BLASTX nr result
ID: Papaver29_contig00050872
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Papaver29_contig00050872
(516 letters)
Database: ./nr
77,306,371 sequences; 28,104,191,420 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006289922.1| hypothetical protein CARUB_v10003538mg [Caps... 61 3e-07
ref|NP_568185.1| mitochondrial transcription termination factor ... 60 8e-07
ref|XP_002871294.1| mitochondrial transcription termination fact... 59 1e-06
ref|XP_009133832.1| PREDICTED: uncharacterized protein LOC103858... 58 3e-06
ref|XP_010452758.1| PREDICTED: uncharacterized protein LOC104734... 57 4e-06
emb|CDX83317.1| BnaA03g21890D [Brassica napus] 57 4e-06
ref|XP_006397978.1| hypothetical protein EUTSA_v10001776mg, part... 57 4e-06
ref|XP_002520663.1| conserved hypothetical protein [Ricinus comm... 57 5e-06
ref|XP_010423158.1| PREDICTED: uncharacterized protein LOC104708... 57 7e-06
ref|XP_013734950.1| PREDICTED: uncharacterized protein LOC106438... 56 9e-06
ref|XP_010491409.1| PREDICTED: uncharacterized protein LOC104768... 56 9e-06
>ref|XP_006289922.1| hypothetical protein CARUB_v10003538mg [Capsella rubella]
gi|482558628|gb|EOA22820.1| hypothetical protein
CARUB_v10003538mg [Capsella rubella]
Length = 407
Score = 61.2 bits (147), Expect = 3e-07
Identities = 38/101 (37%), Positives = 59/101 (58%), Gaps = 3/101 (2%)
Frame = -1
Query: 510 AFMLHR*CMKHSEKKISMTMRYLVNQMRIAS---ARCPMIWHYSFNDLALYGGFLFTEFQ 340
AF H CM SE+KI+ TM Y VN+M +A A+CP++ +S + + T+
Sbjct: 301 AFKKHPHCMMLSERKINRTMEYFVNEMNLAPRSIAQCPVVLFFSL-EKRIIPRCSVTKVL 359
Query: 339 QLRGLIKDKIFLQTILHMGKESFLGKLVSKFEQEAPELLKV 217
+GL+K+ L ++L ++ FL KLV K+E+E PEL+ V
Sbjct: 360 VSKGLMKEDWSLTSLLVPVEQVFLEKLVIKYEEELPELMDV 400
>ref|NP_568185.1| mitochondrial transcription termination factor family protein
[Arabidopsis thaliana]
gi|13878065|gb|AAK44110.1|AF370295_1 unknown protein
[Arabidopsis thaliana] gi|6562304|emb|CAB62602.1|
putative protein [Arabidopsis thaliana]
gi|10176724|dbj|BAB09954.1| unnamed protein product
[Arabidopsis thaliana] gi|17104655|gb|AAL34216.1|
unknown protein [Arabidopsis thaliana]
gi|21592327|gb|AAM64278.1| unknown [Arabidopsis
thaliana] gi|332003836|gb|AED91219.1| mitochondrial
transcription termination factor family protein
[Arabidopsis thaliana]
Length = 405
Score = 59.7 bits (143), Expect = 8e-07
Identities = 37/101 (36%), Positives = 58/101 (57%), Gaps = 3/101 (2%)
Frame = -1
Query: 510 AFMLHR*CMKHSEKKISMTMRYLVNQMRIAS---ARCPMIWHYSFNDLALYGGFLFTEFQ 340
AF H CM SE+KI+ TM Y VN+M +A A+CP++ +S + + T+
Sbjct: 299 AFKKHPHCMMLSERKINRTMEYFVNEMNMAPRSIAQCPVVLFFSL-EKRIIPRCSVTKVL 357
Query: 339 QLRGLIKDKIFLQTILHMGKESFLGKLVSKFEQEAPELLKV 217
GL+K+ L ++L ++ FL KLV K+E+E PEL+ +
