BLASTX nr result

ID: Papaver29_contig00064188 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver29_contig00064188
         (763 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_010259704.1| PREDICTED: pentatricopeptide repeat-containi...    44   1e-05

>ref|XP_010259704.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g66520-like [Nelumbo nucifera]
          Length = 505

 Score = 43.5 bits (101), Expect(3) = 1e-05
 Identities = 26/67 (38%), Positives = 38/67 (56%), Gaps = 10/67 (14%)
 Frame = -2

Query: 459 VSMIRLWRE-QPWN---------KELSSRNSPGCSSIEVNGIS*EFVGRDKSCLTALQIS 310
           +S++ L+RE + W+         KE+  + SPGCS IEVNG   EFV  DKS    LQ+ 
Sbjct: 428 LSLLSLYREAERWDDVENVKREMKEVGCKKSPGCSLIEVNGDCHEFVAGDKSHPCVLQVC 487

Query: 309 LQIDKSI 289
           L + + +
Sbjct: 488 LNLSQLV 494



 Score = 28.5 bits (62), Expect(3) = 1e-05
 Identities = 11/20 (55%), Positives = 14/20 (70%)
 Frame = -1

Query: 553 QFMNNMSSETNVAMWGVLLN 494
           QF+ +M  E N A+WG LLN
Sbjct: 379 QFIRDMPVEANAAIWGALLN 398



 Score = 24.3 bits (51), Expect(3) = 1e-05
 Identities = 10/19 (52%), Positives = 11/19 (57%)
 Frame = -3

Query: 509 GCTFKHCVDHKNAEVGELA 453
           G     C  HKN +VGELA
Sbjct: 394 GALLNACKVHKNVDVGELA 412


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