BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver29_contig00048699
         (707 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_010656269.1| PREDICTED: probable RNA-dependent RNA polyme...   149   2e-33
ref|XP_010656270.1| PREDICTED: probable RNA-dependent RNA polyme...   149   2e-33
ref|XP_010249519.1| PREDICTED: probable RNA-dependent RNA polyme...   135   3e-29
ref|XP_010249518.1| PREDICTED: probable RNA-dependent RNA polyme...   135   3e-29
ref|XP_006380469.1| hypothetical protein POPTR_0007s06560g [Popu...   135   3e-29
ref|XP_006380470.1| hypothetical protein POPTR_0007s06560g [Popu...   131   4e-28
ref|XP_011025605.1| PREDICTED: probable RNA-dependent RNA polyme...   131   5e-28
ref|XP_006381765.1| hypothetical protein POPTR_0006s17780g [Popu...   128   4e-27
ref|XP_008791538.1| PREDICTED: probable RNA-dependent RNA polyme...   123   1e-25
ref|XP_008791522.1| PREDICTED: probable RNA-dependent RNA polyme...   123   1e-25
ref|XP_009385773.1| PREDICTED: probable RNA-dependent RNA polyme...   122   2e-25
ref|XP_009385772.1| PREDICTED: probable RNA-dependent RNA polyme...   122   2e-25
ref|XP_009385771.1| PREDICTED: probable RNA-dependent RNA polyme...   122   2e-25
ref|XP_010916733.1| PREDICTED: probable RNA-dependent RNA polyme...   120   9e-25
ref|XP_006451272.1| hypothetical protein CICLE_v10007331mg [Citr...   120   9e-25
ref|XP_013671950.1| PREDICTED: probable RNA-dependent RNA polyme...   119   1e-24
ref|XP_013671948.1| PREDICTED: probable RNA-dependent RNA polyme...   119   1e-24
emb|CDX82751.1| BnaC07g01150D [Brassica napus]                        119   1e-24
gb|KDO66531.1| hypothetical protein CISIN_1g001771mg [Citrus sin...   119   1e-24
ref|XP_006451271.1| hypothetical protein CICLE_v10007331mg [Citr...   119   1e-24

>ref|XP_010656269.1| PREDICTED: probable RNA-dependent RNA polymerase 5 isoform X1
           [Vitis vinifera]
          Length = 954

 Score =  149 bits (375), Expect = 2e-33
 Identities = 76/145 (52%), Positives = 102/145 (70%), Gaps = 3/145 (2%)
 Frame = -3

Query: 432 SSTEKMKRLTCNDPHLLGLGELEFKKMFLILSCCGKEYKLEDFISVDEILRMKSLQMDHF 253
           SST K  R   + P L+ LGELEF+K FLILS  G + + ED +S +EIL++K+L M  F
Sbjct: 87  SSTPKKARRQASSPQLVALGELEFRKAFLILSYIGDK-RPEDLLSAEEILKLKNLPMGVF 145

Query: 252 ETRLRNILGDNQYVKQTDRTKNLDWDSEKPFVCHCHVEPDGSYTFKGPYLQRDTTHLHRV 73
           ET + N LG  +++K+ DR ++ DWDS+K  + HCHV PDGSY FKGPYL +  THL RV
Sbjct: 146 ETEVWNNLG-RKFIKEEDRQRSFDWDSDKTHIYHCHVSPDGSYRFKGPYLNKTRTHLQRV 204

Query: 72  LGDDNVLLVKFSGNEGDR---DCSS 7
           LGD+N+LLVKF+ +  DR   +CS+
Sbjct: 205 LGDENILLVKFAEDVTDRSSLNCST 229


>ref|XP_010656270.1| PREDICTED: probable RNA-dependent RNA polymerase 5 isoform X2
           [Vitis vinifera] gi|297738765|emb|CBI28010.3| unnamed
           protein product [Vitis vinifera]
          Length = 929

 Score =  149 bits (375), Expect = 2e-33
 Identities = 76/145 (52%), Positives = 102/145 (70%), Gaps = 3/145 (2%)
 Frame = -3

