BLASTX nr result
ID: Papaver29_contig00046847
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Papaver29_contig00046847
(539 letters)
Database: ./nr
77,306,371 sequences; 28,104,191,420 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CAN66637.1| hypothetical protein VITISV_011340 [Vitis vinifera] 141 1e-42
emb|CAN73567.1| hypothetical protein VITISV_003451 [Vitis vinifera] 141 6e-42
gb|ABF95851.1| retrotransposon protein, putative, Ty1-copia subc... 142 9e-40
gb|AAR13298.1| gag-pol polyprotein [Phaseolus vulgaris] 124 1e-37
gb|AAP94586.1| putative retrotransposon RIRE1 poly protein [Zea ... 137 9e-37
emb|CAN76565.1| hypothetical protein VITISV_010942 [Vitis vinifera] 121 2e-36
gb|EEE51974.1| hypothetical protein OsJ_33644 [Oryza sativa Japo... 134 2e-36
gb|ABF96702.1| retrotransposon protein, putative, Ty1-copia subc... 134 3e-36
gb|AAP20858.1| retrotransposon protein, putative, Ty1-copia sub-... 134 3e-36
gb|ABA91250.1| retrotransposon protein, putative, Ty1-copia subc... 134 4e-36
gb|ADN33807.1| ty1-copia retrotransposon protein [Cucumis melo s... 123 4e-36
gb|AAV24814.1| putative polyprotein [Oryza sativa Japonica Group] 133 7e-36
gb|AAN64998.1| Putative gag-pol polyprotein [Oryza sativa Japoni... 136 7e-36
gb|AAT39267.1| putative polyprotein [Oryza sativa Japonica Group... 132 1e-35
gb|AAT38766.2| Polyprotein, putative [Solanum demissum] 119 6e-35
gb|ABA93820.1| retrotransposon protein, putative, Ty1-copia subc... 130 1e-34
gb|ABA97555.1| retrotransposon protein, putative, Ty1-copia subc... 132 1e-34
gb|AAM22635.1|AF434192_2 Gag and Pol [Zea mays] 132 1e-34
gb|ABG22485.1| retrotransposon protein, putative, Ty1-copia subc... 129 3e-34
emb|CAN62130.1| hypothetical protein VITISV_019730 [Vitis vinifera] 112 4e-34
>emb|CAN66637.1| hypothetical protein VITISV_011340 [Vitis vinifera]
Length = 1316
Score = 141 bits (356), Expect(2) = 1e-42
Identities = 62/101 (61%), Positives = 82/101 (81%)
Frame = +3
Query: 129 GEAVLSACYILNRVPFKGSDKTPYELWKGRQPSFAYFKVWGCLAKVHIPKPKSTKIGPKT 308
GEA+L+A Y+LN+VP K ++KTPYELWKGR+PS+ Y ++WGCLAKV +P PK KIGPKT
Sbjct: 657 GEAILTANYLLNKVPKKKAEKTPYELWKGRKPSYTYLRMWGCLAKVAVPPPKKVKIGPKT 716
Query: 309 VDCVFIGYPEHTPAYRFMVVSSDISEIGVNTIMDSRDAVCF 431
+DC+FIGY ++ AYRF+V S+I +I NTIM+SR+A F
