BLASTX nr result
ID: Papaver29_contig00046512
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Papaver29_contig00046512
(664 letters)
Database: ./nr
77,306,371 sequences; 28,104,191,420 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_010653852.1| PREDICTED: pre-mRNA-splicing factor prp12 is... 264 4e-68
ref|XP_010653851.1| PREDICTED: pre-mRNA-splicing factor prp12 is... 264 4e-68
ref|XP_010653850.1| PREDICTED: pre-mRNA-splicing factor prp12 is... 264 4e-68
ref|XP_010653849.1| PREDICTED: pre-mRNA-splicing factor prp12 is... 264 4e-68
emb|CBI29964.3| unnamed protein product [Vitis vinifera] 264 4e-68
emb|CAN78747.1| hypothetical protein VITISV_022228 [Vitis vinifera] 263 7e-68
ref|XP_010257605.1| PREDICTED: splicing factor 3B subunit 3 [Nel... 249 1e-63
ref|XP_012090856.1| PREDICTED: pre-mRNA-splicing factor RSE1 [Ja... 236 9e-60
ref|XP_007029119.1| Cleavage and polyadenylation specificity fac... 233 1e-58
ref|XP_007029118.1| Cleavage and polyadenylation specificity fac... 233 1e-58
ref|XP_007029117.1| Cleavage and polyadenylation specificity fac... 233 1e-58
ref|XP_007029116.1| Cleavage and polyadenylation specificity fac... 233 1e-58
ref|XP_011047104.1| PREDICTED: splicing factor 3B subunit 3 [Pop... 225 2e-56
ref|XP_002308344.2| hypothetical protein POPTR_0006s21160g [Popu... 225 2e-56
ref|XP_006429954.1| hypothetical protein CICLE_v10011020mg [Citr... 224 4e-56
ref|XP_010087550.1| DNA damage-binding protein 1b [Morus notabil... 221 3e-55
gb|KDO70786.1| hypothetical protein CISIN_1g044070mg, partial [C... 221 4e-55
ref|XP_006481687.1| PREDICTED: uncharacterized protein LOC102624... 221 4e-55
ref|XP_006481686.1| PREDICTED: uncharacterized protein LOC102624... 221 4e-55
ref|XP_006481685.1| PREDICTED: uncharacterized protein LOC102624... 221 4e-55
>ref|XP_010653852.1| PREDICTED: pre-mRNA-splicing factor prp12 isoform X4 [Vitis
vinifera]
Length = 1397
Score = 264 bits (674), Expect = 4e-68
Identities = 141/237 (59%), Positives = 174/237 (73%), Gaps = 16/237 (6%)
Frame = -1
Query: 664 VSHFQLSNPGNSRHQLGHKLAVDNHGCFVAVSAFEERLALFSVSMLDDSSIINKNIFYPP 485
V+H QLS+PGN R+QLG LA+D++GCF+A SA+E+RLA+FS+SM DS II+K IFYPP
Sbjct: 130 VTHVQLSSPGNLRNQLGQMLAIDSNGCFIATSAYEDRLAMFSISMATDSDIIDKRIFYPP 189
Query: 484 ESEGDIPSVVQDVHGTNISGTIWSMCFISKDVSQSSKGEHNATLAIVLNRKGAVSNELVL 305
E EGD V + VH T+ISGTIWSMCFISKD++Q S G +N LAI+LNR+GAV ELVL
Sbjct: 190 EIEGD-SGVARSVHRTSISGTIWSMCFISKDLNQPSGG-YNPVLAIILNRRGAVLTELVL 247
