BLASTX nr result

ID: Papaver29_contig00054037 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver29_contig00054037
         (487 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_013651915.1| PREDICTED: probable F-box protein At3g56670 ...    58   2e-06
ref|XP_009103998.1| PREDICTED: probable F-box protein At3g56670 ...    58   3e-06
emb|CDX67644.1| BnaA07g16840D [Brassica napus]                         58   3e-06

>ref|XP_013651915.1| PREDICTED: probable F-box protein At3g56670 [Brassica napus]
          Length = 383

 Score = 58.2 bits (139), Expect = 2e-06
 Identities = 45/152 (29%), Positives = 68/152 (44%)
 Frame = -1

Query: 460 IIDYKFDKNTRKCYLSLFDVDKSKRRIVRFKPETDYRVDNMEIKQSFNGLLLFCRCVKRN 281
           IID     N +KCYL+      S     R   E    +    ++Q   GL+L C  + RN
Sbjct: 82  IIDDFAAGNYKKCYLAF-----SSSTFPRNTNEVSVLLMPERMEQYIRGLIL-CWSISRN 135

Query: 280 SVYDYIVYNPITGRSVNLPVPDGIGLHNCEFCLGYDPVGENYKSVCFGNYDDKYFCKILT 101
                 +YNP T +  NLP     G+ +C F  GYDP+G  YK++       ++ C++ T
Sbjct: 136 KA---AIYNPTTRQCFNLPDTKIKGIGSCFF--GYDPLGNQYKALYIPLNYMEHVCQVFT 190

Query: 100 LGEFGRDSWRNLVKPGFGFNTPFSFVRNGVVF 5
           LG+     WR++      F        NGV++
Sbjct: 191 LGDPTATQWRSIQGVKSHFPMASVVCINGVIY 222


>ref|XP_009103998.1| PREDICTED: probable F-box protein At3g56670 [Brassica rapa]
          Length = 383

 Score = 57.8 bits (138), Expect = 3e-06
 Identities = 45/152 (29%), Positives = 68/152 (44%)
 Frame = -1

Query: 460 IIDYKFDKNTRKCYLSLFDVDKSKRRIVRFKPETDYRVDNMEIKQSFNGLLLFCRCVKRN 281
           IID     N +KC+L+      S   I R   E    +    + Q   GL+L C  + RN
Sbjct: 82  IIDDFAAGNYKKCFLAF-----SSSTIPRNTNEVSVLLMPERMNQYIRGLIL-CWSISRN 135

Query: 280 SVYDYIVYNPITGRSVNLPVPDGIGLHNCEFCLGYDPVGENYKSVCFGNYDDKYFCKILT 101
                 +YNP T +  NLP     G+ +C F  GYDP+G  YK++       ++ C++ T
Sbjct: 136 KA---AIYNPTTRQCFNLPDTKIKGIGSCFF--GYDPLGNQYKALYIPLNYMEHVCQVFT 190

Query: 100 LGEFGRDSWRNLVKPGFGFNTPFSFVRNGVVF 5
           LG+     WR++      F        NGV++
Sbjct: 191 LGDPTATQWRSIQGVKSHFPMASVVCINGVIY 222


>emb|CDX67644.1| BnaA07g16840D [Brassica napus]
          Length = 383

 Score = 57.8 bits (138), Expect = 3e-06
 Identities = 45/152 (29%), Positives = 68/152 (44%)
 Frame = -1

Query: 460 IIDYKFDKNTRKCYLSLFDVDKSKRRIVRFKPETDYRVDNMEIKQSFNGLLLFCRCVKRN 281
           IID     N +KCYL+      S     R   E    +    ++Q   GL+L C  + RN
Sbjct: 82  IIDDFGAGNYKKCYLAF-----SSSTFPRNTNEVSVLLMPERMEQYIRGLIL-CWSISRN 135

Query: 280 SVYDYIVYNPITGRSVNLPVPDGIGLHNCEFCLGYDPVGENYKSVCFGNYDDKYFCKILT 101
                 +YNP T +  NLP     G+ +C F  GYDP+G  YK++       ++ C++ T
Sbjct: 136 KA---AIYNPTTRQCFNLPDTKIKGIGSCFF--GYDPLGNQYKALYIPLNYMEHVCQVFT 190

Query: 100 LGEFGRDSWRNLVKPGFGFNTPFSFVRNGVVF 5
           LG+     WR++      F        NGV++
Sbjct: 191 LGDPTATQWRSIQGVKSHFPMASVVCINGVIY 222


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