ELKQ L LVNSTLRS
Sbjct: 271  DLEPYLGLHYPATDIPQAARFLFKQNRVRMICDCHANPVKVIQSDELKQHLCLVNSTLRS 330

Query: 364  PHACHTQYMANMGSIASLVMAILINENGSLKLWGLVACHHCSPRYVPFPLGYACEFLIQA 543
            PH CHTQYMANMGSIASLVMA++IN N S KLWGLV CHH SPRYVPFPL YACEFL+QA
Sbjct: 331  PHGCHTQYMANMGSIASLVMAVVINGNDSTKLWGLVVCHHTSPRYVPFPLRYACEFLMQA 390

Query: 544  FGLHLHRELILVSQLEEKKTLKTQTLLCDMLLRDVPFGIVTKSPNIMDLVKCDGAALYYD 723
            FGL L+ EL L SQL EKK L+ QTLLCDMLLRD PFGIVT+SPNIMDLVKCDGAALYY 
Sbjct: 391  FGLQLYMELQLASQLTEKKILRAQTLLCDMLLRDAPFGIVTQSPNIMDLVKCDGAALYYR 450

Query: 724  GKCQLLGVTPNEKQIQDIADWLLTYDSESTGFTTDSLVDAGYPGAELLLDVVCGMATVRI 903
            GKC LLGVTP E Q++DIA WLLT   +STG +TDSL DAGYPGA LL D VCG+AT RI
Sbjct: 451  GKCWLLGVTPTESQVKDIAQWLLTTHEDSTGLSTDSLADAGYPGAALLGDAVCGIATARI 510

Query: 904  NSTDFLFWFRSRTEKVVKWGGAKHHLEDKDNDGKMHPRSSFKAFLEEVKYRSLPWELLEM 1083
             S DFLFWFRS T K VKWGGAKHHLEDKD+ G+MHPRSSF AFLE VK RSLPWE+ E+
Sbjct: 511  TSKDFLFWFRSHTAKEVKWGGAKHHLEDKDDSGRMHPRSSFNAFLEVVKSRSLPWEIPEI 570

Query: 1084 NAIHSLQLIMR---------GQSGTGMSIERQLMTERVDELRSVASKMVNLIETAIVPVI 1236
            NAIHSLQLIMR         G        +    TE ++E+ SVA +MV LIET   PV 
Sbjct: 571  NAIHSLQLIMRDSFQDMEESGSKELACGQQNDTETEGINEIISVAYEMVRLIETGTAPVF 630

Query: 1237 AVDSDGNVNGWNTKVAELTGLPDNGALGKSLINELVHEESRETVDNHLSRALQGEESKNV 1416
             VD+ G +NGWN KVAELTGL  + A+GKSL +E+VHE+SRE  +N + RALQGEE KNV
Sbjct: 631  GVDTAGIINGWNAKVAELTGLQADHAIGKSLADEVVHEDSREVYENLIGRALQGEEDKNV 690

Query: 1417 QIKLRTFGSQQQNEAVYIVANACTTKNCTGNVIGVSFMGQDVTKEKALMDKFIRLQGDYK 1596
            ++KLR F   ++N  VYIV NACT+++   ++IGV F+GQD+T EK ++DKFIRLQGDY+
Sbjct: 691  ELKLRNFKPHRKNAVVYIVVNACTSRDYANDIIGVCFVGQDITSEKVVLDKFIRLQGDYR 750

Query: 1597 AIIQSLDPLIPPIFASDENACCCEWNTAMEKLTGWTKGEAIGKILAGEIFGKLCQLKDQG 1776
            AIIQSL PLIPPIFASDEN CC EWN AMEKLTG+++ E IGK+LAGEIFG LCQLK Q 
Sbjct: 751  AIIQSLSPLIPPIFASDENTCCSEWNAAMEKLTGYSRNEVIGKMLAGEIFGGLCQLKGQD 810

