BLASTX nr result

ID: Papaver29_contig00056859 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver29_contig00056859
         (1200 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_010650199.1| PREDICTED: F-box protein At5g65850 [Vitis vi...    63   6e-07
ref|XP_002880407.1| hypothetical protein ARALYDRAFT_343751 [Arab...    59   6e-06

>ref|XP_010650199.1| PREDICTED: F-box protein At5g65850 [Vitis vinifera]
          Length = 376

 Score = 62.8 bits (151), Expect = 6e-07
 Identities = 56/169 (33%), Positives = 75/169 (44%)
 Frame = -1

Query: 843 LGFDPATKEHKFICAWDICPTGNLPSYQVFEVLTVGDTTWRRNNKIPPFKLSHFEDPSSY 664
           LGFDP T  +K +  W              E+ T+G  TWR  N   P          S 
Sbjct: 150 LGFDPPTNTYKILRTWWTRAVS-----LAHEIFTLGSQTWRVLNDDNP--------RHSI 196

Query: 663 TNGSTYYKTSVLYSKVHDDDDDRPEFIVAFDVGSEMFRALRVPKFILYRPRDTSMRRTCL 484
             G   Y    LY K ++  D     IVAFDVG E FR L +P+     PR   M  T L
Sbjct: 197 PLGDVVYVNGTLYWKGYESRD-----IVAFDVGVEKFRILELPE---NAPR-KFMTDTNL 247

Query: 483 SEVDGRLALLTRVSGYIVKLGLLDDRSKEHKGTGDENWTEVTIELPYFW 337
           +++ GRLAL+   S  + ++ L    S+E +G     W + TIE P +W
Sbjct: 248 TQIGGRLALVGHAS-LLFRIELEIWISEEGRG-----WIKKTIECPRYW 290


>ref|XP_002880407.1| hypothetical protein ARALYDRAFT_343751 [Arabidopsis lyrata subsp.
           lyrata] gi|297326246|gb|EFH56666.1| hypothetical protein
           ARALYDRAFT_343751 [Arabidopsis lyrata subsp. lyrata]
          Length = 517

 Score = 59.3 bits (142), Expect = 6e-06
 Identities = 64/255 (25%), Positives = 108/255 (42%), Gaps = 12/255 (4%)
 Frame = -1

Query: 843 LGFDPATKEHKFICAWDICPTGN-LPSYQVFEVLTVG-DTTWRRNNKIPPFKLSHFEDPS 670
           LG+DP    +K +C  +  P G      Q   VLT+G + +WR     P   L   + P 
Sbjct: 290 LGYDPIDGVYKVLCMIEGNPIGGKFGLAQELRVLTLGKENSWRLVEDFPQHFLDSLDAPD 349

Query: 669 SYTNGSTYYKTSVLYSKVHDDDDDRPEFIVAFDVGSEMFRALRVPKFILYRPRDTSMRRT 490
              NG +YYK  +       D   + +  ++FDV SE F  ++ P+       + S    
Sbjct: 350 ICINGVSYYKVLL-------DTQGKNKAFMSFDVRSEKFDLIKRPEL-----PERSFLPL 397

Query: 489 CLSEVDGRLALLTRVS-GYIVKLGLLDDRSKEHKGTGDENWTEVTIELPYFWGEERRLYF 313
            L+  +G+LALL+  S  Y ++L +L+D +K         W++ +  LP   GE R  ++
Sbjct: 398 KLTSYEGKLALLSSYSPDYRIELWVLEDAAK-------HEWSKKSYFLPTINGELRYGFY 450

Query: 312 TSVLGTDQIIIISYRRARSDD--KTYEDEVSVHSCNWKKTSTFRKIKITGIPS------- 160
              +  +  ++++    R+D     Y D          K +  R++ I GI         
Sbjct: 451 PFCVVDEGELVLAPLGVRTDPFYVLYYD---------PKKNCVRRVYIEGITELNENTYH 501

Query: 159 SIMYCFPFTIFTTFC 115
           SI+  FP  +    C
Sbjct: 502 SIISVFPGQVDNLMC 516


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