Sbjct: 717 IDCIFIGYAHNSNAYRFLVYESNIPDIHKNTIMESRNASFF 757
Score = 58.5 bits (140), Expect(2) = 1e-42
Identities = 29/41 (70%), Positives = 31/41 (75%)
Frame = +1
Query: 7 SPYSPQSYSVVERKNRTLKEMMNVMLISSGLPSNLCVCGWG 129
+PYSPQS V ERKNRTLKEMMN MLISS LP N+ WG
Sbjct: 621 APYSPQSNGVAERKNRTLKEMMNAMLISSSLPQNM----WG 657
>emb|CAN73567.1| hypothetical protein VITISV_003451 [Vitis vinifera]
Length = 1277
Score = 141 bits (356), Expect(2) = 6e-42
Identities = 62/101 (61%), Positives = 82/101 (81%)
Frame = +3
Query: 129 GEAVLSACYILNRVPFKGSDKTPYELWKGRQPSFAYFKVWGCLAKVHIPKPKSTKIGPKT 308
GEA+L+A Y+LN+VP K ++KTPYELWKGR+PS+ Y ++WGCLAKV +P PK KIGPKT
Sbjct: 657 GEAILTANYLLNKVPKKKAEKTPYELWKGRKPSYTYLRMWGCLAKVAVPPPKKVKIGPKT 716
Query: 309 VDCVFIGYPEHTPAYRFMVVSSDISEIGVNTIMDSRDAVCF 431
+DC+FIGY ++ AYRF+V S+I +I NTIM+SR+A F
Sbjct: 717 IDCIFIGYAHNSNAYRFLVYESNIPDIHKNTIMESRNASFF 757
Score = 56.2 bits (134), Expect(2) = 6e-42
Identities = 28/41 (68%), Positives = 30/41 (73%)
Frame = +1
Query: 7 SPYSPQSYSVVERKNRTLKEMMNVMLISSGLPSNLCVCGWG 129
+PYSPQS V ERKNRTLKEMMN MLIS LP N+ WG
Sbjct: 621 TPYSPQSNGVAERKNRTLKEMMNAMLISFSLPQNM----WG 657
>gb|ABF95851.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1075
Score = 142 bits (359), Expect(2) = 9e-40
Identities = 62/104 (59%), Positives = 84/104 (80%)
Frame = +3
Query: 120 WVGGEAVLSACYILNRVPFKGSDKTPYELWKGRQPSFAYFKVWGCLAKVHIPKPKSTKIG 299
++ GEA+ +AC++LNRVP KG++ TPYELWKGR+P+ + KVWGCLAKV+IP K K+G
Sbjct: 520 YMWGEALYTACFVLNRVPAKGTEVTPYELWKGRKPNLNFLKVWGCLAKVNIPVVKKRKLG 579
Query: 300 PKTVDCVFIGYPEHTPAYRFMVVSSDISEIGVNTIMDSRDAVCF 431
PKTVDCVFIGY +++ AYRF+VV S+ +E+ NT+M+SRD F
Sbjct: 580 PKTVDCVFIGYAQNSLAYRFLVVKSETTEVRENTVMESRDTTFF 623
Score = 47.8 bits (112), Expect(2) = 9e-40
Identities = 24/43 (55%), Positives = 29/43 (67%)
Frame = +1
Query: 10 PYSPQSYSVVERKNRTLKEMMNVMLISSGLPSNLCVCGWGGKL 138
PYSPQS V ERKNRTL ++N ML +SGLP+ + WG L
Sbjct: 488 PYSPQSNGVAERKNRTLTNLVNAMLSNSGLPNYM----WGEAL 526
>gb|AAR13298.1| gag-pol polyprotein [Phaseolus vulgaris]
Length = 1290
Score = 124 bits (312), Expect(3) = 1e-37
Identities = 56/101 (55%), Positives = 78/101 (77%)
Frame = +3
Query: 129 GEAVLSACYILNRVPFKGSDKTPYELWKGRQPSFAYFKVWGCLAKVHIPKPKSTKIGPKT 308
GE++L+AC++ NR+P + + KTPYELWKG QP+ Y +VWG LAKV +P PK KIG KT
