BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver29_contig00064494
         (519 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAD21687.1| Strong similarity to gi|3600044 T12H20.12 proteas...   106   3e-35
ref|XP_009623363.1| PREDICTED: uncharacterized protein LOC104114...   103   4e-35
gb|AAU43956.1| unknown protein [Oryza sativa Japonica Group] gi|...   111   4e-33
ref|XP_008374275.1| PREDICTED: retrovirus-related Pol polyprotei...   105   3e-32
gb|AFP55537.1| retrotransposon polyprotein [Rosa rugosa]              117   4e-32
emb|CAN59952.1| hypothetical protein VITISV_006720 [Vitis vinifera]   106   4e-32
gb|AAN06870.1| Putative gag-pol polyprotein [Oryza sativa Japoni...   110   6e-32
emb|CAN81355.1| hypothetical protein VITISV_039158 [Vitis vinifera]   105   7e-32
ref|XP_013658035.1| PREDICTED: uncharacterized protein LOC106362...    95   7e-32
gb|AAC61290.1| putative retroelement pol polyprotein [Arabidopsi...    95   2e-31
emb|CAB43904.1| putative protein [Arabidopsis thaliana] gi|72697...    97   8e-31
gb|AAF69172.1|AC007915_24 F27F5.11 [Arabidopsis thaliana]              97   8e-31
gb|ABA98286.2| retrotransposon protein, putative, Ty1-copia subc...   107   1e-30
gb|AAU90262.1| integrase core domain containing protein [Oryza s...   105   1e-30
emb|CAA19715.1| putative protein [Arabidopsis thaliana] gi|72695...    91   2e-30
gb|AAL66754.1|AF464738_5 putative copia-like retrotransposon Hop...   107   2e-30
gb|AAP94600.1| putative copia-like retrotransposon Hopscotch pol...   107   2e-30
gb|ABA98049.1| retrotransposon protein, putative, Ty1-copia subc...   105   3e-30
gb|AAK51235.1|AF287471_1 polyprotein [Arabidopsis thaliana]            94   3e-30
ref|XP_008367623.1| PREDICTED: uncharacterized protein LOC103431...   101   4e-30

>gb|AAD21687.1| Strong similarity to gi|3600044 T12H20.12 protease homolog from
           Arabidopsis thaliana BAC gb|AF080119 and is a member of
           the reverse transcriptase family PF|00078 [Arabidopsis
           thaliana]
          Length = 1415

 Score =  106 bits (264), Expect(2) = 3e-35
 Identities = 45/94 (47%), Positives = 63/94 (67%)
 Frame = +2

Query: 221 GKYFVLSSMLAKSLWFDSFMAATYLINRIPSKLLNYVSPFEVLFNKTPNYSFLKVFGCAC 400
           G   +  S   +  W +SF  A Y+INR+PS +L  +SP+E LF + P+YS L+VFG AC
Sbjct: 627 GLSMLFHSHTPQKFWVESFFTANYIINRLPSSVLKNLSPYEALFGEKPDYSSLRVFGSAC 686

Query: 401 YPYLGPYKKDKLSPKSTKCIFLGYNPLHKGYRCY 502
           YP L P  ++K  P+S +C+FLGYN  +KGYRC+
Sbjct: 687 YPCLRPLAQNKFDPRSLQCVFLGYNSQYKGYRCF 720



 Score = 68.9 bits (167), Expect(2) = 3e-35
 Identities = 35/81 (43%), Positives = 49/81 (60%)
 Frame = +3

Query: 3   TESLSCFKHFKIMNENLFSAKIKLFQ*DGSYELVKGMFKQYLDQEGITVSCSCPHISQQN 182
           +E LS F  F+ + EN  + KIK+FQ DG  E V    K +L + GI    SCP+  QQN
Sbjct: 554 SEFLSVFISFQKLVENQLNTKIKVFQSDGGGEFVSNKLKTHLSEHGIHHRISCPYTPQQN 613

Query: 183 ALAERKHQHIAFVGNTLSFQA 245
            LAERKH+H+  +G ++ F +
Sbjct: 614 GLAERKHRHLVELGLSMLFHS 634


>ref|XP_009623363.1| PREDICTED: uncharacterized protein LOC104114593 [Nicotiana
           tomentosiformis]
          Length = 717

 Score =  103 bits (258), Expect(2) = 4e-35
 Identities = 46/81 (56%), Positives = 56/81 (69%)
 Frame = +2

Query: 257 SLWFDSFMAATYLINRIPSKLLNYVSPFEVLFNKTPNYSFLKVFGCACYPYLGPYKKDKL 436
           SLW ++F+ A +LINR+PS  L  +SP+E LF   P+Y+ LK FGC CYP L PY   KL
Sbjct: 518 SLWVEAFLTAVHLINRLPSSSLAKLSPYENLFGVPPDYTILKPFGCLCYPNLRPYHSHKL 577