Query: 432 SSTEKMKRLTCNDPHLLGLGELEFKKMFLILSCCGKEYKLEDFISVDEILRMKSLQMDHF 253
           SST K  R   + P L+ LGELEF+K FLILS  G + + ED +S +EIL++K+L M  F
Sbjct: 87  SSTPKKARRQASSPQLVALGELEFRKAFLILSYIGDK-RPEDLLSAEEILKLKNLPMGVF 145

Query: 252 ETRLRNILGDNQYVKQTDRTKNLDWDSEKPFVCHCHVEPDGSYTFKGPYLQRDTTHLHRV 73
           ET + N LG  +++K+ DR ++ DWDS+K  + HCHV PDGSY FKGPYL +  THL RV
Sbjct: 146 ETEVWNNLG-RKFIKEEDRQRSFDWDSDKTHIYHCHVSPDGSYRFKGPYLNKTRTHLQRV 204

Query: 72  LGDDNVLLVKFSGNEGDR---DCSS 7
           LGD+N+LLVKF+ +  DR   +CS+
Sbjct: 205 LGDENILLVKFAEDVTDRSSLNCST 229


>ref|XP_010249519.1| PREDICTED: probable RNA-dependent RNA polymerase 5 isoform X2
           [Nelumbo nucifera]
          Length = 1022

 Score =  135 bits (339), Expect = 3e-29
 Identities = 87/203 (42%), Positives = 121/203 (59%), Gaps = 2/203 (0%)
 Frame = -3

Query: 606 NQESVDCSELKKFDSSVSNSPR--DDVVTQRMRLEDPEKEKNKRMLNVDQPSNQMINLEY 433
           +++SV  S  +  +SSVS S R  DD  +   RLE   ++K+             + LE 
Sbjct: 78  SRKSVCFSGPRSSESSVSVSMRGYDDATSHSPRLERLNRQKSG------------LGLEG 125

Query: 432 SSTEKMKRLTCNDPHLLGLGELEFKKMFLILSCCGKEYKLEDFISVDEILRMKSLQMDHF 253
            S E +         L+ LGELEF+K FLILS  GK  +LED ++V+ I ++++L M  F
Sbjct: 126 MSRESL---------LMALGELEFRKAFLILSYIGKN-RLEDVMTVETIKKIRNLPMVKF 175

Query: 252 ETRLRNILGDNQYVKQTDRTKNLDWDSEKPFVCHCHVEPDGSYTFKGPYLQRDTTHLHRV 73
           E+ + N +G + YV+  DR K LDWDS K ++ HC V+PDGSY+FKGPYL    THL RV
Sbjct: 176 ESEVWNDIGCH-YVEHADRMKFLDWDSGKTYLYHCLVDPDGSYSFKGPYLDTKKTHLQRV 234

Query: 72  LGDDNVLLVKFSGNEGDRDCSSS 4
           LGDD VL+VKF     +R+ S+S
Sbjct: 235 LGDDKVLIVKFIQESTNRNGSTS 257


>ref|XP_010249518.1| PREDICTED: probable RNA-dependent RNA polymerase 3 isoform X1
           [Nelumbo nucifera]
          Length = 1045

 Score =  135 bits (339), Expect = 3e-29
 Identities = 87/203 (42%), Positives = 121/203 (59%), Gaps = 2/203 (0%)
 Frame = -3

Query: 606 NQESVDCSELKKFDSSVSNSPR--DDVVTQRMRLEDPEKEKNKRMLNVDQPSNQMINLEY 433
           +++SV  S  +  +SSVS S R  DD  +   RLE   ++K+             + LE 
Sbjct: 78  SRKSVCFSGPRSSESSVSVSMRGYDDATSHSPRLERLNRQKSG------------LGLEG 125

Query: 432 SSTEKMKRLTCNDPHLLGLGELEFKKMFLILSCCGKEYKLEDFISVDEILRMKSLQMDHF 253
            S E +         L+ LGELEF+K FLILS  GK  +LED ++V+ I ++++L M  F
Sbjct: 126 MSRESL---------LMALGELEFRKAFLILSYIGKN-RLEDVMTVETIKKIRNLPMVKF 175

Query: 252 ETRLRNILGDNQYVKQTDRTKNLDWDSEKPFVCHCHVEPDGSYTFKGPYLQRDTTHLHRV 73
           E+ + N +G + YV+  DR K LDWDS K ++ HC V+PDGSY+FKGPYL    THL RV
Sbjct: 176 ESEVWNDIGCH-YVEHADRMKFLDWDSGKTYLYHCLVDPDGSYSFKGPYLDTKKTHLQRV 234

