BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver29_contig00063275
         (613 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_008389974.1| PREDICTED: putative ribonuclease H protein A...    51   2e-07
ref|XP_008377870.1| PREDICTED: putative ribonuclease H protein A...    49   5e-07
ref|XP_008385092.1| PREDICTED: putative ribonuclease H protein A...    51   3e-06

>ref|XP_008389974.1| PREDICTED: putative ribonuclease H protein At1g65750 [Malus
           domestica]
          Length = 805

 Score = 50.8 bits (120), Expect(2) = 2e-07
 Identities = 49/166 (29%), Positives = 65/166 (39%), Gaps = 28/166 (16%)
 Frame = -3

Query: 419 LNGDCDKRFWVGNLQGFLIVSAAYHKVRVKLPSCS*Y*KIWTKCIHPSTASNVWKIEKFV 240
           ++ D D   W  +  G    S  Y  VR + P  S    IW   I P  +  VWKI  F 
Sbjct: 421 IDEDKDVLIWEASSSGGFSFSDGYEIVRHRFPVKSWASIIWRPFIPPRYSILVWKI-LFN 479

Query: 239 HLMT---ILRKGFKLAS*CCLCKKELESMK-------------RQDAIFFAVVLS----- 123
            L T   + R+G  LA  C LC K  ES+              R  A  F  ++      
Sbjct: 480 KLPTEDQLQRRGIPLAPXCQLCHKNSESIDHLFSSCDFAQCAWRWLATQFGTIIQPTGSL 539

Query: 122 -------ISSYKSPICKEVWLIAAFSLMNELWFLRNKFILENARPS 6
                  +S   SP  + VWL + F L+  +W +RNK   E   PS
Sbjct: 540 SDLWLDFLSKRFSPHLRNVWLASGFFLLMAIWKMRNKVKFEGKPPS 585



 Score = 31.2 bits (69), Expect(2) = 2e-07
 Identities = 16/49 (32%), Positives = 24/49 (48%), Gaps = 13/49 (26%)
 Frame = -1

Query: 568 VGDGSQVSVWNDCWIFDTNLDM-------------KVQSLIQNGQWCIP 461
           +G+GS  S+W D W+    +D+             KV ++I  GQW IP
Sbjct: 352 IGNGSTTSLWVDKWLDKPIVDVVGATEIAPSLSRTKVSNIIXMGQWVIP 400


>ref|XP_008377870.1| PREDICTED: putative ribonuclease H protein At1g65750 [Malus
           domestica]
          Length = 591

 Score = 48.9 bits (115), Expect(2) = 5e-07
 Identities = 48/166 (28%), Positives = 64/166 (38%), Gaps = 28/166 (16%)
 Frame = -3

Query: 419 LNGDCDKRFWVGNLQGFLIVSAAYHKVRVKLPSCS*Y*KIWTKCIHPSTASNVWKIEKFV 240
           ++ D D   W  +  G    S  Y  VR + P  S    IW   I P  +  VW I  F 
Sbjct: 207 IDEDKDVLIWEASTSGGFSFSDGYEIVRHRFPVKSWASIIWRPFIPPRYSILVWXI-LFN 265

Query: 239 HLMT---ILRKGFKLAS*CCLCKKELESMK-------------RQDAIFFAVVLS----- 123
            L T   + R+G  LA  C LC K  ES+              R  A  F  ++      
Sbjct: 266 KLPTEDQLQRRGIPLAPICQLCHKNSESIDHLFSSCDFAQCAWRWLATQFGTIIQPMGSL 325

Query: 122 -------ISSYKSPICKEVWLIAAFSLMNELWFLRNKFILENARPS 6
                  +S   SP  + VWL + F L+  +W +RNK   E   PS
Sbjct: 326 SDLWLDFLSKRFSPHLRNVWLASGFFLLMAIWKMRNKVKFEGKPPS 371



 Score = 32.0 bits (71), Expect(2) = 5e-07
 Identities = 16/49 (32%), Positives = 25/49 (51%), Gaps = 13/49 (26%)
 Frame = -1

Query: 568 VGDGSQVSVWNDCWIFDTNLDM-------------KVQSLIQNGQWCIP 461
           +G+GS  S+W D W+    +D+             KV ++I+ GQW IP
Sbjct: 138 IGNGSTTSLWVDKWLDKPIVDVVGATEIAPSLSRTKVSNIIRMGQWVIP 186


>ref|XP_008385092.1| PREDICTED: putative ribonuclease H protein At1g65750 [Malus
           domestica]
          Length = 715

 Score = 51.2 bits (121), Expect(2) = 3e-06
 Identities = 46/165 (27%), Positives = 63/165 (38%), Gaps = 27/165 (16%)
 Frame = -3

Query: 419 LNGDCDKRFWVGNLQGFLIVSAAYHKVRVKLPSCS*Y*KIWTKCIHPSTASNVWKI--EK 246
           ++ D D   W  +  G    S  Y  VR + P  S    IW   I P  +  VWKI   K
Sbjct: 331 IDEDKDVLIWEVSTSGVFSFSDGYEIVRHRFPVKSWASXIWRPFIPPRYSILVWKILFNK 390

Query: 245 FVHLMTILRKGFKLAS*CCLCKKELESMK-------------RQDAIFFAVVLS------ 123
                 + R+G  LA  C LC K  ES+              R  A  F  ++       
Sbjct: 391 LPTEDQLQRRGIPLAPICQLCHKNSESIDHLFSXCEFAQCAWRWLATQFGTIIPPTGSLS 450

Query: 122 ------ISSYKSPICKEVWLIAAFSLMNELWFLRNKFILENARPS 6
                 +S   SP  + VW+ + F L+  +W +RNK   E   PS
Sbjct: 451 DLWLXFLSKXFSPHLRNVWJASGFFLLMAIWKMRNKVKFEGKPPS 495



 Score = 26.9 bits (58), Expect(2) = 3e-06
 Identities = 14/49 (28%), Positives = 23/49 (46%), Gaps = 13/49 (26%)
 Frame = -1

Query: 568 VGDGSQVSVWNDCWIFDTNLDM-------------KVQSLIQNGQWCIP 461
           +G+GS  S+W D W+     D+             KV ++I+  +W IP
Sbjct: 262 IGNGSTTSLWVDKWLDKPIXDVVGATEIAXSLSRTKVSNIIRMXKWVIP 310