Query: 437 SPKSTKCIFLGYNPLHKGYRC 499
              S+ CIFLGYN  HKGYRC
Sbjct: 578 DSSSSPCIFLGYNSSHKGYRC 598



 Score = 71.2 bits (173), Expect(2) = 4e-35
 Identities = 35/81 (43%), Positives = 45/81 (55%)
 Frame = +3

Query: 3   TESLSCFKHFKIMNENLFSAKIKLFQ*DGSYELVKGMFKQYLDQEGITVSCSCPHISQQN 182
           ++++SCF HFK++ EN F   IK F+ DG  E     F  +L    I    SC H  QQN
Sbjct: 433 SDAISCFTHFKLLVENQFGGSIKTFRSDGEGEYQSSSFISFLRSHNIHHQLSCAHTPQQN 492

Query: 183 ALAERKHQHIAFVGNTLSFQA 245
            +AERKH HI  V  T+ F A
Sbjct: 493 GVAERKHCHITNVARTILFHA 513


>gb|AAU43956.1| unknown protein [Oryza sativa Japonica Group]
           gi|52353503|gb|AAU44069.1| putative polyprotein [Oryza
           sativa Japonica Group]
          Length = 1447

 Score =  111 bits (277), Expect(2) = 4e-33
 Identities = 48/90 (53%), Positives = 66/90 (73%)
 Frame = +2

Query: 242 SMLAKSLWFDSFMAATYLINRIPSKLLNYVSPFEVLFNKTPNYSFLKVFGCACYPYLGPY 421
           S +    W ++F AA YLINR P+KLL +++P E LFN+TP+YS L+VFGCAC+P+L PY
Sbjct: 634 SSMPLKFWDEAFQAAVYLINRTPTKLLQFLTPLEHLFNQTPDYSSLRVFGCACWPHLRPY 693

Query: 422 KKDKLSPKSTKCIFLGYNPLHKGYRCYENS 511
              KL  +S +C FLGY+ LHKG++C + S
Sbjct: 694 NTHKLQFRSKQCTFLGYSTLHKGFKCLDPS 723



 Score = 57.0 bits (136), Expect(2) = 4e-33
 Identities = 35/79 (44%), Positives = 43/79 (54%), Gaps = 2/79 (2%)
 Frame = +3

Query: 3   TESLSCFKHFKIMNENLFSAKIKLFQ*D--GSYELVKGMFKQYLDQEGITVSCSCPHISQ 176
           +E +  F  F+ + E LF+ KI   Q D  G YE +   F +     GIT   SCPH  Q
Sbjct: 556 SEVIQKFHEFQALVERLFNRKIIAMQSDWGGEYEKLHSFFTKI----GITHHVSCPHTHQ 611

Query: 177 QNALAERKHQHIAFVGNTL 233
           QN  AERKH+HI  VG TL
Sbjct: 612 QNGSAERKHRHIVEVGLTL 630


>ref|XP_008374275.1| PREDICTED: retrovirus-related Pol polyprotein from transposon TNT
           1-94 [Malus domestica]
          Length = 740

 Score =  105 bits (262), Expect(2) = 3e-32
 Identities = 45/85 (52%), Positives = 58/85 (68%)
 Frame = +2

Query: 248 LAKSLWFDSFMAATYLINRIPSKLLNYVSPFEVLFNKTPNYSFLKVFGCACYPYLGPYKK 427
           L+   WF +   +TYL+NR+P+ +L   SPFEVL+   P    L+VFGCACYP L PY+ 
Sbjct: 353 LSSKFWFHACATSTYLVNRLPTSVLKMHSPFEVLYKSPPTLDHLRVFGCACYPSLKPYRT 412

Query: 428 DKLSPKSTKCIFLGYNPLHKGYRCY 502
           +KL PK+T CIFLGY   +KGY CY
Sbjct: 413 NKLDPKTTMCIFLGYAAQYKGYICY 437



 Score = 60.1 bits (144), Expect(2) = 3e-32
 Identities = 32/81 (39%), Positives = 45/81 (55%)
 Frame = +3

Query: 21  FKHFKIMNENLFSAKIKLFQ*DGSYELVKGMFKQYLDQEGITVSCSCPHISQQNALAERK 200
           F  F    +N FSA +K+ Q DG  E V   F+ +L  +GI    SCP+  +QN LAERK
Sbjct: 277 FVQFHAYIQNYFSATVKVLQSDGGGEYVSTRFQNFLTTKGIVHXKSCPYTPEQNGLAERK 336

Query: 201 HQHIAFVGNTLSFQACLQSPY 263
           ++H+     TL  +A L S +
Sbjct: 337 NRHLVETAVTLLQKASLSSKF 357


>gb|AFP55537.1| retrotransposon polyprotein [Rosa rugosa]
          Length = 1384