Query: 304 LEWDTHENAVHVISQYIEAESLAMNIVEVPYSYGFAVLFRVGDALLMDLSDPHNPRCVHK 125
LEW ENAV VISQY EA +A +IVEVP+SYGFA LFR+GDALLMDL D HNP CV+K
Sbjct: 248 LEWIIIENAVRVISQYAEAGHVAHSIVEVPHSYGFAFLFRIGDALLMDLRDAHNPCCVYK 307
Query: 124 ICLGLLP-------------IEDGVDD---DVAVRALLELGMEMSKGDDPMIIDNEN 2
L +LP + DG +D +VA ALLEL ++KGDDPM +D ++
Sbjct: 308 TSLNILPTSVEQNFAEESCRVHDGDEDGIFNVAASALLELKDYVAKGDDPMNVDGDS 364
>ref|XP_010653851.1| PREDICTED: pre-mRNA-splicing factor prp12 isoform X3 [Vitis
vinifera]
Length = 1404
Score = 264 bits (674), Expect = 4e-68
Identities = 141/237 (59%), Positives = 174/237 (73%), Gaps = 16/237 (6%)
Frame = -1
Query: 664 VSHFQLSNPGNSRHQLGHKLAVDNHGCFVAVSAFEERLALFSVSMLDDSSIINKNIFYPP 485
V+H QLS+PGN R+QLG LA+D++GCF+A SA+E+RLA+FS+SM DS II+K IFYPP
Sbjct: 130 VTHVQLSSPGNLRNQLGQMLAIDSNGCFIATSAYEDRLAMFSISMATDSDIIDKRIFYPP 189
Query: 484 ESEGDIPSVVQDVHGTNISGTIWSMCFISKDVSQSSKGEHNATLAIVLNRKGAVSNELVL 305
E EGD V + VH T+ISGTIWSMCFISKD++Q S G +N LAI+LNR+GAV ELVL
Sbjct: 190 EIEGD-SGVARSVHRTSISGTIWSMCFISKDLNQPSGG-YNPVLAIILNRRGAVLTELVL 247
Query: 304 LEWDTHENAVHVISQYIEAESLAMNIVEVPYSYGFAVLFRVGDALLMDLSDPHNPRCVHK 125
LEW ENAV VISQY EA +A +IVEVP+SYGFA LFR+GDALLMDL D HNP CV+K
Sbjct: 248 LEWIIIENAVRVISQYAEAGHVAHSIVEVPHSYGFAFLFRIGDALLMDLRDAHNPCCVYK 307
Query: 124 ICLGLLP-------------IEDGVDD---DVAVRALLELGMEMSKGDDPMIIDNEN 2
L +LP + DG +D +VA ALLEL ++KGDDPM +D ++
Sbjct: 308 TSLNILPTSVEQNFAEESCRVHDGDEDGIFNVAASALLELKDYVAKGDDPMNVDGDS 364
>ref|XP_010653850.1| PREDICTED: pre-mRNA-splicing factor prp12 isoform X2 [Vitis
vinifera]
Length = 1410
Score = 264 bits (674), Expect = 4e-68
Identities = 141/237 (59%), Positives = 174/237 (73%), Gaps = 16/237 (6%)
Frame = -1
Query: 664 VSHFQLSNPGNSRHQLGHKLAVDNHGCFVAVSAFEERLALFSVSMLDDSSIINKNIFYPP 485
V+H QLS+PGN R+QLG LA+D++GCF+A SA+E+RLA+FS+SM DS II+K IFYPP
Sbjct: 143 VTHVQLSSPGNLRNQLGQMLAIDSNGCFIATSAYEDRLAMFSISMATDSDIIDKRIFYPP 202
Query: 484 ESEGDIPSVVQDVHGTNISGTIWSMCFISKDVSQSSKGEHNATLAIVLNRKGAVSNELVL 305
E EGD V + VH T+ISGTIWSMCFISKD++Q S G +N LAI+LNR+GAV ELVL
Sbjct: 203 EIEGD-SGVARSVHRTSISGTIWSMCFISKDLNQPSGG-YNPVLAIILNRRGAVLTELVL 260
Query: 304 LEWDTHENAVHVISQYIEAESLAMNIVEVPYSYGFAVLFRVGDALLMDLSDPHNPRCVHK 125
LEW ENAV VISQY EA +A +IVEVP+SYGFA LFR+GDALLMDL D HNP CV+K
Sbjct: 261 LEWIIIENAVRVISQYAEAGHVAHSIVEVPHSYGFAFLFRIGDALLMDLRDAHNPCCVYK 320
Query: 124 ICLGLLP-------------IEDGVDD---DVAVRALLELGMEMSKGDDPMIIDNEN 2
L +LP + DG +D +VA ALLEL ++KGDDPM +D ++