Sbjct: 358 VSNGLVKEDWSLTSLLVPVEKVFLEKLVIKYEEELPELMNL 398
>ref|XP_002871294.1| mitochondrial transcription termination factor family protein
[Arabidopsis lyrata subsp. lyrata]
gi|297317131|gb|EFH47553.1| mitochondrial transcription
termination factor family protein [Arabidopsis lyrata
subsp. lyrata]
Length = 404
Score = 58.9 bits (141), Expect = 1e-06
Identities = 37/101 (36%), Positives = 57/101 (56%), Gaps = 3/101 (2%)
Frame = -1
Query: 510 AFMLHR*CMKHSEKKISMTMRYLVNQMRIAS---ARCPMIWHYSFNDLALYGGFLFTEFQ 340
AF H CM SE+KI+ TM + VN+M +A A CP++ +S + + T+
Sbjct: 298 AFKKHPHCMMLSERKINRTMEFFVNEMNLAPRSIAECPVVLFFSL-EKRIIPRCSVTKVL 356
Query: 339 QLRGLIKDKIFLQTILHMGKESFLGKLVSKFEQEAPELLKV 217
GL+K+ L ++L ++ FL KLV K+E+E PEL+ V
Sbjct: 357 VSNGLVKEDWSLTSLLVPVEKVFLEKLVIKYEEELPELMDV 397
>ref|XP_009133832.1| PREDICTED: uncharacterized protein LOC103858260 [Brassica rapa]
Length = 419
Score = 57.8 bits (138), Expect = 3e-06
Identities = 36/101 (35%), Positives = 58/101 (57%), Gaps = 3/101 (2%)
Frame = -1
Query: 510 AFMLHR*CMKHSEKKISMTMRYLVNQMRIAS---ARCPMIWHYSFNDLALYGGFLFTEFQ 340
AF H CM SE+KI+ TM +LV +M++A A CP++ +S D + +
Sbjct: 310 AFKKHPHCMMLSERKINRTMEFLVEEMKMAPRSIAGCPVVLFFSL-DKRIIPRCSVVKVL 368
Query: 339 QLRGLIKDKIFLQTILHMGKESFLGKLVSKFEQEAPELLKV 217
+G++K+ L ++L ++ FL KLV K+E+E PEL+ V
Sbjct: 369 ASKGMVKEDWSLTSLLVPVEKVFLEKLVIKYEEELPELMDV 409
>ref|XP_010452758.1| PREDICTED: uncharacterized protein LOC104734807 [Camelina sativa]
Length = 420
Score = 57.4 bits (137), Expect = 4e-06
Identities = 36/101 (35%), Positives = 57/101 (56%), Gaps = 3/101 (2%)
Frame = -1
Query: 510 AFMLHR*CMKHSEKKISMTMRYLVNQMRIAS---ARCPMIWHYSFNDLALYGGFLFTEFQ 340
AF H CM SE+KI+ TM + VN+M +A A+CP++ +S + + +
Sbjct: 314 AFKKHPHCMMLSERKINRTMEFFVNEMNLAPRSIAQCPVVLFFSL-EKRIIPRCSVAKVL 372
Query: 339 QLRGLIKDKIFLQTILHMGKESFLGKLVSKFEQEAPELLKV 217
+GL+K+ L ++L ++ FL KLV K+E E PEL+ V
Sbjct: 373 VSKGLVKEDWSLTSLLVPVEKVFLEKLVFKYEDELPELMDV 413
>emb|CDX83317.1| BnaA03g21890D [Brassica napus]
Length = 414
Score = 57.4 bits (137), Expect = 4e-06
Identities = 36/101 (35%), Positives = 58/101 (57%), Gaps = 3/101 (2%)
Frame = -1
Query: 510 AFMLHR*CMKHSEKKISMTMRYLVNQMRIAS---ARCPMIWHYSFNDLALYGGFLFTEFQ 340
AF H CM SE+KI+ TM +LV +M++A A CP++ +S D + +
Sbjct: 307 AFKKHPHCMMLSERKINRTMEFLVEEMKMAPRSIAGCPVVLFFSL-DKRIIPRCSVVKVL 365
Query: 339 QLRGLIKDKIFLQTILHMGKESFLGKLVSKFEQEAPELLKV 217
+G++K+ L ++L ++ FL KLV K+E+E PEL+ V
Sbjct: 366 VSKGMVKEDWSLTSLLVPVEKVFLEKLVIKYEEELPELMDV 406
>ref|XP_006397978.1| hypothetical protein EUTSA_v10001776mg, partial [Eutrema
salsugineum] gi|557099051|gb|ESQ39431.1| hypothetical
protein EUTSA_v10001776mg, partial [Eutrema salsugineum]
Length = 362
Score = 57.4 bits (137), Expect = 4e-06
Identities = 36/101 (35%), Positives = 57/101 (56%), Gaps = 3/101 (2%)
