BLASTX nr result
ID: Papaver29_contig00049194
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Papaver29_contig00049194
(1029 letters)
Database: ./nr
77,306,371 sequences; 28,104,191,420 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002265079.1| PREDICTED: pentatricopeptide repeat-containi... 422 e-115
ref|XP_007025291.1| Pentatricopeptide repeat (PPR-like) superfam... 389 e-105
gb|KNA17135.1| hypothetical protein SOVF_082980 [Spinacia oleracea] 377 e-101
ref|XP_012484752.1| PREDICTED: pentatricopeptide repeat-containi... 375 e-101
ref|XP_010665683.1| PREDICTED: pentatricopeptide repeat-containi... 368 4e-99
ref|XP_010529216.1| PREDICTED: pentatricopeptide repeat-containi... 367 1e-98
ref|XP_006283500.1| hypothetical protein CARUB_v10004552mg [Caps... 365 4e-98
ref|XP_010436490.1| PREDICTED: pentatricopeptide repeat-containi... 361 5e-97
ref|NP_193619.1| pentatricopeptide repeat-containing protein [Ar... 361 5e-97
ref|XP_006414048.1| hypothetical protein EUTSA_v10024877mg [Eutr... 360 8e-97
ref|XP_010439805.1| PREDICTED: pentatricopeptide repeat-containi... 359 2e-96
ref|XP_002867972.1| pentatricopeptide repeat-containing protein ... 358 4e-96
ref|XP_010943932.1| PREDICTED: pentatricopeptide repeat-containi... 355 3e-95
ref|XP_006358091.1| PREDICTED: pentatricopeptide repeat-containi... 353 1e-94
ref|XP_009764895.1| PREDICTED: pentatricopeptide repeat-containi... 352 2e-94
ref|XP_013719427.1| PREDICTED: pentatricopeptide repeat-containi... 351 5e-94
emb|CDO96870.1| unnamed protein product [Coffea canephora] 351 5e-94
ref|XP_009627120.1| PREDICTED: pentatricopeptide repeat-containi... 350 8e-94
ref|XP_009132265.1| PREDICTED: pentatricopeptide repeat-containi... 348 5e-93
ref|XP_013607492.1| PREDICTED: pentatricopeptide repeat-containi... 346 2e-92
>ref|XP_002265079.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18840
[Vitis vinifera]
Length = 536
Score = 422 bits (1086), Expect = e-115
Identities = 204/322 (63%), Positives = 258/322 (80%)
Frame = -2
Query: 968 MAFSISQPSIISFTELANSLSEINQAHAHMLKTGLFHDSYAASRLXXXXXXXXXXSNPKT 789
M+ S P I+SF E+A S+SE++QAHAH+LK+GL H ++AASRL + +
Sbjct: 1 MSSSFPPPPILSFAEMATSISELHQAHAHILKSGLIHSTFAASRLIASVSTNS---HAQA 57
Query: 788 LTHASSVFSRIPNPSSYLWNTMIRSYANSCNPEESLLLFHQMLYDSFYPDKFTYTFALKA 609
+ +A S+FSRIPNP+SY+WNT+IR+YANS PE +L +FHQML+ S PDK+T+TFALK+
Sbjct: 58 IPYAHSIFSRIPNPNSYMWNTIIRAYANSPTPEAALTIFHQMLHASVLPDKYTFTFALKS 117
Query: 608 CSFLLGIEEGRQIHGQILKTGNGFDCYIQNSLINLYARTGYFDNAYLLLDRMIQKDVISW 429
C G+EEGRQIHG +LKTG G D +IQN+LI+LYA G ++A LLDRM+++DV+SW
Sbjct: 118 CGSFSGVEEGRQIHGHVLKTGLGDDLFIQNTLIHLYASCGCIEDARHLLDRMLERDVVSW 177
Query: 428 NAILSAYTERGLMENARNLFEEMPDKNVESWNFMISGYVGVELVEEARILFDEMPLKDVV 249
NA+LSAY ERGLME A +LF+EM ++NVESWNFMISGYVGV L+EEAR +F E P+K+VV
Sbjct: 178 NALLSAYAERGLMELACHLFDEMTERNVESWNFMISGYVGVGLLEEARRVFGETPVKNVV 237
Query: 248 SWNALITGYAHSNQFGQVLKLFEDMQFANVKPDNYTLVNVLSACAQFGALKQGEWIHAYI 69
SWNA+ITGY+H+ +F +VL LFEDMQ A VKPDN TLV+VLSACA GAL QGEW+HAYI
Sbjct: 238 SWNAMITGYSHAGRFSEVLVLFEDMQHAGVKPDNCTLVSVLSACAHVGALSQGEWVHAYI 297
Query: 68 DKNGINIHGFLATAFVDMYSKC 3
DKNGI+I GF+ATA VDMYSKC
Sbjct: 298 DKNGISIDGFVATALVDMYSKC 319
Score = 87.8 bits (216), Expect = 1e-14
Identities = 49/178 (27%), Positives = 89/178 (50%), Gaps = 4/178 (2%)
Frame = -2
Query: 788 LTHASSVFSRIPNPSSYLWNTMIRSYANSCNPEESLLLFHQMLYDSFYPDKFTYTFALKA 609
L A VF P + WN MI Y+++ E L+LF M + PD T L A
Sbjct: 221 LEEARRVFGETPVKNVVSWNAMITGYSHAGRFSEVLVLFEDMQHAGVKPDNCTLVSVLSA 280
Query: 608 CSFLLGIEEGRQIHGQILKTGNGFDCYIQNSLINLYARTGYFDNAYLLLDRMIQKDVISW 429
C+ + + +G +H I K G D ++ +L+++Y++ G + A + + ++KD+ +W
Sbjct: 281 CAHVGALSQGEWVHAYIDKNGISIDGFVATALVDMYSKCGSIEKALEVFNSCLRKDISTW 340
Query: 428 NAILSAYTERGLMENARNLFEEMP----DKNVESWNFMISGYVGVELVEEARILFDEM 267
N+I+S + G ++A +F EM N ++ ++S L++E R +F+ M
Sbjct: 341 NSIISGLSTHGSGQHALQIFSEMLVEGFKPNEVTFVCVLSACSRAGLLDEGREMFNLM 398
>ref|XP_007025291.1| Pentatricopeptide repeat (PPR-like) superfamily protein, putative
isoform 1 [Theobroma cacao]
gi|590623325|ref|XP_007025292.1| Pentatricopeptide
repeat (PPR-like) superfamily protein, putative isoform
1 [Theobroma cacao] gi|590623329|ref|XP_007025293.1|
Pentatricopeptide repeat (PPR-like) superfamily protein,
putative isoform 1 [Theobroma cacao]
gi|590623333|ref|XP_007025294.1| Pentatricopeptide
repeat (PPR-like) superfamily protein, putative isoform
1 [Theobroma cacao] gi|590623336|ref|XP_007025295.1|
Pentatricopeptide repeat (PPR-like) superfamily protein,
putative isoform 1 [Theobroma cacao]
gi|508780657|gb|EOY27913.1| Pentatricopeptide repeat
(PPR-like) superfamily protein, putative isoform 1
[Theobroma cacao] gi|508780658|gb|EOY27914.1|
Pentatricopeptide repeat (PPR-like) superfamily protein,
putative isoform 1 [Theobroma cacao]
gi|508780659|gb|EOY27915.1| Pentatricopeptide repeat
(PPR-like) superfamily protein, putative isoform 1
[Theobroma cacao] gi|508780660|gb|EOY27916.1|
Pentatricopeptide repeat (PPR-like) superfamily protein,
putative isoform 1 [Theobroma cacao]
gi|508780661|gb|EOY27917.1| Pentatricopeptide repeat
(PPR-like) superfamily protein, putative isoform 1
[Theobroma cacao]
Length = 535
Score = 389 bits (1000), Expect = e-105
Identities = 192/322 (59%), Positives = 245/322 (76%)
Frame = -2
Query: 968 MAFSISQPSIISFTELANSLSEINQAHAHMLKTGLFHDSYAASRLXXXXXXXXXXSNPKT 789
M+ ++SQP I+ FTE+ANS+SEI QAHAH+LKTGLF++ AS +PKT
Sbjct: 1 MSGTLSQPPILYFTEMANSVSEIQQAHAHLLKTGLFYNHPLASN--KLISFAVNNPDPKT 58
Query: 788 LTHASSVFSRIPNPSSYLWNTMIRSYANSCNPEESLLLFHQMLYDSFYPDKFTYTFALKA 609
L++A SVF+ NP+SY +N++IR+YANS P+ +L LF QML +PDK+++TF LKA
Sbjct: 59 LSYAHSVFTHTTNPNSYSYNSLIRAYANSHTPQNALSLFRQMLQGPVFPDKYSFTFVLKA 118
Query: 608 CSFLLGIEEGRQIHGQILKTGNGFDCYIQNSLINLYARTGYFDNAYLLLDRMIQKDVISW 429
C+ G++EGRQIHG +L+ G GFD ++ N+LI++Y + GYF A LLDRM ++D +SW
Sbjct: 119 CAGFGGVQEGRQIHGLVLRMGIGFDVFVANTLIHVYGKGGYFGVARSLLDRMPKRDAVSW 178
Query: 428 NAILSAYTERGLMENARNLFEEMPDKNVESWNFMISGYVGVELVEEARILFDEMPLKDVV 249
NA+LSAY E G + A LFEEM ++NVESWNFMISGY+ LVEEAR +F MP+K+VV
Sbjct: 179 NALLSAYIETGYIRLASGLFEEMEERNVESWNFMISGYLSAGLVEEARSVFYRMPVKNVV 238
Query: 248 SWNALITGYAHSNQFGQVLKLFEDMQFANVKPDNYTLVNVLSACAQFGALKQGEWIHAYI 69
SWNALITGYAH++ FG+VL LFEDMQ VKPDN TLVNVLSACA GAL QGEWIH+YI
Sbjct: 239 SWNALITGYAHTSCFGEVLVLFEDMQREKVKPDNCTLVNVLSACAHLGALGQGEWIHSYI 298
Query: 68 DKNGINIHGFLATAFVDMYSKC 3
DKN I I+G++ATA VDMYSKC
Sbjct: 299 DKNAIGINGYIATALVDMYSKC 320
Score = 90.9 bits (224), Expect = 2e-15