Sbjct: 321 TSLNILPTSVEQNFAEESCRVHDGDEDGIFNVAASALLELKDYVAKGDDPMNVDGDS 377
>ref|XP_010653849.1| PREDICTED: pre-mRNA-splicing factor prp12 isoform X1 [Vitis
vinifera]
Length = 1417
Score = 264 bits (674), Expect = 4e-68
Identities = 141/237 (59%), Positives = 174/237 (73%), Gaps = 16/237 (6%)
Frame = -1
Query: 664 VSHFQLSNPGNSRHQLGHKLAVDNHGCFVAVSAFEERLALFSVSMLDDSSIINKNIFYPP 485
V+H QLS+PGN R+QLG LA+D++GCF+A SA+E+RLA+FS+SM DS II+K IFYPP
Sbjct: 143 VTHVQLSSPGNLRNQLGQMLAIDSNGCFIATSAYEDRLAMFSISMATDSDIIDKRIFYPP 202
Query: 484 ESEGDIPSVVQDVHGTNISGTIWSMCFISKDVSQSSKGEHNATLAIVLNRKGAVSNELVL 305
E EGD V + VH T+ISGTIWSMCFISKD++Q S G +N LAI+LNR+GAV ELVL
Sbjct: 203 EIEGD-SGVARSVHRTSISGTIWSMCFISKDLNQPSGG-YNPVLAIILNRRGAVLTELVL 260
Query: 304 LEWDTHENAVHVISQYIEAESLAMNIVEVPYSYGFAVLFRVGDALLMDLSDPHNPRCVHK 125
LEW ENAV VISQY EA +A +IVEVP+SYGFA LFR+GDALLMDL D HNP CV+K
Sbjct: 261 LEWIIIENAVRVISQYAEAGHVAHSIVEVPHSYGFAFLFRIGDALLMDLRDAHNPCCVYK 320
Query: 124 ICLGLLP-------------IEDGVDD---DVAVRALLELGMEMSKGDDPMIIDNEN 2
L +LP + DG +D +VA ALLEL ++KGDDPM +D ++
Sbjct: 321 TSLNILPTSVEQNFAEESCRVHDGDEDGIFNVAASALLELKDYVAKGDDPMNVDGDS 377
>emb|CBI29964.3| unnamed protein product [Vitis vinifera]
Length = 1363
Score = 264 bits (674), Expect = 4e-68
Identities = 141/237 (59%), Positives = 174/237 (73%), Gaps = 16/237 (6%)
Frame = -1
Query: 664 VSHFQLSNPGNSRHQLGHKLAVDNHGCFVAVSAFEERLALFSVSMLDDSSIINKNIFYPP 485
V+H QLS+PGN R+QLG LA+D++GCF+A SA+E+RLA+FS+SM DS II+K IFYPP
Sbjct: 130 VTHVQLSSPGNLRNQLGQMLAIDSNGCFIATSAYEDRLAMFSISMATDSDIIDKRIFYPP 189
Query: 484 ESEGDIPSVVQDVHGTNISGTIWSMCFISKDVSQSSKGEHNATLAIVLNRKGAVSNELVL 305
E EGD V + VH T+ISGTIWSMCFISKD++Q S G +N LAI+LNR+GAV ELVL
Sbjct: 190 EIEGD-SGVARSVHRTSISGTIWSMCFISKDLNQPSGG-YNPVLAIILNRRGAVLTELVL 247
Query: 304 LEWDTHENAVHVISQYIEAESLAMNIVEVPYSYGFAVLFRVGDALLMDLSDPHNPRCVHK 125
LEW ENAV VISQY EA +A +IVEVP+SYGFA LFR+GDALLMDL D HNP CV+K
Sbjct: 248 LEWIIIENAVRVISQYAEAGHVAHSIVEVPHSYGFAFLFRIGDALLMDLRDAHNPCCVYK 307
Query: 124 ICLGLLP-------------IEDGVDD---DVAVRALLELGMEMSKGDDPMIIDNEN 2
L +LP + DG +D +VA ALLEL ++KGDDPM +D ++
Sbjct: 308 TSLNILPTSVEQNFAEESCRVHDGDEDGIFNVAASALLELKDYVAKGDDPMNVDGDS 364
>emb|CAN78747.1| hypothetical protein VITISV_022228 [Vitis vinifera]
Length = 1298
Score = 263 bits (672), Expect = 7e-68
Identities = 141/237 (59%), Positives = 173/237 (72%), Gaps = 16/237 (6%)
Frame = -1
Query: 664 VSHFQLSNPGNSRHQLGHKLAVDNHGCFVAVSAFEERLALFSVSMLDDSSIINKNIFYPP 485