Query: 1777 AITEFMILLYQAICSHVTLKFPFAFFDKRGKYCKFVLTANKRVDMEGNIIGCFCFLQMAV 1956
            ++T FMI+LYQ I      KFPF+FFD++G++ +  + ANKR   +GNIIGCFCFLQ+ V
Sbjct: 811  SMTRFMIMLYQGISGRNAEKFPFSFFDRKGEFVEVYIVANKRTAADGNIIGCFCFLQVIV 870

Query: 1957 PNLIQ--DVQNQQERKCLARLKELAYIQEETKAPLGGVRFAHRLLESSSLSDQMKRLLKT 2130
            P++ Q  +   Q++++   +LK L Y+++E K PL G+RF H+LLE++++S+  K+ L+T
Sbjct: 871  PDMQQASEEHKQEDKELFTKLKHLVYMRQEMKNPLNGIRFTHKLLETTAISENQKQFLET 930

Query: 2131 SDACEKQMVKIIEDCSLESIEKRSMELHKDWFSLGIAMDAIISQVMILLTEKKLQLNYEI 2310
            SDACE+Q+  IIED    S ++  MEL  + F LG  +DA++SQVMIL+ E+ LQL +E 
Sbjct: 931  SDACERQISAIIEDMDFRSNDE-GMELSMEEFVLGNVLDAVVSQVMILIKERNLQLFHET 989

Query: 2311 SEKTKVLSIYGDQIRXXXXXXXXXXXXXXXXSSSPEGWVNIEVELNSVLYQDSGPVLQLQ 2490
             ++   LS+YGD+IR                + SP+GWV I++     L +D    L+LQ
Sbjct: 990  PKEIMALSLYGDRIR-LQLVLSDFLLNMVHHAPSPDGWVEIKISPGLKLLRDGNEFLRLQ 1048

Query: 2491 FRLAHPGEGLPPELVQDMVSGGTLWSSPEGVGLSLSRKLLRMMNGQIRYIREPTKCFFLI 2670
            FR+ HPG+GLP  L+Q+M+  G  W++ EG+GL++SRKLL  MNG ++Y+RE  KC+FL+
Sbjct: 1049 FRMTHPGKGLPSTLIQEMLESGNSWTTQEGLGLNMSRKLLNRMNGHVQYVREHNKCYFLV 1108

Query: 2671 HIKFPT 2688
             ++  T
Sbjct: 1109 DLEIKT 1114


>gb|ACC60972.1| phytochrome E [Vitis riparia]
          Length = 1124

 Score = 1136 bits (2939), Expect = 0.0
 Identities = 566/902 (62%), Positives = 691/902 (76%), Gaps = 10/902 (1%)
 Frame = +1

Query: 1    QSQRFAVQAISRLQSVPGGDIGVACDTLVEDVRVLTGYDRVMVYKFYEDEHGEVISEIRR 180
            QSQ+ AV+AISRLQS+PGGDIGV CDT+VEDV+ LTGYDRVMVYKF++D+HGEV+SEIRR
Sbjct: 207  QSQKLAVRAISRLQSLPGGDIGVLCDTVVEDVQKLTGYDRVMVYKFHDDDHGEVVSEIRR 266

Query: 181  SDLEPYLGLHYPATDIPQAARFLFQQNRVRMIYDCHSDPVPIIQSQELKQPLLLVNSTLR 360
            SDLEPYLGLHYPATDIPQAARFLF+QNRVR+I DC++  V +IQS+ELKQPL LVNSTLR
Sbjct: 267  SDLEPYLGLHYPATDIPQAARFLFKQNRVRIICDCNAKAVRVIQSEELKQPLCLVNSTLR 326

Query: 361  SPHACHTQYMANMGSIASLVMAILINENGSLKLWGLVACHHCSPRYVPFPLGYACEFLIQ 540
            SPH CH QYM NMG IASL MA++IN N + KLWGLV CHH SPRYVPFPL YACEFL+Q
Sbjct: 327  SPHGCHLQYMVNMGCIASLAMAVVINGNDATKLWGLVVCHHTSPRYVPFPLRYACEFLMQ 386