Identities = 67/244 (27%), Positives = 114/244 (46%), Gaps = 11/244 (4%)
Frame = -2
Query: 779 ASSVFSRIPNPSSYLWNTMIRSYANSCNPEESLLLFHQMLYDSFYPDKFTYTFALKACSF 600
A SVF R+P + WN +I YA++ E L+LF M + PD T L AC+
Sbjct: 225 ARSVFYRMPVKNVVSWNALITGYAHTSCFGEVLVLFEDMQREKVKPDNCTLVNVLSACAH 284
Query: 599 LLGIEEGRQIHGQILKTGNGFDCYIQNSLINLYARTGYFDNAYLLLDRMIQKDVISWNAI 420
L + +G IH I K G + YI +L+++Y++ G D A + +KD+ +WN+I
Sbjct: 285 LGALGQGEWIHSYIDKNAIGINGYIATALVDMYSKCGNIDKALYVFRNASRKDISTWNSI 344
Query: 419 LSAYTERGLMENARNLFEEMP----DKNVESWNFMISGYVGVELVEEA----RILFDEMP 264
+ GL E+A +F EM + N ++ ++S L+ E +I+ D+
Sbjct: 345 IVGLGMHGLGEHALEIFSEMLVNGFEPNEVTFIGLLSACSRAGLLNEGHHIFQIMVDDYG 404
Query: 263 LKDVVSWNALITGYAHSNQFGQVLKLFEDMQFANVKPDNYTLV---NVLSACAQFGALKQ 93
++ + + + GQV L E + +P V ++LSAC + G ++
Sbjct: 405 IQPTIEHFGCMV-----DLLGQVGLLEEALDLVKKRPLKEAPVLWESLLSACKKHGNVEM 459
Query: 92 GEWI 81
E +
Sbjct: 460 AEHV 463
>gb|KNA17135.1| hypothetical protein SOVF_082980 [Spinacia oleracea]
Length = 534
Score = 377 bits (967), Expect = e-101
Identities = 186/316 (58%), Positives = 238/316 (75%), Gaps = 1/316 (0%)
Frame = -2
Query: 947 PSIISFTELANSLSEINQAHAHMLKTGLFHDSYAASRLXXXXXXXXXXSNPKTLTHASSV 768
P+I+SFTE A SL+EI QAHA +LKTGL +D++ ASRL NP+T+ +A S+
Sbjct: 9 PAILSFTEKATSLTEIQQAHAQLLKTGLVNDTFTASRLVAFAYTNP---NPQTVAYAHSI 65
Query: 767 FSRIPNPSSYLWNTMIRSYANSCNPEESLLLFHQMLYDSFYPDKFTYTFALKACSFLLGI 588
FS++ NP+S+ WN+MIR+YANS NP+ +L LF QML S PDK+T TF +KACS G+
Sbjct: 66 FSQLSNPNSFTWNSMIRAYANSPNPQNALHLFTQMLGTSVEPDKYTSTFLIKACSAFCGL 125
Query: 587 EEGRQIHGQILKTGN-GFDCYIQNSLINLYARTGYFDNAYLLLDRMIQKDVISWNAILSA 411
+EG+Q+HG + K D Y+QN+LI++YA G F+ A +LD+M Q+DVISWNA+LS
Sbjct: 126 DEGQQVHGHVAKRREIREDVYVQNTLISMYANCGCFEVARNVLDKMPQRDVISWNALLSV 185
Query: 410 YTERGLMENARNLFEEMPDKNVESWNFMISGYVGVELVEEARILFDEMPLKDVVSWNALI 231
Y ERG+M++A LF EM D+NVESWNFM+SGY + LVEEAR FD++P+KDVVSWNA+I
Sbjct: 186 YVERGMMDSAHLLFHEMEDRNVESWNFMVSGYAKLGLVEEARRAFDQIPVKDVVSWNAII 245
Query: 230 TGYAHSNQFGQVLKLFEDMQFANVKPDNYTLVNVLSACAQFGALKQGEWIHAYIDKNGIN 51
+GYA F +VL LF++M +KPD+YTLVNVLSACA GAL QGEW H YIDKNGI+
Sbjct: 246 SGYADVGGFSEVLVLFQNMLSEGIKPDSYTLVNVLSACANLGALSQGEWTHLYIDKNGIS 305
Query: 50 IHGFLATAFVDMYSKC 3
I GFLATA VDMYSKC
Sbjct: 306 IEGFLATALVDMYSKC 321
Score = 81.6 bits (200), Expect = 9e-13
Identities = 61/227 (26%), Positives = 101/227 (44%), Gaps = 43/227 (18%)
Frame = -2
Query: 779 ASSVFSRIPNPSSYLWNTMIRSYANSCNPEESLLLFHQMLYDSFYPDKFTYTFALKACSF 600
A F +IP WN +I YA+ E L+LF ML + PD +T L AC+
Sbjct: 226 ARRAFDQIPVKDVVSWNAIISGYADVGGFSEVLVLFQNMLSEGIKPDSYTLVNVLSACAN 285
Query: 599 LLGIEEGRQIHGQILKTGNGFDCYIQNSLINLYARTGYFDNAYLLLDRMIQKDVISWNAI 420
L + +G H I K G + ++ +L+++Y++ G A + D ++KDV +WN++
Sbjct: 286 LGALSQGEWTHLYIDKNGISIEGFLATALVDMYSKCGEITKALKVFDNALKKDVSTWNSM 345
Query: 419 LSAYTERGLMENARNLFEEMPDKN------------------------VESWNFMISGYV 312
+ + G + A +F +M + + +E +N MI Y
Sbjct: 346 IGGLSVNGYGKEAVGIFRKMVEDDCKPNEITFVNTLSACSHAGLLIDGLEIFNIMIHKY- 404
Query: 311 GVE-----------------LVEEAR-ILFDEMPLKD-VVSWNALIT 228
G+E L+EEA+ IL E+P KD V W +L++
Sbjct: 405 GIEPTIEHCGCVIDLLGRAGLLEEAKEILKKEIPGKDSPVLWQSLLS 451
>ref|XP_012484752.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18840
[Gossypium raimondii] gi|763767696|gb|KJB34911.1|
hypothetical protein B456_006G090000 [Gossypium
raimondii]
Length = 534
Score = 375 bits (963), Expect = e-101
Identities = 185/324 (57%), Positives = 250/324 (77%), Gaps = 2/324 (0%)
Frame = -2
Query: 968 MAFSISQPSIISFTELANSLSEINQAHAHMLKTGLF-HDSYAASRLXXXXXXXXXXSNPK 792
M+ ++SQ I+ FTE+A+S+S+I+QAHAH+LKTG+F ++++ +++L +P
Sbjct: 1 MSGTLSQLPILPFTEMASSISQIHQAHAHLLKTGVFPNNTFVSNKLISFAVSNP---DPI 57
Query: 791 TLTHASSVFSRIPNPSSYLWNTMIRSYANSCNPEESLLLFHQMLYDS-FYPDKFTYTFAL 615
TL++A SVF+ I +P+S+ +N++IR+YANS PE +L LF QML PDK+++TFAL
Sbjct: 58 TLSYAHSVFTHITDPNSFSYNSLIRAYANSRTPENALFLFRQMLKGGPVLPDKYSFTFAL 117
Query: 614 KACSFLLGIEEGRQIHGQILKTGNGFDCYIQNSLINLYARTGYFDNAYLLLDRMIQKDVI 435
KAC+ G+EEG QIHG LK G GFD ++ N+LI++Y ++G+F A LLDRM +DV+
Sbjct: 118 KACAGFCGVEEGMQIHGLALKLGIGFDIFVANTLIHVYGKSGHFGFARSLLDRMADRDVV 177
Query: 434 SWNAILSAYTERGLMENARNLFEEMPDKNVESWNFMISGYVGVELVEEARILFDEMPLKD 255
SWNA+LSAY E G + AR LF+EM ++NVESWNFMISGY+ L+EEA+ +FD MPLKD
Sbjct: 178 SWNALLSAYIETGFIRLARGLFDEMDERNVESWNFMISGYLSSGLLEEAKSVFDSMPLKD 237
Query: 254 VVSWNALITGYAHSNQFGQVLKLFEDMQFANVKPDNYTLVNVLSACAQFGALKQGEWIHA 75
VVSWNA+ITGYAH+++F +VL+LFEDMQ V+PD TLVNVLSACA GAL QGEWIH
Sbjct: 238 VVSWNAIITGYAHASRFDEVLELFEDMQREEVRPDTCTLVNVLSACAHLGALGQGEWIHG 297
Query: 74 YIDKNGINIHGFLATAFVDMYSKC 3
YIDKNGI+ +GF+ATA VDM+SKC
Sbjct: 298 YIDKNGIDTNGFIATALVDMHSKC 321
Score = 85.5 bits (210), Expect = 6e-14
Identities = 60/244 (24%), Positives = 110/244 (45%), Gaps = 8/244 (3%)
Frame = -2
Query: 788 LTHASSVFSRIPNPSSYLWNTMIRSYANSCNPEESLLLFHQMLYDSFYPDKFTYTFALKA 609
L A SVF +P WN +I YA++ +E L LF M + PD T L A
Sbjct: 223 LEEAKSVFDSMPLKDVVSWNAIITGYAHASRFDEVLELFEDMQREEVRPDTCTLVNVLSA 282
Query: 608 CSFLLGIEEGRQIHGQILKTGNGFDCYIQNSLINLYARTGYFDNAYLLLDRMIQKDVISW 429
C+ L + +G IHG I K G + +I +L++++++ G D A + +KD+ +W
Sbjct: 283 CAHLGALGQGEWIHGYIDKNGIDTNGFIATALVDMHSKCGNIDKAVNVFRNASKKDISTW 342
Query: 428 NAILSAYTERGLMENARNLFEEMP----DKNVESWNFMISGYVGVELVEEA----RILFD 273
N+I+ G E A F EM + N ++ +++ + E +++ D
Sbjct: 343 NSIIVGLGMHGYGETALETFSEMLMEGFEPNEVTFIAVLTACSRSRFLNEGCKMFKLMVD 402
Query: 272 EMPLKDVVSWNALITGYAHSNQFGQVLKLFEDMQFANVKPDNYTLVNVLSACAQFGALKQ 93
+ ++ + + Q G + + E ++ +K + ++LSAC G +K
Sbjct: 403 DYGIEPAIEHYGCMVDLL--GQVGLLEEALELVETRQLKEAHVLWESLLSACKNHGNVKM 460
Query: 92 GEWI 81
E++
Sbjct: 461 AEYV 464
>ref|XP_010665683.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18840
[Beta vulgaris subsp. vulgaris]
gi|870843485|gb|KMS96647.1| hypothetical protein
BVRB_8g201100 [Beta vulgaris subsp. vulgaris]
Length = 481
Score = 368 bits (945), Expect = 4e-99
Identities = 182/317 (57%), Positives = 238/317 (75%), Gaps = 2/317 (0%)
Frame = -2
Query: 947 PSIISFTELANSLSEINQAHAHMLKTGLFHDSYAASRLXXXXXXXXXXSNPKTLTHASSV 768
P+I SF E +S+SE+ QAH ++K GL +DSY ASRL N +T+++A S+
Sbjct: 9 PAISSFIEQTSSISELQQAHGQLIKNGLINDSYTASRLIAFACTNP---NLQTISYAHSI 65
Query: 767 FSRIPNPSSYLWNTMIRSYANSCNPEESLLLFHQMLYDSFYPDKFTYTFALKACSFLLGI 588
FS + NP+S+ WN+M+R+YANS NP+ +LL+F QML S PDK+TY F +KACS G+
Sbjct: 66 FSHLQNPNSFTWNSMMRAYANSSNPQNALLVFTQMLETSVVPDKYTYPFVIKACSAFGGL 125
Query: 587 EEGRQIHGQILKTGNGFDC-YIQNSLINLYARTGYFDNAYLLLDRMIQKDVISWNAILSA 411
EG+Q+H Q+ K D Y+QN+LI++YA GYF++A LLD+M Q+DVISWNA+L+A
Sbjct: 126 NEGQQVHAQVTKRREMVDDKYVQNTLISMYANCGYFESARNLLDKMPQRDVISWNAMLAA 185
