BLASTX nr result

ID: Papaver29_contig00063115 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver29_contig00063115
         (623 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_010273797.1| PREDICTED: RING-H2 finger protein ATL3 [Nelu...    71   6e-10
ref|XP_008340152.1| PREDICTED: RING-H2 finger protein ATL3-like ...    63   2e-07

>ref|XP_010273797.1| PREDICTED: RING-H2 finger protein ATL3 [Nelumbo nucifera]
          Length = 300

 Score = 70.9 bits (172), Expect = 6e-10
 Identities = 44/121 (36%), Positives = 65/121 (53%), Gaps = 1/121 (0%)
 Frame = -1

Query: 623 NNGLLSVEANPSYPTNVMFWGNQTRVXXXXXXXXXXXXXXXXXXXXXXXXXXLVIDIPDR 444
           N+G   +  +P++PTN++FWGNQT+V                           VI+IP R
Sbjct: 172 NSGSGYLTESPNFPTNILFWGNQTQVSTGGSGTEGPSSLSPSVPNSGRGGAL-VIEIPRR 230

Query: 443 LSHGXXXXXXXXXXXSAGRRVSENDMKSPVSSRFKSLCKLLSREKRVVPSSP-SVDIEQG 267
           L+ G            +  R SE + +SP+++R +SL +LLSR+KRV+P  P SVD+EQG
Sbjct: 231 LTEGFSSVSPSP----STNRFSEEETRSPMTTRLRSLKRLLSRDKRVLPCGPHSVDLEQG 286

Query: 266 E 264
           E
Sbjct: 287 E 287


>ref|XP_008340152.1| PREDICTED: RING-H2 finger protein ATL3-like [Malus domestica]
          Length = 319

 Score = 62.8 bits (151), Expect = 2e-07
 Identities = 46/124 (37%), Positives = 59/124 (47%), Gaps = 10/124 (8%)
 Frame = -1

Query: 608 SVEANPSYPTNVMFWGNQTRVXXXXXXXXXXXXXXXXXXXXXXXXXXL--------VIDI 453
           S+EA P +PTNV+FWGNQ+RV                                   VIDI
Sbjct: 189 SIEA-PIFPTNVLFWGNQSRVSSGPGAGLEEEGPSSPPSPSPSSLSSASNRPDGMLVIDI 247

Query: 452 PDRL-SHGXXXXXXXXXXXSAGRRVSENDMKSPVSSRFKSLCKLLSREKRVVPSSP-SVD 279
           P    S             S+ R   E D+KSPV +R +SL +LLSR++R+ P SP SVD
Sbjct: 248 PSETPSASPSPSPSPSPSPSSNRFAGEEDLKSPVPTRLRSLKRLLSRDRRISPCSPCSVD 307

Query: 278 IEQG 267
           +EQG
Sbjct: 308 VEQG 311


Top