Query: 541  AFGLHLHRELILVSQLEEKKTLKTQTLLCDMLLRDVPFGIVTKSPNIMDLVKCDGAALYY 720
            AFGL L+ EL L SQL EKK L+ QTLLCDMLLR+ P GIVT SP+IMDL+KCDGAAL+Y
Sbjct: 387  AFGLQLYMELQLASQLAEKKILRMQTLLCDMLLREAPLGIVTHSPSIMDLLKCDGAALHY 446

Query: 721  DGKCQLLGVTPNEKQIQDIADWLLTYDSESTGFTTDSLVDAGYPGAELLLDVVCGMATVR 900
             G+C LLGVTP E Q++DIA+WLLT   +STG +TDSL DAGYPGA LL D VCGMAT R
Sbjct: 447  GGRCWLLGVTPTESQVKDIAEWLLTEHGDSTGLSTDSLADAGYPGAALLGDAVCGMATAR 506

Query: 901  INSTDFLFWFRSRTEKVVKWGGAKHHLEDKDNDGKMHPRSSFKAFLEEVKYRSLPWELLE 1080
            I S DFLFWFRS T K VKWGGAKHH EDKD+ G+MHPRSSFKAFLE VK RSLPWE+ E
Sbjct: 507  ITSKDFLFWFRSHTAKEVKWGGAKHHPEDKDDGGRMHPRSSFKAFLEVVKSRSLPWEVSE 566

Query: 1081 MNAIHSLQLIMR-------GQSGTGMSIERQLMTER--VDELRSVASKMVNLIETAIVPV 1233
            +NAIHSLQLIMR         SG  M   ++  +E   ++EL SVA +MV LIETA  P+
Sbjct: 567  INAIHSLQLIMRDSFQDIEDSSGKVMVHAQKYDSEMQGLNELSSVACEMVKLIETATAPI 626

Query: 1234 IAVDSDGNVNGWNTKVAELTGLPDNGALGKSLINELVHEESRETVDNHLSRALQGEESKN 1413
              VDS G +NGWN K+AELT L    A+GKSL++E+VHE+ R  VDN L RALQG+E KN
Sbjct: 627  FGVDSSGCINGWNAKIAELTELQAKEAMGKSLVDEIVHEDLRGAVDNLLCRALQGKEDKN 686

Query: 1414 VQIKLRTFGSQQQNEAVYIVANACTTKNCTGNVIGVSFMGQDVTKEKALMDKFIRLQGDY 1593
            V++KL+ FG  QQ+ A+YIV NACT+++ T +++GV F+GQD+T EK +MDKFIRLQGDY
Sbjct: 687  VELKLKKFGLNQQDSALYIVVNACTSRDYTNDIVGVCFVGQDITSEKIVMDKFIRLQGDY 746

Query: 1594 KAIIQSLDPLIPPIFASDENACCCEWNTAMEKLTGWTKGEAIGKILAGEIFGKLCQLKDQ 1773
            KAI+QSL+PLIPPIFASD NACC EWNT++EKLTGW + E I K+L GE+FG LC LK Q
Sbjct: 747  KAIVQSLNPLIPPIFASDGNACCSEWNTSLEKLTGWMRHEVIRKMLPGEVFGGLCPLKSQ 806

Query: 1774 GAITEFMILLYQAICSHVTLKFPFAFFDKRGKYCKFVLTANKRVDMEGNIIGCFCFLQMA 1953
              +T F ILLYQAI    T KFPF FFDK GK  + +LTANKR D  GN+IGCFCFLQ+ 
Sbjct: 807  DTLTRFTILLYQAISGQDTEKFPFGFFDKSGKLVEVLLTANKRTDANGNVIGCFCFLQID 866

Query: 1954 VPNLIQDVQNQQE-RKCLARLKELAYIQEETKAPLGGVRFAHRLLESSSLSDQMKRLLKT 2130
             P+  Q + +  E R+C ++ KELAYI++E K PL G+RF H+LLE+++ S   K+ L+T
Sbjct: 867  TPDKHQGLGDGPEYRECFSKFKELAYIRQEMKNPLNGIRFTHKLLETTATSVYQKQFLET 926