Sbjct: 619 GESLLTACFLQNRIPHRKTGKTPYELWKGYQPNLKYLRVWGSLAKVMLPDPKKRKIGSKT 678
Query: 309 VDCVFIGYPEHTPAYRFMVVSSDISEIGVNTIMDSRDAVCF 431
DC+F+GY EH+ AYRF+V++SDI E NTI+++++A F
Sbjct: 679 SDCMFLGYAEHSAAYRFLVLNSDIIE--RNTIVETKNAEFF 717
Score = 56.6 bits (135), Expect(3) = 1e-37
Identities = 29/43 (67%), Positives = 30/43 (69%)
Frame = +1
Query: 10 PYSPQSYSVVERKNRTLKEMMNVMLISSGLPSNLCVCGWGGKL 138
PYSP+S V ERKNRTLKEMMN MLISS P NL WG L
Sbjct: 584 PYSPESNGVAERKNRTLKEMMNAMLISSNAPDNL----WGESL 622
Score = 22.7 bits (47), Expect(3) = 1e-37
Identities = 12/29 (41%), Positives = 15/29 (51%)
Frame = +2
Query: 428 FFENVIPLKSDSRNRGVDPLDVPSTSQTL 514
FFE++ PLKS G + S S TL
Sbjct: 716 FFEHIFPLKSS----GTSEQPIDSVSDTL 740
>gb|AAP94586.1| putative retrotransposon RIRE1 poly protein [Zea mays]
Length = 1309
Score = 137 bits (344), Expect(2) = 9e-37
Identities = 62/106 (58%), Positives = 82/106 (77%)
Frame = +3
Query: 129 GEAVLSACYILNRVPFKGSDKTPYELWKGRQPSFAYFKVWGCLAKVHIPKPKSTKIGPKT 308
GEAVL+ CY+LNRVP + + TPYE +KGR+P ++ + WGCLAKV++P PK K+GPKT
Sbjct: 637 GEAVLTVCYVLNRVPPRNREATPYEGFKGRKPDLSHLRTWGCLAKVNVPLPKKRKLGPKT 696
Query: 309 VDCVFIGYPEHTPAYRFMVVSSDISEIGVNTIMDSRDAVCFLKMLF 446
VDCVF+GY ++ AYRF+VV S+ SEI VN IM+SRD V F + +F
Sbjct: 697 VDCVFLGYAHNSAAYRFLVVHSETSEIAVNVIMESRD-VTFFESIF 741
Score = 43.5 bits (101), Expect(2) = 9e-37
Identities = 19/32 (59%), Positives = 25/32 (78%)
Frame = +1
Query: 7 SPYSPQSYSVVERKNRTLKEMMNVMLISSGLP 102
+PYSPQS V ERKNRT+ ++ N +L SSG+P
Sbjct: 601 APYSPQSNGVAERKNRTVCDLANALLQSSGMP 632
>emb|CAN76565.1| hypothetical protein VITISV_010942 [Vitis vinifera]
Length = 839
Score = 121 bits (303), Expect(2) = 2e-36
Identities = 55/100 (55%), Positives = 72/100 (72%)
Frame = +3
Query: 132 EAVLSACYILNRVPFKGSDKTPYELWKGRQPSFAYFKVWGCLAKVHIPKPKSTKIGPKTV 311
EA+L A +ILN++P K D T YELWKG +PS+ Y KVW CL KV + KPK KIGPKT+
Sbjct: 314 EAILFANHILNKIPHKNKDVTSYELWKGHKPSYKYLKVWECLTKVVLQKPKQVKIGPKTI 373
Query: 312 DCVFIGYPEHTPAYRFMVVSSDISEIGVNTIMDSRDAVCF 431
DC+FIGY ++ AY F+V S I +I +TI++SR+A F
Sbjct: 374 DCIFIGYANNSSAYHFLVHKSSIPDIHEDTIIESRNASFF 413
Score = 58.2 bits (139), Expect(2) = 2e-36
Identities = 29/36 (80%), Positives = 30/36 (83%)
Frame = +1
Query: 4 ISPYSPQSYSVVERKNRTLKEMMNVMLISSGLPSNL 111
I+PYSPQS SV E KN TLKEMMN MLISSGLP NL
Sbjct: 276 IAPYSPQSNSVAECKNLTLKEMMNAMLISSGLPQNL 311
