BLASTX nr result

ID: Papaver29_contig00060784 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver29_contig00060784
         (422 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_008237231.1| PREDICTED: uncharacterized protein LOC103335...    60   8e-07
ref|XP_008233458.1| PREDICTED: putative ribonuclease H protein A...    60   8e-07
ref|XP_008225175.1| PREDICTED: putative ribonuclease H protein A...    60   8e-07
ref|XP_008224763.1| PREDICTED: putative ribonuclease H protein A...    60   8e-07
ref|XP_008391252.1| PREDICTED: putative ribonuclease H protein A...    57   5e-06

>ref|XP_008237231.1| PREDICTED: uncharacterized protein LOC103335974 [Prunus mume]
          Length = 190

 Score = 59.7 bits (143), Expect = 8e-07
 Identities = 43/123 (34%), Positives = 56/123 (45%), Gaps = 10/123 (8%)
 Frame = -3

Query: 360 ICAWFDKLFVR-QLQEPDLC----KIAITAWCIWISRCDAVFKGTSPSVENIIQRCKREF 196
           +C W  ++ +R  L E DL      IA T W IW  RC  V KG   S    I       
Sbjct: 1   MCEWLLEVVIRASLNEADLAHVAKSIAFTCWIIWKFRCKVVIKGRPMSPLATIFAIST-- 58

Query: 195 AVLEYQPIKNHRTLEPQN-----RINLHWQPPVLDYFKINSDGSFSSTNNNGGIGLICRD 31
           A LE+        L+  +       +  W PPVL   KIN D ++S T+N  GIGL+ RD
Sbjct: 59  AELEFVDAVTATRLDCPSPTLVETTSYAWIPPVLHRVKINLDAAWSPTSNQDGIGLVVRD 118

Query: 30  FAG 22
           + G
Sbjct: 119 YMG 121


>ref|XP_008233458.1| PREDICTED: putative ribonuclease H protein At1g65750 [Prunus mume]
          Length = 811

 Score = 59.7 bits (143), Expect = 8e-07
 Identities = 33/103 (32%), Positives = 50/103 (48%), Gaps = 6/103 (5%)
 Frame = -3

Query: 300 IAITAWCIWISRCDAVFKGTSPSVENIIQRCKREFAVLE-----YQPIKNHRTLEPQNRI 136
           ++   W IW +RCD VFKGT+P    +I+R    ++        +  +   RT      +
Sbjct: 577 LSFLCWEIWKARCDFVFKGTNPDPRLVIKRANDSYSEFWEANTCFSRLSGSRTSPSSPYV 636

Query: 135 NL-HWQPPVLDYFKINSDGSFSSTNNNGGIGLICRDFAGEHHG 10
               W PP  +  KIN DG++S   ++G IG+I RD  G   G
Sbjct: 637 GRDRWLPPPANAIKINFDGAWSPGTSHGSIGVIARDDCGTWRG 679


>ref|XP_008225175.1| PREDICTED: putative ribonuclease H protein At1g65750 [Prunus mume]
          Length = 583

 Score = 59.7 bits (143), Expect = 8e-07
 Identities = 33/103 (32%), Positives = 50/103 (48%), Gaps = 6/103 (5%)
 Frame = -3

Query: 300 IAITAWCIWISRCDAVFKGTSPSVENIIQRCKREFAVLE-----YQPIKNHRTLEPQNRI 136
           ++   W IW +RCD VFKGT+P    +I+R    ++        +  +   RT      +
Sbjct: 349 LSFLCWEIWKARCDFVFKGTNPDPRLVIKRANDSYSEFWEANTCFSRLSGSRTSPSSPYV 408

Query: 135 NL-HWQPPVLDYFKINSDGSFSSTNNNGGIGLICRDFAGEHHG 10
               W PP  +  KIN DG++S   ++G IG+I RD  G   G
Sbjct: 409 GRDRWLPPPANAIKINFDGAWSPGTSHGSIGVIARDDCGTWRG 451


>ref|XP_008224763.1| PREDICTED: putative ribonuclease H protein At1g65750 [Prunus mume]
          Length = 468

 Score = 59.7 bits (143), Expect = 8e-07
 Identities = 33/103 (32%), Positives = 50/103 (48%), Gaps = 6/103 (5%)
 Frame = -3

Query: 300 IAITAWCIWISRCDAVFKGTSPSVENIIQRCKREFAVLE-----YQPIKNHRTLEPQNRI 136
           ++   W IW +RCD VFKGT+P    +I+R    ++        +  +   RT      +
Sbjct: 234 LSFLCWEIWKARCDFVFKGTNPDPRLVIKRANDSYSEFWEANTCFSRLSGSRTSPSSPYV 293

Query: 135 NL-HWQPPVLDYFKINSDGSFSSTNNNGGIGLICRDFAGEHHG 10
               W PP  +  KIN DG++S   ++G IG+I RD  G   G
Sbjct: 294 GRDRWLPPPANAIKINFDGAWSPGTSHGSIGVIARDDCGTWRG 336


>ref|XP_008391252.1| PREDICTED: putative ribonuclease H protein At1g65750 [Malus
           domestica]
          Length = 623

 Score = 57.0 bits (136), Expect = 5e-06
 Identities = 35/116 (30%), Positives = 55/116 (47%), Gaps = 8/116 (6%)
 Frame = -3

Query: 330 RQLQEPDLCKIAITAWCIWISRCDAVFKGTSPSVENIIQRCKREFAVLEYQPIKNHRTLE 151
           R+  E  L + A   W IW +R D VFKG+      I+   ++     EY+   N  +LE
Sbjct: 385 REDAEAILQEFAFGLWRIWKNRNDVVFKGSHCQPNEILTVWRKNIG--EYREAMNRGSLE 442

Query: 150 --------PQNRINLHWQPPVLDYFKINSDGSFSSTNNNGGIGLICRDFAGEHHGS 7
                   P  ++ + W+ P    FK+N+D ++  T+   G G + RDFAG  H +
Sbjct: 443 ECAVRPHQPPPKMPMLWEKPKFGSFKLNTDAAWCCTSYRAGAGWVIRDFAGILHAA 498


Top