V+H QLS+PGN R+QLG LA+D++GCF+A SA+E+RLA+FS+SM DS II+K IFYPP
Sbjct: 171 VTHVQLSSPGNLRNQLGQMLAIDSNGCFIATSAYEDRLAMFSISMATDSDIIDKRIFYPP 230
Query: 484 ESEGDIPSVVQDVHGTNISGTIWSMCFISKDVSQSSKGEHNATLAIVLNRKGAVSNELVL 305
E EGD V + VH T+ISGTIWSMCFISKD++Q S G +N LAI+LNR+GAV ELVL
Sbjct: 231 EIEGD-SGVARSVHRTSISGTIWSMCFISKDLNQPSGG-YNPVLAIILNRRGAVLTELVL 288
Query: 304 LEWDTHENAVHVISQYIEAESLAMNIVEVPYSYGFAVLFRVGDALLMDLSDPHNPRCVHK 125
LEW ENAV VISQY EA A +IVEVP+SYGFA LFR+GDALLMDL D HNP CV+K
Sbjct: 289 LEWIIIENAVRVISQYAEAGHXAHSIVEVPHSYGFAFLFRIGDALLMDLRDAHNPCCVYK 348
Query: 124 ICLGLLP-------------IEDGVDD---DVAVRALLELGMEMSKGDDPMIIDNEN 2
L +LP + DG +D +VA ALLEL ++KGDDPM +D ++
Sbjct: 349 TSLNILPTSVEQNFAEESCRVHDGDEDGIFNVAASALLELKDYVAKGDDPMNVDGDS 405
>ref|XP_010257605.1| PREDICTED: splicing factor 3B subunit 3 [Nelumbo nucifera]
Length = 1396
Score = 249 bits (635), Expect = 1e-63
Identities = 138/240 (57%), Positives = 169/240 (70%), Gaps = 20/240 (8%)
Frame = -1
Query: 664 VSHFQLSNPGNSRHQLGHKLAVDNHGCFVAVSAFEERLALFSVSMLDDSSIINKNIFYPP 485
V+H QLS+PGN+RHQLG KLAVD++GCF+A SA+E+RLALFSVS+ S+I+NK IFYPP
Sbjct: 129 VTHVQLSHPGNARHQLGRKLAVDSNGCFIAASAYEDRLALFSVSISASSNIVNKKIFYPP 188
Query: 484 ESEGDIPSVVQDVHGTNISGTIWSMCFISKDVSQSSKGEHNATLAIVLNRKGAVSNELVL 305
E EGD + + T+I G IWSMCFISKD SQ S E + LAIVLNRKG++ NEL+L
Sbjct: 189 EHEGDTSKAI-GIQRTSICGVIWSMCFISKDASQVSWNECSPILAIVLNRKGSILNELLL 247
Query: 304 LEWDTHENAVHVISQYIEAESLAMNIVEVPYSYGFAVLFRVGDALLMDLSDPHNPRCVHK 125
L W+T E+ +HVI QY EA A +IVEVP++ GFA LFR GDALLMD +P NP CV++
Sbjct: 248 LGWNTKEHTIHVICQYTEAGPTAFDIVEVPHANGFAFLFRDGDALLMDFRNPVNPCCVYR 307
Query: 124 ICLGLLP--------IED-----GVDDD----VAVRALLEL---GMEMSKGDDPMIIDNE 5
L LLP +E+ VDD+ VA ALLEL +EM KGDDPM IDNE
Sbjct: 308 TTLSLLPTSTEERNSVEEPCRGLDVDDEGIFNVAACALLELRDSRIEMIKGDDPMSIDNE 367
>ref|XP_012090856.1| PREDICTED: pre-mRNA-splicing factor RSE1 [Jatropha curcas]
Length = 1386
Score = 236 bits (602), Expect = 9e-60
Identities = 131/237 (55%), Positives = 168/237 (70%), Gaps = 17/237 (7%)
Frame = -1
Query: 664 VSHFQLSNPGNSRHQLGHKLAVDNHGCFVAVSAFEERLALFSVSMLDDSSIINKNIFYPP 485
++ QLS+PGNSRHQLG LAVD+ GCF+A SA+ ++LALFS+S+ S +I+K IFYPP
Sbjct: 132 LTQVQLSSPGNSRHQLGRMLAVDSSGCFIASSAYVDQLALFSLSVSGGSDLIDKRIFYPP 191
Query: 484 ESEGDIPSVVQDVHGTNISGTIWSMCFISKDVSQSSKGEHNATLAIVLNRKGAVSNELVL 305
E+EG S + +H +ISGTIWSMCFIS+D QSSK EHN LAI+LNR+GA+ NEL+L
Sbjct: 192 ENEGQT-SFTRSIHKPSISGTIWSMCFISRDSCQSSK-EHNPVLAIILNRRGALLNELLL 249