>gb|EEE51974.1| hypothetical protein OsJ_33644 [Oryza sativa Japonica Group]
Length = 679
Score = 134 bits (338), Expect(2) = 2e-36
Identities = 57/101 (56%), Positives = 80/101 (79%)
Frame = +3
Query: 129 GEAVLSACYILNRVPFKGSDKTPYELWKGRQPSFAYFKVWGCLAKVHIPKPKSTKIGPKT 308
GEA+L++ ++LNRVP + +KTPYE+W GR+PS +Y + WGCLAKV++P K K+GPKT
Sbjct: 360 GEALLTSNHVLNRVPNRNKNKTPYEIWIGRKPSLSYLRTWGCLAKVNVPITKKRKLGPKT 419
Query: 309 VDCVFIGYPEHTPAYRFMVVSSDISEIGVNTIMDSRDAVCF 431
VDCVF+GY H+ AYRF++V S++ ++ V TIM+SRDA F
Sbjct: 420 VDCVFLGYAHHSIAYRFLIVKSEVPDMHVGTIMESRDATFF 460
Score = 44.3 bits (103), Expect(2) = 2e-36
Identities = 21/43 (48%), Positives = 28/43 (65%)
Frame = +1
Query: 10 PYSPQSYSVVERKNRTLKEMMNVMLISSGLPSNLCVCGWGGKL 138
PYSP+S + ERKNRTL +++N ML ++GLP WG L
Sbjct: 325 PYSPESNGIAERKNRTLTDLVNAMLDTAGLPK----AWWGEAL 363
>gb|ABF96702.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1518
Score = 134 bits (337), Expect(2) = 3e-36
Identities = 57/101 (56%), Positives = 79/101 (78%)
Frame = +3
Query: 129 GEAVLSACYILNRVPFKGSDKTPYELWKGRQPSFAYFKVWGCLAKVHIPKPKSTKIGPKT 308
GEA+L++ ++LNRVP + DKTPYE+W GR+P +Y + WGCLAKV++P K K+GPKT
Sbjct: 836 GEALLTSNHVLNRVPNRNKDKTPYEIWIGRKPLLSYLRTWGCLAKVNVPITKKRKLGPKT 895
Query: 309 VDCVFIGYPEHTPAYRFMVVSSDISEIGVNTIMDSRDAVCF 431
VDCVF+GY H+ AYRF++V S++ ++ V TIM+SRDA F
Sbjct: 896 VDCVFLGYAHHSIAYRFLIVKSEVPDMHVGTIMESRDATFF 936
Score = 44.3 bits (103), Expect(2) = 3e-36
Identities = 21/43 (48%), Positives = 28/43 (65%)
Frame = +1
Query: 10 PYSPQSYSVVERKNRTLKEMMNVMLISSGLPSNLCVCGWGGKL 138
PYSP+S + ERKNRTL +++N ML ++GLP WG L
Sbjct: 801 PYSPESNGIAERKNRTLTDLVNAMLDTAGLPK----AWWGEAL 839
>gb|AAP20858.1| retrotransposon protein, putative, Ty1-copia sub-class [Oryza
sativa Japonica Group]
Length = 1302
Score = 134 bits (337), Expect(2) = 3e-36
Identities = 57/101 (56%), Positives = 79/101 (78%)
Frame = +3
Query: 129 GEAVLSACYILNRVPFKGSDKTPYELWKGRQPSFAYFKVWGCLAKVHIPKPKSTKIGPKT 308
GEA+L++ ++LNRVP + DKTPYE+W GR+P +Y + WGCLAKV++P K K+GPKT
Sbjct: 620 GEALLTSNHVLNRVPNRNKDKTPYEIWIGRKPLLSYLRTWGCLAKVNVPITKKRKLGPKT 679
Query: 309 VDCVFIGYPEHTPAYRFMVVSSDISEIGVNTIMDSRDAVCF 431
VDCVF+GY H+ AYRF++V S++ ++ V TIM+SRDA F
Sbjct: 680 VDCVFLGYAHHSIAYRFLIVKSEVPDMHVGTIMESRDATFF 720
Score = 44.3 bits (103), Expect(2) = 3e-36
