BLASTX nr result
ID: Papaver29_contig00062437
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Papaver29_contig00062437
(463 letters)
Database: ./nr
77,306,371 sequences; 28,104,191,420 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_009118883.1| PREDICTED: uncharacterized protein LOC103843... 59 8e-16
ref|XP_013669013.1| PREDICTED: uncharacterized protein LOC106373... 64 1e-14
ref|XP_013713678.1| PREDICTED: uncharacterized protein LOC106417... 59 3e-13
ref|XP_013674083.1| PREDICTED: uncharacterized protein LOC106378... 58 5e-13
ref|XP_009124790.1| PREDICTED: LOW QUALITY PROTEIN: uncharacteri... 58 4e-12
gb|AAC28197.1| contains similarity to reverse transcriptases [Ar... 51 4e-11
ref|XP_013624887.1| PREDICTED: uncharacterized protein LOC106331... 49 6e-11
ref|XP_010451517.1| PREDICTED: uncharacterized protein LOC104733... 54 1e-10
ref|XP_009113016.1| PREDICTED: uncharacterized protein LOC103838... 55 2e-10
ref|XP_009135908.1| PREDICTED: uncharacterized protein LOC103860... 51 2e-10
ref|XP_009129032.1| PREDICTED: uncharacterized protein LOC103853... 51 2e-10
ref|XP_010445339.1| PREDICTED: uncharacterized protein LOC104727... 47 2e-10
ref|XP_010481107.1| PREDICTED: uncharacterized protein LOC104759... 46 4e-10
ref|XP_009112590.1| PREDICTED: uncharacterized protein LOC103837... 46 4e-10
ref|XP_013654532.1| PREDICTED: uncharacterized protein LOC106359... 48 5e-10
ref|XP_013715371.1| PREDICTED: uncharacterized protein LOC106419... 49 5e-10
ref|XP_013651180.1| PREDICTED: uncharacterized protein LOC106355... 48 5e-10
ref|XP_009140200.1| PREDICTED: putative ribonuclease H protein A... 50 8e-10
gb|ABW81176.1| non-LTR reverse transcriptase [Arabidopsis cebenn... 52 8e-10
ref|XP_009121338.1| PREDICTED: uncharacterized protein LOC103846... 48 1e-09
>ref|XP_009118883.1| PREDICTED: uncharacterized protein LOC103843855 [Brassica rapa]
Length = 1293
Score = 58.9 bits (141), Expect(2) = 8e-16
Identities = 25/54 (46%), Positives = 36/54 (66%)
Frame = -3
Query: 164 KHVKSCLTLDENNELTTIPTSEEIWNVVRKSKPNKAPGPNGFPVSFFKHNWEIV 3
K + C+TL+ N LTT P++ EI + P+KAPGP+GF SFF+ NW++V
Sbjct: 356 KAITPCITLETNESLTTTPSALEIREAMFAIHPDKAPGPDGFSASFFQSNWDVV 409
Score = 51.2 bits (121), Expect(2) = 8e-16
Identities = 26/61 (42%), Positives = 36/61 (59%)
Frame = -2
Query: 408 YDTQEEIAK*QSRNDTIALGERNTIFFHVTTLKRRKRNNIDCTQDNSGKVVSSREEI*EV 229
Y +EE K +SR ++LG+RNT FFH T RR RN I +D SG + +EI +V
Sbjct: 275 YKAEEEFWKQRSRQLWLSLGDRNTGFFHAATKGRRARNRISVIEDTSGNPIFEEDEIGKV 334