 Score =  117 bits (293), Expect(2) = 4e-32
 Identities = 48/88 (54%), Positives = 65/88 (73%)
 Frame = +2

Query: 248 LAKSLWFDSFMAATYLINRIPSKLLNYVSPFEVLFNKTPNYSFLKVFGCACYPYLGPYKK 427
           +  + W DSF  A Y+INR+PS++LNY SP+E LF++ P Y  LKVFGCAC+PYL PY  
Sbjct: 580 MPSTYWVDSFNTAVYIINRLPSRVLNYASPYEQLFHRVPQYHSLKVFGCACFPYLRPYNS 639

Query: 428 DKLSPKSTKCIFLGYNPLHKGYRCYENS 511
            KL  +S +C+FLGY+  H+GYRC++ S
Sbjct: 640 SKLQLRSKRCVFLGYSLNHQGYRCFDPS 667



 Score = 47.4 bits (111), Expect(2) = 4e-32
 Identities = 26/58 (44%), Positives = 31/58 (53%)
 Frame = +3

Query: 90  SYELVKGMFKQYLDQEGITVSCSCPHISQQNALAERKHQHIAFVGNTLSFQACLQSPY 263
           S E    +F+ YL   GI    SCP   +QN LAERKH+HI   G TL   A + S Y
Sbjct: 527 SGEYKSHIFQSYLSTNGIFQRFSCPKHPEQNGLAERKHRHIVDTGLTLLAHAHMPSTY 584


>emb|CAN59952.1| hypothetical protein VITISV_006720 [Vitis vinifera]
          Length = 1365

 Score =  106 bits (264), Expect(2) = 4e-32
 Identities = 45/87 (51%), Positives = 59/87 (67%)
 Frame = +2

Query: 248 LAKSLWFDSFMAATYLINRIPSKLLNYVSPFEVLFNKTPNYSFLKVFGCACYPYLGPYKK 427
           L    W  +F  AT+LINR+PSK+L   SP+  LF + P+Y FL+VFGC CYP++ PY  
Sbjct: 613 LPLKFWSYAFQTATFLINRMPSKVLQNASPYFALFKRNPDYKFLRVFGCLCYPFIRPYNN 672

Query: 428 DKLSPKSTKCIFLGYNPLHKGYRCYEN 508
            KL  +S KC+FLGY+  HKGY C +N
Sbjct: 673 HKLQYRSLKCVFLGYSLHHKGYLCLDN 699



 Score = 58.5 bits (140), Expect(2) = 4e-32
 Identities = 34/82 (41%), Positives = 42/82 (51%)
 Frame = +3

Query: 6   ESLSCFKHFKIMNENLFSAKIKLFQ*DGSYELVKGMFKQYLDQEGITVSCSCPHISQQNA 185
           ++L  FK FK+  EN F AKIK  Q D   E     F  +L + GI    SCP+ S QN 
Sbjct: 534 QALPIFKQFKLQVENQFDAKIKCLQSDNGGEFRS--FMSFLQESGILHRFSCPYNSSQNG 591

Query: 186 LAERKHQHIAFVGNTLSFQACL 251
             ERKH+H+   G  L   A L
Sbjct: 592 RVERKHRHVVETGLALLAHAGL 613


>gb|AAN06870.1| Putative gag-pol polyprotein [Oryza sativa Japonica Group]
           gi|108706314|gb|ABF94109.1| retrotransposon protein,
           putative, Ty1-copia subclass [Oryza sativa Japonica
           Group]
          Length = 1247

 Score =  110 bits (276), Expect(2) = 6e-32
 Identities = 47/90 (52%), Positives = 65/90 (72%)
 Frame = +2

Query: 242 SMLAKSLWFDSFMAATYLINRIPSKLLNYVSPFEVLFNKTPNYSFLKVFGCACYPYLGPY 421
           S +    W ++F +A YLINR PS+LL Y +P E LF +TP+Y+ L+VFGCAC+P+L PY
Sbjct: 432 SSMPLKFWDEAFTSAVYLINRTPSRLLKYATPLERLFKQTPDYNLLRVFGCACWPHLRPY 491

Query: 422 KKDKLSPKSTKCIFLGYNPLHKGYRCYENS 511
              KL  +S +C FLGY+PLHKG++C + S
Sbjct: 492 NARKLQFRSKQCTFLGYSPLHKGFKCLDPS 521



 Score = 53.5 bits (127), Expect(2) = 6e-32
 Identities = 32/73 (43%), Positives = 39/73 (53%), Gaps = 2/73 (2%)
 Frame = +3

Query: 21  FKHFKIMNENLFSAKIKLFQ*D--GSYELVKGMFKQYLDQEGITVSCSCPHISQQNALAE 194
           F  F+ + E LF+ KI   Q D  G YE +   F +     GIT   SCPH  QQN  AE
Sbjct: 360 FHEFQALVERLFNRKILAMQSDWGGEYEKLNSFFTKI----GITHHVSCPHTHQQNGSAE 415