Query: 2131 SDACEKQMVKIIEDCSLESIEKRSMELHKDWFSLGIAMDAIISQVMILLTEKKLQLNYEI 2310
            S+ACE+QM+ II D  +  IE+ SMEL+ + F LG  +DA++SQVM+LL EKKLQL  EI
Sbjct: 927  SEACERQMMSIIADIDMGIIEEGSMELNVEEFLLGNVLDAVVSQVMMLLKEKKLQLVCEI 986

Query: 2311 SEKTKVLSIYGDQIRXXXXXXXXXXXXXXXXSSSPEGWVNIEVELNSVLYQDSGPVLQLQ 2490
             E+ K L + GDQI+                 SS +GW+ I++     + QD    + LQ
Sbjct: 987  PEEIKTLPLSGDQIKLQQVLSDFLHNIVHHAPSS-DGWIEIKISTGLKMIQDFNEFIHLQ 1045

Query: 2491 FRLAHPGEGLPPELVQDMVSGGTLWSSPEGVGLSLSRKLLRMMNGQIRYIREPTKCFFLI 2670
            FR+ H G+GLPP+L+QDM  GG  W++ EG+GL+LSRKLL  MNG+++Y+RE  KC+FL+
Sbjct: 1046 FRMTHIGQGLPPDLIQDMFEGGDQWNTQEGLGLNLSRKLLSAMNGRVQYVREHGKCYFLV 1105

Query: 2671 HI 2676
             I
Sbjct: 1106 EI 1107


>ref|XP_006449616.1| hypothetical protein CICLE_v10014092mg [Citrus clementina]
            gi|557552227|gb|ESR62856.1| hypothetical protein
            CICLE_v10014092mg [Citrus clementina]
          Length = 1130

 Score = 1129 bits (2921), Expect = 0.0
 Identities = 556/915 (60%), Positives = 697/915 (76%), Gaps = 19/915 (2%)
 Frame = +1

Query: 1    QSQRFAVQAISRLQSVPGGDIGVACDTLVEDVRVLTGYDRVMVYKFYEDEHGEVISEIRR 180
            QSQ+ AV AISRLQ++PGGDIG+ CDT+VEDV+ LTGYDRVM+YKF++D+HGEV+SEIRR
Sbjct: 211  QSQKLAVCAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVMLYKFHDDDHGEVVSEIRR 270

Query: 181  SDLEPYLGLHYPATDIPQAARFLFQQNRVRMIYDCHSDPVPIIQSQELKQPLLLVNSTLR 360
            SDLEPYLG+H+PA DIPQAARFLF+QNRVRMI DCH+ PV +IQS+ELKQPL LVNSTLR
Sbjct: 271  SDLEPYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMVIQSKELKQPLCLVNSTLR 330

Query: 361  SPHACHTQYMANMGSIASLVMAILINENGSLKLWGLVACHHCSPRYVPFPLGYACEFLIQ 540
            SPH CH QYM NMGSIASLVMA++IN   S+KLWGLV CHH SPRY+PFPL YACEFL+Q
Sbjct: 331  SPHGCHLQYMTNMGSIASLVMAVIINSKDSMKLWGLVVCHHTSPRYIPFPLRYACEFLVQ 390

Query: 541  AFGLHLHRELILVSQLEEKKTLKTQTLLCDMLLRDVPFGIVTKSPNIMDLVKCDGAALYY 720
            AF L L+ EL +  QL EK  L+TQ LLCDMLLRD PF IVT+SP+IMDLVKCDGAALYY
Sbjct: 391  AFSLQLYMELQVAMQLAEKNILRTQVLLCDMLLRDAPFSIVTQSPSIMDLVKCDGAALYY 450

Query: 721  DGKCQLLGVTPNEKQIQDIADWLLTYDSESTGFTTDSLVDAGYPGAELLLDVVCGMATVR 900
             G+C L+GVTP E Q++D+A WLL    + TG +TDSL +AGYPGA LL   VCGMAT R
Sbjct: 451  GGRCWLVGVTPTESQLKDVACWLLNNHGDCTGLSTDSLAEAGYPGAALLGQAVCGMATAR 510