Query: 410 YTERGLMENARNLFEEMPDKNVESWNFMISGYVGVELVEEARILFDEMPLKDVVSWNALI 231
YTERGLM+ A+ LF EM ++NVESWNFM+SGY + LVEEAR++FD++P+KDVVSWNA+I
Sbjct: 186 YTERGLMDAAQVLFCEMEERNVESWNFMVSGYARLGLVEEARLMFDDIPVKDVVSWNAII 245
Query: 230 TGYAHSNQFGQVLKLFEDMQFAN-VKPDNYTLVNVLSACAQFGALKQGEWIHAYIDKNGI 54
+GYA F +VL LF++M N +KPD YTLV VLSAC+ GAL +GEWIH YIDKNGI
Sbjct: 246 SGYADVGGFNEVLLLFQNMVGENIIKPDKYTLVYVLSACSNLGALSRGEWIHLYIDKNGI 305
Query: 53 NIHGFLATAFVDMYSKC 3
I GFLATA VDMYSKC
Sbjct: 306 GIEGFLATALVDMYSKC 322
Score = 81.6 bits (200), Expect = 9e-13
Identities = 45/141 (31%), Positives = 73/141 (51%), Gaps = 1/141 (0%)
Frame = -2
Query: 779 ASSVFSRIPNPSSYLWNTMIRSYANSCNPEESLLLFHQMLYDSFY-PDKFTYTFALKACS 603
A +F IP WN +I YA+ E LLLF M+ ++ PDK+T + L ACS
Sbjct: 226 ARLMFDDIPVKDVVSWNAIISGYADVGGFNEVLLLFQNMVGENIIKPDKYTLVYVLSACS 285
Query: 602 FLLGIEEGRQIHGQILKTGNGFDCYIQNSLINLYARTGYFDNAYLLLDRMIQKDVISWNA 423
L + G IH I K G G + ++ +L+++Y++ G A + QKD+ +WN+
Sbjct: 286 NLGALSRGEWIHLYIDKNGIGIEGFLATALVDMYSKCGETRKALEVFGTTAQKDITTWNS 345
Query: 422 ILSAYTERGLMENARNLFEEM 360
++ + GL + A +F +M
Sbjct: 346 MIGGLSINGLGQEAVGIFHKM 366
Score = 66.2 bits (160), Expect = 4e-08
Identities = 67/273 (24%), Positives = 112/273 (41%), Gaps = 42/273 (15%)
Frame = -2
Query: 782 HASSVFSRIPNPSSYLWNTMIRSYANSCNPEESLLLFHQMLYDSFYPDKFTYTF-ALKAC 606
HA R Y+ NT+I YAN E + L +M P + ++ A+ A
Sbjct: 132 HAQVTKRREMVDDKYVQNTLISMYANCGYFESARNLLDKM------PQRDVISWNAMLAA 185
Query: 605 SFLLGIEEGRQIHGQILKTGNGFDCYIQNSLINLYARTGYFDNAYLLLDRMIQKDVISWN 426
G+ + Q+ ++ N N +++ YAR G + A L+ D + KDV+SWN
Sbjct: 186 YTERGLMDAAQVLFCEMEERN---VESWNFMVSGYARLGLVEEARLMFDDIPVKDVVSWN 242
Query: 425 AILSAYTERGLMENARNLFEEMPDKNV-----------------------ESWNFM---- 327
AI+S Y + G LF+ M +N+ W +
Sbjct: 243 AIISGYADVGGFNEVLLLFQNMVGENIIKPDKYTLVYVLSACSNLGALSRGEWIHLYIDK 302
Query: 326 ----ISGYVGVELVE---------EARILFDEMPLKDVVSWNALITGYAHSNQFGQVLKL 186
I G++ LV+ +A +F KD+ +WN++I G + + + + +
Sbjct: 303 NGIGIEGFLATALVDMYSKCGETRKALEVFGTTAQKDITTWNSMIGGLSINGLGQEAVGI 362
Query: 185 FEDMQFAN-VKPDNYTLVNVLSACAQFGALKQG 90
F M + P+ T +N+LSAC+ G L G
Sbjct: 363 FHKMLNDDYATPNEITFMNILSACSHAGLLIDG 395
>ref|XP_010529216.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18840
[Tarenaya hassleriana] gi|729308341|ref|XP_010529217.1|
PREDICTED: pentatricopeptide repeat-containing protein
At4g18840 [Tarenaya hassleriana]
gi|729308344|ref|XP_010529218.1| PREDICTED:
pentatricopeptide repeat-containing protein At4g18840
[Tarenaya hassleriana] gi|729308347|ref|XP_010529219.1|
PREDICTED: pentatricopeptide repeat-containing protein
At4g18840 [Tarenaya hassleriana]
gi|729308350|ref|XP_010529220.1| PREDICTED:
pentatricopeptide repeat-containing protein At4g18840
[Tarenaya hassleriana] gi|729308353|ref|XP_010529221.1|
PREDICTED: pentatricopeptide repeat-containing protein
At4g18840 [Tarenaya hassleriana]
gi|729308356|ref|XP_010529222.1| PREDICTED:
pentatricopeptide repeat-containing protein At4g18840
[Tarenaya hassleriana] gi|729308359|ref|XP_010529224.1|
PREDICTED: pentatricopeptide repeat-containing protein
At4g18840 [Tarenaya hassleriana]
gi|729308362|ref|XP_010529225.1| PREDICTED:
pentatricopeptide repeat-containing protein At4g18840
[Tarenaya hassleriana] gi|729308365|ref|XP_010529226.1|
PREDICTED: pentatricopeptide repeat-containing protein
At4g18840 [Tarenaya hassleriana]
Length = 534
Score = 367 bits (941), Expect = 1e-98
Identities = 175/322 (54%), Positives = 240/322 (74%)
Frame = -2
Query: 968 MAFSISQPSIISFTELANSLSEINQAHAHMLKTGLFHDSYAASRLXXXXXXXXXXSNPKT 789
M+ S SI+SFTE A SLSEI QAHA+MLKTG+F D+++AS+L +P T
Sbjct: 1 MSACSSSSSILSFTEKAESLSEIQQAHAYMLKTGIFRDAFSASKLIAFSAVNP---DPVT 57
Query: 788 LTHASSVFSRIPNPSSYLWNTMIRSYANSCNPEESLLLFHQMLYDSFYPDKFTYTFALKA 609
+++A S+ R+ NP+S+ +N++IR+YANS PE +L +F +ML PDK+++TF LKA
Sbjct: 58 VSYARSILRRVENPNSFSYNSVIRAYANSSTPETALDVFREMLLGPVLPDKYSFTFVLKA 117
Query: 608 CSFLLGIEEGRQIHGQILKTGNGFDCYIQNSLINLYARTGYFDNAYLLLDRMIQKDVISW 429
C+ G EEGRQIHG LKTG G D +++N+L+N+Y R+G+F+ A+ +LD+M ++D +SW
Sbjct: 118 CAGFEGYEEGRQIHGLFLKTGTGPDVFVENTLVNVYGRSGHFELAHKVLDKMPERDAVSW 177
Query: 428 NAILSAYTERGLMENARNLFEEMPDKNVESWNFMISGYVGVELVEEARILFDEMPLKDVV 249
N++LS Y ++GL+E AR LF+EM ++N+ESWNFMISGY+ LV+EA LFD MP KDVV
Sbjct: 178 NSLLSVYLDKGLVETARELFDEMEERNLESWNFMISGYMASGLVKEAAELFDAMPCKDVV 237
Query: 248 SWNALITGYAHSNQFGQVLKLFEDMQFANVKPDNYTLVNVLSACAQFGALKQGEWIHAYI 69
SWN ++TGYAH+ + +VL+LF ++ + +PD TLVNVLSACA GAL QGEW+H +I
Sbjct: 238 SWNVMVTGYAHAGLYSEVLELFREILNSEDEPDGCTLVNVLSACANLGALNQGEWVHVHI 297
Query: 68 DKNGINIHGFLATAFVDMYSKC 3
DK GI I GFLATA VDMYSKC
Sbjct: 298 DKQGIIIDGFLATALVDMYSKC 319
Score = 89.4 bits (220), Expect = 4e-15
Identities = 67/241 (27%), Positives = 113/241 (46%), Gaps = 8/241 (3%)
Frame = -2
Query: 779 ASSVFSRIPNPSSYLWNTMIRSYANSCNPEESLLLFHQMLYDSFYPDKFTYTFALKACSF 600
A+ +F +P WN M+ YA++ E L LF ++L PD T L AC+
Sbjct: 224 AAELFDAMPCKDVVSWNVMVTGYAHAGLYSEVLELFREILNSEDEPDGCTLVNVLSACAN 283
Query: 599 LLGIEEGRQIHGQILKTGNGFDCYIQNSLINLYARTGYFDNAYLLLDRMIQKDVISWNAI 420
L + +G +H I K G D ++ +L+++Y++ G D A + ++KDV +WN++
Sbjct: 284 LGALNQGEWVHVHIDKQGIIIDGFLATALVDMYSKCGKIDKALEVFRATLRKDVSTWNSM 343
Query: 419 LSAYTERGLMENARNLFEEMPDKNVESWNFMISGYVG----VELVEEARILFDEMPLKDV 252
+S + G + A +F EM + E N G + L++E R LF M K V
Sbjct: 344 ISGLSIHGFGKVALGIFSEMLLEGFEPNNVTFVGVLSACSHAGLLDEGRELFGMM--KRV 401
Query: 251 VSWNALITGY-AHSNQFGQVLKLFEDMQFANVKPDN---YTLVNVLSACAQFGALKQGEW 84
+ Y + FG++ K+ E + + P L ++L AC +FG ++ E
Sbjct: 402 YGIEPTVEHYGCMVDLFGRMGKVEEAEELVSKIPPESAPVLLESLLGACKRFGHMEMAER 461
Query: 83 I 81
I
Sbjct: 462 I 462
>ref|XP_006283500.1| hypothetical protein CARUB_v10004552mg [Capsella rubella]
gi|482552205|gb|EOA16398.1| hypothetical protein
CARUB_v10004552mg [Capsella rubella]
Length = 537
Score = 365 bits (936), Expect = 4e-98
Identities = 176/327 (53%), Positives = 239/327 (73%), Gaps = 1/327 (0%)
Frame = -2
Query: 980 LSITMAFSISQPSIISFTELANSLSEINQAHAHMLKTGLFHDSYAASRLXXXXXXXXXXS 801
+S+ + S I+SFTE A SLSEI QAHA MLKTGL D+Y+AS+L
Sbjct: 1 MSVVCSLSTPVVPILSFTERAKSLSEIQQAHAFMLKTGLSQDTYSASKLIAFAVTNP--- 57
Query: 800 NPKTLTHASSVFSRIPNPSSYLWNTMIRSYANSCNPEESLLLFHQMLYDSFYPDKFTYTF 621
PKT+++A S+ +RI +P+ + N++IR+YANS PE +L++F ML +PDK+++TF
Sbjct: 58 EPKTVSYAHSILNRIESPNGFTHNSVIRAYANSSTPEMALVVFRDMLLGPVFPDKYSFTF 117
Query: 620 ALKACSFLLGIEEGRQIHGQILKTGNGFDCYIQNSLINLYARTGYFDNAYLLLDRMIQKD 441
LKAC+ G EEGRQIHG +K+G D +++N+L+N+Y R+GYF+ A +LD+M +D
Sbjct: 118 VLKACAAFSGFEEGRQIHGLFMKSGLMTDVFVENTLVNVYGRSGYFEIARKVLDKMPVRD 177