Query: 72  LGDDNVLLVKFSGNEGDRDCSSS 4
           LGDD VL+VKF     +R+ S+S
Sbjct: 235 LGDDKVLIVKFIQESTNRNGSTS 257


>ref|XP_006380469.1| hypothetical protein POPTR_0007s06560g [Populus trichocarpa]
           gi|550334279|gb|ERP58266.1| hypothetical protein
           POPTR_0007s06560g [Populus trichocarpa]
          Length = 899

 Score =  135 bits (339), Expect = 3e-29
 Identities = 75/152 (49%), Positives = 96/152 (63%), Gaps = 5/152 (3%)
 Frame = -3

Query: 447 INLEYSSTEKMKRLTCNDP----HLLGLGELEFKKMFLILSCCGKEYKLEDFISVDEILR 280
           + LE SST   +R   N+     HL+ LGELEF+K FLILS  G +  LE+ +SVD+I  
Sbjct: 15  LKLEGSSTMDSQRQRGNESTTSQHLVALGELEFRKAFLILSYLGGK-NLEEVVSVDQIRG 73

Query: 279 MKSLQMDHFETRLRNILGDNQ-YVKQTDRTKNLDWDSEKPFVCHCHVEPDGSYTFKGPYL 103
            K L M  FE+++    G  + Y+K+ DR K LDWDS K  + HCHV+PDGSY FKGPYL
Sbjct: 74  YKDLPMRTFESKIWEAFGCRRDYIKEEDRVKYLDWDSGKTHIYHCHVDPDGSYRFKGPYL 133

Query: 102 QRDTTHLHRVLGDDNVLLVKFSGNEGDRDCSS 7
            +    L R LGDDN+L+VKF   + DRD  S
Sbjct: 134 SKLRNVLQRTLGDDNILMVKFGEVKDDRDSGS 165


>ref|XP_006380470.1| hypothetical protein POPTR_0007s06560g [Populus trichocarpa]
           gi|550334280|gb|ERP58267.1| hypothetical protein
           POPTR_0007s06560g [Populus trichocarpa]
          Length = 877

 Score =  131 bits (330), Expect = 4e-28
 Identities = 68/129 (52%), Positives = 86/129 (66%), Gaps = 1/129 (0%)
 Frame = -3

Query: 390 HLLGLGELEFKKMFLILSCCGKEYKLEDFISVDEILRMKSLQMDHFETRLRNILGDNQ-Y 214
           HL+ LGELEF+K FLILS  G +  LE+ +SVD+I   K L M  FE+++    G  + Y
Sbjct: 16  HLVALGELEFRKAFLILSYLGGK-NLEEVVSVDQIRGYKDLPMRTFESKIWEAFGCRRDY 74

Query: 213 VKQTDRTKNLDWDSEKPFVCHCHVEPDGSYTFKGPYLQRDTTHLHRVLGDDNVLLVKFSG 34
           +K+ DR K LDWDS K  + HCHV+PDGSY FKGPYL +    L R LGDDN+L+VKF  
Sbjct: 75  IKEEDRVKYLDWDSGKTHIYHCHVDPDGSYRFKGPYLSKLRNVLQRTLGDDNILMVKFGE 134

Query: 33  NEGDRDCSS 7
            + DRD  S
Sbjct: 135 VKDDRDSGS 143


>ref|XP_011025605.1| PREDICTED: probable RNA-dependent RNA polymerase 5 [Populus
           euphratica] gi|743837972|ref|XP_011025606.1| PREDICTED:
           probable RNA-dependent RNA polymerase 5 [Populus
           euphratica]
          Length = 1010

 Score =  131 bits (329), Expect = 5e-28
 Identities = 81/207 (39%), Positives = 113/207 (54%), Gaps = 16/207 (7%)
 Frame = -3

Query: 576 KKFDSSVSNSPRDDVVTQRMRLEDPEKEKNKR-------MLNVDQPSNQM----INLEYS 430
           K+F  ++S S     +   +    P++ KN+        ++N    S       + LE S
Sbjct: 73  KQFSPNISASSSSPNINSSLS-PSPQQPKNRSPITPTRLLMNSQSDSGAQSPIPLKLEGS 131