Query: 228 L 226
+
Sbjct: 335 I 335
>ref|XP_013669013.1| PREDICTED: uncharacterized protein LOC106373384 [Brassica napus]
Length = 802
Score = 63.5 bits (153), Expect(2) = 1e-14
Identities = 28/60 (46%), Positives = 39/60 (65%)
Frame = -3
Query: 182 MNEEIFKHVKSCLTLDENNELTTIPTSEEIWNVVRKSKPNKAPGPNGFPVSFFKHNWEIV 3
M E I K +K C+T ++N +L IP++EEI + P KAPGP+GF FF+ NWE+V
Sbjct: 402 MEEVISKAIKPCVTNEQNEKLKAIPSAEEIKEALFSIHPEKAPGPDGFSACFFQSNWEVV 461
Score = 42.7 bits (99), Expect(2) = 1e-14
Identities = 22/57 (38%), Positives = 32/57 (56%)
Frame = -2
Query: 408 YDTQEEIAK*QSRNDTIALGERNTIFFHVTTLKRRKRNNIDCTQDNSGKVVSSREEI 238
Y T+E K +SR + LG++NT FFH +T KR+ N ++ G +V EEI
Sbjct: 324 YITEENYWKQRSRQIWLHLGDKNTGFFHASTKKRKAINKFAMIENEEGVIVFKEEEI 380
>ref|XP_013713678.1| PREDICTED: uncharacterized protein LOC106417415 [Brassica napus]
Length = 1033
Score = 58.9 bits (141), Expect(2) = 3e-13
Identities = 27/58 (46%), Positives = 37/58 (63%)
Frame = -3
Query: 176 EEIFKHVKSCLTLDENNELTTIPTSEEIWNVVRKSKPNKAPGPNGFPVSFFKHNWEIV 3
E + K + C+T N ELT IP+ EI + + P+KAPGP+GF SFF+ NWE+V
Sbjct: 183 ELVNKAITPCITQATNEELTKIPSPAEIRDALFAIHPDKAPGPDGFSASFFQSNWEVV 240
Score = 42.4 bits (98), Expect(2) = 3e-13
Identities = 22/61 (36%), Positives = 34/61 (55%)
Frame = -2
Query: 408 YDTQEEIAK*QSRNDTIALGERNTIFFHVTTLKRRKRNNIDCTQDNSGKVVSSREEI*EV 229
Y +EE + +SR + LG++NT FFH +T RR RN I ++ G V ++I E
Sbjct: 106 YKAEEEFWRQRSRLLWLTLGDKNTTFFHASTKGRRARNRISVIENAEGLPVFEDDQIAET 165
Query: 228 L 226
+
Sbjct: 166 I 166
>ref|XP_013674083.1| PREDICTED: uncharacterized protein LOC106378513 [Brassica napus]
Length = 1236
Score = 58.2 bits (139), Expect(2) = 5e-13
Identities = 27/58 (46%), Positives = 37/58 (63%)
Frame = -3
Query: 176 EEIFKHVKSCLTLDENNELTTIPTSEEIWNVVRKSKPNKAPGPNGFPVSFFKHNWEIV 3
E + K + C+T N ELT IP+ EI + + P+KAPGP+GF SFF+ NWE+V
Sbjct: 351 ELVNKAITPCITQATNEELTKIPSPAEIRDALFAIHPDKAPGPDGFSSSFFQSNWEVV 408
Score = 42.4 bits (98), Expect(2) = 5e-13
Identities = 22/61 (36%), Positives = 34/61 (55%)
Frame = -2
Query: 408 YDTQEEIAK*QSRNDTIALGERNTIFFHVTTLKRRKRNNIDCTQDNSGKVVSSREEI*EV 229
Y +EE + +SR + LG++NT FFH +T RR RN I ++ G V ++I E
Sbjct: 274 YKAEEEFWRQRSRLLWLTLGDKNTTFFHASTKGRRARNRISVIENAEGLPVFEDDQIAET 333
Query: 228 L 226
+
Sbjct: 334 I 334
>ref|XP_009124790.1| PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC103849810
[Brassica rapa]
Length = 1884
Score = 57.8 bits (138), Expect(2) = 4e-12