Query: 440 VISWNAILSAYTERGLMENARNLFEEMPDKNVESWNFMISGYVGVELVEEARILFDEMPL 261
+SWN++LSAY E+GL+E AR LF+EM ++NVESWNFMISGY LV+EA+ +FD MP+
Sbjct: 178 AVSWNSLLSAYLEKGLVEEARALFDEMEERNVESWNFMISGYAAAGLVKEAKEIFDSMPV 237
Query: 260 KDVVSWNALITGYAHSNQFGQVLKLFEDM-QFANVKPDNYTLVNVLSACAQFGALKQGEW 84
KDVVSWNA++T YAH + +VL++F +M + KPD +TLVNVLSACA G+L QGEW
Sbjct: 238 KDVVSWNAMVTAYAHVGCYNEVLEVFNEMLDDSTEKPDGFTLVNVLSACASLGSLSQGEW 297
Query: 83 IHAYIDKNGINIHGFLATAFVDMYSKC 3
+H YIDK+GI I GFLATA VDMYSKC
Sbjct: 298 VHVYIDKHGIEIEGFLATALVDMYSKC 324
Score = 94.0 bits (232), Expect = 2e-16
Identities = 69/242 (28%), Positives = 119/242 (49%), Gaps = 9/242 (3%)
Frame = -2
Query: 779 ASSVFSRIPNPSSYLWNTMIRSYANSCNPEESLLLFHQMLYDSFY-PDKFTYTFALKACS 603
A +F +P WN M+ +YA+ E L +F++ML DS PD FT L AC+
Sbjct: 228 AKEIFDSMPVKDVVSWNAMVTAYAHVGCYNEVLEVFNEMLDDSTEKPDGFTLVNVLSACA 287
Query: 602 FLLGIEEGRQIHGQILKTGNGFDCYIQNSLINLYARTGYFDNAYLLLDRMIQKDVISWNA 423
L + +G +H I K G + ++ +L+++Y++ G D A + ++DV +WN+
Sbjct: 288 SLGSLSQGEWVHVYIDKHGIEIEGFLATALVDMYSKCGKIDKALEVFRATSKRDVSTWNS 347
Query: 422 ILSAYTERGLMENARNLFEEMPDKNVESWNFMISGYVG----VELVEEARILFDEMPLKD 255
I+S + GL ++A +F EM + + G + V L+++AR LF+ M
Sbjct: 348 IISGLSVHGLGKDALEIFSEMVYEGFKPNGITFIGVLSACNHVGLLDQARRLFEMM--NS 405
Query: 254 VVSWNALITGY-AHSNQFGQVLKLFEDMQFANVKP---DNYTLVNVLSACAQFGALKQGE 87
V + Y + G++ K+ E + N P + L ++L +C +FG L+Q E
Sbjct: 406 VYGIEPTVEHYGCMVDLLGRMGKIEEAEELVNEIPADEASMLLESLLGSCKRFGKLEQAE 465
Query: 86 WI 81
I
Sbjct: 466 RI 467
>ref|XP_010436490.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18840-like
[Camelina sativa]
Length = 878
Score = 361 bits (927), Expect = 5e-97
Identities = 173/332 (52%), Positives = 240/332 (72%), Gaps = 1/332 (0%)
Frame = -2
Query: 995 FVNDTLSITMAFSISQPSIISFTELANSLSEINQAHAHMLKTGLFHDSYAASRLXXXXXX 816
++++ + + S Q I++FTE A SLSEI QAHA MLKTGLF D+Y+AS+L
Sbjct: 335 YIDEDECVVSSSSTLQVPILTFTERAKSLSEIKQAHAFMLKTGLFQDTYSASKLIAFAAT 394
Query: 815 XXXXSNPKTLTHASSVFSRIPNPSSYLWNTMIRSYANSCNPEESLLLFHQMLYDSFYPDK 636
PKT+++A S+ +RI + + + N++IR+YANS PE +L++F ML +PDK
Sbjct: 395 QTNP-EPKTVSYAHSILNRIESANGFTHNSVIRAYANSSTPEMALVVFRDMLLGPVFPDK 453
Query: 635 FTYTFALKACSFLLGIEEGRQIHGQILKTGNGFDCYIQNSLINLYARTGYFDNAYLLLDR 456
+++TF LKAC+ G E+G+QIHG +K+G D +++N+L+N+Y R+GYF+ A +LD
Sbjct: 454 YSFTFVLKACAAFCGFEQGKQIHGLFMKSGLMTDVFVENTLVNVYGRSGYFEIARKVLDE 513
Query: 455 MIQKDVISWNAILSAYTERGLMENARNLFEEMPDKNVESWNFMISGYVGVELVEEARILF 276
M +D +SWN++LSAY E+GL+E AR LF+EM ++NVESWNFMISGY LV+EA+ +F
Sbjct: 514 MPVRDAVSWNSLLSAYLEKGLVEEARALFDEMEERNVESWNFMISGYAAAGLVKEAKEIF 573
Query: 275 DEMPLKDVVSWNALITGYAHSNQFGQVLKLFEDM-QFANVKPDNYTLVNVLSACAQFGAL 99
D MP+KDVVSWNA++T YAH + VL++F +M + KPD +TLVNVLSACA G+L
Sbjct: 574 DSMPVKDVVSWNAMVTAYAHVGCYDDVLEVFNEMLDVSTEKPDGFTLVNVLSACASLGSL 633
Query: 98 KQGEWIHAYIDKNGINIHGFLATAFVDMYSKC 3
QGEW+H YIDK+GI I GFLATA VDMYSKC
Sbjct: 634 SQGEWVHVYIDKHGIEIEGFLATALVDMYSKC 665
Score = 89.4 bits (220), Expect = 4e-15
Identities = 65/242 (26%), Positives = 119/242 (49%), Gaps = 9/242 (3%)
Frame = -2
Query: 779 ASSVFSRIPNPSSYLWNTMIRSYANSCNPEESLLLFHQML-YDSFYPDKFTYTFALKACS 603
A +F +P WN M+ +YA+ ++ L +F++ML + PD FT L AC+
Sbjct: 569 AKEIFDSMPVKDVVSWNAMVTAYAHVGCYDDVLEVFNEMLDVSTEKPDGFTLVNVLSACA 628
Query: 602 FLLGIEEGRQIHGQILKTGNGFDCYIQNSLINLYARTGYFDNAYLLLDRMIQKDVISWNA 423
L + +G +H I K G + ++ +L+++Y++ G D A + ++DV +WN+
Sbjct: 629 SLGSLSQGEWVHVYIDKHGIEIEGFLATALVDMYSKCGKIDKALEVFRATSKRDVSTWNS 688
Query: 422 ILSAYTERGLMENARNLFEEMPDKNVESWNFMISGYVG----VELVEEARILFDEMPLKD 255
I+S + GL ++A +F EM + + G + V L+++AR LF+ M
Sbjct: 689 IISGLSVHGLGKDALEIFSEMVYEGFKPNGITFVGVLSACNHVGLLDQARNLFEMM--NS 746
Query: 254 VVSWNALITGY-AHSNQFGQVLKLFEDMQFANVKP---DNYTLVNVLSACAQFGALKQGE 87
V + Y + G++ ++ E + N P + L ++L +C +FG L+Q E
Sbjct: 747 VYGVEPTVEHYGCMVDLLGRMGRIEEAEELVNEIPADEASILLESLLGSCKRFGRLEQAE 806
Query: 86 WI 81
I
Sbjct: 807 RI 808
>ref|NP_193619.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75098703|sp|O49399.2|PP321_ARATH RecName:
Full=Pentatricopeptide repeat-containing protein
At4g18840 gi|5738365|emb|CAA16741.2| putative protein
[Arabidopsis thaliana] gi|7268678|emb|CAB78886.1|
putative protein [Arabidopsis thaliana]
gi|332658697|gb|AEE84097.1| pentatricopeptide
repeat-containing protein [Arabidopsis thaliana]
Length = 545
Score = 361 bits (927), Expect = 5e-97
Identities = 172/314 (54%), Positives = 235/314 (74%), Gaps = 1/314 (0%)
Frame = -2
Query: 941 IISFTELANSLSEINQAHAHMLKTGLFHDSYAASRLXXXXXXXXXXSNPKTLTHASSVFS 762
I+SFTE A SL+EI QAHA MLKTGLFHD+++AS+L PKT+++A S+ +
Sbjct: 42 ILSFTERAKSLTEIQQAHAFMLKTGLFHDTFSASKLVAFAATNP---EPKTVSYAHSILN 98
Query: 761 RIPNPSSYLWNTMIRSYANSCNPEESLLLFHQMLYDSFYPDKFTYTFALKACSFLLGIEE 582
RI +P+ + N++IR+YANS PE +L +F +ML +PDK+++TF LKAC+ G EE
Sbjct: 99 RIGSPNGFTHNSVIRAYANSSTPEVALTVFREMLLGPVFPDKYSFTFVLKACAAFCGFEE 158
Query: 581 GRQIHGQILKTGNGFDCYIQNSLINLYARTGYFDNAYLLLDRMIQKDVISWNAILSAYTE 402
GRQIHG +K+G D +++N+L+N+Y R+GYF+ A +LDRM +D +SWN++LSAY E
Sbjct: 159 GRQIHGLFIKSGLVTDVFVENTLVNVYGRSGYFEIARKVLDRMPVRDAVSWNSLLSAYLE 218
Query: 401 RGLMENARNLFEEMPDKNVESWNFMISGYVGVELVEEARILFDEMPLKDVVSWNALITGY 222
+GL++ AR LF+EM ++NVESWNFMISGY LV+EA+ +FD MP++DVVSWNA++T Y
Sbjct: 219 KGLVDEARALFDEMEERNVESWNFMISGYAAAGLVKEAKEVFDSMPVRDVVSWNAMVTAY 278
Query: 221 AHSNQFGQVLKLFEDM-QFANVKPDNYTLVNVLSACAQFGALKQGEWIHAYIDKNGINIH 45
AH + +VL++F M + KPD +TLV+VLSACA G+L QGEW+H YIDK+GI I
Sbjct: 279 AHVGCYNEVLEVFNKMLDDSTEKPDGFTLVSVLSACASLGSLSQGEWVHVYIDKHGIEIE 338
Query: 44 GFLATAFVDMYSKC 3
GFLATA VDMYSKC
Sbjct: 339 GFLATALVDMYSKC 352
Score = 93.6 bits (231), Expect = 2e-16
Identities = 71/242 (29%), Positives = 119/242 (49%), Gaps = 9/242 (3%)
Frame = -2
Query: 779 ASSVFSRIPNPSSYLWNTMIRSYANSCNPEESLLLFHQMLYDSFY-PDKFTYTFALKACS 603
A VF +P WN M+ +YA+ E L +F++ML DS PD FT L AC+
Sbjct: 256 AKEVFDSMPVRDVVSWNAMVTAYAHVGCYNEVLEVFNKMLDDSTEKPDGFTLVSVLSACA 315
Query: 602 FLLGIEEGRQIHGQILKTGNGFDCYIQNSLINLYARTGYFDNAYLLLDRMIQKDVISWNA 423
L + +G +H I K G + ++ +L+++Y++ G D A + ++DV +WN+
Sbjct: 316 SLGSLSQGEWVHVYIDKHGIEIEGFLATALVDMYSKCGKIDKALEVFRATSKRDVSTWNS 375
Query: 422 ILSAYTERGLMENARNLFEEMPDKNVESWNFMISGYVG----VELVEEARILFDEMPLKD 255
I+S + GL ++A +F EM + + G + V ++++AR LF+ M
Sbjct: 376 IISDLSVHGLGKDALEIFSEMVYEGFKPNGITFIGVLSACNHVGMLDQARKLFEMM--SS 433
Query: 254 VVSWNALITGY-AHSNQFGQVLKLFEDMQFANVKP---DNYTLVNVLSACAQFGALKQGE 87
V I Y + G++ K+ E + N P + L ++L AC +FG L+Q E
Sbjct: 434 VYRVEPTIEHYGCMVDLLGRMGKIEEAEELVNEIPADEASILLESLLGACKRFGQLEQAE 493
Query: 86 WI 81