Query: 195 RKHQHIAFVGNTL 233
           RKH+HI  +G  L
Sbjct: 416 RKHRHIVEMGLAL 428


>emb|CAN81355.1| hypothetical protein VITISV_039158 [Vitis vinifera]
          Length = 1402

 Score =  105 bits (263), Expect(2) = 7e-32
 Identities = 45/87 (51%), Positives = 59/87 (67%)
 Frame = +2

Query: 248 LAKSLWFDSFMAATYLINRIPSKLLNYVSPFEVLFNKTPNYSFLKVFGCACYPYLGPYKK 427
           L    W  +F  AT+LINR+PSK+L   SP+  LF + P+Y FL+VFGC CYP++ PY  
Sbjct: 663 LPLKFWSYAFQTATFLINRMPSKVLXNASPYFALFKRNPDYKFLRVFGCLCYPFIRPYNN 722

Query: 428 DKLSPKSTKCIFLGYNPLHKGYRCYEN 508
            KL  +S KC+FLGY+  HKGY C +N
Sbjct: 723 HKLQYRSLKCVFLGYSLHHKGYLCLDN 749



 Score = 58.2 bits (139), Expect(2) = 7e-32
 Identities = 34/82 (41%), Positives = 42/82 (51%)
 Frame = +3

Query: 6   ESLSCFKHFKIMNENLFSAKIKLFQ*DGSYELVKGMFKQYLDQEGITVSCSCPHISQQNA 185
           ++L  FK FK+  EN F AKIK  Q D   E     F  +L + GI    SCP+ S QN 
Sbjct: 584 QALPIFKXFKLQVENQFEAKIKCLQXDNGGEFRS--FMSFLQESGILHRFSCPYNSSQNG 641

Query: 186 LAERKHQHIAFVGNTLSFQACL 251
             ERKH+H+   G  L   A L
Sbjct: 642 RVERKHRHVVETGLALLAHAGL 663


>ref|XP_013658035.1| PREDICTED: uncharacterized protein LOC106362726 [Brassica napus]
          Length = 1062

 Score = 95.1 bits (235), Expect(2) = 7e-32
 Identities = 43/94 (45%), Positives = 57/94 (60%), Gaps = 1/94 (1%)
 Frame = +2

Query: 221 GKYFVLSSMLAKSLWFDSFMAATYLINRIPSKLLNYVS-PFEVLFNKTPNYSFLKVFGCA 397
           G   +  + + +SLW ++   A +L N +P   L   S P+E L   TP+YS L+VFGC 
Sbjct: 550 GMSMMFEAKMPQSLWVEALFTANFLTNLLPHTALGKTSSPYEKLNGFTPHYSALRVFGCC 609

Query: 398 CYPYLGPYKKDKLSPKSTKCIFLGYNPLHKGYRC 499
           CYPYL PY ++K  PKS  C+FLGY    KGYRC
Sbjct: 610 CYPYLRPYSQNKFDPKSLLCVFLGYTEKQKGYRC 643



 Score = 68.9 bits (167), Expect(2) = 7e-32
 Identities = 33/81 (40%), Positives = 48/81 (59%)
 Frame = +3

Query: 3   TESLSCFKHFKIMNENLFSAKIKLFQ*DGSYELVKGMFKQYLDQEGITVSCSCPHISQQN 182
           +E  + FK F+ + EN F  KI++ Q DG  + V   F  +L   GI    SCPH  +QN
Sbjct: 477 SEVFATFKSFQCLVENQFERKIQILQTDGGGDFVNNQFASHLTNCGIKHYLSCPHTPEQN 536

Query: 183 ALAERKHQHIAFVGNTLSFQA 245
            LAERKH+H+  +G ++ F+A
Sbjct: 537 GLAERKHRHLVELGMSMMFEA 557



 Score = 80.9 bits (198), Expect = 3e-13
 Identities = 34/56 (60%), Positives = 40/56 (71%)
 Frame = +2

Query: 332 SPFEVLFNKTPNYSFLKVFGCACYPYLGPYKKDKLSPKSTKCIFLGYNPLHKGYRC 499
           SP+E L   TP+YS L+VFGC CYPYL PY ++K  PKS  C+FLGY    KGYRC
Sbjct: 774 SPYEKLNGFTPHYSALRVFGCCCYPYLRPYSQNKFDPKSLLCVFLGYTEKQKGYRC 829


>gb|AAC61290.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
          Length = 1149

 Score = 95.1 bits (235), Expect(2) = 2e-31
 Identities = 41/95 (43%), Positives = 60/95 (63%), Gaps = 1/95 (1%)
 Frame = +2