Identities = 28/65 (43%), Positives = 40/65 (61%), Gaps = 2/65 (3%)
Frame = -3
Query: 191 SNNMN--EEIFKHVKSCLTLDENNELTTIPTSEEIWNVVRKSKPNKAPGPNGFPVSFFKH 18
SNN + + I K +K C+ +N +L IPT+EEI +KAPGP+GF SFF+
Sbjct: 1026 SNNFDGTQTISKALKPCVIQKQNEDLIKIPTTEEIKEATFSIHADKAPGPDGFSASFFQS 1085
Query: 17 NWEIV 3
NWE++
Sbjct: 1086 NWEVL 1090
Score = 39.7 bits (91), Expect(2) = 4e-12
Identities = 21/61 (34%), Positives = 32/61 (52%)
Frame = -2
Query: 408 YDTQEEIAK*QSRNDTIALGERNTIFFHVTTLKRRKRNNIDCTQDNSGKVVSSREEI*EV 229
Y +EE K +SRN + LG+ NT +FH T R+ +N + +D G E+I V
Sbjct: 956 YKEEEEFWKQRSRNLWLTLGDSNTGYFHAITKIRKAKNRMSVLEDEDGIPQYEEEQISTV 1015
Query: 228 L 226
+
Sbjct: 1016 I 1016
Score = 39.7 bits (91), Expect(2) = 4e-06
Identities = 21/61 (34%), Positives = 32/61 (52%)
Frame = -2
Query: 408 YDTQEEIAK*QSRNDTIALGERNTIFFHVTTLKRRKRNNIDCTQDNSGKVVSSREEI*EV 229
Y +EE K +SRN + LG+ NT +FH T R+ +N + +D G E+I V
Sbjct: 1427 YKEEEEFWKQRSRNLWLTLGDSNTGYFHAITKIRKAKNRMSVLEDEDGIPQYEEEQISTV 1486
Query: 228 L 226
+
Sbjct: 1487 I 1487
Score = 37.4 bits (85), Expect(2) = 4e-06
Identities = 20/51 (39%), Positives = 29/51 (56%), Gaps = 2/51 (3%)
Frame = -3
Query: 191 SNNMN--EEIFKHVKSCLTLDENNELTTIPTSEEIWNVVRKSKPNKAPGPN 45
SNN + + I K +K C+ +N +L IPT+EEI +KAPGP+
Sbjct: 1497 SNNFDGTQTISKALKPCVIQKQNEDLIKIPTTEEIKEATFSIHADKAPGPD 1547
>gb|AAC28197.1| contains similarity to reverse transcriptases [Arabidopsis
thaliana] gi|7267156|emb|CAB77868.1| putative reverse
transcriptase [Arabidopsis thaliana]
Length = 1077
Score = 51.2 bits (121), Expect(2) = 4e-11
Identities = 23/49 (46%), Positives = 29/49 (59%)
Frame = -3
Query: 149 CLTLDENNELTTIPTSEEIWNVVRKSKPNKAPGPNGFPVSFFKHNWEIV 3
C+T D NN L ++PT EI P+KAPG +GF SFF+ NW V
Sbjct: 391 CITTDMNNTLISLPTVAEIKQACLSIHPDKAPGRDGFSASFFQSNWSTV 439
Score = 43.1 bits (100), Expect(2) = 4e-11
Identities = 23/61 (37%), Positives = 34/61 (55%)
Frame = -2
Query: 408 YDTQEEIAK*QSRNDTIALGERNTIFFHVTTLKRRKRNNIDCTQDNSGKVVSSREEI*EV 229
Y +E K +SRN +ALG++N+ FFH T RR N I ++++G V EI E
Sbjct: 305 YRKEETFWKQRSRNLWLALGDKNSCFFHAATNSRRAINTISVIENSAGTSVYEDSEIIET 364
Query: 228 L 226
+
Sbjct: 365 I 365
>ref|XP_013624887.1| PREDICTED: uncharacterized protein LOC106331087 [Brassica oleracea
var. oleracea]
Length = 417
Score = 48.5 bits (114), Expect(2) = 6e-11
Identities = 22/56 (39%), Positives = 34/56 (60%)
Frame = -3
Query: 170 IFKHVKSCLTLDENNELTTIPTSEEIWNVVRKSKPNKAPGPNGFPVSFFKHNWEIV 3
I + + C++ NN LT +P+ EI + P+KA GP+GF SFF+ NW++V
Sbjct: 354 IIRALTPCISEAMNNSLTGLPSPLEIKEALFAIHPDKASGPDGFSASFFQTNWDLV 409