I
Sbjct: 494 RI 495
>ref|XP_006414048.1| hypothetical protein EUTSA_v10024877mg [Eutrema salsugineum]
gi|557115218|gb|ESQ55501.1| hypothetical protein
EUTSA_v10024877mg [Eutrema salsugineum]
Length = 535
Score = 360 bits (925), Expect = 8e-97
Identities = 173/314 (55%), Positives = 233/314 (74%), Gaps = 1/314 (0%)
Frame = -2
Query: 941 IISFTELANSLSEINQAHAHMLKTGLFHDSYAASRLXXXXXXXXXXSNPKTLTHASSVFS 762
I+SFTE A SLSEI QAHA MLKTGLF D+++AS+L PKT+++A S+ +
Sbjct: 12 ILSFTERAKSLSEIQQAHAFMLKTGLFRDTFSASKLIAFAVVNP---EPKTVSYAHSILN 68
Query: 761 RIPNPSSYLWNTMIRSYANSCNPEESLLLFHQMLYDSFYPDKFTYTFALKACSFLLGIEE 582
RI +P+++ N++IR+YANS PE +L F +ML +PDK+++TF LKAC+ G EE
Sbjct: 69 RIESPNAFTHNSVIRAYANSSAPESALTAFREMLLGPVFPDKYSFTFVLKACAAFCGFEE 128
Query: 581 GRQIHGQILKTGNGFDCYIQNSLINLYARTGYFDNAYLLLDRMIQKDVISWNAILSAYTE 402
GRQIHG LK+ D +++N+L+N+Y R+GYF+ A +LD M ++DV+SWN++LSAY E
Sbjct: 129 GRQIHGLFLKSDLISDVFVENTLVNVYGRSGYFEIARKVLDTMPERDVVSWNSLLSAYVE 188
Query: 401 RGLMENARNLFEEMPDKNVESWNFMISGYVGVELVEEARILFDEMPLKDVVSWNALITGY 222
+GL+E AR +F+EM ++NVESWNFMISGY LV EA+ LFD MP+KDVVSWNA+++ Y
Sbjct: 189 KGLVEEARGVFDEMDERNVESWNFMISGYAAAGLVNEAKELFDSMPVKDVVSWNAMVSAY 248
Query: 221 AHSNQFGQVLKLFEDM-QFANVKPDNYTLVNVLSACAQFGALKQGEWIHAYIDKNGINIH 45
AH + +VL++F +M + KPD +TLVNVLSACA G+L QGEW+H Y DK+GI I
Sbjct: 249 AHVGCYSEVLEVFNEMLNSSTEKPDGFTLVNVLSACANLGSLSQGEWVHVYTDKHGIEID 308
Query: 44 GFLATAFVDMYSKC 3
GFLATA VDMYSKC
Sbjct: 309 GFLATALVDMYSKC 322
Score = 90.5 bits (223), Expect = 2e-15
Identities = 69/245 (28%), Positives = 118/245 (48%), Gaps = 9/245 (3%)
Frame = -2
Query: 788 LTHASSVFSRIPNPSSYLWNTMIRSYANSCNPEESLLLFHQMLYDSFY-PDKFTYTFALK 612
+ A +F +P WN M+ +YA+ E L +F++ML S PD FT L
Sbjct: 223 VNEAKELFDSMPVKDVVSWNAMVSAYAHVGCYSEVLEVFNEMLNSSTEKPDGFTLVNVLS 282
Query: 611 ACSFLLGIEEGRQIHGQILKTGNGFDCYIQNSLINLYARTGYFDNAYLLLDRMIQKDVIS 432
AC+ L + +G +H K G D ++ +L+++Y++ G D A + +KDV +
Sbjct: 283 ACANLGSLSQGEWVHVYTDKHGIEIDGFLATALVDMYSKCGKVDKALEVFRATSKKDVST 342
Query: 431 WNAILSAYTERGLMENARNLFEEMPDK----NVESWNFMISGYVGVELVEEARILFDEMP 264
WN+++S + GL +A +F EM + N ++ +S V ++++AR LF+ M
Sbjct: 343 WNSMISGLSVHGLGNDALEIFSEMVHEGFKPNSITFIATLSACNHVGMLDQARRLFETM- 401
Query: 263 LKDVVSWNALITGY-AHSNQFGQVLKLFEDMQFANVKP---DNYTLVNVLSACAQFGALK 96
V I Y + G++ K E + N P + L ++L AC +FG ++
Sbjct: 402 -NSVYGVEPTIEHYGCMVDLLGRMGKFEEAEELVNETPADEASVLLESLLGACKRFGRME 460
Query: 95 QGEWI 81
Q E I
Sbjct: 461 QAESI 465
>ref|XP_010439805.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g18840-like [Camelina sativa]
Length = 539
Score = 359 bits (921), Expect = 2e-96
Identities = 174/325 (53%), Positives = 236/325 (72%), Gaps = 1/325 (0%)
Frame = -2
Query: 974 ITMAFSISQPSIISFTELANSLSEINQAHAHMLKTGLFHDSYAASRLXXXXXXXXXXSNP 795
+ + S Q I++FTE A SLSEI QAHA MLKTGLF D+Y+AS+L P
Sbjct: 3 VVSSSSTLQVPILTFTERAKSLSEIKQAHAFMLKTGLFQDTYSASKLIAFAATQTNP-EP 61
Query: 794 KTLTHASSVFSRIPNPSSYLWNTMIRSYANSCNPEESLLLFHQMLYDSFYPDKFTYTFAL 615
T+++A S+ +RI +P+ + N++IR+YANS PE +L++F ML +PDK+++TFAL
Sbjct: 62 NTVSYAHSILNRIDSPNGFTHNSVIRAYANSSTPEMALVVFRDMLLGPVFPDKYSFTFAL 121
Query: 614 KACSFLLGIEEGRQIHGQILKTGNGFDCYIQNSLINLYARTGYFDNAYLLLDRMIQKDVI 435
KAC+ G E+GRQIHG +K+G D +++N+L+N+YAR+GYF A +LD M +D +
Sbjct: 122 KACAAFCGFEQGRQIHGLFMKSGLMTDVFVENTLVNVYARSGYFQIARKVLDEMPVRDAV 181
Query: 434 SWNAILSAYTERGLMENARNLFEEMPDKNVESWNFMISGYVGVELVEEARILFDEMPLKD 255
SWN++LSAY +GL+E AR LF+EM ++NVESWNFMISGY LV+EA+ +FD MP KD
Sbjct: 182 SWNSLLSAYLAKGLVEEARALFDEMEERNVESWNFMISGYAAAGLVKEAKEIFDSMPGKD 241
Query: 254 VVSWNALITGYAHSNQFGQVLKLFEDM-QFANVKPDNYTLVNVLSACAQFGALKQGEWIH 78
VVSWNA++T YAH + +VL++F +M + +PD +TLVNVLSACA G+L QGEW+H
Sbjct: 242 VVSWNAMVTAYAHVGCYDEVLEVFNEMLDSSTEEPDGFTLVNVLSACASLGSLSQGEWVH 301
Query: 77 AYIDKNGINIHGFLATAFVDMYSKC 3
YIDK+GI I GFLATA VDMYSKC
Sbjct: 302 VYIDKHGIEIEGFLATALVDMYSKC 326
Score = 93.6 bits (231), Expect = 2e-16
Identities = 69/242 (28%), Positives = 118/242 (48%), Gaps = 9/242 (3%)
Frame = -2
Query: 779 ASSVFSRIPNPSSYLWNTMIRSYANSCNPEESLLLFHQMLYDSFY-PDKFTYTFALKACS 603
A +F +P WN M+ +YA+ +E L +F++ML S PD FT L AC+
Sbjct: 230 AKEIFDSMPGKDVVSWNAMVTAYAHVGCYDEVLEVFNEMLDSSTEEPDGFTLVNVLSACA 289
Query: 602 FLLGIEEGRQIHGQILKTGNGFDCYIQNSLINLYARTGYFDNAYLLLDRMIQKDVISWNA 423
L + +G +H I K G + ++ +L+++Y++ G D A + ++DV +WN+
Sbjct: 290 SLGSLSQGEWVHVYIDKHGIEIEGFLATALVDMYSKCGKIDKALEVFRATSKRDVSTWNS 349
Query: 422 ILSAYTERGLMENARNLFEEMPDKNVESWNFMISGYVG----VELVEEARILFDEMPLKD 255
I+S + GL +A +F EM + + G + V L+++AR LF+ +
Sbjct: 350 IISGLSVHGLGNDALEIFSEMVYEGFKPNGITFVGVLSACNHVGLLDQARKLFE--MINS 407
Query: 254 VVSWNALITGY-AHSNQFGQVLKLFEDMQFANVKP---DNYTLVNVLSACAQFGALKQGE 87
V I Y + G++ K+ E + N P + L ++L AC +FG L+Q E
Sbjct: 408 VYGVEPTIEHYGCMVDLLGRMGKIEEAEELVNEIPAEEASVLLESLLGACKRFGRLEQAE 467
Query: 86 WI 81
I
Sbjct: 468 RI 469
Score = 74.3 bits (181), Expect = 1e-10
Identities = 72/317 (22%), Positives = 113/317 (35%), Gaps = 40/317 (12%)
Frame = -2
Query: 896 QAHAHMLKTGLFHDSYAASRLXXXXXXXXXXSNPKTLTHASSVFSRIPNPSSYLWNTMIR 717
Q H +K+GL D + + L A V +P + WN+++
Sbjct: 135 QIHGLFMKSGLMTDVFVENTLVNVYARSGY------FQIARKVLDEMPVRDAVSWNSLLS 188
Query: 716 SYANSCNPEESLLLFHQMLYDSFYPDKFTYTFALKACSFLLGIEEGRQIHGQILKTGNGF 537
+Y EE+ LF +M E R +
Sbjct: 189 AYLAKGLVEEARALFDEM--------------------------EERNVESW-------- 214
Query: 536 DCYIQNSLINLYARTGYFDNAYLLLDRMIQKDVISWNAILSAYTERGLMENARNLFEEMP 357
N +I+ YA G A + D M KDV+SWNA+++AY G + +F EM
Sbjct: 215 -----NFMISGYAAAGLVKEAKEIFDSMPGKDVVSWNAMVTAYAHVGCYDEVLEVFNEML 269
Query: 356 DKNVES-----------------------W--------NFMISGYVGVELVE-------- 294
D + E W I G++ LV+
Sbjct: 270 DSSTEEPDGFTLVNVLSACASLGSLSQGEWVHVYIDKHGIEIEGFLATALVDMYSKCGKI 329
Query: 293 -EARILFDEMPLKDVVSWNALITGYAHSNQFGQVLKLFEDMQFANVKPDNYTLVNVLSAC 117
+A +F +DV +WN++I+G + L++F +M + KP+ T V VLSAC
Sbjct: 330 DKALEVFRATSKRDVSTWNSIISGLSVHGLGNDALEIFSEMVYEGFKPNGITFVGVLSAC 389
Query: 116 AQFGALKQGEWIHAYID 66
G L Q + I+
Sbjct: 390 NHVGLLDQARKLFEMIN 406
>ref|XP_002867972.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata] gi|297313808|gb|EFH44231.1|
pentatricopeptide repeat-containing protein [Arabidopsis
lyrata subsp. lyrata]
Length = 535
Score = 358 bits (919), Expect = 4e-96
Identities = 173/314 (55%), Positives = 233/314 (74%), Gaps = 1/314 (0%)
Frame = -2
Query: 941 IISFTELANSLSEINQAHAHMLKTGLFHDSYAASRLXXXXXXXXXXSNPKTLTHASSVFS 762
I+SFTE A SL EI QAHA MLKTGLFHD+++AS+L PKT+++A S+ +
Sbjct: 12 ILSFTERAKSLLEIQQAHAFMLKTGLFHDTFSASKLVAFAATNP---EPKTVSYAHSILN 68
Query: 761 RIPNPSSYLWNTMIRSYANSCNPEESLLLFHQMLYDSFYPDKFTYTFALKACSFLLGIEE 582
