BLASTX nr result

ID: Papaver29_contig00049502 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver29_contig00049502
         (417 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CDP00838.1| unnamed protein product [Coffea canephora]             60   5e-07
ref|XP_010500708.1| PREDICTED: F-box protein At1g30790-like [Cam...    57   4e-06
ref|XP_010663484.1| PREDICTED: F-box protein At5g49610-like [Vit...    57   5e-06
emb|CAN77786.1| hypothetical protein VITISV_023232 [Vitis vinifera]    57   5e-06
ref|XP_003611119.2| F-box protein interaction domain protein [Me...    57   7e-06

>emb|CDP00838.1| unnamed protein product [Coffea canephora]
          Length = 811

 Score = 60.5 bits (145), Expect = 5e-07
 Identities = 35/82 (42%), Positives = 50/82 (60%), Gaps = 6/82 (7%)
 Frame = -2

Query: 359 SVNGLICLSDL-----KNRFCICNPMTREYVVLPE-RMGKSCGYYYLVGFGYLPSTDEYK 198
           S NGLICLS +     K +  I NP  REY +LP+ ++ K+C   Y  GFGY P+T  YK
Sbjct: 532 SCNGLICLSKISHSVKKCKLYIFNPQLREYTMLPKLKIYKTCEDVY--GFGYCPATGHYK 589

Query: 197 VVVVNQLKKEPEYAEVMVYTPG 132
           V+  +  K++P+ +E  V+T G
Sbjct: 590 VLRFHTTKRQPKTSEAQVHTIG 611


>ref|XP_010500708.1| PREDICTED: F-box protein At1g30790-like [Camelina sativa]
          Length = 274

 Score = 57.4 bits (137), Expect = 4e-06
 Identities = 32/86 (37%), Positives = 50/86 (58%), Gaps = 2/86 (2%)
 Frame = -2

Query: 371 LRTSSVNGLICLSDLKNRFCICNPMTREYVVLPERMG--KSCGYYYLVGFGYLPSTDEYK 198
           ++++SV G +C + ++ RF +CNP T +++VLPE     + C  +Y V  GY PS DEYK
Sbjct: 1   MQSNSVRGFVCCT-MERRFVVCNPTTTQFIVLPEDYNPIRRCEDFY-VYLGYDPSNDEYK 58

Query: 197 VVVVNQLKKEPEYAEVMVYTPGSGNG 120
           V+ +   +      E  V T G G+G
Sbjct: 59  VLRLEMAEFSDTPIEHSVCTLGGGSG 84


>ref|XP_010663484.1| PREDICTED: F-box protein At5g49610-like [Vitis vinifera]
           gi|731426091|ref|XP_010663485.1| PREDICTED: F-box
           protein At5g49610-like [Vitis vinifera]
          Length = 377

 Score = 57.0 bits (136), Expect = 5e-06
 Identities = 30/64 (46%), Positives = 40/64 (62%), Gaps = 2/64 (3%)
 Frame = -2

Query: 377 NFLRTSSVNGLICLS--DLKNRFCICNPMTREYVVLPERMGKSCGYYYLVGFGYLPSTDE 204
           N +  SS NGL+CL+  +  N   I NP+TR+Y+VLPE +  S  +  LVG GY P   +
Sbjct: 103 NLIVMSSCNGLLCLASEESPNPVIISNPITRKYIVLPESVNASYSFIQLVGLGYDPWNMK 162

Query: 203 YKVV 192
           YKVV
Sbjct: 163 YKVV 166


>emb|CAN77786.1| hypothetical protein VITISV_023232 [Vitis vinifera]
          Length = 377

 Score = 57.0 bits (136), Expect = 5e-06
 Identities = 30/64 (46%), Positives = 40/64 (62%), Gaps = 2/64 (3%)
 Frame = -2

Query: 377 NFLRTSSVNGLICLS--DLKNRFCICNPMTREYVVLPERMGKSCGYYYLVGFGYLPSTDE 204
           N +  SS NGL+CL+  +  N   I NP+TR+Y+VLPE +  S  +  LVG GY P   +
Sbjct: 103 NLIVMSSCNGLLCLASEESPNPVIISNPITRKYIVLPESVNASYSFIQLVGLGYDPWNMK 162

Query: 203 YKVV 192
           YKVV
Sbjct: 163 YKVV 166


>ref|XP_003611119.2| F-box protein interaction domain protein [Medicago truncatula]
           gi|657383858|gb|AES94077.2| F-box protein interaction
           domain protein [Medicago truncatula]
          Length = 472

 Score = 56.6 bits (135), Expect = 7e-06
 Identities = 41/115 (35%), Positives = 63/115 (54%), Gaps = 14/115 (12%)
 Frame = -2

Query: 380 ENFLRTSSVNGLICLSD--LKNRFCICNPMTREYVVLPERMGKSCGY---YYLVGFGYLP 216
           + F   +S NGL+CLS+  + +   ICNP+TRE+ +LPE    S  +       GFG+ P
Sbjct: 169 DKFGIVNSCNGLLCLSETSIGSPLVICNPVTREFTILPELTTTSDWFNSARVQAGFGFQP 228

Query: 215 STDEYKVVVV--------NQLKKEPEYAEVMVYTPGSGN-GHCEVTKRILFLNLL 78
            T+EYKV+++        N+L  E    E  ++T G+ +  + EV  +I FL LL
Sbjct: 229 KTNEYKVIIMWNKYVRRDNRLVFERVVLE--IHTLGTSSWRNVEVDPQISFLKLL 281


Top