Query: 221 GKYFVLSSMLAKSLWFDSFMAATYLINRIPSKLLNY-VSPFEVLFNKTPNYSFLKVFGCA 397
           G   +  S   +  W ++F  A +L N +P+  L+   +P++VLF K P+YS L+ FGCA
Sbjct: 619 GLTLMFQSKAPQRFWVEAFFTANFLSNLLPTSALDSSTTPYQVLFGKAPDYSALRTFGCA 678

Query: 398 CYPYLGPYKKDKLSPKSTKCIFLGYNPLHKGYRCY 502
           C+P L  Y ++K  P+S KCIFLGY   +KGYRC+
Sbjct: 679 CFPTLRAYARNKFDPRSLKCIFLGYTEKYKGYRCF 713



 Score = 67.4 bits (163), Expect(2) = 2e-31
 Identities = 36/77 (46%), Positives = 42/77 (54%)
 Frame = +3

Query: 15  SCFKHFKIMNENLFSAKIKLFQ*DGSYELVKGMFKQYLDQEGITVSCSCPHISQQNALAE 194
           S F  F+   ENL   KI  FQ DG  E     F Q+L + GI    SCPH  QQN LAE
Sbjct: 550 SLFMKFQSFVENLLQTKIGTFQSDGGGEFTSNRFLQHLQESGIQHYISCPHTPQQNGLAE 609

Query: 195 RKHQHIAFVGNTLSFQA 245
           RKH+ +   G TL FQ+
Sbjct: 610 RKHRQLTERGLTLMFQS 626


>emb|CAB43904.1| putative protein [Arabidopsis thaliana] gi|7269745|emb|CAB81478.1|
           putative protein [Arabidopsis thaliana]
          Length = 1415

 Score = 96.7 bits (239), Expect(2) = 8e-31
 Identities = 42/95 (44%), Positives = 60/95 (63%), Gaps = 1/95 (1%)
 Frame = +2

Query: 221 GKYFVLSSMLAKSLWFDSFMAATYLINRIPSKLL-NYVSPFEVLFNKTPNYSFLKVFGCA 397
           G   +    + + LW ++F  + +L N +PS +L +  SP+EVL  K P Y+ L+VFGCA
Sbjct: 597 GSSMMFQGKVPQFLWVEAFYTSNFLCNLLPSSVLKDQKSPYEVLMGKAPVYTSLRVFGCA 656

Query: 398 CYPYLGPYKKDKLSPKSTKCIFLGYNPLHKGYRCY 502
           CYP L PY  +K  PKS  C+F GYN  +KGY+C+
Sbjct: 657 CYPNLRPYASNKFDPKSLLCVFTGYNEKYKGYKCF 691



 Score = 63.9 bits (154), Expect(2) = 8e-31
 Identities = 33/80 (41%), Positives = 46/80 (57%)
 Frame = +3

Query: 3   TESLSCFKHFKIMNENLFSAKIKLFQ*DGSYELVKGMFKQYLDQEGITVSCSCPHISQQN 182
           ++  S F  F+ M EN    KI  FQ DG  E +   F  +L + GI    SCP+  QQN
Sbjct: 524 SDFFSVFLTFQKMVENQCQQKIASFQCDGGGEFISNQFVSHLAECGIRQLISCPYTPQQN 583

Query: 183 ALAERKHQHIAFVGNTLSFQ 242
            +AERKH+HI  +G+++ FQ
Sbjct: 584 GIAERKHRHITELGSSMMFQ 603


>gb|AAF69172.1|AC007915_24 F27F5.11 [Arabidopsis thaliana]
          Length = 1313

 Score = 97.4 bits (241), Expect(2) = 8e-31
 Identities = 44/95 (46%), Positives = 60/95 (63%), Gaps = 1/95 (1%)
 Frame = +2

Query: 221 GKYFVLSSMLAKSLWFDSFMAATYLINRIPSKLLNY-VSPFEVLFNKTPNYSFLKVFGCA 397
           G   +  S   +  W ++F  A++LIN +P+  L+   SP+E L  K P YS L+VFGCA
Sbjct: 574 GLSMMFQSTRPQKFWVEAFYTASFLINLLPTTALDEKYSPYEKLHGKPPEYSALRVFGCA 633

Query: 398 CYPYLGPYKKDKLSPKSTKCIFLGYNPLHKGYRCY 502
           CYP L  Y  +K  P+S KC+FLGYN  +KGYRC+
Sbjct: 634 CYPTLRDYASNKFDPRSLKCVFLGYNDKYKGYRCF 668



 Score = 63.2 bits (152), Expect(2) = 8e-31
 Identities = 34/75 (45%), Positives = 43/75 (57%)
 Frame = +3

Query: 21  FKHFKIMNENLFSAKIKLFQ*DGSYELVKGMFKQYLDQEGITVSCSCPHISQQNALAERK 200
           F  F+ M EN +  KI  FQ DG  E        +L Q GI    SCP+ SQQN LAERK
Sbjct: 507 FTVFQDMVENQYQTKIGSFQCDGGGEFTSRKLTDHLQQCGIKQLISCPYTSQQNGLAERK 566