Query: 304 LEWDTHENAVHVISQYIEAESLAMNIVEVPYSYGFAVLFRVGDALLMDLSDPHNPRCVHK 125
LEW+ E+A++VIS Y+EA +A +I+EVP+S GFA LFRVGDALLMDL D HNP C+++
Sbjct: 250 LEWNIGEHAINVISLYVEAGPIAHDIIEVPHSNGFAFLFRVGDALLMDLRDAHNPCCIYR 309
Query: 124 ICLGLLP--------IEDG-----VDDD----VAVRALLELGMEMSKGDDPMIIDNE 5
L LP +E+ VDDD VA ALLEL + DPM ID+E
Sbjct: 310 TSLNFLPTAVEEQNFVEESCRVHDVDDDGLFNVAACALLEL-----RDYDPMCIDSE 361
>ref|XP_007029119.1| Cleavage and polyadenylation specificity factor (CPSF) A subunit
protein isoform 4 [Theobroma cacao]
gi|508717724|gb|EOY09621.1| Cleavage and polyadenylation
specificity factor (CPSF) A subunit protein isoform 4
[Theobroma cacao]
Length = 1127
Score = 233 bits (593), Expect = 1e-58
Identities = 134/238 (56%), Positives = 161/238 (67%), Gaps = 17/238 (7%)
Frame = -1
Query: 664 VSHFQLSNPGNSRHQLGHKLAVDNHGCFVAVSAFEERLALFSVSMLDDSSIINKNIFYPP 485
V+H QLS+PGNSRHQLG LAVD+ GCF+A SA+E+RLALFS+SM II++ IFYPP
Sbjct: 31 VAHVQLSDPGNSRHQLGRMLAVDSTGCFIATSAYEDRLALFSLSMSAGDDIIDERIFYPP 90
Query: 484 ESEGDIPSVVQDVHGTNISGTIWSMCFISKDVSQSSKGEHNATLAIVLNRKGAVSNELVL 305
E+EG + S + T+I GTIWSMCF+SKD Q +K EHN LAIVLNRKG NELVL
Sbjct: 91 ENEGSVSST-RSAQRTSIRGTIWSMCFVSKDSFQPNK-EHNPVLAIVLNRKGNALNELVL 148
Query: 304 LEWDTHENAVHVISQYIEAESLAMNIVEVPYSYGFAVLFRVGDALLMDLSDPHNPRCVHK 125
L W+ E AV+V+SQY+EA LA +IVEVP+S GFA L RVGDALLMDLSD HNP CV++
Sbjct: 149 LGWNIKERAVYVVSQYLEAGPLAHSIVEVPHSCGFAFLLRVGDALLMDLSDAHNPHCVYR 208
Query: 124 ICLGLLP--------IEDG-----VDDD----VAVRALLELGMEMSKGDDPMIIDNEN 2
L IED VDD+ VA ALL+L DPM ID ++
Sbjct: 209 TTLNFSGHTLEEQNFIEDSFRAHDVDDEGLFNVAACALLQL-----SDYDPMCIDGDS 261
>ref|XP_007029118.1| Cleavage and polyadenylation specificity factor (CPSF) A subunit
protein isoform 3 [Theobroma cacao]
gi|508717723|gb|EOY09620.1| Cleavage and polyadenylation
specificity factor (CPSF) A subunit protein isoform 3
[Theobroma cacao]
Length = 1254
Score = 233 bits (593), Expect = 1e-58
Identities = 134/238 (56%), Positives = 161/238 (67%), Gaps = 17/238 (7%)
Frame = -1
Query: 664 VSHFQLSNPGNSRHQLGHKLAVDNHGCFVAVSAFEERLALFSVSMLDDSSIINKNIFYPP 485
V+H QLS+PGNSRHQLG LAVD+ GCF+A SA+E+RLALFS+SM II++ IFYPP
Sbjct: 139 VAHVQLSDPGNSRHQLGRMLAVDSTGCFIATSAYEDRLALFSLSMSAGDDIIDERIFYPP 198
Query: 484 ESEGDIPSVVQDVHGTNISGTIWSMCFISKDVSQSSKGEHNATLAIVLNRKGAVSNELVL 305
E+EG + S + T+I GTIWSMCF+SKD Q +K EHN LAIVLNRKG NELVL
Sbjct: 199 ENEGSVSST-RSAQRTSIRGTIWSMCFVSKDSFQPNK-EHNPVLAIVLNRKGNALNELVL 256
Query: 304 LEWDTHENAVHVISQYIEAESLAMNIVEVPYSYGFAVLFRVGDALLMDLSDPHNPRCVHK 125