Query: 429 STEKMKRLTCNDP----HLLGLGELEFKKMFLILSCCGKEYKLEDFISVDEILRMKSLQM 262
            T   +R   N+     HL+ LGELEF+K FLIL+  G +  LE+ +S D+I   K L M
Sbjct: 132 PTMDSQRQRGNESTTSQHLMALGELEFRKAFLILNYLGGK-NLEEVVSADQIRGYKDLPM 190

Query: 261 DHFETRLRNILGDNQ-YVKQTDRTKNLDWDSEKPFVCHCHVEPDGSYTFKGPYLQRDTTH 85
             FE+++    G  + Y+K+ DR K  DWDS K  + HCHV+PDGSY FKGPYL +    
Sbjct: 191 IIFESKIWEAFGCRRDYIKEEDRVKYPDWDSGKTHIYHCHVDPDGSYRFKGPYLSKLRNV 250

Query: 84  LHRVLGDDNVLLVKFSGNEGDRDCSSS 4
           L R LGDDN+L+VKF   + DRD  SS
Sbjct: 251 LQRTLGDDNILMVKFGEEKDDRDSGSS 277


>ref|XP_006381765.1| hypothetical protein POPTR_0006s17780g [Populus trichocarpa]
           gi|550336519|gb|ERP59562.1| hypothetical protein
           POPTR_0006s17780g [Populus trichocarpa]
          Length = 866

 Score =  128 bits (321), Expect = 4e-27
 Identities = 65/130 (50%), Positives = 87/130 (66%), Gaps = 1/130 (0%)
 Frame = -3

Query: 390 HLLGLGELEFKKMFLILSCCGKEYKLEDFISVDEILRMKSLQMDHFETRLRNILGDNQ-Y 214
           HL+ LGELEF+K FLIL+  G +  LE+ +S D+I   K L M+ FE+++ +  G  + Y
Sbjct: 16  HLVALGELEFRKAFLILNYLGGK-NLEEVVSADQIRGYKDLPMETFESKIWDAFGCRRDY 74

Query: 213 VKQTDRTKNLDWDSEKPFVCHCHVEPDGSYTFKGPYLQRDTTHLHRVLGDDNVLLVKFSG 34
           +K+ DR K LDWDS K  + HCHV+PDGSY FKGPYL +    L R LGDDN+L+VKF  
Sbjct: 75  IKEEDRVKYLDWDSGKAHIYHCHVDPDGSYRFKGPYLSKQRNVLQRTLGDDNILMVKFEE 134

Query: 33  NEGDRDCSSS 4
            + +R   SS
Sbjct: 135 VKDERYSVSS 144


>ref|XP_008791538.1| PREDICTED: probable RNA-dependent RNA polymerase 3 isoform X3
           [Phoenix dactylifera]
          Length = 957

 Score =  123 bits (308), Expect = 1e-25
 Identities = 69/118 (58%), Positives = 79/118 (66%)
 Frame = -3

Query: 393 PHLLGLGELEFKKMFLILSCCGKEYKLEDFISVDEILRMKSLQMDHFETRLRNILGDNQY 214
           P +  LGELEF K FLILS  GK   LE+ ISV  I R+K   M  FE  +   LG ++Y
Sbjct: 133 PQMEALGELEFMKAFLILSYIGKS-SLENAISVGFIQRIKFFPMSLFELEVWRELG-HKY 190

Query: 213 VKQTDRTKNLDWDSEKPFVCHCHVEPDGSYTFKGPYLQRDTTHLHRVLGDDNVLLVKF 40
           +  +DR KNLDWDS K  V HC V+ DG+Y FKGPYLQ   THL RVLGDDNVLLVKF
Sbjct: 191 ISDSDRRKNLDWDSGKTHVYHCCVDLDGTYIFKGPYLQVTKTHLQRVLGDDNVLLVKF 248


>ref|XP_008791522.1| PREDICTED: probable RNA-dependent RNA polymerase 5 isoform X1
           [Phoenix dactylifera]
          Length = 1006

