BLASTX nr result

ID: Papaver29_contig00064016 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver29_contig00064016
         (926 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CDP19876.1| unnamed protein product [Coffea canephora]             43   7e-07
ref|XP_009596044.1| PREDICTED: probable E3 ubiquitin-protein lig...    40   1e-05

>emb|CDP19876.1| unnamed protein product [Coffea canephora]
          Length = 297

 Score = 43.1 bits (100), Expect(2) = 7e-07
 Identities = 19/27 (70%), Positives = 22/27 (81%)
 Frame = -1

Query: 386 KGLIKMEIDEKNRDSHSVSFTFDALVD 306
           K  IK+E+DE NRD H VSFTFDA+VD
Sbjct: 63  KDTIKLEVDEGNRDCHLVSFTFDAMVD 89



 Score = 38.5 bits (88), Expect(2) = 7e-07
 Identities = 26/59 (44%), Positives = 27/59 (45%), Gaps = 7/59 (11%)
 Frame = -3

Query: 540 NYHQPYLVNEGNGRNGFRXXXXXXXXXXXXXXXP-------YLDHQMAKKIKNDVNV*K 385
           NYH PY V  G G   FR               P       Y+DHQ AKKIKNDVNV K
Sbjct: 6   NYHNPYYVG-GQGSGWFRPPQAAMLLAPSPHLQPPPPAPVPYVDHQSAKKIKNDVNVHK 63


>ref|XP_009596044.1| PREDICTED: probable E3 ubiquitin-protein ligase LUL4, partial
           [Nicotiana tomentosiformis]
          Length = 330

 Score = 40.4 bits (93), Expect(2) = 1e-05
 Identities = 17/27 (62%), Positives = 23/27 (85%)
 Frame = -1

Query: 386 KGLIKMEIDEKNRDSHSVSFTFDALVD 306
           K  I++++DE N+DSH V+FTFDALVD
Sbjct: 95  KDTIRIQLDELNKDSHLVTFTFDALVD 121



 Score = 37.4 bits (85), Expect(2) = 1e-05
 Identities = 24/53 (45%), Positives = 27/53 (50%), Gaps = 1/53 (1%)
 Frame = -3

Query: 540 NYHQPYLVNEGN-GRNGFRXXXXXXXXXXXXXXXPYLDHQMAKKIKNDVNV*K 385
           N++ PY    GN G  GFR                Y+DHQ AKKIKNDVNV K
Sbjct: 49  NHYPPYYHPHGNNGWGGFRPPPAPLPVVP------YVDHQNAKKIKNDVNVHK 95


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