Identities = 21/43 (48%), Positives = 28/43 (65%)
Frame = +1
Query: 10 PYSPQSYSVVERKNRTLKEMMNVMLISSGLPSNLCVCGWGGKL 138
PYSP+S + ERKNRTL +++N ML ++GLP WG L
Sbjct: 585 PYSPESNGIAERKNRTLTDLVNAMLDTAGLPK----AWWGEAL 623
>gb|ABA91250.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1320
Score = 134 bits (337), Expect(2) = 4e-36
Identities = 57/100 (57%), Positives = 79/100 (79%)
Frame = +3
Query: 132 EAVLSACYILNRVPFKGSDKTPYELWKGRQPSFAYFKVWGCLAKVHIPKPKSTKIGPKTV 311
EA+L++ ++LNRVP + DKTPYE+W GR+PS +Y + WGCLAKV++P K K+GPKTV
Sbjct: 621 EALLTSNHVLNRVPNRNKDKTPYEIWIGRKPSLSYLRTWGCLAKVNVPITKKRKLGPKTV 680
Query: 312 DCVFIGYPEHTPAYRFMVVSSDISEIGVNTIMDSRDAVCF 431
DCVF+GY H+ AYRF++V S++ ++ V TIM+SRDA F
Sbjct: 681 DCVFLGYAHHSIAYRFLIVKSEVPDMHVGTIMESRDATFF 720
Score = 43.9 bits (102), Expect(2) = 4e-36
Identities = 18/31 (58%), Positives = 25/31 (80%)
Frame = +1
Query: 10 PYSPQSYSVVERKNRTLKEMMNVMLISSGLP 102
PYSP+S + ERKNRTL +++N ML ++GLP
Sbjct: 585 PYSPESNGIAERKNRTLTDLVNAMLDTAGLP 615
>gb|ADN33807.1| ty1-copia retrotransposon protein [Cucumis melo subsp. melo]
Length = 1038
Score = 123 bits (308), Expect(2) = 4e-36
Identities = 58/101 (57%), Positives = 71/101 (70%)
Frame = +3
Query: 129 GEAVLSACYILNRVPFKGSDKTPYELWKGRQPSFAYFKVWGCLAKVHIPKPKSTKIGPKT 308
GEAVLSAC+ILNR+P K DKTPYELWKG P+ +Y KVWGCLAKV +P K T +GPKT
Sbjct: 654 GEAVLSACFILNRIPHKRLDKTPYELWKGHAPNLSYLKVWGCLAKVPLPALKKTTVGPKT 713
Query: 309 VDCVFIGYPEHTPAYRFMVVSSDISEIGVNTIMDSRDAVCF 431
DC+FI Y +++ AYRFM ++ TI +SRD F
Sbjct: 714 FDCIFIEYAQNSAAYRFMCLND-------KTINESRDVEFF 747
Score = 55.1 bits (131), Expect(2) = 4e-36
Identities = 26/41 (63%), Positives = 30/41 (73%)
Frame = +1
Query: 7 SPYSPQSYSVVERKNRTLKEMMNVMLISSGLPSNLCVCGWG 129
+PYSPQ + ERKNRTLKEMMN ML+SSGL N+ WG
Sbjct: 618 APYSPQQNGIAERKNRTLKEMMNAMLLSSGLSDNM----WG 654
>gb|AAV24814.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1289
Score = 133 bits (334), Expect(2) = 7e-36
Identities = 57/101 (56%), Positives = 79/101 (78%)
Frame = +3
Query: 129 GEAVLSACYILNRVPFKGSDKTPYELWKGRQPSFAYFKVWGCLAKVHIPKPKSTKIGPKT 308
GEA+L++ ++LNRVP + DKTPYE+W R+PS +Y + WGCLAKV++P K K+GPKT
Sbjct: 620 GEALLTSNHVLNRVPNRNKDKTPYEIWIDRKPSLSYLRTWGCLAKVNVPITKKRKLGPKT 679
Query: 309 VDCVFIGYPEHTPAYRFMVVSSDISEIGVNTIMDSRDAVCF 431
VDCVF+GY H+ AYRF++V S++ ++ V TIM+SRDA F
