BLASTX nr result

ID: Papaver29_contig00063463 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver29_contig00063463
         (565 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002308787.1| hypothetical protein POPTR_0006s01360g [Popu...    61   3e-07
ref|XP_011002219.1| PREDICTED: F-box protein CPR30-like [Populus...    58   3e-06

>ref|XP_002308787.1| hypothetical protein POPTR_0006s01360g [Populus trichocarpa]
           gi|222854763|gb|EEE92310.1| hypothetical protein
           POPTR_0006s01360g [Populus trichocarpa]
          Length = 396

 Score = 61.2 bits (147), Expect = 3e-07
 Identities = 49/166 (29%), Positives = 75/166 (45%), Gaps = 6/166 (3%)
 Frame = -1

Query: 553 NGTLSWIA----DKGGFEVIVSFDFQKKEFKETSLPYLLDENYGTTLCVLEESLC-LFGF 389
           NG L W+     +     ++V+ D   ++++E   P   D+N+   L VL   LC L  F
Sbjct: 211 NGALHWVVGENPESNVANIVVALDLGVEDYREVLQPEYKDKNFYIDLGVLRGCLCFLANF 270

Query: 388 NHFAAEAFELEGKGKTISSTKLFTFDVANHFGFVRTLMPLQYFGSG-EVLLSIDKYDGSV 212
                + + ++  G   S TKLF+       GF+R+L PL Y  SG EVL+  D  D   
Sbjct: 271 LGERVDVWMMKEYGVKESWTKLFSVAQYEVIGFLRSLKPLAYSKSGDEVLIEHDNLD--- 327

Query: 211 IVLYDQLYNTVKTLYDYEYLEPGPGWSFHTSIFIKSQVSLGTGTHI 74
           +  YD     VK         PG  +SF    F++S +S+    H+
Sbjct: 328 LCWYDLKRKQVKNRI------PGIPYSFEADTFVESLISVSPNRHL 367


>ref|XP_011002219.1| PREDICTED: F-box protein CPR30-like [Populus euphratica]
          Length = 396

 Score = 58.2 bits (139), Expect = 3e-06
 Identities = 48/166 (28%), Positives = 74/166 (44%), Gaps = 6/166 (3%)
 Frame = -1

Query: 553 NGTLSWIA----DKGGFEVIVSFDFQKKEFKETSLPYLLDENYGTTLCVLEESLC-LFGF 389
           NG L W+     +     ++V+ D   ++++E   P   D+N+   L VL   LC L  F
Sbjct: 211 NGALHWVVGENPESNVANIVVALDLGVEDYREVLQPEYKDKNFYIDLGVLRGCLCFLANF 270

Query: 388 NHFAAEAFELEGKGKTISSTKLFTFDVANHFGFVRTLMPLQYFGSG-EVLLSIDKYDGSV 212
                + + ++  G   S TKLF+       GF+R+L PL Y  SG EVL+  D  D   
Sbjct: 271 LGERVDVWMMKEYGVKESWTKLFSVAQYEVIGFLRSLKPLAYSKSGDEVLIEHDNLD--- 327

Query: 211 IVLYDQLYNTVKTLYDYEYLEPGPGWSFHTSIFIKSQVSLGTGTHI 74
           +  YD     VK         PG  +SF     ++S +S+    H+
Sbjct: 328 LCWYDLKRKQVKNRI------PGIPYSFEADTSVESLISVNPNRHL 367


Top