BLASTX nr result

ID: Papaver29_contig00054824 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver29_contig00054824
         (593 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_012434452.1| PREDICTED: F-box/kelch-repeat protein At3g23...    62   2e-07

>ref|XP_012434452.1| PREDICTED: F-box/kelch-repeat protein At3g23880-like [Gossypium
           raimondii] gi|823197987|ref|XP_012434453.1| PREDICTED:
           F-box/kelch-repeat protein At3g23880-like [Gossypium
           raimondii] gi|763778548|gb|KJB45671.1| hypothetical
           protein B456_007G319500 [Gossypium raimondii]
          Length = 393

 Score = 62.4 bits (150), Expect = 2e-07
 Identities = 39/121 (32%), Positives = 61/121 (50%), Gaps = 3/121 (2%)
 Frame = -1

Query: 356 METILPSDLTLNILSRLPADSVLQCRQVLKTWKDLLRQPSYPRAHLLHQLSQINGNSFTS 177
           M   LP+++ L IL RLP  S+++CR V KTW  L+  PS+   HL   LS+ N      
Sbjct: 1   MSDYLPAEVILEILKRLPIKSLVKCRSVCKTWNSLICNPSFISTHLQASLSEPNNT---- 56

Query: 176 PSSHTTAGIPFGLLFFFSFTLERGNQLYYGEYDNQTRNKIRKINQPL---TVGKSVIGSC 6
                    PF LL  F    ++G + Y+  YDN   ++ +++  P+       +V+GSC
Sbjct: 57  ---------PFILLRCF----KKGKENYFLHYDNDDFDEFKQLQFPVFGCLSCSAVVGSC 103

Query: 5   N 3
           +
Sbjct: 104 H 104


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