 Score =  123 bits (308), Expect = 1e-25
 Identities = 69/118 (58%), Positives = 79/118 (66%)
 Frame = -3

Query: 393 PHLLGLGELEFKKMFLILSCCGKEYKLEDFISVDEILRMKSLQMDHFETRLRNILGDNQY 214
           P +  LGELEF K FLILS  GK   LE+ ISV  I R+K   M  FE  +   LG ++Y
Sbjct: 133 PQMEALGELEFMKAFLILSYIGKS-SLENAISVGFIQRIKFFPMSLFELEVWRELG-HKY 190

Query: 213 VKQTDRTKNLDWDSEKPFVCHCHVEPDGSYTFKGPYLQRDTTHLHRVLGDDNVLLVKF 40
           +  +DR KNLDWDS K  V HC V+ DG+Y FKGPYLQ   THL RVLGDDNVLLVKF
Sbjct: 191 ISDSDRRKNLDWDSGKTHVYHCCVDLDGTYIFKGPYLQVTKTHLQRVLGDDNVLLVKF 248


>ref|XP_009385773.1| PREDICTED: probable RNA-dependent RNA polymerase 5 isoform X3 [Musa
           acuminata subsp. malaccensis]
          Length = 947

 Score =  122 bits (306), Expect = 2e-25
 Identities = 66/131 (50%), Positives = 88/131 (67%), Gaps = 1/131 (0%)
 Frame = -3

Query: 393 PHLLGLGELEFKKMFLILSCCGKEYKLEDFISVDEILRMKSLQMDHFETRLRNILGDNQY 214
           P L+ LG LEF+K FLILS  G+  KLE+ ISVD I +++   M  FE  +   +G ++ 
Sbjct: 128 PQLVALGRLEFRKAFLILSYIGRN-KLEEMISVDFIEKIQLWPMKQFELEVWKEVG-SKC 185

Query: 213 VKQTDRTKNLDWDSEKPFVCHCHVEPDGSYTFKGPYLQRDTTHLHRVLGDDNVLLVKFSG 34
           + + DR KN+DWDS K  V HCHV+ + ++TFKGPYLQ   THL R+LGDDNVLLVKF+ 
Sbjct: 186 ISELDRRKNMDWDSGKAHVYHCHVDLERNFTFKGPYLQLQRTHLQRILGDDNVLLVKFTD 245

Query: 33  N-EGDRDCSSS 4
              G++  S S
Sbjct: 246 EMSGEKRSSCS 256


>ref|XP_009385772.1| PREDICTED: probable RNA-dependent RNA polymerase 5 isoform X2 [Musa
           acuminata subsp. malaccensis]
          Length = 995

 Score =  122 bits (306), Expect = 2e-25
 Identities = 66/131 (50%), Positives = 88/131 (67%), Gaps = 1/131 (0%)
 Frame = -3

Query: 393 PHLLGLGELEFKKMFLILSCCGKEYKLEDFISVDEILRMKSLQMDHFETRLRNILGDNQY 214
           P L+ LG LEF+K FLILS  G+  KLE+ ISVD I +++   M  FE  +   +G ++ 
Sbjct: 127 PQLVALGRLEFRKAFLILSYIGRN-KLEEMISVDFIEKIQLWPMKQFELEVWKEVG-SKC 184

Query: 213 VKQTDRTKNLDWDSEKPFVCHCHVEPDGSYTFKGPYLQRDTTHLHRVLGDDNVLLVKFSG 34
           + + DR KN+DWDS K  V HCHV+ + ++TFKGPYLQ   THL R+LGDDNVLLVKF+ 
Sbjct: 185 ISELDRRKNMDWDSGKAHVYHCHVDLERNFTFKGPYLQLQRTHLQRILGDDNVLLVKFTD 244

Query: 33  N-EGDRDCSSS 4
              G++  S S
Sbjct: 245 EMSGEKRSSCS 255


>ref|XP_009385771.1| PREDICTED: probable RNA-dependent RNA polymerase 5 isoform X1 [Musa
           acuminata subsp. malaccensis]
          Length = 996

 Score =  122 bits (306), Expect = 2e-25
 Identities = 66/131 (50%), Positives = 88/131 (67%), Gaps = 1/131 (0%)
 Frame = -3