Sbjct: 680 VDCVFLGYAYHSIAYRFLIVKSEVPDMHVGTIMESRDATFF 720
Score = 44.3 bits (103), Expect(2) = 7e-36
Identities = 21/43 (48%), Positives = 28/43 (65%)
Frame = +1
Query: 10 PYSPQSYSVVERKNRTLKEMMNVMLISSGLPSNLCVCGWGGKL 138
PYSP+S + ERKNRTL +++N ML ++GLP WG L
Sbjct: 585 PYSPESNGIAERKNRTLTDLVNAMLDTAGLPK----AWWGEAL 623
>gb|AAN64998.1| Putative gag-pol polyprotein [Oryza sativa Japonica Group]
gi|108707933|gb|ABF95728.1| retrotransposon protein,
putative, Ty1-copia subclass [Oryza sativa Japonica
Group]
Length = 1040
Score = 136 bits (342), Expect(2) = 7e-36
Identities = 58/100 (58%), Positives = 79/100 (79%)
Frame = +3
Query: 132 EAVLSACYILNRVPFKGSDKTPYELWKGRQPSFAYFKVWGCLAKVHIPKPKSTKIGPKTV 311
EA+L++ ++LNRVP K DKTPYE+W GR+PS +Y + WGCLAKV++P K K+GPKTV
Sbjct: 574 EALLTSNHVLNRVPNKNKDKTPYEIWTGRKPSLSYLRTWGCLAKVNVPITKKRKLGPKTV 633
Query: 312 DCVFIGYPEHTPAYRFMVVSSDISEIGVNTIMDSRDAVCF 431
DCVF+GY H+ AYRF++V S++ ++ V TIM+SRDA F
Sbjct: 634 DCVFLGYAHHSIAYRFLIVKSEVPDMHVGTIMESRDATFF 673
Score = 41.2 bits (95), Expect(2) = 7e-36
Identities = 17/30 (56%), Positives = 24/30 (80%)
Frame = +1
Query: 13 YSPQSYSVVERKNRTLKEMMNVMLISSGLP 102
YSP+S + ERKNRTL +++N ML ++GLP
Sbjct: 539 YSPESNGIAERKNRTLTDLVNAMLDTAGLP 568
>gb|AAT39267.1| putative polyprotein [Oryza sativa Japonica Group]
gi|50878407|gb|AAT85181.1| putative polyprotein [Oryza
sativa Japonica Group]
Length = 1297
Score = 132 bits (332), Expect(2) = 1e-35
Identities = 56/101 (55%), Positives = 78/101 (77%)
Frame = +3
Query: 129 GEAVLSACYILNRVPFKGSDKTPYELWKGRQPSFAYFKVWGCLAKVHIPKPKSTKIGPKT 308
GEA+L+ ++LNRVP + +KTPYE+W GR+PS +Y + WGCLAKV++P K K+GPKT
Sbjct: 620 GEALLTLNHVLNRVPNRNKNKTPYEIWIGRKPSLSYLRTWGCLAKVNVPITKKRKLGPKT 679
Query: 309 VDCVFIGYPEHTPAYRFMVVSSDISEIGVNTIMDSRDAVCF 431
VDCVF+GY H+ AYRF++V S++ ++ V TIM+SRD F
Sbjct: 680 VDCVFLGYAHHSIAYRFLIVKSEVPDMHVGTIMESRDGTFF 720
Score = 44.3 bits (103), Expect(2) = 1e-35
Identities = 21/43 (48%), Positives = 28/43 (65%)
Frame = +1
Query: 10 PYSPQSYSVVERKNRTLKEMMNVMLISSGLPSNLCVCGWGGKL 138
PYSP+S + ERKNRTL +++N ML ++GLP WG L
Sbjct: 585 PYSPESNGIAERKNRTLTDLVNAMLDTAGLPK----AWWGEAL 623
>gb|AAT38766.2| Polyprotein, putative [Solanum demissum]
Length = 1355
Score = 119 bits (299), Expect(2) = 6e-35
Identities = 57/91 (62%), Positives = 66/91 (72%)
Frame = +3