Score = 45.1 bits (105), Expect(2) = 6e-11
Identities = 25/61 (40%), Positives = 36/61 (59%)
Frame = -2
Query: 408 YDTQEEIAK*QSRNDTIALGERNTIFFHVTTLKRRKRNNIDCTQDNSGKVVSSREEI*EV 229
Y +EE K +SR +ALG++NT FFH +T RR RN I +++ G V +I EV
Sbjct: 275 YRAEEEFWKQRSRQLWLALGDQNTAFFHASTKGRRTRNRISVIENSVGIPVYEDGKIVEV 334
Query: 228 L 226
+
Sbjct: 335 I 335
>ref|XP_010451517.1| PREDICTED: uncharacterized protein LOC104733650 [Camelina sativa]
Length = 506
Score = 53.9 bits (128), Expect(2) = 1e-10
Identities = 22/59 (37%), Positives = 37/59 (62%)
Frame = -3
Query: 179 NEEIFKHVKSCLTLDENNELTTIPTSEEIWNVVRKSKPNKAPGPNGFPVSFFKHNWEIV 3
N + + + C++++ N EL IP++ EI + P+KAPGP+GF SFF+ NW+ +
Sbjct: 205 NNVVKEAISPCVSIEANEELIKIPSAAEIKSACFDIHPDKAPGPDGFSASFFQTNWDTI 263
Score = 38.5 bits (88), Expect(2) = 1e-10
Identities = 19/57 (33%), Positives = 30/57 (52%)
Frame = -2
Query: 408 YDTQEEIAK*QSRNDTIALGERNTIFFHVTTLKRRKRNNIDCTQDNSGKVVSSREEI 238
Y +EE K +S + LG++N+ +FH T R+ NNI + + G V +EI
Sbjct: 129 YRKEEEFWKQRSHQLWLTLGDKNSGYFHAATKNRKAINNISVLESDQGHPVYEEQEI 185
>ref|XP_009113016.1| PREDICTED: uncharacterized protein LOC103838337 [Brassica rapa]
Length = 1257
Score = 54.7 bits (130), Expect(2) = 2e-10
Identities = 25/56 (44%), Positives = 36/56 (64%)
Frame = -3
Query: 170 IFKHVKSCLTLDENNELTTIPTSEEIWNVVRKSKPNKAPGPNGFPVSFFKHNWEIV 3
+++ ++ C+T N ELT P+ EEI P+KAPGP+GF VSFF+ NW +V
Sbjct: 319 VWEALQPCITQQINEELTKDPSPEEIREATFAIHPDKAPGPDGFSVSFFQANWCVV 374
Score = 37.4 bits (85), Expect(2) = 2e-10
Identities = 16/48 (33%), Positives = 28/48 (58%)
Frame = -2
Query: 408 YDTQEEIAK*QSRNDTIALGERNTIFFHVTTLKRRKRNNIDCTQDNSG 265
Y ++E + +SR + LG+ NT +FH T R+ +N + +D+SG
Sbjct: 240 YKSEEAFWRQRSRQLWLILGDANTAYFHAVTKGRKAKNRLSVMEDDSG 287
>ref|XP_009135908.1| PREDICTED: uncharacterized protein LOC103860050 [Brassica rapa]
Length = 1207
Score = 50.8 bits (120), Expect(2) = 2e-10
Identities = 23/62 (37%), Positives = 37/62 (59%)
Frame = -3
Query: 191 SNNMNEEIFKHVKSCLTLDENNELTTIPTSEEIWNVVRKSKPNKAPGPNGFPVSFFKHNW 12
S++ + + +KS +T ++N L PT EI + P+KAPGP+GF SFF+ NW
Sbjct: 266 SSDCTDTVHSALKSKITAEQNEMLIMPPTDFEIRAALFSIHPDKAPGPDGFSASFFQTNW 325
Query: 11 EI 6
++
Sbjct: 326 DV 327
Score = 41.2 bits (95), Expect(2) = 2e-10
Identities = 21/61 (34%), Positives = 32/61 (52%)
Frame = -2
Query: 408 YDTQEEIAK*QSRNDTIALGERNTIFFHVTTLKRRKRNNIDCTQDNSGKVVSSREEI*EV 229
Y +EE + +SR ++LG+RNT +FH RR RN + G V ++I EV
Sbjct: 194 YKAEEEYWRQRSRQMWLSLGDRNTGYFHAAARGRRARNRFSMIETAEGTAVFEEKQIAEV 253
