BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver29_contig00060112
         (861 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN66775.1| hypothetical protein VITISV_035302 [Vitis vinifera]    64   1e-07
gb|ABA91380.1| retrotransposon protein, putative, Ty1-copia subc...    42   6e-06
gb|AAR87163.1| putative polyprotein [Oryza sativa Japonica Group...    42   8e-06
gb|AAL31093.1|AC091749_22 putative retrotransposon-related prote...    37   9e-06

>emb|CAN66775.1| hypothetical protein VITISV_035302 [Vitis vinifera]
          Length = 734

 Score = 63.9 bits (154), Expect = 1e-07
 Identities = 59/166 (35%), Positives = 79/166 (47%), Gaps = 4/166 (2%)
 Frame = -3

Query: 493  LHFSRENYIEKVLENFGRKDVK----SANTPLAA*FRLSVKLPLILQSVASHML*FVHGQ 326
            L+ S + YIEKVLE FG +  K     ++ P A+             +V S M   V  +
Sbjct: 556  LYLSWKKYIEKVLERFGMQGSKLREYMSHVPYAS-------------TVGSIMYVMVCTR 602

Query: 325  QSKKQPVS*VSTWNF*EKLIEKQ*IKRISR*LRGNATVGLVIDKHIGDSRYVVEGIYILI 146
              K   VS VS +    + I  Q +K I R LRG + VGLV DK+   SR +V  +    
Sbjct: 603  LEKSHAVSVVSRYMDHPEKIHWQAVKWILRHLRGTSHVGLVYDKNFDISRGIVGYVDFDY 662

Query: 145  VQMILIKKILDRIYVHFM**TGSWRAILQRKIALVTIEAECMAVLE 8
            V  +  ++ L R          SW+A LQ  IAL TIEA+CM V E
Sbjct: 663  VGDLDRRRSLTRYVFTLCGNVISWKATLQSTIALSTIEAKCMIVTE 708


>gb|ABA91380.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
           Japonica Group]
          Length = 1138

 Score = 41.6 bits (96), Expect(2) = 6e-06
 Identities = 21/38 (55%), Positives = 25/38 (65%)
 Frame = -3

Query: 493 LHFSRENYIEKVLENFGRKDVKSANTPLAA*FRLSVKL 380
           L+ S++ YIEKVL  F   D K  +TPLAA FRLS  L
Sbjct: 869 LYLSQKGYIEKVLRRFNMHDAKPVSTPLAAHFRLSSDL 906



 Score = 36.6 bits (83), Expect(2) = 6e-06
 Identities = 18/37 (48%), Positives = 23/37 (62%)
 Frame = -2

Query: 365  VGSITYVMICTWSTIEKAASIVSIYMEFLGKTH*KAV 255
            VGS+ Y M+C+   +  A S+VS YM   GK H KAV
Sbjct: 926  VGSLMYAMVCSRPDLSHALSVVSRYMANPGKEHWKAV 962


>gb|AAR87163.1| putative polyprotein [Oryza sativa Japonica Group]
            gi|53370655|gb|AAU89150.1| integrase core domain
            containing protein [Oryza sativa Japonica Group]
            gi|108710286|gb|ABF98081.1| retrotransposon protein,
            putative, Ty1-copia subclass [Oryza sativa Japonica
            Group]
          Length = 1322

 Score = 41.6 bits (96), Expect(2) = 8e-06
 Identities = 19/37 (51%), Positives = 24/37 (64%)
 Frame = -2

Query: 365  VGSITYVMICTWSTIEKAASIVSIYMEFLGKTH*KAV 255
            VGS+ Y M+C+W  +  A S+VS YM   GK H KAV
Sbjct: 1110 VGSLMYAMVCSWPDLSHAMSLVSRYMANPGKEHWKAV 1146



 Score = 36.2 bits (82), Expect(2) = 8e-06
 Identities = 16/35 (45%), Positives = 24/35 (68%)
 Frame = -3

Query: 493  LHFSRENYIEKVLENFGRKDVKSANTPLAA*FRLS 389
            L  S+++YI+KVL+ F   D K  +TP+A  F+LS
Sbjct: 1053 LFLSQQSYIKKVLQRFNMHDAKPVSTPIAPHFKLS 1087


>gb|AAL31093.1|AC091749_22 putative retrotransposon-related protein [Oryza sativa Japonica
            Group] gi|22655747|gb|AAN04164.1| Putative
            retrotransposon protein [Oryza sativa Japonica Group]
            gi|31431214|gb|AAP53029.1| retrotransposon protein,
            putative, Ty1-copia subclass, expressed [Oryza sativa
            Japonica Group]
          Length = 1229

 Score = 37.0 bits (84), Expect(3) = 9e-06
 Identities = 19/44 (43%), Positives = 29/44 (65%), Gaps = 1/44 (2%)
 Frame = -3

Query: 517  INADLEANLHF-SRENYIEKVLENFGRKDVKSANTPLAA*FRLS 389
            I  D+ + L F S+++YI+KVL+ F   D K  +TP+A  F+LS
Sbjct: 990  ITRDINSGLLFLSQQSYIKKVLQRFNIHDAKPVSTPIAPHFKLS 1033



 Score = 37.0 bits (84), Expect(3) = 9e-06
 Identities = 28/81 (34%), Positives = 39/81 (48%)
 Frame = -2

Query: 365  VGSITYVMICTWSTIEKAASIVSIYMEFLGKTH*KAVNKEDFEVTKGQRHCWFGDRQTHW 186
            VGS+ Y M+C+   +  A S+VS YM   GK H KAV +  F   +G         +T  
Sbjct: 1056 VGSLMYAMVCSRPVLSHAMSLVSRYMANPGKEHWKAV-QWIFRYLRGTADACLKFGRTDK 1114

Query: 185  *FKICCRGYIYSNCANDFDKK 123
                   GY+ S+ A D DK+
Sbjct: 1115 GLV----GYVDSDFAADLDKR 1131



 Score = 22.7 bits (47), Expect(3) = 9e-06
 Identities = 9/13 (69%), Positives = 11/13 (84%)
 Frame = -1

Query: 126  KRSLTGYTFTLCS 88
            +RSLTGY FT+ S
Sbjct: 1131 RRSLTGYVFTIGS 1143