Query: 129 GEAVLSACYILNRVPFKGSDKTPYELWKGRQPSFAYFKVWGCLAKVHIPKPKSTKIGPKT 308
GE +L+A ILNRVP + PYELWKGR+P+ YFKVWGCLAKV +P PK KIGPK
Sbjct: 664 GETILTANKILNRVPRSKTQSIPYELWKGRKPNLKYFKVWGCLAKVEVPLPKRVKIGPKI 723
Query: 309 VDCVFIGYPEHTPAYRFMVVSSDISEIGVNT 401
VDCVFIGY ++ A RF+V SD EI VNT
Sbjct: 724 VDCVFIGYAVNSKACRFLVHKSDNPEIHVNT 754
Score = 54.7 bits (130), Expect(2) = 6e-35
Identities = 26/41 (63%), Positives = 31/41 (75%)
Frame = +1
Query: 7 SPYSPQSYSVVERKNRTLKEMMNVMLISSGLPSNLCVCGWG 129
+PY+PQS + ERKNRTLKEMMN ++ISSG P NL WG
Sbjct: 628 APYTPQSNGLAERKNRTLKEMMNALIISSGSPRNL----WG 664
>gb|ABA93820.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1166
Score = 130 bits (327), Expect(2) = 1e-34
Identities = 56/101 (55%), Positives = 78/101 (77%)
Frame = +3
Query: 129 GEAVLSACYILNRVPFKGSDKTPYELWKGRQPSFAYFKVWGCLAKVHIPKPKSTKIGPKT 308
GEA+L + ++LNRVP + DKTPYE+W GR+PS +Y + WGCLAKV++P K K+GPKT
Sbjct: 484 GEALLISNHVLNRVPNRNKDKTPYEIWIGRKPSLSYLRTWGCLAKVNVPITKKRKLGPKT 543
Query: 309 VDCVFIGYPEHTPAYRFMVVSSDISEIGVNTIMDSRDAVCF 431
VD VF+GY H+ AYRF++V S++ ++ + TIM+SRDA F
Sbjct: 544 VDRVFLGYAHHSIAYRFLIVKSEVPDMHIGTIMESRDATYF 584
Score = 43.1 bits (100), Expect(2) = 1e-34
Identities = 20/43 (46%), Positives = 28/43 (65%)
Frame = +1
Query: 10 PYSPQSYSVVERKNRTLKEMMNVMLISSGLPSNLCVCGWGGKL 138
PYSP+S + E+KNRTL +++N ML ++GLP WG L
Sbjct: 449 PYSPESNGIAEKKNRTLTDLVNAMLDTAGLPK----AWWGEAL 487
>gb|ABA97555.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 634
Score = 132 bits (332), Expect(2) = 1e-34
Identities = 56/101 (55%), Positives = 78/101 (77%)
Frame = +3
Query: 129 GEAVLSACYILNRVPFKGSDKTPYELWKGRQPSFAYFKVWGCLAKVHIPKPKSTKIGPKT 308
GEA+L++ ++LNRVP + DKTPYE+W GR+P +Y + WGCLAKV++P K K+GPKT
Sbjct: 276 GEALLTSNHVLNRVPNRNKDKTPYEIWIGRKPLLSYLRTWGCLAKVNVPITKKRKLGPKT 335
Query: 309 VDCVFIGYPEHTPAYRFMVVSSDISEIGVNTIMDSRDAVCF 431
VDCVF+GY H+ AYRF++V S++ ++ V TIM+S DA F
Sbjct: 336 VDCVFLGYAHHSIAYRFLIVKSEVPDMHVGTIMESHDATFF 376
Score = 41.2 bits (95), Expect(2) = 1e-34
Identities = 17/30 (56%), Positives = 24/30 (80%)
Frame = +1
Query: 10 PYSPQSYSVVERKNRTLKEMMNVMLISSGL 99
PYSP+S + ERKNRTL +++N ML ++GL
Sbjct: 241 PYSPESNGIAERKNRTLTDLVNAMLDTAGL 270
>gb|AAM22635.1|AF434192_2 Gag and Pol [Zea mays]
Length = 1264
Score = 132 bits (333), Expect(2) = 1e-34