Query: 228 L 226
+
Sbjct: 254 I 254
>ref|XP_009129032.1| PREDICTED: uncharacterized protein LOC103853884 [Brassica rapa]
Length = 1091
Score = 51.2 bits (121), Expect(2) = 2e-10
Identities = 23/59 (38%), Positives = 36/59 (61%)
Frame = -3
Query: 179 NEEIFKHVKSCLTLDENNELTTIPTSEEIWNVVRKSKPNKAPGPNGFPVSFFKHNWEIV 3
++ I + ++ C+T N +LT IP ++EI +KAPGP+GF +FF NWE+V
Sbjct: 151 SQTIAEALRPCITDAHNEKLTEIPQAQEIKMATFTIHADKAPGPDGFSAAFFHSNWEVV 209
Score = 40.8 bits (94), Expect(2) = 2e-10
Identities = 20/61 (32%), Positives = 34/61 (55%)
Frame = -2
Query: 408 YDTQEEIAK*QSRNDTIALGERNTIFFHVTTLKRRKRNNIDCTQDNSGKVVSSREEI*EV 229
Y +EE K +SR ++LG+ NT +FH + R +N + ++ G+ V E+I EV
Sbjct: 75 YQKEEEFWKQRSRQLWLSLGDSNTGYFHAVSKGRSAKNRMSVIENKEGRPVYEEEQIAEV 134
Query: 228 L 226
+
Sbjct: 135 I 135
>ref|XP_010445339.1| PREDICTED: uncharacterized protein LOC104727990 [Camelina sativa]
Length = 1030
Score = 47.4 bits (111), Expect(2) = 2e-10
Identities = 20/47 (42%), Positives = 28/47 (59%)
Frame = -3
Query: 149 CLTLDENNELTTIPTSEEIWNVVRKSKPNKAPGPNGFPVSFFKHNWE 9
C+T N EL IP+ E+ N P+K PGP+GF SF++ NW+
Sbjct: 179 CITEAMNEELLKIPSPTEVKNACFDIHPDKVPGPDGFSASFYQPNWD 225
Score = 44.3 bits (103), Expect(2) = 2e-10
Identities = 22/57 (38%), Positives = 31/57 (54%)
Frame = -2
Query: 408 YDTQEEIAK*QSRNDTIALGERNTIFFHVTTLKRRKRNNIDCTQDNSGKVVSSREEI 238
Y +EEI K +SR +ALG++N FFH T R+ NNI + G + +EI
Sbjct: 93 YQKEEEIWKQRSRQLWLALGDKNFGFFHAATKSRKAINNISVLESEQGDAIYEEQEI 149
>ref|XP_010481107.1| PREDICTED: uncharacterized protein LOC104759943 [Camelina sativa]
Length = 1672
Score = 46.2 bits (108), Expect(2) = 4e-10
Identities = 19/58 (32%), Positives = 34/58 (58%)
Frame = -3
Query: 176 EEIFKHVKSCLTLDENNELTTIPTSEEIWNVVRKSKPNKAPGPNGFPVSFFKHNWEIV 3
+++ +++K ++ + N ELT T EE++ VR KAPGP+GF F+ +W +
Sbjct: 768 DDVVQYIKPRVSEEMNKELTEPITEEELYRAVRSMSREKAPGPDGFNPGFYHGHWSTI 825
Score = 44.7 bits (104), Expect(2) = 4e-10
Identities = 25/61 (40%), Positives = 32/61 (52%)
Frame = -2
Query: 408 YDTQEEIAK*QSRNDTIALGERNTIFFHVTTLKRRKRNNIDCTQDNSGKVVSSREEI*EV 229
Y +EE K +SR + G+RNT FFH T +RR N I D GKV S + I V
Sbjct: 690 YRMEEEYWKTKSRIQWLQAGDRNTRFFHAKTKQRRSYNRISAITDTHGKVWSDEKGISRV 749
Query: 228 L 226
+
Sbjct: 750 I 750
>ref|XP_009112590.1| PREDICTED: uncharacterized protein LOC103837948 [Brassica rapa]
Length = 1415
Score = 46.2 bits (108), Expect(2) = 4e-10
Identities = 22/48 (45%), Positives = 28/48 (58%)
Frame = -3
Query: 146 LTLDENNELTTIPTSEEIWNVVRKSKPNKAPGPNGFPVSFFKHNWEIV 3