Query: 901  INSTDFLFWFRSRTEKVVKWGGAKHHLEDKDNDGKMHPRSSFKAFLEEVKYRSLPWELLE 1080
            I S DFLFWFRS T K VKWGGAKHH E KDN GKMHPRSSFKAFLE VK RSLPWE+LE
Sbjct: 511  ITSKDFLFWFRSHTAKEVKWGGAKHHPEHKDNGGKMHPRSSFKAFLEVVKNRSLPWEVLE 570

Query: 1081 MNAIHSLQLIMR----------GQSGTGMSIERQLMTERVDELRSVASKMVNLIETAIVP 1230
            +NAIHSLQ++MR               G +++     + VDEL SVA +MV LIETA  P
Sbjct: 571  INAIHSLQIVMRDSFQEMEEENDSKVQGNTLQNGSKMQGVDELSSVACEMVRLIETATAP 630

Query: 1231 VIAVDSDGNVNGWNTKVAELTGLPDNGALGKSLINELVHEESRETVDNHLSRALQGEESK 1410
            +  VDS G +NGWN KVAELTGLP + A+GKSLI+E+VHEES+  V+N + RAL G+E K
Sbjct: 631  IFGVDSSGTINGWNAKVAELTGLPASEAMGKSLIDEVVHEESQGAVENLICRALLGKEDK 690

Query: 1411 NVQIKLRTFGSQQQNEAVYIVANACTTKNCTGNVIGVSFMGQDVTKEKALMDKFIRLQGD 1590
            NV++KLR F  Q+Q+  VYI+ NACT+++   NV GV F+GQD+T EK LMDKFIRLQGD
Sbjct: 691  NVELKLRKFELQKQHSVVYILVNACTSRDYKNNVKGVCFVGQDITHEKVLMDKFIRLQGD 750

Query: 1591 YKAIIQSLDPLIPPIFASDENACCCEWNTAMEKLTGWTKGEAIGKILAGEIFGKLCQLKD 1770
            Y+AIIQS++PLIPPIFASDENACC EWNTAMEK+TGW + E IGK+L  EIFG  C++K 
Sbjct: 751  YEAIIQSVNPLIPPIFASDENACCSEWNTAMEKVTGWMRHEVIGKMLPREIFGSFCRMKG 810

Query: 1771 QGAITEFMILLYQAICSHVTLKFPFAFFDKRGKYCKFVLTANKRVDMEGNIIGCFCFLQM 1950
            Q  +T+FMILLYQ I    T  FPF FF+++G++ +  LTA++R D EG +IGCFCF+Q+
Sbjct: 811  QDMLTKFMILLYQGITGQGTENFPFGFFNRQGQFVEVTLTASRRTDAEGKVIGCFCFMQI 870

Query: 1951 AVPN---LIQDVQNQQERKCL------ARLKELAYIQEETKAPLGGVRFAHRLLESSSLS 2103
             VP+   L+ D+Q   E + L      A++KELAYI++E K PL G+RF H+LLESSS+S
Sbjct: 871  LVPDLQLLVPDLQPALEAQGLEDMDIFAKIKELAYIRQEVKNPLNGIRFVHKLLESSSIS 930

Query: 2104 DQMKRLLKTSDACEKQMVKIIEDCSLESIEKRSMELHKDWFSLGIAMDAIISQVMILLTE 2283
            +  ++ L+TSDACE+Q++ II+   L  IE+ +MEL+ + F LG  +DA++SQVM+ L +
Sbjct: 931  ENQRQYLETSDACERQIMTIIDGMDLRCIEEGNMELNLEEFLLGNILDAVVSQVMVFLRD 990

Query: 2284 KKLQLNYEISEKTKVLSIYGDQIRXXXXXXXXXXXXXXXXSSSPEGWVNIEVELNSVLYQ 2463
            + LQL ++I E+ K LS+YGD+IR                + SP+GWV I+V     L +
Sbjct: 991  RNLQLLHDIPEEIKALSLYGDRIR-LQLVLSDFLHCVVRHAPSPDGWVEIKVLPGLRLIK 1049