Query: 201 HQHIAFVGNTLSFQA 245
           H+HI  +G ++ FQ+
Sbjct: 567 HRHIIELGLSMMFQS 581


>gb|ABA98286.2| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
           Japonica Group]
          Length = 1478

 Score =  107 bits (266), Expect(2) = 1e-30
 Identities = 43/83 (51%), Positives = 64/83 (77%)
 Frame = +2

Query: 263 WFDSFMAATYLINRIPSKLLNYVSPFEVLFNKTPNYSFLKVFGCACYPYLGPYKKDKLSP 442
           W ++F AATYLINR+PS++++ +SP E LF + P+YS L++FGCAC+P L PY   KL  
Sbjct: 668 WDEAFQAATYLINRVPSRVIHNISPLEKLFKQKPDYSSLRIFGCACWPNLRPYNNHKLQF 727

Query: 443 KSTKCIFLGYNPLHKGYRCYENS 511
           +S +C+FLG++ +HKG++C E S
Sbjct: 728 RSKRCVFLGFSTMHKGFKCLEVS 750



 Score = 53.1 bits (126), Expect(2) = 1e-30
 Identities = 31/79 (39%), Positives = 41/79 (51%), Gaps = 2/79 (2%)
 Frame = +3

Query: 21  FKHFKIMNENLFSAKIKLFQ*D--GSYELVKGMFKQYLDQEGITVSCSCPHISQQNALAE 194
           F+ F++M E  F  KI   Q D  G Y+ +   F +     GI    SCPH  QQN  AE
Sbjct: 589 FQEFQVMVERQFDRKILAMQTDWGGEYQSLNSFFSKI----GIVHHVSCPHTHQQNGSAE 644

Query: 195 RKHQHIAFVGNTLSFQACL 251
           RKH+HI  +G +L   A +
Sbjct: 645 RKHRHIVEIGLSLLSHASM 663


>gb|AAU90262.1| integrase core domain containing protein [Oryza sativa Japonica
           Group] gi|108710062|gb|ABF97857.1| retrotransposon
           protein, putative, Ty1-copia subclass, expressed [Oryza
           sativa Japonica Group]
          Length = 1021

 Score =  105 bits (261), Expect(2) = 1e-30
 Identities = 43/81 (53%), Positives = 60/81 (74%)
 Frame = +2

Query: 263 WFDSFMAATYLINRIPSKLLNYVSPFEVLFNKTPNYSFLKVFGCACYPYLGPYKKDKLSP 442
           W ++F+ ATYLINR PSK++ Y +P E L N+ PNYS L+ FGCAC+P L PY   KL  
Sbjct: 556 WDEAFLTATYLINRTPSKVIQYSTPLERLLNQKPNYSSLRTFGCACWPNLRPYNNRKLQF 615

Query: 443 KSTKCIFLGYNPLHKGYRCYE 505
           +S +C+FLGY+ +HKG++C +
Sbjct: 616 RSKQCVFLGYSNIHKGFKCLD 636



 Score = 54.7 bits (130), Expect(2) = 1e-30
 Identities = 35/85 (41%), Positives = 46/85 (54%), Gaps = 2/85 (2%)
 Frame = +3

Query: 3   TESLSCFKHFKIMNENLFSAKIKLFQ*D--GSYELVKGMFKQYLDQEGITVSCSCPHISQ 176
           +E L  F  F+ + E LF+ KI   Q D  G YE +  +F +     GIT   SCP+  Q
Sbjct: 471 SEVLQKFSEFQQLVERLFNRKIIAMQSDWGGEYEKLNAIFTKI----GITHHVSCPYAHQ 526

Query: 177 QNALAERKHQHIAFVGNTLSFQACL 251
           QN  AERKH+HI  VG +L   A +
Sbjct: 527 QNGSAERKHRHIVEVGLSLLAHASM 551


>emb|CAA19715.1| putative protein [Arabidopsis thaliana] gi|7269574|emb|CAB79576.1|
           putative protein [Arabidopsis thaliana]
          Length = 1318

 Score = 90.5 bits (223), Expect(2) = 2e-30
 Identities = 41/94 (43%), Positives = 60/94 (63%), Gaps = 1/94 (1%)
 Frame = +2

Query: 221 GKYFVLSSMLAKSLWFDSFMAATYLINRIP-SKLLNYVSPFEVLFNKTPNYSFLKVFGCA 397
           G   +  S +    W ++F  A +LIN +P S L   +SP+E L++K P+Y+ L+ FG A
Sbjct: 442 GLSMLFQSHVPHKFWVEAFFTANFLINLLPTSALKESISPYEKLYDKKPDYTSLRSFGSA 501