LT +EN+ L +PTS EI + KAPGP+GF FF +WE V
Sbjct: 484 LTGEENDSLIAVPTSGEIRDAAFSINAEKAPGPDGFSAGFFHTHWEDV 531
Score = 44.7 bits (104), Expect(2) = 4e-10
Identities = 22/61 (36%), Positives = 35/61 (57%)
Frame = -2
Query: 408 YDTQEEIAK*QSRNDTIALGERNTIFFHVTTLKRRKRNNIDCTQDNSGKVVSSREEI*EV 229
Y +EE + +SR + LG+RNT +FH TT R++ N + G++V EEI +V
Sbjct: 397 YSAEEEYWRQRSRALWLKLGDRNTGYFHATTKNRKRINGFSVIEREDGQMVHKEEEIVQV 456
Query: 228 L 226
+
Sbjct: 457 I 457
>ref|XP_013654532.1| PREDICTED: uncharacterized protein LOC106359365 [Brassica napus]
Length = 1233
Score = 48.1 bits (113), Expect(2) = 5e-10
Identities = 23/61 (37%), Positives = 34/61 (55%)
Frame = -3
Query: 185 NMNEEIFKHVKSCLTLDENNELTTIPTSEEIWNVVRKSKPNKAPGPNGFPVSFFKHNWEI 6
N E + + +T + NN+L IP + EI + V +KAPGP+GF SFF NW+
Sbjct: 343 NREETVRYALSPMVTEETNNKLIAIPDAAEIKDAVFSIHADKAPGPDGFSASFFHTNWDS 402
Query: 5 V 3
+
Sbjct: 403 I 403
Score = 42.4 bits (98), Expect(2) = 5e-10
Identities = 21/61 (34%), Positives = 36/61 (59%)
Frame = -2
Query: 408 YDTQEEIAK*QSRNDTIALGERNTIFFHVTTLKRRKRNNIDCTQDNSGKVVSSREEI*EV 229
Y ++EE + +SR ++LG+RNT FFH T R++ N +D G +V ++I +V
Sbjct: 269 YLSEEEYWRQRSRLLWLSLGDRNTGFFHATAKNRKRTNGFSVIEDVEGNMVYQEDQIGKV 328
Query: 228 L 226
+
Sbjct: 329 I 329
>ref|XP_013715371.1| PREDICTED: uncharacterized protein LOC106419165 [Brassica napus]
Length = 1028
Score = 48.5 bits (114), Expect(2) = 5e-10
Identities = 20/52 (38%), Positives = 35/52 (67%)
Frame = -3
Query: 158 VKSCLTLDENNELTTIPTSEEIWNVVRKSKPNKAPGPNGFPVSFFKHNWEIV 3
+ + ++ ++N+ L+ IPT +EI + + P+KAPGP+GF +FF+ NW V
Sbjct: 105 LSATVSAEDNDTLSRIPTPKEIKDALFSIHPDKAPGPDGFSAAFFRTNWGTV 156
Score = 42.0 bits (97), Expect(2) = 5e-10
Identities = 23/61 (37%), Positives = 33/61 (54%)
Frame = -2
Query: 408 YDTQEEIAK*QSRNDTIALGERNTIFFHVTTLKRRKRNNIDCTQDNSGKVVSSREEI*EV 229
Y +EE + +SR +ALG++NT FFH T RR N +++SG V EI V
Sbjct: 22 YKEEEEYWRQRSRTLWLALGDKNTGFFHATARIRRVLNKFSVIENSSGDAVFEESEILTV 81
Query: 228 L 226
+
Sbjct: 82 I 82
>ref|XP_013651180.1| PREDICTED: uncharacterized protein LOC106355849 [Brassica napus]
Length = 1321
Score = 48.1 bits (113), Expect(2) = 5e-10
Identities = 25/61 (40%), Positives = 37/61 (60%)
Frame = -2
Query: 408 YDTQEEIAK*QSRNDTIALGERNTIFFHVTTLKRRKRNNIDCTQDNSGKVVSSREEI*EV 229
Y +EE K +SR ++LG+RNT FFH T R++ N +D+ GK+V EEI +V
Sbjct: 305 YVKEEEYWKQRSRLLWLSLGDRNTGFFHATARNRKRANAFSVIEDSEGKMVYQEEEISKV 364
Query: 228 L 226
+
Sbjct: 365 I 365
Score = 42.4 bits (98), Expect(2) = 5e-10