RI +P+ + N++IR+YANS PE +L +F +ML +PDK+++TF LKAC+ G EE
Sbjct: 69 RIESPNGFTHNSVIRAYANSSTPEIALTVFREMLLGPVFPDKYSFTFVLKACAAFCGFEE 128
Query: 581 GRQIHGQILKTGNGFDCYIQNSLINLYARTGYFDNAYLLLDRMIQKDVISWNAILSAYTE 402
GRQIHG +K+ D +++N+LIN+Y R+GYF+ A +LDRM +D +SWN++LSAY +
Sbjct: 129 GRQIHGLFMKSDLVTDVFVENTLINVYGRSGYFEIARKVLDRMPVRDAVSWNSLLSAYLD 188
Query: 401 RGLMENARNLFEEMPDKNVESWNFMISGYVGVELVEEARILFDEMPLKDVVSWNALITGY 222
+GL+E AR LF+EM ++NVESWNFMISGY LV+EAR +FD MP+KDVVSWNA++T Y
Sbjct: 189 KGLVEEARALFDEMEERNVESWNFMISGYAAAGLVKEAREVFDSMPVKDVVSWNAMVTAY 248
Query: 221 AHSNQFGQVLKLFEDM-QFANVKPDNYTLVNVLSACAQFGALKQGEWIHAYIDKNGINIH 45
AH + +VL++F M + +PD +TLVNVLSACA G+L QGEW+H YIDK+GI I
Sbjct: 249 AHVGCYNEVLEVFNMMLDDSAERPDGFTLVNVLSACASLGSLSQGEWVHVYIDKHGIEIE 308
Query: 44 GFLATAFVDMYSKC 3
GF+ATA VDMYSKC
Sbjct: 309 GFVATALVDMYSKC 322
Score = 93.2 bits (230), Expect = 3e-16
Identities = 71/242 (29%), Positives = 117/242 (48%), Gaps = 9/242 (3%)
Frame = -2
Query: 779 ASSVFSRIPNPSSYLWNTMIRSYANSCNPEESLLLFHQMLYDSFY-PDKFTYTFALKACS 603
A VF +P WN M+ +YA+ E L +F+ ML DS PD FT L AC+
Sbjct: 226 AREVFDSMPVKDVVSWNAMVTAYAHVGCYNEVLEVFNMMLDDSAERPDGFTLVNVLSACA 285
Query: 602 FLLGIEEGRQIHGQILKTGNGFDCYIQNSLINLYARTGYFDNAYLLLDRMIQKDVISWNA 423
L + +G +H I K G + ++ +L+++Y++ G D A + ++DV +WN+
Sbjct: 286 SLGSLSQGEWVHVYIDKHGIEIEGFVATALVDMYSKCGKIDKALEVFRDTSKRDVSTWNS 345
Query: 422 ILSAYTERGLMENARNLFEEMPDKNVESWNFMISGYVG----VELVEEARILFDEMPLKD 255
I++ + GL ++A +F EM + + G + V L+++AR LF+ M
Sbjct: 346 IITGLSVHGLGKDALEIFSEMVYEGFKPNGITFIGVLSACNHVGLLDQARKLFEMM--NS 403
Query: 254 VVSWNALITGY-AHSNQFGQVLKLFEDMQFANVKP---DNYTLVNVLSACAQFGALKQGE 87
V I Y + G++ K E + N P + L ++L AC +FG L+Q E
Sbjct: 404 VYGIEPTIEHYGCMVDLLGRMGKFEEAEELVNEVPADEASILLESLLGACKRFGKLEQAE 463
Query: 86 WI 81
I
Sbjct: 464 RI 465
>ref|XP_010943932.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18840
[Elaeis guineensis]
Length = 528
Score = 355 bits (912), Expect = 3e-95
Identities = 171/321 (53%), Positives = 238/321 (74%)
Frame = -2
Query: 965 AFSISQPSIISFTELANSLSEINQAHAHMLKTGLFHDSYAASRLXXXXXXXXXXSNPKTL 786
A + PSI+ FT++A +LSE++Q+HA+M+KTGL H AA+RL P L
Sbjct: 3 ATPLPPPSILYFTDMATNLSEVHQSHANMIKTGLIHSPAAAARLLSSAIAAD---EPPAL 59
Query: 785 THASSVFSRIPNPSSYLWNTMIRSYANSCNPEESLLLFHQMLYDSFYPDKFTYTFALKAC 606
+A S+F+R+P P+S+ WN+MIR++A + +P +L LF++ML+ PD FT+ F LKAC
Sbjct: 60 AYADSLFARLPAPTSFAWNSMIRAHARAPDPGPALQLFYRMLHSPTRPDNFTFPFILKAC 119
Query: 605 SFLLGIEEGRQIHGQILKTGNGFDCYIQNSLINLYARTGYFDNAYLLLDRMIQKDVISWN 426
+ L + E QIH +I+KTG G D ++ N+L++ YA G + A+ L RM QKD+ISWN
Sbjct: 120 AALPALSETLQIHARIIKTGFGSDIFVLNTLLHTYAINGLTEEAFKLFGRMPQKDLISWN 179
Query: 425 AILSAYTERGLMENARNLFEEMPDKNVESWNFMISGYVGVELVEEARILFDEMPLKDVVS 246
A+++A GL++ ARNLF+EMP++NVE+WNFMISGY+ + LV+++R LF+ MP++D+VS
Sbjct: 180 ALINALVAHGLIDPARNLFDEMPERNVETWNFMISGYLDLGLVDQSRELFNLMPVRDIVS 239
Query: 245 WNALITGYAHSNQFGQVLKLFEDMQFANVKPDNYTLVNVLSACAQFGALKQGEWIHAYID 66
WNA+ITG AH+ +F +V+ LF++MQ+ NV PD TLVNVLSACA+ GAL QGEWI AY+D
Sbjct: 240 WNAMITGCAHAGRFDEVISLFQEMQYDNVWPDECTLVNVLSACARVGALGQGEWIRAYVD 299
Query: 65 KNGINIHGFLATAFVDMYSKC 3
KNGI I GFLATAFVDMYSKC
Sbjct: 300 KNGIEIKGFLATAFVDMYSKC 320
Score = 85.9 bits (211), Expect = 5e-14
Identities = 59/237 (24%), Positives = 114/237 (48%), Gaps = 9/237 (3%)
Frame = -2
Query: 770 VFSRIPNPSSYLWNTMIRSYANSCNPEESLLLFHQMLYDSFYPDKFTYTFALKACSFLLG 591
+F+ +P WN MI A++ +E + LF +M YD+ +PD+ T L AC+ +
Sbjct: 228 LFNLMPVRDIVSWNAMITGCAHAGRFDEVISLFQEMQYDNVWPDECTLVNVLSACARVGA 287
Query: 590 IEEGRQIHGQILKTGNGFDCYIQNSLINLYARTGYFDNAYLLLDRMIQKDVISWNAILSA 411
+ +G I + K G ++ + +++Y++ G + A + +KDV +WNA++
Sbjct: 288 LGQGEWIRAYVDKNGIEIKGFLATAFVDMYSKCGSIEKALQVFSNASKKDVSTWNAMIDG 347
Query: 410 YTERGLMENARNLFEEMPDK----NVESWNFMISGYVGVELVEEARILFDEMPL-----K 258
+ G E+A LFE+MP N ++ ++S L+ E +FD+M
Sbjct: 348 LSSHGFGEHALRLFEDMPRNGLVPNGVTFVNVLSACSHGGLLNEGCRIFDDMACVYGIEP 407
Query: 257 DVVSWNALITGYAHSNQFGQVLKLFEDMQFANVKPDNYTLVNVLSACAQFGALKQGE 87
D+ + ++ + G +++ E ++ A VK ++LSAC + G ++ E
Sbjct: 408 DIEHYGCMVDLLGRA---GLLVEAKELLKRAPVKDAPVLWRSLLSACREHGDVELAE 461
>ref|XP_006358091.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g18840-like [Solanum tuberosum]
Length = 536
Score = 353 bits (906), Expect = 1e-94
Identities = 173/316 (54%), Positives = 238/316 (75%), Gaps = 2/316 (0%)
Frame = -2
Query: 944 SIISFTELANSLSEINQAHAHMLKTGLFHDSYAASRLXXXXXXXXXXSNPKTLTHASSVF 765
++ SF E+ANS+SE++QAHA MLKTGLF D +AASRL +P+TL++A SVF
Sbjct: 10 TLSSFLEMANSISELHQAHAVMLKTGLFRDPFAASRLLTKATVLPIS-SPETLSYALSVF 68
Query: 764 SRIPNPSSYLWNTMIRSYANSCNPEESLLLFHQML--YDSFYPDKFTYTFALKACSFLLG 591
+ I P+SY++NT+IR+Y+ S P+ +L++F +ML + +PD++T+TF +KAC+ +
Sbjct: 69 THIEEPNSYIYNTIIRAYSTSPFPQLALIIFLKMLNSVNKVFPDRYTFTFIVKACATMEN 128
Query: 590 IEEGRQIHGQILKTGNGFDCYIQNSLINLYARTGYFDNAYLLLDRMIQKDVISWNAILSA 411
++G Q+HG + K G D YI N+L+++YA+ G F + ++D +I+ DVI+WNA+LS
Sbjct: 129 AKQGEQVHGLVTKIGLEEDVYIYNTLVHMYAKCGCFGISRGMIDGLIEDDVIAWNALLSV 188
Query: 410 YTERGLMENARNLFEEMPDKNVESWNFMISGYVGVELVEEARILFDEMPLKDVVSWNALI 231
Y ERGL E AR LF+EMP KNVESWNFM+SGYV V LV+EAR +FDEM +KDVVSWN +I
Sbjct: 189 YAERGLFELARELFDEMPVKNVESWNFMVSGYVNVGLVDEARKVFDEMLVKDVVSWNVMI 248
Query: 230 TGYAHSNQFGQVLKLFEDMQFANVKPDNYTLVNVLSACAQFGALKQGEWIHAYIDKNGIN 51
TGY +++F +VL LFEDM A VKPD+ TLVNVLSACA G+L QG+W+HA+I++NGI
Sbjct: 249 TGYTKADKFNEVLTLFEDMLRAKVKPDDCTLVNVLSACAGVGSLSQGKWVHAFIERNGIE 308
Query: 50 IHGFLATAFVDMYSKC 3
+H FLATA VDMY KC
Sbjct: 309 VHNFLATALVDMYCKC 324
Score = 73.9 bits (180), Expect = 2e-10
Identities = 37/147 (25%), Positives = 70/147 (47%)
Frame = -2
Query: 800 NPKTLTHASSVFSRIPNPSSYLWNTMIRSYANSCNPEESLLLFHQMLYDSFYPDKFTYTF 621
N + A VF + WN MI Y + E L LF ML PD T
Sbjct: 222 NVGLVDEARKVFDEMLVKDVVSWNVMITGYTKADKFNEVLTLFEDMLRAKVKPDDCTLVN 281
Query: 620 ALKACSFLLGIEEGRQIHGQILKTGNGFDCYIQNSLINLYARTGYFDNAYLLLDRMIQKD 441
L AC+ + + +G+ +H I + G ++ +L+++Y + G + + + ++KD
Sbjct: 282 VLSACAGVGSLSQGKWVHAFIERNGIEVHNFLATALVDMYCKCGCIEKGLEVFNGTLRKD 341
Query: 440 VISWNAILSAYTERGLMENARNLFEEM 360
+ +WNA+++ ++ G +++A F E+
Sbjct: 342 ISTWNAMIAGFSNHGYLDDALKTFNEL 368
>ref|XP_009764895.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18840
[Nicotiana sylvestris] gi|698537670|ref|XP_009764896.1|
PREDICTED: pentatricopeptide repeat-containing protein
At4g18840 [Nicotiana sylvestris]
Length = 550
Score = 352 bits (904), Expect = 2e-94
Identities = 176/342 (51%), Positives = 247/342 (72%), Gaps = 2/342 (0%)
Frame = -2
Query: 1022 IVITITEFFFVNDTLSITMAFSISQPSIISFTELANSLSEINQAHAHMLKTGLFHDSYAA 843