L W+ E AV+V+SQY+EA LA +IVEVP+S GFA L RVGDALLMDLSD HNP CV++
Sbjct: 257 LGWNIKERAVYVVSQYLEAGPLAHSIVEVPHSCGFAFLLRVGDALLMDLSDAHNPHCVYR 316
Query: 124 ICLGLLP--------IEDG-----VDDD----VAVRALLELGMEMSKGDDPMIIDNEN 2
L IED VDD+ VA ALL+L DPM ID ++
Sbjct: 317 TTLNFSGHTLEEQNFIEDSFRAHDVDDEGLFNVAACALLQL-----SDYDPMCIDGDS 369
>ref|XP_007029117.1| Cleavage and polyadenylation specificity factor (CPSF) A subunit
protein isoform 2, partial [Theobroma cacao]
gi|508717722|gb|EOY09619.1| Cleavage and polyadenylation
specificity factor (CPSF) A subunit protein isoform 2,
partial [Theobroma cacao]
Length = 1237
Score = 233 bits (593), Expect = 1e-58
Identities = 134/238 (56%), Positives = 161/238 (67%), Gaps = 17/238 (7%)
Frame = -1
Query: 664 VSHFQLSNPGNSRHQLGHKLAVDNHGCFVAVSAFEERLALFSVSMLDDSSIINKNIFYPP 485
V+H QLS+PGNSRHQLG LAVD+ GCF+A SA+E+RLALFS+SM II++ IFYPP
Sbjct: 51 VAHVQLSDPGNSRHQLGRMLAVDSTGCFIATSAYEDRLALFSLSMSAGDDIIDERIFYPP 110
Query: 484 ESEGDIPSVVQDVHGTNISGTIWSMCFISKDVSQSSKGEHNATLAIVLNRKGAVSNELVL 305
E+EG + S + T+I GTIWSMCF+SKD Q +K EHN LAIVLNRKG NELVL
Sbjct: 111 ENEGSVSST-RSAQRTSIRGTIWSMCFVSKDSFQPNK-EHNPVLAIVLNRKGNALNELVL 168
Query: 304 LEWDTHENAVHVISQYIEAESLAMNIVEVPYSYGFAVLFRVGDALLMDLSDPHNPRCVHK 125
L W+ E AV+V+SQY+EA LA +IVEVP+S GFA L RVGDALLMDLSD HNP CV++
Sbjct: 169 LGWNIKERAVYVVSQYLEAGPLAHSIVEVPHSCGFAFLLRVGDALLMDLSDAHNPHCVYR 228
Query: 124 ICLGLLP--------IEDG-----VDDD----VAVRALLELGMEMSKGDDPMIIDNEN 2
L IED VDD+ VA ALL+L DPM ID ++
Sbjct: 229 TTLNFSGHTLEEQNFIEDSFRAHDVDDEGLFNVAACALLQL-----SDYDPMCIDGDS 281
>ref|XP_007029116.1| Cleavage and polyadenylation specificity factor (CPSF) A subunit
protein isoform 1 [Theobroma cacao]
gi|508717721|gb|EOY09618.1| Cleavage and polyadenylation
specificity factor (CPSF) A subunit protein isoform 1
[Theobroma cacao]
Length = 1391
Score = 233 bits (593), Expect = 1e-58
Identities = 134/238 (56%), Positives = 161/238 (67%), Gaps = 17/238 (7%)
Frame = -1
Query: 664 VSHFQLSNPGNSRHQLGHKLAVDNHGCFVAVSAFEERLALFSVSMLDDSSIINKNIFYPP 485
V+H QLS+PGNSRHQLG LAVD+ GCF+A SA+E+RLALFS+SM II++ IFYPP
Sbjct: 139 VAHVQLSDPGNSRHQLGRMLAVDSTGCFIATSAYEDRLALFSLSMSAGDDIIDERIFYPP 198
Query: 484 ESEGDIPSVVQDVHGTNISGTIWSMCFISKDVSQSSKGEHNATLAIVLNRKGAVSNELVL 305
E+EG + S + T+I GTIWSMCF+SKD Q +K EHN LAIVLNRKG NELVL
Sbjct: 199 ENEGSVSST-RSAQRTSIRGTIWSMCFVSKDSFQPNK-EHNPVLAIVLNRKGNALNELVL 256
Query: 304 LEWDTHENAVHVISQYIEAESLAMNIVEVPYSYGFAVLFRVGDALLMDLSDPHNPRCVHK 125