Query: 393 PHLLGLGELEFKKMFLILSCCGKEYKLEDFISVDEILRMKSLQMDHFETRLRNILGDNQY 214
           P L+ LG LEF+K FLILS  G+  KLE+ ISVD I +++   M  FE  +   +G ++ 
Sbjct: 128 PQLVALGRLEFRKAFLILSYIGRN-KLEEMISVDFIEKIQLWPMKQFELEVWKEVG-SKC 185

Query: 213 VKQTDRTKNLDWDSEKPFVCHCHVEPDGSYTFKGPYLQRDTTHLHRVLGDDNVLLVKFSG 34
           + + DR KN+DWDS K  V HCHV+ + ++TFKGPYLQ   THL R+LGDDNVLLVKF+ 
Sbjct: 186 ISELDRRKNMDWDSGKAHVYHCHVDLERNFTFKGPYLQLQRTHLQRILGDDNVLLVKFTD 245

Query: 33  N-EGDRDCSSS 4
              G++  S S
Sbjct: 246 EMSGEKRSSCS 256


>ref|XP_010916733.1| PREDICTED: probable RNA-dependent RNA polymerase 3 [Elaeis
           guineensis]
          Length = 809

 Score =  120 bits (301), Expect = 9e-25
 Identities = 67/119 (56%), Positives = 80/119 (67%)
 Frame = -3

Query: 393 PHLLGLGELEFKKMFLILSCCGKEYKLEDFISVDEILRMKSLQMDHFETRLRNILGDNQY 214
           P +  LGELEF+K FLILS  GK   LE  ISV  I R+K   M  FE+ +   +G ++Y
Sbjct: 133 PQMEALGELEFRKAFLILSYIGKS-SLESAISVGFIQRIKFFPMALFESEVWREIG-HKY 190

Query: 213 VKQTDRTKNLDWDSEKPFVCHCHVEPDGSYTFKGPYLQRDTTHLHRVLGDDNVLLVKFS 37
           +  +DR K LDWDS K  V HC V+ DG+Y FKGPYLQ   THL RVLGDDNVLLVKF+
Sbjct: 191 ISDSDRRKALDWDSGKTHVYHCCVDLDGTYIFKGPYLQVTKTHLQRVLGDDNVLLVKFA 249


>ref|XP_006451272.1| hypothetical protein CICLE_v10007331mg [Citrus clementina]
           gi|568843311|ref|XP_006475557.1| PREDICTED: probable
           RNA-dependent RNA polymerase 3-like isoform X2 [Citrus
           sinensis] gi|557554498|gb|ESR64512.1| hypothetical
           protein CICLE_v10007331mg [Citrus clementina]
          Length = 1013

 Score =  120 bits (301), Expect = 9e-25
 Identities = 84/216 (38%), Positives = 111/216 (51%), Gaps = 3/216 (1%)
 Frame = -3

Query: 642 KYRLVTQSDESVNQESVDCSELKK--FDSSVSNSPRDDVVTQRMRLED-PEKEKNKRMLN 472
           KY      +  V + + + S LK+  F  S     R  V    +RL + P+    K+   
Sbjct: 64  KYSFSGYINYLVKKRNNNGSPLKRVCFSPSSPQQNRSPVTVTTVRLLNLPQDYVVKQSPV 123

Query: 471 VDQPSNQMINLEYSSTEKMKRLTCNDPHLLGLGELEFKKMFLILSCCGKEYKLEDFISVD 292
            DQ   Q      SS     R   + P  + LGELEF+K FLILS  G E  LE+ I+ D
Sbjct: 124 ADQ---QPRGSPMSSISHAMRHRASIPQYVALGELEFRKAFLILSYIG-ENSLEEVITAD 179

Query: 291 EILRMKSLQMDHFETRLRNILGDNQYVKQTDRTKNLDWDSEKPFVCHCHVEPDGSYTFKG 112
           EI  M+ LQM  FE+ +   LG  + + Q DR  +L WDS K  + HCH+   G+ TFKG
Sbjct: 180 EIRGMRDLQMARFESEVWEKLG-RKNISQEDRRMSLKWDSGKTHMYHCHISTKGNCTFKG 238