Identities = 23/62 (37%), Positives = 32/62 (51%), Gaps = 1/62 (1%)
Frame = -3
Query: 191 SNNMNEEIFKHVKSCLTLDENNE-LTTIPTSEEIWNVVRKSKPNKAPGPNGFPVSFFKHN 15
S EE + + + DE NE L ++P+ EI +KAPGP+GF SFF N
Sbjct: 377 SKGNREETVSYALAPMVSDEENERLISLPSPLEIKEAAFSIHADKAPGPDGFSGSFFHTN 436
Query: 14 WE 9
W+
Sbjct: 437 WD 438
>ref|XP_009140200.1| PREDICTED: putative ribonuclease H protein At1g65750 [Brassica
rapa]
Length = 1086
Score = 50.4 bits (119), Expect(2) = 8e-10
Identities = 23/60 (38%), Positives = 35/60 (58%)
Frame = -3
Query: 182 MNEEIFKHVKSCLTLDENNELTTIPTSEEIWNVVRKSKPNKAPGPNGFPVSFFKHNWEIV 3
+ + + K +K ++ EN +L IPT EEI V +KAPGP+GF FF +WE++
Sbjct: 153 IEDVVDKALKPMVSSSENEKLIRIPTPEEIKTAVFSIHADKAPGPDGFSAGFFHAHWEVI 212
Score = 39.3 bits (90), Expect(2) = 8e-10
Identities = 21/61 (34%), Positives = 33/61 (54%)
Frame = -2
Query: 408 YDTQEEIAK*QSRNDTIALGERNTIFFHVTTLKRRKRNNIDCTQDNSGKVVSSREEI*EV 229
Y +E + +SR + LG+RN+ FFH T R++ N + +D SG V EI +V
Sbjct: 75 YRAEEAYWRQRSRLLWLRLGDRNSGFFHAATKNRKRANALTVIEDGSGNPVFQEGEIAQV 134
Query: 228 L 226
+
Sbjct: 135 I 135
>gb|ABW81176.1| non-LTR reverse transcriptase [Arabidopsis cebennensis]
Length = 464
Score = 52.0 bits (123), Expect(2) = 8e-10
Identities = 28/55 (50%), Positives = 37/55 (67%), Gaps = 1/55 (1%)
Frame = -2
Query: 399 QEEIAK*Q-SRNDTIALGERNTIFFHVTTLKRRKRNNIDCTQDNSGKVVSSREEI 238
QEEI Q SR IALG+RNT +FH +T+ RR+RN I+ +D+ GK V EE+
Sbjct: 304 QEEIVWFQKSREKWIALGDRNTKYFHTSTIIRRRRNQIEMLKDDEGKWVEEPEEL 358
Score = 37.7 bits (86), Expect(2) = 8e-10
Identities = 18/50 (36%), Positives = 31/50 (62%)
Frame = -3
Query: 152 SCLTLDENNELTTIPTSEEIWNVVRKSKPNKAPGPNGFPVSFFKHNWEIV 3
+CLT +E ++L+ S ++ N +R KAPGP+G+ F++ WE+V
Sbjct: 388 TCLTREEISDLSKPFMSIDVENSMRGMGRFKAPGPDGYQPVFYQDCWEVV 437
>ref|XP_009121338.1| PREDICTED: uncharacterized protein LOC103846184 [Brassica rapa]
Length = 1285
Score = 47.8 bits (112), Expect(2) = 1e-09
Identities = 21/52 (40%), Positives = 31/52 (59%)
Frame = -3
Query: 158 VKSCLTLDENNELTTIPTSEEIWNVVRKSKPNKAPGPNGFPVSFFKHNWEIV 3
++ C++ N L P++ EI P+KAPGP+GF SFF+ NWE+V
Sbjct: 376 LRPCVSSQINEALIQDPSAAEIREATFAIHPDKAPGPDGFSASFFQANWEVV 427
Score = 41.6 bits (96), Expect(2) = 1e-09
Identities = 21/61 (34%), Positives = 35/61 (57%)
Frame = -2
Query: 408 YDTQEEIAK*QSRNDTIALGERNTIFFHVTTLKRRKRNNIDCTQDNSGKVVSSREEI*EV 229
Y +EE K +SR +ALG+ NT +FH TT R+ +N + ++++G E+I V
Sbjct: 293 YKQEEEYWKQRSRQLWLALGDSNTSYFHATTKARKSKNRMTVIENDAGVPWFEEEQIANV 352
Query: 228 L 226
+
Sbjct: 353 I 353