L W+ E AV+V+SQY+EA LA +IVEVP+S GFA L RVGDALLMDLSD HNP CV++
Sbjct: 257 LGWNIKERAVYVVSQYLEAGPLAHSIVEVPHSCGFAFLLRVGDALLMDLSDAHNPHCVYR 316
Query: 124 ICLGLLP--------IEDG-----VDDD----VAVRALLELGMEMSKGDDPMIIDNEN 2
L IED VDD+ VA ALL+L DPM ID ++
Sbjct: 317 TTLNFSGHTLEEQNFIEDSFRAHDVDDEGLFNVAACALLQL-----SDYDPMCIDGDS 369
>ref|XP_011047104.1| PREDICTED: splicing factor 3B subunit 3 [Populus euphratica]
Length = 1397
Score = 225 bits (573), Expect = 2e-56
Identities = 128/236 (54%), Positives = 160/236 (67%), Gaps = 16/236 (6%)
Frame = -1
Query: 664 VSHFQLSNPGNSRHQLGHKLAVDNHGCFVAVSAFEERLALFSVSMLDDSSIINKNIFYPP 485
++H QLSNPGNSRHQLG LAVD+ GCFVA SA+E++LALFS+S S II++ I YPP
Sbjct: 140 LTHIQLSNPGNSRHQLGRMLAVDSSGCFVATSAYEDQLALFSLSASGGSEIIDERILYPP 199
Query: 484 ESEGDIPSVVQDVHGTNISGTIWSMCFISKDVSQSSKGEHNATLAIVLNRKGAVSNELVL 305
E+EG+ +V + + SGTIWSMCFIS+D S SK EHN LAI+LNR+GA+ NEL+L
Sbjct: 200 ENEGNA-NVARSIQRPLTSGTIWSMCFISRDSSHPSK-EHNPVLAIILNRRGALLNELLL 257
Query: 304 LEWDTHENAVHVISQYIEAESLAMNIVEVPYSYGFAVLFRVGDALLMDLSDPHNPRCVHK 125
L WD ++A+ ISQ++E+ LA +IVEVP S GFA++FRVGD LLMDL D +PRCV +
Sbjct: 258 LRWDIRDHAISYISQFVESGPLAHDIVEVPRSNGFALMFRVGDVLLMDLRDALHPRCVCR 317
Query: 124 ICLGLLP--------IEDG----VDDD----VAVRALLELGMEMSKGDDPMIIDNE 5
L P +ED DDD VA RALLEL + DPM ID E
Sbjct: 318 TSLNYFPLAVEEQNFVEDSRVTDFDDDGSFNVAARALLEL-----QDYDPMCIDGE 368
>ref|XP_002308344.2| hypothetical protein POPTR_0006s21160g [Populus trichocarpa]
gi|550336774|gb|EEE91867.2| hypothetical protein
POPTR_0006s21160g [Populus trichocarpa]
Length = 1397
Score = 225 bits (573), Expect = 2e-56
Identities = 127/236 (53%), Positives = 161/236 (68%), Gaps = 16/236 (6%)
Frame = -1
Query: 664 VSHFQLSNPGNSRHQLGHKLAVDNHGCFVAVSAFEERLALFSVSMLDDSSIINKNIFYPP 485
++H QLSNPGNSRHQLG LAVD+ GCFVA SA+E++LALFS+S S II++ I YPP
Sbjct: 140 LTHIQLSNPGNSRHQLGRMLAVDSSGCFVATSAYEDQLALFSLSASGGSEIIDERILYPP 199
Query: 484 ESEGDIPSVVQDVHGTNISGTIWSMCFISKDVSQSSKGEHNATLAIVLNRKGAVSNELVL 305
E+EG+ +V + + SGTIWSMCFIS+D S SK EHN LAI+LNR+GA+ NEL+L
Sbjct: 200 ENEGNA-NVARSIQRPLTSGTIWSMCFISRDSSHPSK-EHNPVLAIILNRRGALLNELLL 257
Query: 304 LEWDTHENAVHVISQYIEAESLAMNIVEVPYSYGFAVLFRVGDALLMDLSDPHNPRCVHK 125
L WD ++A+ ISQ++E+ LA +IVEVP+S GFA++FRVGD LLMDL D +PRCV +
Sbjct: 258 LRWDIRDHAISYISQFVESGPLAHDIVEVPHSNGFALMFRVGDVLLMDLRDALHPRCVCR 317
Query: 124 ICLGLLP--------IEDG----VDDD----VAVRALLELGMEMSKGDDPMIIDNE 5
L P +ED D+D VA RALLEL + DPM ID E
Sbjct: 318 TSLNYFPNAVEEQNFVEDSRVTDFDEDGSFNVAARALLEL-----QDYDPMCIDGE 368