Query: 111 PYLQRDTTHLHRVLGDDNVLLVKFSGNEGDRDCSSS 4
           PYL +  THL R LGDDN+LLVKF    G    S++
Sbjct: 239 PYLNQTRTHLQRELGDDNILLVKFDEELGGHRSSNN 274


>ref|XP_013671950.1| PREDICTED: probable RNA-dependent RNA polymerase 5 isoform X3
           [Brassica napus]
          Length = 991

 Score =  119 bits (299), Expect = 1e-24
 Identities = 78/192 (40%), Positives = 106/192 (55%), Gaps = 3/192 (1%)
 Frame = -3

Query: 567 DSSVSNSPRDDVVTQRMRLEDPEKEKNKRMLNVDQPSNQMINLE-YSSTEKMKRLTCNDP 391
           D +++ SP+      R+RL +      +  L+ + PS + +  E Y  ++ +       P
Sbjct: 85  DQAINGSPQSPPARHRLRLRE------EMSLDSEAPSPKCMKRESYEGSQHIP------P 132

Query: 390 HLLGLGELEFKKMFLILSCC-GKEYKLEDFISVDEILRMKSLQMDHFETRLRNILGDNQY 214
            +L LGELEFKK FL+LS   GK   L   I+ DEI++ K L M  +E  +   LG + Y
Sbjct: 133 EILALGELEFKKAFLLLSYIPGKS--LAQVITADEIMQWKDLSMVAYEAVVWERLGKD-Y 189

Query: 213 VKQTDRTKNLDWDSEKPFVCHCHVEPDGSYTFKGPYLQRDTTHLHRVLGDDNVLLVKFSG 34
              TDRT  L+WDS K     CHV  DGSYT KGP L+   THLH+VLGDDNVL VKF+ 
Sbjct: 190 CSPTDRTVALEWDSGKTHYYQCHVALDGSYTLKGPLLEPTGTHLHKVLGDDNVLTVKFAD 249

Query: 33  NEG-DRDCSSSP 1
            +     CS+ P
Sbjct: 250 VQNKSSTCSNDP 261


>ref|XP_013671948.1| PREDICTED: probable RNA-dependent RNA polymerase 5 isoform X1
           [Brassica napus]
          Length = 993

 Score =  119 bits (299), Expect = 1e-24
 Identities = 78/192 (40%), Positives = 106/192 (55%), Gaps = 3/192 (1%)
 Frame = -3

Query: 567 DSSVSNSPRDDVVTQRMRLEDPEKEKNKRMLNVDQPSNQMINLE-YSSTEKMKRLTCNDP 391
           D +++ SP+      R+RL +      +  L+ + PS + +  E Y  ++ +       P
Sbjct: 85  DQAINGSPQSPPARHRLRLRE------EMSLDSEAPSPKCMKRESYEGSQHIP------P 132

Query: 390 HLLGLGELEFKKMFLILSCC-GKEYKLEDFISVDEILRMKSLQMDHFETRLRNILGDNQY 214
            +L LGELEFKK FL+LS   GK   L   I+ DEI++ K L M  +E  +   LG + Y
Sbjct: 133 EILALGELEFKKAFLLLSYIPGKS--LAQVITADEIMQWKDLSMVAYEAVVWERLGKD-Y 189

Query: 213 VKQTDRTKNLDWDSEKPFVCHCHVEPDGSYTFKGPYLQRDTTHLHRVLGDDNVLLVKFSG 34
              TDRT  L+WDS K     CHV  DGSYT KGP L+   THLH+VLGDDNVL VKF+ 
Sbjct: 190 CSPTDRTVALEWDSGKTHYYQCHVALDGSYTLKGPLLEPTGTHLHKVLGDDNVLTVKFAD 249

Query: 33  NEG-DRDCSSSP 1
            +     CS+ P
Sbjct: 250 VQNKSSTCSNDP 261


>emb|CDX82751.1| BnaC07g01150D [Brassica napus]
          Length = 977

 Score =  119 bits (299), Expect = 1e-24
 Identities = 78/192 (40%), Positives = 106/192 (55%), Gaps = 3/192 (1%)
 Frame = -3

Query: 567 DSSVSNSPRDDVVTQRMRLEDPEKEKNKRMLNVDQPSNQMINLE-YSSTEKMKRLTCNDP 391
           D +++ SP+      R+RL +      +  L+ + PS + +  E Y  ++ +       P
Sbjct: 85  DQAINGSPQSPPARHRLRLRE------EMSLDSEAPSPKCMKRESYEGSQHIP------P 132