Query: 398 CYPYLGPYKKDKLSPKSTKCIFLGYNPLHKGYRC 499
           C+P L  Y ++K +P S KC+FLGYN  +KGYRC
Sbjct: 502 CFPTLRDYAENKFNPCSLKCVFLGYNEKYKGYRC 535



 Score = 68.6 bits (166), Expect(2) = 2e-30
 Identities = 35/75 (46%), Positives = 44/75 (58%)
 Frame = +3

Query: 21  FKHFKIMNENLFSAKIKLFQ*DGSYELVKGMFKQYLDQEGITVSCSCPHISQQNALAERK 200
           F  F  + EN  S KI +FQ DG  E V   F Q+L   GI    SCPH  QQN LAERK
Sbjct: 375 FLAFHKLVENQLSQKISVFQCDGGGEFVSHKFLQHLQSHGIQQQLSCPHTPQQNGLAERK 434

Query: 201 HQHIAFVGNTLSFQA 245
           H+H+  +G ++ FQ+
Sbjct: 435 HRHLVELGLSMLFQS 449


>gb|AAL66754.1|AF464738_5 putative copia-like retrotransposon Hopscotch polyprotein [Zea
           mays]
          Length = 1313

 Score =  107 bits (268), Expect(2) = 2e-30
 Identities = 45/83 (54%), Positives = 63/83 (75%)
 Frame = +2

Query: 263 WFDSFMAATYLINRIPSKLLNYVSPFEVLFNKTPNYSFLKVFGCACYPYLGPYKKDKLSP 442
           W ++F+AA YLINR P+K+LN  +PFE LF+K P+YS L++FGC C+P L PY   KL  
Sbjct: 488 WDEAFLAAAYLINRTPTKILNLDTPFERLFHKQPDYSVLRIFGCVCWPNLRPYNSHKLQF 547

Query: 443 KSTKCIFLGYNPLHKGYRCYENS 511
           +S +C+FLGY+ LHKG++C + S
Sbjct: 548 RSKQCVFLGYSSLHKGFKCLDVS 570



 Score = 51.2 bits (121), Expect(2) = 2e-30
 Identities = 33/85 (38%), Positives = 43/85 (50%), Gaps = 2/85 (2%)
 Frame = +3

Query: 3   TESLSCFKHFKIMNENLFSAKIKLFQ*D--GSYELVKGMFKQYLDQEGITVSCSCPHISQ 176
           +E    F  F+ + E LF  KI   Q D  G Y+ +   F +     GI+   SCPH  Q
Sbjct: 403 SEVFQKFHEFQSLVERLFDRKILAVQTDWGGEYQRLNTFFNKI----GISHLVSCPHAHQ 458

Query: 177 QNALAERKHQHIAFVGNTLSFQACL 251
           QN  AERKH+HI  VG +L   A +
Sbjct: 459 QNGSAERKHRHIVEVGLSLLAHASM 483


>gb|AAP94600.1| putative copia-like retrotransposon Hopscotch polyprotein, partial
           [Zea mays]
          Length = 969

 Score =  107 bits (268), Expect(2) = 2e-30
 Identities = 45/83 (54%), Positives = 63/83 (75%)
 Frame = +2

Query: 263 WFDSFMAATYLINRIPSKLLNYVSPFEVLFNKTPNYSFLKVFGCACYPYLGPYKKDKLSP 442
           W ++F+AA YLINR P+K+LN  +PFE LF+K P+YS L++FGC C+P L PY   KL  
Sbjct: 488 WDEAFLAAAYLINRTPTKILNLDTPFERLFHKQPDYSVLRIFGCVCWPNLRPYNSHKLQF 547

Query: 443 KSTKCIFLGYNPLHKGYRCYENS 511
           +S +C+FLGY+ LHKG++C + S
Sbjct: 548 RSKQCVFLGYSSLHKGFKCLDVS 570



 Score = 51.2 bits (121), Expect(2) = 2e-30
 Identities = 33/85 (38%), Positives = 43/85 (50%), Gaps = 2/85 (2%)
 Frame = +3

Query: 3   TESLSCFKHFKIMNENLFSAKIKLFQ*D--GSYELVKGMFKQYLDQEGITVSCSCPHISQ 176
           +E    F  F+ + E LF  KI   Q D  G Y+ +   F +     GI+   SCPH  Q
Sbjct: 403 SEVFQKFHEFQSLVERLFDRKILAVQTDWGGEYQRLNTFFNKI----GISHLVSCPHAHQ 458

Query: 177 QNALAERKHQHIAFVGNTLSFQACL 251
           QN  AERKH+HI  VG +L   A +
Sbjct: 459 QNGSAERKHRHIVEVGLSLLAHASM 483


>gb|ABA98049.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
           Japonica Group]
          Length = 1460

 Score =  105 bits (262), Expect(2) = 3e-30
 Identities = 42/83 (50%), Positives = 63/83 (75%)
 Frame = +2