IV+ +T+ + +T+S A ++S I SF E+ANS+SE++Q+HA +LKTGLF + +AA
Sbjct: 2 IVVPVTK---IGNTMS--PAATLSPEPIFSFIEMANSISELHQSHAFLLKTGLFRNPFAA 56
Query: 842 SRLXXXXXXXXXXSNPKTLTHASSVFSRIPNPSSYLWNTMIRSYANSCNPEESLLLFHQM 663
SRL S+ TL++ S+F+ I P+SY +NT+IR+Y+ S P+ SL++F ++
Sbjct: 57 SRLLTKATTLPSSSSADTLSYPLSIFTHIEEPNSYTYNTIIRAYSTSSFPQLSLIIFLKL 116
Query: 662 L--YDSFYPDKFTYTFALKACSFLLGIEEGRQIHGQILKTGNGFDCYIQNSLINLYARTG 489
L +PDK+T+TF +KAC+ + ++G Q+HG + K G D Y+ N+LI++YA+ G
Sbjct: 117 LNAVHKVFPDKYTFTFIVKACATIGNAKQGEQVHGLVTKIGLEEDVYVYNTLIHMYAKCG 176
Query: 488 YFDNAYLLLDRMIQKDVISWNAILSAYTERGLMENARNLFEEMPDKNVESWNFMISGYVG 309
F + ++D +++ DVI+WN +LS + ERGL E AR LF+EMP KNVESWNFM+SGYV
Sbjct: 177 CFGVSRGMIDGLVEDDVIAWNGLLSVFAERGLFELARELFDEMPVKNVESWNFMVSGYVN 236
Query: 308 VELVEEARILFDEMPLKDVVSWNALITGYAHSNQFGQVLKLFEDMQFANVKPDNYTLVNV 129
V LV+EAR +FDEM +KDVVSWN +ITGY +++F +VL LFEDM A VKPDN TLVNV
Sbjct: 237 VGLVDEARKVFDEMLVKDVVSWNVMITGYTKADRFAEVLALFEDMLRAKVKPDNCTLVNV 296
Query: 128 LSACAQFGALKQGEWIHAYIDKNGINIHGFLATAFVDMYSKC 3
LSACA G+L QG+W+HAYI++NGI +H FLATA VDMY KC
Sbjct: 297 LSACAGVGSLSQGKWVHAYIERNGIEVHDFLATALVDMYCKC 338
Score = 76.3 bits (186), Expect = 4e-11
Identities = 45/182 (24%), Positives = 86/182 (47%), Gaps = 4/182 (2%)
Frame = -2
Query: 800 NPKTLTHASSVFSRIPNPSSYLWNTMIRSYANSCNPEESLLLFHQMLYDSFYPDKFTYTF 621
N + A VF + WN MI Y + E L LF ML PD T
Sbjct: 236 NVGLVDEARKVFDEMLVKDVVSWNVMITGYTKADRFAEVLALFEDMLRAKVKPDNCTLVN 295
Query: 620 ALKACSFLLGIEEGRQIHGQILKTGNGFDCYIQNSLINLYARTGYFDNAYLLLDRMIQKD 441
L AC+ + + +G+ +H I + G ++ +L+++Y + G + A + + ++KD
Sbjct: 296 VLSACAGVGSLSQGKWVHAYIERNGIEVHDFLATALVDMYCKCGCIEKALEVFNGTLRKD 355
Query: 440 VISWNAILSAYTERGLMENARNLFEEMPDKNVE----SWNFMISGYVGVELVEEARILFD 273
+ +WNA+++ + G +++A F+E+ ++ ++ ++S L+ E R +FD
Sbjct: 356 ISTWNAMIAGLSNHGYLDDALKTFDELIADGIKPNKVTFVSVLSTCSQGGLLSEGRRMFD 415
Query: 272 EM 267
M
Sbjct: 416 LM 417
>ref|XP_013719427.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18840
[Brassica napus]
Length = 536
Score = 351 bits (901), Expect = 5e-94
Identities = 168/314 (53%), Positives = 233/314 (74%), Gaps = 1/314 (0%)
Frame = -2
Query: 941 IISFTELANSLSEINQAHAHMLKTGLFHDSYAASRLXXXXXXXXXXSNPKTLTHASSVFS 762
I++FTE A SLSEI QAHA MLKTGL D+++AS+L PKT+++A S+ +
Sbjct: 13 ILTFTERAKSLSEIQQAHAFMLKTGLSRDTFSASKLIAYAVANP---EPKTVSYAHSILN 69
Query: 761 RIPNPSSYLWNTMIRSYANSCNPEESLLLFHQMLYDSFYPDKFTYTFALKACSFLLGIEE 582
RI P+ + N++IR+YANS PE +L F +ML PDK+++TFALKAC+ G+EE
Sbjct: 70 RIDTPNVFTHNSLIRAYANSSTPEIALTAFREMLLGPVAPDKYSFTFALKACAAFRGVEE 129
Query: 581 GRQIHGQILKTGNGFDCYIQNSLINLYARTGYFDNAYLLLDRMIQKDVISWNAILSAYTE 402
GRQIHG LK+G D +++N+L+N+YAR+G+F+ A +LD M ++DV+SWN++LSA+ E
Sbjct: 130 GRQIHGHFLKSGLDSDVFVENTLVNVYARSGWFEVARKVLDEMPERDVVSWNSLLSAFVE 189
Query: 401 RGLMENARNLFEEMPDKNVESWNFMISGYVGVELVEEARILFDEMPLKDVVSWNALITGY 222
+GL+E AR LF+EM ++NVESWNFM+S Y LVEEAR FDEMP+KD+VSWNA+++GY
Sbjct: 190 KGLVEEARELFDEMEERNVESWNFMVSCYAAAGLVEEARECFDEMPVKDLVSWNAMVSGY 249
Query: 221 AHSNQFGQVLKLFEDM-QFANVKPDNYTLVNVLSACAQFGALKQGEWIHAYIDKNGINIH 45
A + +G+ L++F +M + +PD +T V+VLSACA G+L QGEW+ YIDK+G+ I
Sbjct: 250 ARAGCYGEALEVFNEMLKSCAEEPDGFTFVSVLSACANLGSLSQGEWVRVYIDKHGVEID 309
Query: 44 GFLATAFVDMYSKC 3
GFLATA VDMYSKC
Sbjct: 310 GFLATALVDMYSKC 323
Score = 87.0 bits (214), Expect = 2e-14
Identities = 68/240 (28%), Positives = 117/240 (48%), Gaps = 9/240 (3%)
Frame = -2
Query: 779 ASSVFSRIPNPSSYLWNTMIRSYANSCNPEESLLLFHQMLYD-SFYPDKFTYTFALKACS 603
A F +P WN M+ YA + E+L +F++ML + PD FT+ L AC+
Sbjct: 227 ARECFDEMPVKDLVSWNAMVSGYARAGCYGEALEVFNEMLKSCAEEPDGFTFVSVLSACA 286
Query: 602 FLLGIEEGRQIHGQILKTGNGFDCYIQNSLINLYARTGYFDNAYLLLDRMIQKDVISWNA 423
L + +G + I K G D ++ +L+++Y++ G D A + +KDV +WN+
Sbjct: 287 NLGSLSQGEWVRVYIDKHGVEIDGFLATALVDMYSKCGRIDKAVEVFRSASKKDVSTWNS 346
Query: 422 ILSAYTERGLMENARNLFEEMP----DKNVESWNFMISGYVGVELVEEARILFDEMPLKD 255
+++ + GL +A +F EM N ++ ++S V L+++AR LF+ M
Sbjct: 347 MITGLSVHGLGNDALGIFSEMVYEGFKPNSVTFIAVLSACNHVGLLDQARKLFETM--GS 404
Query: 254 VVSWNALITGY-AHSNQFGQVLKLFEDMQFAN-VKPD--NYTLVNVLSACAQFGALKQGE 87
V I Y + G++ + E + N V PD + L ++L AC +FG +Q E
Sbjct: 405 VYGVEPSIEHYGCMVDLLGRLGRFEEAEELVNKVPPDEASVLLESLLGACKRFGRTEQAE 464
>emb|CDO96870.1| unnamed protein product [Coffea canephora]
Length = 516
Score = 351 bits (901), Expect = 5e-94
Identities = 170/309 (55%), Positives = 232/309 (75%), Gaps = 2/309 (0%)
Frame = -2
Query: 923 LANSLSEINQAHAHMLKTGLFHDSYAASRLXXXXXXXXXXSNPKTLTHASSVFSRIPNPS 744
+A S+SE++QAHA+MLKTGLF +AASRL +L++A ++F++ P P+
Sbjct: 1 MATSISELHQAHAYMLKTGLFQQPFAASRLMTAAASSSID----SLSYAHTIFTQTPQPN 56
Query: 743 SYLWNTMIRSYANSCNPEESLLLFHQMLYDS--FYPDKFTYTFALKACSFLLGIEEGRQI 570
+Y++NT+IR YA S P +L LF ++L D PDK+TYTF LKAC+ L ++ G+QI
Sbjct: 57 TYMYNTLIRGYATSPTPNVALFLFLKLLCDDQDLLPDKYTYTFVLKACASLCRVKHGKQI 116
Query: 569 HGQILKTGNGFDCYIQNSLINLYARTGYFDNAYLLLDRMIQKDVISWNAILSAYTERGLM 390
HG ++K G +D YI N+L+++YA+ G F+ A +LDRM +DV+SWNA+LS Y E GL+
Sbjct: 117 HGCVIKNGLSWDVYICNTLLHMYAKCGCFEAARHMLDRMPNRDVVSWNAVLSVYVEMGLV 176
Query: 389 ENARNLFEEMPDKNVESWNFMISGYVGVELVEEARILFDEMPLKDVVSWNALITGYAHSN 210
+ A + F EMP KN+ESWNFM+SGY L++EAR +FDEM +KDVVSWNALITGYA+S
Sbjct: 177 DLAFDFFSEMPVKNLESWNFMLSGYANSGLLDEARRVFDEMSVKDVVSWNALITGYANSG 236
Query: 209 QFGQVLKLFEDMQFANVKPDNYTLVNVLSACAQFGALKQGEWIHAYIDKNGINIHGFLAT 30
++ +VL+LF+DMQ A VKPDN+TLV +LSACA GAL+QG+W+HAY+D+NGI +GFLAT
Sbjct: 237 RYNEVLELFDDMQRARVKPDNHTLVTLLSACAGIGALEQGKWVHAYMDRNGIEANGFLAT 296
Query: 29 AFVDMYSKC 3
A VDMYSKC
Sbjct: 297 ALVDMYSKC 305
Score = 85.1 bits (209), Expect = 8e-14
Identities = 51/182 (28%), Positives = 88/182 (48%), Gaps = 4/182 (2%)
Frame = -2
Query: 800 NPKTLTHASSVFSRIPNPSSYLWNTMIRSYANSCNPEESLLLFHQMLYDSFYPDKFTYTF 621
N L A VF + WN +I YANS E L LF M PD T
Sbjct: 203 NSGLLDEARRVFDEMSVKDVVSWNALITGYANSGRYNEVLELFDDMQRARVKPDNHTLVT 262
Query: 620 ALKACSFLLGIEEGRQIHGQILKTGNGFDCYIQNSLINLYARTGYFDNAYLLLDRMIQKD 441
L AC+ + +E+G+ +H + + G + ++ +L+++Y++ G + A + D +KD
Sbjct: 263 LLSACAGIGALEQGKWVHAYMDRNGIEANGFLATALVDMYSKCGCIEKAVEVFDSASRKD 322
Query: 440 VISWNAILSAYTERGLMENARNLFEEMPDK----NVESWNFMISGYVGVELVEEARILFD 273
V +WNA+++ ++ G E A +F EM + N ++ ++S L+ E+ +FD
Sbjct: 323 VSTWNAMITGFSVHGFGEQALKVFSEMVENGFKPNDVTFVSLLSACSRAGLLFESHEIFD 382
Query: 272 EM 267
M
Sbjct: 383 NM 384
>ref|XP_009627120.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18840
[Nicotiana tomentosiformis]
Length = 550
Score = 350 bits (899), Expect = 8e-94
Identities = 173/327 (52%), Positives = 239/327 (73%), Gaps = 2/327 (0%)