Query: 390 HLLGLGELEFKKMFLILSCC-GKEYKLEDFISVDEILRMKSLQMDHFETRLRNILGDNQY 214
            +L LGELEFKK FL+LS   GK   L   I+ DEI++ K L M  +E  +   LG + Y
Sbjct: 133 EILALGELEFKKAFLLLSYIPGKS--LAQVITADEIMQWKDLSMVAYEAVVWERLGKD-Y 189

Query: 213 VKQTDRTKNLDWDSEKPFVCHCHVEPDGSYTFKGPYLQRDTTHLHRVLGDDNVLLVKFSG 34
              TDRT  L+WDS K     CHV  DGSYT KGP L+   THLH+VLGDDNVL VKF+ 
Sbjct: 190 CSPTDRTVALEWDSGKTHYYQCHVALDGSYTLKGPLLEPTGTHLHKVLGDDNVLTVKFAD 249

Query: 33  NEG-DRDCSSSP 1
            +     CS+ P
Sbjct: 250 VQNKSSTCSNDP 261


>gb|KDO66531.1| hypothetical protein CISIN_1g001771mg [Citrus sinensis]
          Length = 1015

 Score =  119 bits (299), Expect = 1e-24
 Identities = 67/143 (46%), Positives = 85/143 (59%)
 Frame = -3

Query: 432 SSTEKMKRLTCNDPHLLGLGELEFKKMFLILSCCGKEYKLEDFISVDEILRMKSLQMDHF 253
           SS     R   + P  + LGELEF+K FLILS  G E  LE+ I+ DEI  M+ LQM  F
Sbjct: 136 SSISHAMRHRASIPQYVALGELEFRKAFLILSYIG-ENSLEEVITADEIRGMRDLQMARF 194

Query: 252 ETRLRNILGDNQYVKQTDRTKNLDWDSEKPFVCHCHVEPDGSYTFKGPYLQRDTTHLHRV 73
           E+ +   LG  + + Q DR  +L WDS K  + HCH+   G+ TFKGPYL +  THL R 
Sbjct: 195 ESEVWEKLG-RKNISQEDRRMSLKWDSGKTHMYHCHISTKGNCTFKGPYLNQTRTHLQRE 253

Query: 72  LGDDNVLLVKFSGNEGDRDCSSS 4
           LGDDN+LLVKF    G    S++
Sbjct: 254 LGDDNILLVKFDEELGGHRSSNN 276


>ref|XP_006451271.1| hypothetical protein CICLE_v10007331mg [Citrus clementina]
           gi|568843309|ref|XP_006475556.1| PREDICTED: probable
           RNA-dependent RNA polymerase 3-like isoform X1 [Citrus
           sinensis] gi|557554497|gb|ESR64511.1| hypothetical
           protein CICLE_v10007331mg [Citrus clementina]
          Length = 1015

 Score =  119 bits (299), Expect = 1e-24
 Identities = 67/143 (46%), Positives = 85/143 (59%)
 Frame = -3

Query: 432 SSTEKMKRLTCNDPHLLGLGELEFKKMFLILSCCGKEYKLEDFISVDEILRMKSLQMDHF 253
           SS     R   + P  + LGELEF+K FLILS  G E  LE+ I+ DEI  M+ LQM  F
Sbjct: 136 SSISHAMRHRASIPQYVALGELEFRKAFLILSYIG-ENSLEEVITADEIRGMRDLQMARF 194

Query: 252 ETRLRNILGDNQYVKQTDRTKNLDWDSEKPFVCHCHVEPDGSYTFKGPYLQRDTTHLHRV 73
           E+ +   LG  + + Q DR  +L WDS K  + HCH+   G+ TFKGPYL +  THL R 
Sbjct: 195 ESEVWEKLG-RKNISQEDRRMSLKWDSGKTHMYHCHISTKGNCTFKGPYLNQTRTHLQRE 253

Query: 72  LGDDNVLLVKFSGNEGDRDCSSS 4
           LGDDN+LLVKF    G    S++
Sbjct: 254 LGDDNILLVKFDEELGGHRSSNN 276