Query: 263 WFDSFMAATYLINRIPSKLLNYVSPFEVLFNKTPNYSFLKVFGCACYPYLGPYKKDKLSP 442
           W ++F  ATYLINR+PS++++ +SP E LF + P+YS L++FGCAC+P L PY   KL  
Sbjct: 635 WDEAFQVATYLINRVPSRVIHNISPLEKLFKQKPDYSSLRIFGCACWPNLRPYNNHKLQF 694

Query: 443 KSTKCIFLGYNPLHKGYRCYENS 511
           +S +C+FLG++ +HKG++C E S
Sbjct: 695 RSKRCVFLGFSTMHKGFKCLEVS 717



 Score = 53.1 bits (126), Expect(2) = 3e-30
 Identities = 31/79 (39%), Positives = 41/79 (51%), Gaps = 2/79 (2%)
 Frame = +3

Query: 21  FKHFKIMNENLFSAKIKLFQ*D--GSYELVKGMFKQYLDQEGITVSCSCPHISQQNALAE 194
           F+ F++M E  F  KI   Q D  G Y+ +   F +     GI    SCPH  QQN  AE
Sbjct: 556 FQEFQVMVERQFDRKILAMQTDWGGEYQSLNSFFSKI----GIVHHVSCPHTHQQNGSAE 611

Query: 195 RKHQHIAFVGNTLSFQACL 251
           RKH+HI  +G +L   A +
Sbjct: 612 RKHRHIVEIGLSLLSHASM 630


>gb|AAK51235.1|AF287471_1 polyprotein [Arabidopsis thaliana]
          Length = 1453

 Score = 94.4 bits (233), Expect(2) = 3e-30
 Identities = 40/79 (50%), Positives = 53/79 (67%)
 Frame = +2

Query: 263 WFDSFMAATYLINRIPSKLLNYVSPFEVLFNKTPNYSFLKVFGCACYPYLGPYKKDKLSP 442
           W ++F  A++L N +PS  L  VSP E L  + PNY+ L+VFG ACYP L P  + K  P
Sbjct: 644 WVEAFFTASFLSNMLPSPSLGNVSPLEALLKQKPNYAMLRVFGTACYPCLRPLGEHKFEP 703

Query: 443 KSTKCIFLGYNPLHKGYRC 499
           +S +C+FLGYN  +KGYRC
Sbjct: 704 RSLQCVFLGYNSQYKGYRC 722



 Score = 64.3 bits (155), Expect(2) = 3e-30
 Identities = 31/81 (38%), Positives = 48/81 (59%)
 Frame = +3

Query: 3   TESLSCFKHFKIMNENLFSAKIKLFQ*DGSYELVKGMFKQYLDQEGITVSCSCPHISQQN 182
           ++  + F  F+ + EN F+ KIK+FQ DG  E    + K++L   GI    SCP+  QQN
Sbjct: 557 SDFFAVFVAFQNLVENQFNTKIKVFQSDGGGEFTSNLMKKHLTDCGIQHRISCPYTPQQN 616

Query: 183 ALAERKHQHIAFVGNTLSFQA 245
            +AERKH+H   +G ++ F +
Sbjct: 617 GIAERKHRHFVELGLSMMFHS 637


>ref|XP_008367623.1| PREDICTED: uncharacterized protein LOC103431265 [Malus domestica]
          Length = 1110

 Score =  101 bits (252), Expect(2) = 4e-30
 Identities = 44/81 (54%), Positives = 58/81 (71%)
 Frame = +2

Query: 263  WFDSFMAATYLINRIPSKLLNYVSPFEVLFNKTPNYSFLKVFGCACYPYLGPYKKDKLSP 442
            W ++F  A YLINR+P+   +  SP+E L+++ PNY  LKVFGCAC+P+L PY   KL P
Sbjct: 889  WVEAFNTAIYLINRLPTA--SRQSPWESLYHRAPNYDLLKVFGCACFPWLKPYTSSKLDP 946

Query: 443  KSTKCIFLGYNPLHKGYRCYE 505
            KS  C+FLGY+  HKGYRC +
Sbjct: 947  KSRACVFLGYSLNHKGYRCLD 967



 Score = 56.6 bits (135), Expect(2) = 4e-30
 Identities = 28/77 (36%), Positives = 39/77 (50%)
 Frame = +3

Query: 3    TESLSCFKHFKIMNENLFSAKIKLFQ*DGSYELVKGMFKQYLDQEGITVSCSCPHISQQN 182
            ++ LS F  +K + EN    KI   + D   E +   F Q+L   GI    +CPH  +QN
Sbjct: 802  SDVLSTFMEYKSLVENSLCTKIXTLRSDSGXEYLSTSFSQFLATHGIHHQLTCPHTPEQN 861

Query: 183  ALAERKHQHIAFVGNTL 233
              AERKH+H+     TL
Sbjct: 862  GCAERKHRHLVETARTL 878