Frame = -2
Query: 977 SITMAFSISQPSIISFTELANSLSEINQAHAHMLKTGLFHDSYAASRLXXXXXXXXXXSN 798
+++MA ++S I SF E ANS+SE++Q+HA +LKTGLF + +AASRL S+
Sbjct: 12 TMSMAATLSPEPIFSFIETANSISELHQSHAFLLKTGLFRNPFAASRLLTKATTLPTSSS 71
Query: 797 PKTLTHASSVFSRIPNPSSYLWNTMIRSYANSCNPEESLLLFHQML--YDSFYPDKFTYT 624
TL++A S+F+ I P+SY +NT+IR+Y+ S P+ SL++F ++L +PDK+T+T
Sbjct: 72 ADTLSYALSIFTHIEEPNSYTYNTIIRAYSTSSFPQLSLIIFLKLLNAVHKIFPDKYTFT 131
Query: 623 FALKACSFLLGIEEGRQIHGQILKTGNGFDCYIQNSLINLYARTGYFDNAYLLLDRMIQK 444
F +KAC+ + ++G+Q+HG + K G D Y+ N+LI++YA+ G F + ++D +++
Sbjct: 132 FIVKACATIGNAKQGQQVHGLVTKIGLEEDEYVHNTLIHMYAKCGCFGVSRGMIDGLVED 191
Query: 443 DVISWNAILSAYTERGLMENARNLFEEMPDKNVESWNFMISGYVGVELVEEARILFDEMP 264
DVI+WN +LS + ERGL E AR LF+EMP KNVESWNFMISGYV V LV+EAR +FDEM
Sbjct: 192 DVIAWNGLLSVFAERGLFELARELFDEMPVKNVESWNFMISGYVNVGLVDEARKVFDEMS 251
Query: 263 LKDVVSWNALITGYAHSNQFGQVLKLFEDMQFANVKPDNYTLVNVLSACAQFGALKQGEW 84
KDVVSWN +ITGY +++F +VL LFEDM A VKPDN TLVNVLSACA G+L QG+W
Sbjct: 252 DKDVVSWNVMITGYTKADKFAEVLALFEDMLRAKVKPDNCTLVNVLSACAGVGSLSQGKW 311
Query: 83 IHAYIDKNGINIHGFLATAFVDMYSKC 3
+HAYI++ GI +H FLATA VDMY KC
Sbjct: 312 VHAYIERYGIQVHDFLATALVDMYCKC 338
Score = 77.4 bits (189), Expect = 2e-11
Identities = 45/182 (24%), Positives = 86/182 (47%), Gaps = 4/182 (2%)
Frame = -2
Query: 800 NPKTLTHASSVFSRIPNPSSYLWNTMIRSYANSCNPEESLLLFHQMLYDSFYPDKFTYTF 621
N + A VF + + WN MI Y + E L LF ML PD T
Sbjct: 236 NVGLVDEARKVFDEMSDKDVVSWNVMITGYTKADKFAEVLALFEDMLRAKVKPDNCTLVN 295
Query: 620 ALKACSFLLGIEEGRQIHGQILKTGNGFDCYIQNSLINLYARTGYFDNAYLLLDRMIQKD 441
L AC+ + + +G+ +H I + G ++ +L+++Y + G + A + + ++KD
Sbjct: 296 VLSACAGVGSLSQGKWVHAYIERYGIQVHDFLATALVDMYCKCGCIEKALEVFNGTLRKD 355
Query: 440 VISWNAILSAYTERGLMENARNLFEEMPDKNVE----SWNFMISGYVGVELVEEARILFD 273
+ +WNA+++ + G +++A F E+ ++ ++ ++S L+ E R +FD
Sbjct: 356 ISTWNAMIAGLSNHGFLDDALETFNELIADGIKPNEVTFVSVLSTCSQGGLLSEGRRMFD 415
Query: 272 EM 267
M
Sbjct: 416 LM 417
>ref|XP_009132265.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18840
[Brassica rapa]
Length = 535
Score = 348 bits (892), Expect = 5e-93
Identities = 168/315 (53%), Positives = 236/315 (74%), Gaps = 2/315 (0%)
Frame = -2
Query: 941 IISFTELANSLSEINQAHAHMLKTGLFHDSYAASRLXXXXXXXXXXSNPKTLTHASSVFS 762
I++FTE A SLSEI QAHA MLKTGL D+++AS+L PKT+++A S+ +
Sbjct: 11 ILTFTEKAKSLSEIQQAHAFMLKTGLSRDTFSASKLISFAVANP---EPKTVSYAHSILN 67
Query: 761 RIPNPSSYLWNTMIRSYANSCNPEESLLLFHQMLYDS-FYPDKFTYTFALKACSFLLGIE 585
RI P+++ N++IR+YANS PE +L F +ML PDK+++TFALKAC+ G+E
Sbjct: 68 RIDTPNAFTHNSLIRAYANSPTPEMALTAFREMLLGGPVAPDKYSFTFALKACAAFRGVE 127
Query: 584 EGRQIHGQILKTGNGFDCYIQNSLINLYARTGYFDNAYLLLDRMIQKDVISWNAILSAYT 405
EGRQ+HG LK+G D +++N+L+N+YAR+G+F+ A +LD M ++DV+SWN++LSA+
Sbjct: 128 EGRQLHGLFLKSGLDSDVFVENTLVNVYARSGWFEVARKVLDEMPERDVVSWNSLLSAFV 187
Query: 404 ERGLMENARNLFEEMPDKNVESWNFMISGYVGVELVEEARILFDEMPLKDVVSWNALITG 225
E+GL+E AR LF+EM ++NVESWNFM+S Y LVEEAR +FDEMP+KD+VSWNA+++G
Sbjct: 188 EKGLVEEARGLFDEMEERNVESWNFMVSCYAAAGLVEEARGVFDEMPVKDLVSWNAMVSG 247
Query: 224 YAHSNQFGQVLKLFEDM-QFANVKPDNYTLVNVLSACAQFGALKQGEWIHAYIDKNGINI 48
YA + +G+ L++F +M + +PD +TLV+VLSACA G+L QGEW+ YIDK+G+ I
Sbjct: 248 YASAGCYGEALEVFNEMLKSCAEEPDGFTLVSVLSACANLGSLSQGEWVRVYIDKHGVEI 307
Query: 47 HGFLATAFVDMYSKC 3
GFLATA VDMYSKC
Sbjct: 308 DGFLATALVDMYSKC 322
Score = 87.4 bits (215), Expect = 2e-14
Identities = 69/240 (28%), Positives = 118/240 (49%), Gaps = 9/240 (3%)
Frame = -2
Query: 779 ASSVFSRIPNPSSYLWNTMIRSYANSCNPEESLLLFHQMLYD-SFYPDKFTYTFALKACS 603
A VF +P WN M+ YA++ E+L +F++ML + PD FT L AC+
Sbjct: 226 ARGVFDEMPVKDLVSWNAMVSGYASAGCYGEALEVFNEMLKSCAEEPDGFTLVSVLSACA 285
Query: 602 FLLGIEEGRQIHGQILKTGNGFDCYIQNSLINLYARTGYFDNAYLLLDRMIQKDVISWNA 423
L + +G + I K G D ++ +L+++Y++ G D A + +KDV +WN+
Sbjct: 286 NLGSLSQGEWVRVYIDKHGVEIDGFLATALVDMYSKCGRIDKAIEVFRGASKKDVSTWNS 345
Query: 422 ILSAYTERGLMENARNLFEEMP----DKNVESWNFMISGYVGVELVEEARILFDEMPLKD 255
+++ + GL +A +F EM N ++ ++S V L+++AR LF+ M
Sbjct: 346 MITGLSVHGLGNDALEIFSEMVYEGFKPNGITFIAVLSACNHVGLLDQARKLFETM--SS 403
Query: 254 VVSWNALITGY-AHSNQFGQVLKLFEDMQFAN-VKPD--NYTLVNVLSACAQFGALKQGE 87
V I Y + G++ + E + N V PD + L ++L AC +FG +Q E
Sbjct: 404 VYGVEPSIEHYGCMVDLLGRLGRFEEAEELVNKVPPDEASVLLESLLGACKRFGRTEQAE 463
>ref|XP_013607492.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18840
[Brassica oleracea var. oleracea]
Length = 536
Score = 346 bits (888), Expect = 2e-92
Identities = 165/314 (52%), Positives = 233/314 (74%), Gaps = 1/314 (0%)
Frame = -2
Query: 941 IISFTELANSLSEINQAHAHMLKTGLFHDSYAASRLXXXXXXXXXXSNPKTLTHASSVFS 762
I++FTE A SLSEI QAHA MLKTGL D+++AS+L PKT+++A S+ +
Sbjct: 13 ILTFTERAKSLSEIQQAHAFMLKTGLSRDTFSASKLISFAVANP---EPKTVSYAHSILN 69
Query: 761 RIPNPSSYLWNTMIRSYANSCNPEESLLLFHQMLYDSFYPDKFTYTFALKACSFLLGIEE 582
R+ +++ N++IR+YANS PE +L F +ML PDK+++TFALK+C+ G+EE
Sbjct: 70 RVDTLNAFTHNSLIRAYANSSTPEIALTAFREMLLGPVAPDKYSFTFALKSCAAFRGVEE 129
Query: 581 GRQIHGQILKTGNGFDCYIQNSLINLYARTGYFDNAYLLLDRMIQKDVISWNAILSAYTE 402
GRQIHG LK+G D +++N+L+N+YAR+G+F+ A +LD M ++DV+SWN++LSA+ E
Sbjct: 130 GRQIHGLFLKSGLDSDVFVENTLVNVYARSGWFEVARKVLDEMPERDVVSWNSLLSAFVE 189
Query: 401 RGLMENARNLFEEMPDKNVESWNFMISGYVGVELVEEARILFDEMPLKDVVSWNALITGY 222
+GL+E AR LF+EM ++NVESWNFM+S Y LVEEAR FDEMP+KD+VSWNA+++GY
Sbjct: 190 KGLVEEARELFDEMEERNVESWNFMVSCYAAAGLVEEARECFDEMPVKDLVSWNAMVSGY 249
Query: 221 AHSNQFGQVLKLFEDM-QFANVKPDNYTLVNVLSACAQFGALKQGEWIHAYIDKNGINIH 45
A + +G+ L++F +M + +PD +T V+VLSACA G+L QGEW+ YIDK+G+ I
Sbjct: 250 ARAGCYGEALEVFNEMLKSCAEEPDGFTFVSVLSACANLGSLSQGEWVRVYIDKHGVEID 309
Query: 44 GFLATAFVDMYSKC 3
GFLATA VDMYSKC
Sbjct: 310 GFLATALVDMYSKC 323
Score = 86.7 bits (213), Expect = 3e-14
Identities = 68/240 (28%), Positives = 117/240 (48%), Gaps = 9/240 (3%)
Frame = -2
Query: 779 ASSVFSRIPNPSSYLWNTMIRSYANSCNPEESLLLFHQMLYD-SFYPDKFTYTFALKACS 603
A F +P WN M+ YA + E+L +F++ML + PD FT+ L AC+
Sbjct: 227 ARECFDEMPVKDLVSWNAMVSGYARAGCYGEALEVFNEMLKSCAEEPDGFTFVSVLSACA 286
Query: 602 FLLGIEEGRQIHGQILKTGNGFDCYIQNSLINLYARTGYFDNAYLLLDRMIQKDVISWNA 423
L + +G + I K G D ++ +L+++Y++ G D A + +KDV +WN+
Sbjct: 287 NLGSLSQGEWVRVYIDKHGVEIDGFLATALVDMYSKCGRIDKAVEVFRGASKKDVSTWNS 346
Query: 422 ILSAYTERGLMENARNLFEEMP----DKNVESWNFMISGYVGVELVEEARILFDEMPLKD 255
+++ + GL +A +F EM N ++ ++S V L+++AR LF+ M
Sbjct: 347 MITGLSVHGLGNDALEIFSEMVYEGFKPNSVTFIAVLSACNHVGLLDQARKLFETM--GS 404
Query: 254 VVSWNALITGY-AHSNQFGQVLKLFEDMQFAN-VKPD--NYTLVNVLSACAQFGALKQGE 87
V I Y + G++ + E + N V PD + L ++L AC +FG +Q E
Sbjct: 405 VYGVEPSIEHYGCMVDLLGRLGRFEEAEELVNKVPPDEASVLLESLLGACKRFGRTEQAE 464