Identities = 56/101 (55%), Positives = 79/101 (78%)
Frame = +3
Query: 129 GEAVLSACYILNRVPFKGSDKTPYELWKGRQPSFAYFKVWGCLAKVHIPKPKSTKIGPKT 308
GEAVL++C++LNR+P +KTPYE W GR+PS +Y + WGC+AKV++P K K+GP+T
Sbjct: 582 GEAVLTSCHVLNRIPMGKEEKTPYEKWVGRKPSLSYLRTWGCMAKVNVPINKKRKLGPRT 641
Query: 309 VDCVFIGYPEHTPAYRFMVVSSDISEIGVNTIMDSRDAVCF 431
VDCVF+GY + AYRF+VV S++ ++ V+TIM+SRDA F
Sbjct: 642 VDCVFLGYASCSIAYRFLVVKSEVPDVYVDTIMESRDATFF 682
Score = 40.4 bits (93), Expect(2) = 1e-34
Identities = 17/30 (56%), Positives = 23/30 (76%)
Frame = +1
Query: 10 PYSPQSYSVVERKNRTLKEMMNVMLISSGL 99
PYSP+S + ERKNRTL +++N ML + GL
Sbjct: 547 PYSPESNGIAERKNRTLTDLVNAMLDTCGL 576
>gb|ABG22485.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1132
Score = 129 bits (325), Expect(2) = 3e-34
Identities = 56/100 (56%), Positives = 77/100 (77%)
Frame = +3
Query: 132 EAVLSACYILNRVPFKGSDKTPYELWKGRQPSFAYFKVWGCLAKVHIPKPKSTKIGPKTV 311
EA+L++ ++LNRVP + DKTPYE+W R+PS +Y + WGCLAKV+IP K K+GPK+V
Sbjct: 531 EALLTSNHVLNRVPNRNKDKTPYEIWIRRKPSLSYLRTWGCLAKVNIPITKKRKLGPKSV 590
Query: 312 DCVFIGYPEHTPAYRFMVVSSDISEIGVNTIMDSRDAVCF 431
DCVF+GY H AYRF++V S++ ++ V TIM+SRDA F
Sbjct: 591 DCVFLGYAHHNIAYRFLIVKSEVPDMHVGTIMESRDATFF 630
Score = 42.4 bits (98), Expect(2) = 3e-34
Identities = 17/31 (54%), Positives = 25/31 (80%)
Frame = +1
Query: 10 PYSPQSYSVVERKNRTLKEMMNVMLISSGLP 102
PYSP+S + +RKNRTL +++N ML ++GLP
Sbjct: 495 PYSPESNGIAKRKNRTLTDLVNAMLDTAGLP 525
>emb|CAN62130.1| hypothetical protein VITISV_019730 [Vitis vinifera]
Length = 438
Score = 112 bits (280), Expect(2) = 4e-34
Identities = 54/115 (46%), Positives = 78/115 (67%)
Frame = +3
Query: 129 GEAVLSACYILNRVPFKGSDKTPYELWKGRQPSFAYFKVWGCLAKVHIPKPKSTKIGPKT 308
GE +LSA +I N +P+K KTPYELWKG P+ AY +VWGCLAKV +PK K+ PKT
Sbjct: 117 GETILSARHIQNTIPYKRIGKTPYELWKGYAPNIAYLRVWGCLAKVLFLEPKKRKLAPKT 176
Query: 309 VDCVFIGYPEHTPAYRFMVVSSDISEIGVNTIMDSRDAVCFLKMLFL*NLTLGTE 473
D +FIGY +++ YRF+V + S + VNTI+++++ V F + +F L+ G +
Sbjct: 177 FDAMFIGYAKNSXTYRFLVTKLENSXVDVNTIIETKN-VDFFENIFPMKLSGGEQ 230
Score = 59.3 bits (142), Expect(2) = 4e-34
Identities = 30/46 (65%), Positives = 34/46 (73%)
Frame = +1
Query: 7 SPYSPQSYSVVERKNRTLKEMMNVMLISSGLPSNLCVCGWGGKLSS 144
SPYSP+S +VERKNRTLKEMMN ML+SSG P NL WG + S
Sbjct: 81 SPYSPESNGIVERKNRTLKEMMNEMLVSSGAPLNL----WGETILS 122