Query: 2464 DSGPVLQLQFRLAHPGEGLPPELVQDMVSGGTLWSSPEGVGLSLSRKLLRMMNGQIRYIR 2643
            D+   + +QFRL HPGEG+P  L++DM +G   W++PEG+GL LSRKLL MMNG++RY+R
Sbjct: 1050 DADQFVHVQFRLTHPGEGIPSHLIEDMYNGRNQWTTPEGLGLKLSRKLLIMMNGRVRYVR 1109

Query: 2644 EPTKCFFLIHIKFPT 2688
            E +KC+F+I ++  T
Sbjct: 1110 ENSKCYFVIDLELKT 1124


>ref|XP_002271671.1| PREDICTED: phytochrome E [Vitis vinifera] gi|183239020|gb|ACC60968.1|
            phytochrome E [Vitis vinifera]
          Length = 1124

 Score = 1129 bits (2921), Expect = 0.0
 Identities = 564/902 (62%), Positives = 689/902 (76%), Gaps = 10/902 (1%)
 Frame = +1

Query: 1    QSQRFAVQAISRLQSVPGGDIGVACDTLVEDVRVLTGYDRVMVYKFYEDEHGEVISEIRR 180
            QSQ+ AV+AISRLQS+PGGDIGV CDT+VEDV+ LTGYDRVMVYKF++D+HGEV+SEIRR
Sbjct: 207  QSQKLAVRAISRLQSLPGGDIGVLCDTVVEDVQKLTGYDRVMVYKFHDDDHGEVVSEIRR 266

Query: 181  SDLEPYLGLHYPATDIPQAARFLFQQNRVRMIYDCHSDPVPIIQSQELKQPLLLVNSTLR 360
            SDLEPYLGLHYPATDIPQAARFLF+QNRVR+I DC++  V +IQS+ELKQPL LVNSTLR
Sbjct: 267  SDLEPYLGLHYPATDIPQAARFLFKQNRVRIICDCNAKAVRVIQSEELKQPLCLVNSTLR 326

Query: 361  SPHACHTQYMANMGSIASLVMAILINENGSLKLWGLVACHHCSPRYVPFPLGYACEFLIQ 540
            SPH CH QYM NMG IASL MA++IN N + KLWGLV CHH SPRYVPFPL YACEFL+Q
Sbjct: 327  SPHGCHLQYMFNMGCIASLAMAVVINGNDATKLWGLVVCHHTSPRYVPFPLRYACEFLMQ 386

Query: 541  AFGLHLHRELILVSQLEEKKTLKTQTLLCDMLLRDVPFGIVTKSPNIMDLVKCDGAALYY 720
            AFGL L+ EL L SQL EKK L+ QTLLCDMLLR+ P GIVT SP+IMDL+KCDGAALYY
Sbjct: 387  AFGLQLYMELQLASQLAEKKILRMQTLLCDMLLREAPLGIVTHSPSIMDLLKCDGAALYY 446

Query: 721  DGKCQLLGVTPNEKQIQDIADWLLTYDSESTGFTTDSLVDAGYPGAELLLDVVCGMATVR 900
             G+C LLGVTP E Q++DIA+WLLT   +STG +TDSL DAGYPGA LL D VCGMAT R
Sbjct: 447  GGRCWLLGVTPTESQVKDIAEWLLTEHGDSTGLSTDSLADAGYPGAALLGDAVCGMATAR 506

Query: 901  INSTDFLFWFRSRTEKVVKWGGAKHHLEDKDNDGKMHPRSSFKAFLEEVKYRSLPWELLE 1080
            I S DFL WFRS T K VKWGGAKHH EDKD+ G+MHPRSSFKAFLE VK RSLPWE+ +
Sbjct: 507  ITSKDFLLWFRSHTAKEVKWGGAKHHPEDKDDGGRMHPRSSFKAFLEVVKSRSLPWEVSD 566

