BLASTX nr result

ID: Papaver29_contig00056737 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver29_contig00056737
         (970 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_007035007.1| Pentatricopeptide repeat superfamily protein...    54   1e-07
ref|XP_012827291.1| PREDICTED: pentatricopeptide repeat-containi...    52   4e-07
gb|EYU19293.1| hypothetical protein MIMGU_mgv1a017958mg [Erythra...    52   4e-07
ref|XP_012487249.1| PREDICTED: pentatricopeptide repeat-containi...    49   3e-06

>ref|XP_007035007.1| Pentatricopeptide repeat superfamily protein, putative [Theobroma
           cacao] gi|508714036|gb|EOY05933.1| Pentatricopeptide
           repeat superfamily protein, putative [Theobroma cacao]
          Length = 609

 Score = 54.3 bits (129), Expect(2) = 1e-07
 Identities = 29/67 (43%), Positives = 42/67 (62%), Gaps = 3/67 (4%)
 Frame = -3

Query: 953 VPMCNILINGLCKAGYSDKVRKQFFEIPNKGLVAALTL*SVAYA---KKGCLF*AEKLII 783
           V   +ILI+G+CKAG  ++ RK F EI  KGLV  +   ++ ++   +KG    A+KL+ 
Sbjct: 475 VEFFSILIDGMCKAGRLEEARKMFIEISEKGLVPDVVTYNIMFSGLCRKGMSLEADKLLT 534

Query: 782 EMEIKGC 762
           EME KGC
Sbjct: 535 EMEEKGC 541



 Score = 30.4 bits (67), Expect(2) = 1e-07
 Identities = 19/44 (43%), Positives = 26/44 (59%), Gaps = 2/44 (4%)
 Frame = -1

Query: 727 GLL*EKYVIRAVEFLKGMRGKKFSPSKAPLSLLISSFVGD--CH 602
           GLL +K V RA+  L+ MR + FSP +A  S L+   + D  CH
Sbjct: 554 GLLRDKEVQRAMNRLEEMRRRNFSPDEAVTSKLLRLAMKDTKCH 597


>ref|XP_012827291.1| PREDICTED: pentatricopeptide repeat-containing protein At1g62930,
           chloroplastic-like [Erythranthe guttatus]
          Length = 386

 Score = 52.4 bits (124), Expect(2) = 4e-07
 Identities = 29/73 (39%), Positives = 43/73 (58%), Gaps = 3/73 (4%)
 Frame = -3

Query: 968 GIEIDVPMCNILINGLCKAGYSDKVRKQFFEIPNKGLVAALTL*SV---AYAKKGCLF*A 798
           G+  D+    ILINGLCK G  D  +    E+P+KGL   + + +V   +  +KGC+  A
Sbjct: 246 GLNPDIITYGILINGLCKDGKLDDAKMILNELPSKGLKPNIKIYTVILGSLCRKGCVDEA 305

Query: 797 EKLIIEMEIKGCS 759
           E LI++ME  GC+
Sbjct: 306 EDLIVKMERSGCA 318



 Score = 30.4 bits (67), Expect(2) = 4e-07
 Identities = 17/39 (43%), Positives = 23/39 (58%)
 Frame = -1

Query: 727 GLL*EKYVIRAVEFLKGMRGKKFSPSKAPLSLLISSFVG 611
           GLL +K V +A+ FL+ M  + FS   A  S+LIS   G
Sbjct: 330 GLLKKKEVYKAIPFLEEMHERGFSADAATSSMLISRLQG 368


>gb|EYU19293.1| hypothetical protein MIMGU_mgv1a017958mg [Erythranthe guttata]
          Length = 383

 Score = 52.4 bits (124), Expect(2) = 4e-07
 Identities = 29/73 (39%), Positives = 43/73 (58%), Gaps = 3/73 (4%)
 Frame = -3

Query: 968 GIEIDVPMCNILINGLCKAGYSDKVRKQFFEIPNKGLVAALTL*SV---AYAKKGCLF*A 798
           G+  D+    ILINGLCK G  D  +    E+P+KGL   + + +V   +  +KGC+  A
Sbjct: 243 GLNPDIITYGILINGLCKDGKLDDAKMILNELPSKGLKPNIKIYTVILGSLCRKGCVDEA 302

Query: 797 EKLIIEMEIKGCS 759
           E LI++ME  GC+
Sbjct: 303 EDLIVKMERSGCA 315



 Score = 30.4 bits (67), Expect(2) = 4e-07
 Identities = 17/39 (43%), Positives = 23/39 (58%)
 Frame = -1

Query: 727 GLL*EKYVIRAVEFLKGMRGKKFSPSKAPLSLLISSFVG 611
           GLL +K V +A+ FL+ M  + FS   A  S+LIS   G
Sbjct: 327 GLLKKKEVYKAIPFLEEMHERGFSADAATSSMLISRLQG 365


>ref|XP_012487249.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
           mitochondrial-like [Gossypium raimondii]
           gi|763771076|gb|KJB38291.1| hypothetical protein
           B456_006G247100 [Gossypium raimondii]
          Length = 638

 Score = 49.3 bits (116), Expect(2) = 3e-06
 Identities = 26/70 (37%), Positives = 39/70 (55%), Gaps = 3/70 (4%)
 Frame = -3

Query: 962 EIDVPMCNILINGLCKAGYSDKVRKQFFEIPNKGLVAALTL*SV---AYAKKGCLF*AEK 792
           E  + + +ILI G+C+ G  ++ R  F E+  KG V  +   ++      KKG +  A K
Sbjct: 491 ESSIELYSILIYGMCRTGRMEEARNMFNEMSRKGFVPDVVTYNILIDGLCKKGMILEANK 550

Query: 791 LIIEMEIKGC 762
           LI+EME KGC
Sbjct: 551 LIVEMEEKGC 560



 Score = 30.4 bits (67), Expect(2) = 3e-06
 Identities = 16/40 (40%), Positives = 24/40 (60%)
 Frame = -1

Query: 727 GLL*EKYVIRAVEFLKGMRGKKFSPSKAPLSLLISSFVGD 608
           G L E  +  A+  LK MR + F+P++A  SLL++  V D
Sbjct: 573 GFLRENNIPEAMNLLKEMRRRNFAPNEAVTSLLLNLAVED 612


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