Frame = -1
Query: 510 AFMLHR*CMKHSEKKISMTMRYLVNQMRIAS---ARCPMIWHYSFNDLALYGGFLFTEFQ 340
AF H CM SE+KI+ TM +LV +M +A A+CP++ +S D + +
Sbjct: 256 AFNKHPHCMMLSERKINTTMEFLVKEMNLAPRSIAKCPVVLFFSL-DKRIIPRCSVIKVL 314
Query: 339 QLRGLIKDKIFLQTILHMGKESFLGKLVSKFEQEAPELLKV 217
+G++K L ++L ++ FL KLV K+E+E PEL+ V
Sbjct: 315 ASKGMVKQDWSLTSLLVPVEKVFLEKLVIKYEEELPELMDV 355
>ref|XP_002520663.1| conserved hypothetical protein [Ricinus communis]
gi|223540048|gb|EEF41625.1| conserved hypothetical
protein [Ricinus communis]
Length = 377
Score = 57.0 bits (136), Expect = 5e-06
Identities = 36/103 (34%), Positives = 56/103 (54%), Gaps = 3/103 (2%)
Frame = -1
Query: 510 AFMLHR*CMKHSEKKISMTMRYLVNQMRIAS---ARCPMIWHYSFNDLALYGGFLFTEFQ 340
AF H CM SEKKI + M + VN+M + S A+CP++ +S + +
Sbjct: 267 AFKKHPHCMMLSEKKIMLAMDFFVNKMGLPSKVIAQCPVLLFFSLEKRIVPRCRVIRVLM 326
Query: 339 QLRGLIKDKIFLQTILHMGKESFLGKLVSKFEQEAPELLKVKE 211
+GL+K + L T+L ++ FL + V K+E+E P LL+V E
Sbjct: 327 N-KGLVKKDVSLATVLVPTEKCFLDRFVIKYEEEVPLLLRVYE 368
>ref|XP_010423158.1| PREDICTED: uncharacterized protein LOC104708312 [Camelina sativa]
Length = 401
Score = 56.6 bits (135), Expect = 7e-06
Identities = 35/101 (34%), Positives = 58/101 (57%), Gaps = 3/101 (2%)
Frame = -1
Query: 510 AFMLHR*CMKHSEKKISMTMRYLVNQMRI---ASARCPMIWHYSFNDLALYGGFLFTEFQ 340
AF H CM SE+KI+ TM + VN+M + + A+CP++ +S + + +
Sbjct: 295 AFKKHPHCMMLSERKINRTMEFFVNEMNLEPRSIAQCPVVLFFSL-EKRIIPRCSVAKVL 353
Query: 339 QLRGLIKDKIFLQTILHMGKESFLGKLVSKFEQEAPELLKV 217
+GL+K+ L ++L ++ FL KLV K+E+E PEL+ V
Sbjct: 354 VSKGLVKEDWSLTSLLVPVEKVFLEKLVFKYEEELPELMDV 394
>ref|XP_013734950.1| PREDICTED: uncharacterized protein LOC106438366 [Brassica napus]
Length = 415
Score = 56.2 bits (134), Expect = 9e-06
Identities = 35/101 (34%), Positives = 58/101 (57%), Gaps = 3/101 (2%)
Frame = -1
Query: 510 AFMLHR*CMKHSEKKISMTMRYLVNQMRIAS---ARCPMIWHYSFNDLALYGGFLFTEFQ 340
AF H CM SE+KI+ TM +LV +M++A A CP++ +S D + +
Sbjct: 308 AFKKHPHCMMLSERKINRTMEFLVEEMKMAPRSIAGCPVVLFFSL-DKRIIPRCSVVKVL 366
Query: 339 QLRGLIKDKIFLQTILHMGKESFLGKLVSKFEQEAPELLKV 217
+G++K+ L ++L ++ FL KLV K+++E PEL+ V
Sbjct: 367 VSKGMVKEDWSLTSLLVPVEKVFLEKLVIKYQEELPELMDV 407
>ref|XP_010491409.1| PREDICTED: uncharacterized protein LOC104768995 [Camelina sativa]
Length = 403
Score = 56.2 bits (134), Expect = 9e-06
Identities = 34/99 (34%), Positives = 57/99 (57%), Gaps = 3/99 (3%)
Frame = -1
Query: 510 AFMLHR*CMKHSEKKISMTMRYLVNQMRIAS---ARCPMIWHYSFNDLALYGGFLFTEFQ 340
AF H CM SE+KI+ TM + VN+M + + A+CP++ +S + + +
Sbjct: 297 AFKKHPHCMMLSERKINRTMEFFVNEMNLEARSIAQCPVVLFFSL-EKRIIPRCSVAKVL 355
Query: 339 QLRGLIKDKIFLQTILHMGKESFLGKLVSKFEQEAPELL 223
+GL+K+ L ++L ++ FL KLV K+E+E PEL+
Sbjct: 356 VSKGLVKEDWSLSSLLVPVEKVFLEKLVFKYEEELPELM 394