BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver29_contig00049928
         (601 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_010256861.1| PREDICTED: RNA polymerase II-associated fact...    62   2e-07
ref|XP_006426877.1| hypothetical protein CICLE_v10025066mg [Citr...    59   2e-06
ref|XP_006465692.1| PREDICTED: RNA polymerase II-associated fact...    59   3e-06

>ref|XP_010256861.1| PREDICTED: RNA polymerase II-associated factor 1 homolog [Nelumbo
           nucifera] gi|720003043|ref|XP_010256862.1| PREDICTED:
           RNA polymerase II-associated factor 1 homolog [Nelumbo
           nucifera] gi|720003046|ref|XP_010256863.1| PREDICTED:
           RNA polymerase II-associated factor 1 homolog [Nelumbo
           nucifera]
          Length = 734

 Score = 62.0 bits (149), Expect = 2e-07
 Identities = 38/67 (56%), Positives = 47/67 (70%), Gaps = 2/67 (2%)
 Frame = +1

Query: 4   VTVRNRPEVSAKELVKDSGDYTNSKGNYSSSKRGRSGNEDN-VRHHKSSRVQ-EMVNYSG 177
           VTVR RPEV+  E V++SG Y N K   SSSKRGR   +D  VRH+K +RVQ +M + SG
Sbjct: 669 VTVRCRPEVAVIE-VQESGGYENFKAGISSSKRGRLTTDDGLVRHNKGARVQDDMDHSSG 727

Query: 178 GEDEMSD 198
            ED+MSD
Sbjct: 728 AEDDMSD 734


>ref|XP_006426877.1| hypothetical protein CICLE_v10025066mg [Citrus clementina]
           gi|557528867|gb|ESR40117.1| hypothetical protein
           CICLE_v10025066mg [Citrus clementina]
           gi|641832760|gb|KDO51787.1| hypothetical protein
           CISIN_1g005794mg [Citrus sinensis]
          Length = 677

 Score = 58.9 bits (141), Expect = 2e-06
 Identities = 35/67 (52%), Positives = 41/67 (61%), Gaps = 1/67 (1%)
 Frame = +1

Query: 1   SVTVRNRPEVSAKELVKDSGDYTNSKGNYSSSKRGR-SGNEDNVRHHKSSRVQEMVNYSG 177
           S+ VR R  V+A EL K+ G Y+NSKGN SSSK GR    ED  R H  SR Q+    SG
Sbjct: 612 SIAVRRRANVTAIEL-KEQGAYSNSKGNSSSSKMGRVDSQEDLERSHNGSRQQDPYQSSG 670

Query: 178 GEDEMSD 198
            ED+M D
Sbjct: 671 AEDDMYD 677


>ref|XP_006465692.1| PREDICTED: RNA polymerase II-associated factor 1 homolog isoform X1
           [Citrus sinensis]
          Length = 576

 Score = 58.5 bits (140), Expect = 3e-06
 Identities = 35/67 (52%), Positives = 41/67 (61%), Gaps = 1/67 (1%)
 Frame = +1

Query: 1   SVTVRNRPEVSAKELVKDSGDYTNSKGNYSSSKRGR-SGNEDNVRHHKSSRVQEMVNYSG 177
           S+ VR R  V+A EL K+ G Y+NSKGN SSSK GR    ED  R H  SR Q+    SG
Sbjct: 511 SIAVRRRANVTAIEL-KEQGAYSNSKGNSSSSKMGRVDSQEDLERSHNGSRHQDPYQSSG 569

Query: 178 GEDEMSD 198
            ED+M D
Sbjct: 570 AEDDMYD 576