Query: 1081 MNAIHSLQLIMR-------GQSGTGMSIERQLMTER--VDELRSVASKMVNLIETAIVPV 1233
            +NAIHSLQLIMR         SG  M   ++  +E   ++EL SVA +MV LIETA  P+
Sbjct: 567  INAIHSLQLIMRDSFQDIEDSSGKVMVHTQKYDSEMQGLNELGSVACEMVKLIETATAPI 626

Query: 1234 IAVDSDGNVNGWNTKVAELTGLPDNGALGKSLINELVHEESRETVDNHLSRALQGEESKN 1413
              VDS G +NGWN K+AELTGL    A+GKSL++E+VHE+ R  VDN L RALQG+E KN
Sbjct: 627  FGVDSSGCINGWNAKIAELTGLQAKEAMGKSLVDEIVHEDLRGAVDNLLCRALQGKEDKN 686

Query: 1414 VQIKLRTFGSQQQNEAVYIVANACTTKNCTGNVIGVSFMGQDVTKEKALMDKFIRLQGDY 1593
            V++KL+ FG  QQ+ A+YIV NACT+++ T +++GV F+GQD+T EK +MDKFIRLQGDY
Sbjct: 687  VELKLKNFGLNQQDSALYIVVNACTSRDYTNDIVGVCFVGQDITSEKIVMDKFIRLQGDY 746

Query: 1594 KAIIQSLDPLIPPIFASDENACCCEWNTAMEKLTGWTKGEAIGKILAGEIFGKLCQLKDQ 1773
            KAI+Q L+PLIPPIFASD NACC EWNT++EKLTG  + E I K+L GE+FG LC LK Q
Sbjct: 747  KAIVQCLNPLIPPIFASDGNACCSEWNTSLEKLTGCMRHEVIRKMLPGEVFGGLCPLKSQ 806

Query: 1774 GAITEFMILLYQAICSHVTLKFPFAFFDKRGKYCKFVLTANKRVDMEGNIIGCFCFLQMA 1953
              +T F ILLYQAI    T KFPF FFDK GK  + +LTANKR D  GN+IGCFCFLQ+ 
Sbjct: 807  DTLTRFTILLYQAISGQDTEKFPFGFFDKSGKLVEVLLTANKRTDANGNVIGCFCFLQID 866

Query: 1954 VPNLIQDVQNQQE-RKCLARLKELAYIQEETKAPLGGVRFAHRLLESSSLSDQMKRLLKT 2130
             P+  Q + +  E R+C ++ KELAYI++E K PL G+RF H+LLE+++ S   K+ L+T
Sbjct: 867  TPDKHQGLGHGPEYRECFSKFKELAYIRQEMKNPLNGIRFTHKLLETTATSVYQKQFLET 926

Query: 2131 SDACEKQMVKIIEDCSLESIEKRSMELHKDWFSLGIAMDAIISQVMILLTEKKLQLNYEI 2310
            S+ACE+QM+ II D  +  IE+ SMEL+ + F LG  +DA++SQVM+LL EKKLQL  EI
Sbjct: 927  SEACERQMMSIIADIDMGIIEEGSMELNVEEFLLGNVLDAVVSQVMMLLKEKKLQLVCEI 986

Query: 2311 SEKTKVLSIYGDQIRXXXXXXXXXXXXXXXXSSSPEGWVNIEVELNSVLYQDSGPVLQLQ 2490
             E+ K L + GDQI+                 SS +GW+ I++     + QD    + LQ
Sbjct: 987  PEEIKTLPLSGDQIKLQQVLSDFLHNIVHHAPSS-DGWIEIKISTGLKMIQDFNEFVHLQ 1045

Query: 2491 FRLAHPGEGLPPELVQDMVSGGTLWSSPEGVGLSLSRKLLRMMNGQIRYIREPTKCFFLI 2670
            FR+ H G+GLPP+L+QDM  GG  W++ EG+GL+LSRKLL  MNG+++Y+RE  KC+FL+
Sbjct: 1046 FRMTHIGQGLPPDLIQDMFEGGDQWNTQEGLGLNLSRKLLSAMNGRVQYVREHGKCYFLV 1105

Query: 2671 HI 2676
             I
Sbjct: 1106 DI 1107