>ref|XP_006429954.1| hypothetical protein CICLE_v10011020mg [Citrus clementina]
gi|557532011|gb|ESR43194.1| hypothetical protein
CICLE_v10011020mg [Citrus clementina]
Length = 926
Score = 224 bits (571), Expect = 4e-56
Identities = 129/238 (54%), Positives = 160/238 (67%), Gaps = 17/238 (7%)
Frame = -1
Query: 664 VSHFQLSNPGNSRHQLGHKLAVDNHGCFVAVSAFEERLALFSVSMLDDSSIINKNIFYPP 485
V+ LSNPGNSRHQLG LAVD+ GCF+AVSA+E+RL LFS+SM S II+K I YP
Sbjct: 139 VAQVHLSNPGNSRHQLGRMLAVDSSGCFIAVSAYEDRLGLFSLSMSSGSDIIDKKICYPS 198
Query: 484 ESEGDIPSVVQDVHGTNISGTIWSMCFISKDVSQSSKGEHNATLAIVLNRKGAVSNELVL 305
ESE D S + ISGTIWSMCFIS D Q SK EHN LAI+LNR+GA+ NEL+L
Sbjct: 199 ESEVDT-SASRIAQKNRISGTIWSMCFISTDPRQPSK-EHNPILAIILNRRGALLNELLL 256
Query: 304 LEWDTHENAVHVISQYIEAESLAMNIVEVPYSYGFAVLFRVGDALLMDLSDPHNPRCVHK 125
+ W+ E+A+ V+S + EA LA ++VEVP SYGFA +FR+GDALLMDL DPHNP CV++
Sbjct: 257 VGWNIREHAISVLSCFFEAGPLAHSVVEVPRSYGFAFVFRIGDALLMDLRDPHNPSCVYR 316
Query: 124 ICLGLLP--IED-----------GVDDD----VAVRALLELGMEMSKGDDPMIIDNEN 2
L LP +E+ VDD+ VA ALLEL + DPM ID+++
Sbjct: 317 TSLNFLPPALEEQNFVDESCRVHDVDDEGLFNVAACALLEL-----RDYDPMCIDSDS 369
>ref|XP_010087550.1| DNA damage-binding protein 1b [Morus notabilis]
gi|587838627|gb|EXB29323.1| DNA damage-binding protein
1b [Morus notabilis]
Length = 1388
Score = 221 bits (563), Expect = 3e-55
Identities = 126/239 (52%), Positives = 162/239 (67%), Gaps = 18/239 (7%)
Frame = -1
Query: 664 VSHFQLSNPGNSRHQLGHKLAVDNHGCFVAVSAFEERLALFSVSMLDDSSIINKNIFYPP 485
V+ QLSNPGNSR QLG LAVD+ G F+A SA+E +LA+FSVS+ S II+K I YPP
Sbjct: 134 VTQVQLSNPGNSRDQLGRLLAVDSSGSFIAASAYENQLAMFSVSVSAGSDIIDKRIVYPP 193
Query: 484 ESEGDIPSVVQDVHGTNISGTIWSMCFISKDVSQSSKGEHNATLAIVLNRKGAVSNELVL 305
E+EGD+ S+ + V +I+GTIW MCFISKD SQ SKG +N LAI+LNR+ + NEL+L
Sbjct: 194 ENEGDL-SITRSVQKNSINGTIWGMCFISKDPSQPSKG-NNPVLAILLNRRSHL-NELLL 250
Query: 304 LEWDTHENAVHVISQYIEAESLAMNIVEVPYSYGFAVLFRVGDALLMDLSDPHNPRCVHK 125
L W+ ++++ V+SQY+E LA +IVEVP+SYGFA++FRVGDA LMDL D HNPRCV++
Sbjct: 251 LGWNIRDHSISVLSQYVEDGPLAYDIVEVPHSYGFAIMFRVGDAFLMDLRDAHNPRCVYR 310
Query: 124 ICLGLLP--------------IEDGVDDD----VAVRALLELGMEMSKGDDPMIIDNEN 2
L LP E VDD+ VA ALLEL + DPM ID ++
Sbjct: 311 TNLNFLPHAVDEQNFVEESCKTEHEVDDEGLFNVAACALLEL-----RDYDPMCIDGDS 364
>gb|KDO70786.1| hypothetical protein CISIN_1g044070mg, partial [Citrus sinensis]
Length = 903
Score = 221 bits (562), Expect = 4e-55
Identities = 128/238 (53%), Positives = 159/238 (66%), Gaps = 17/238 (7%)
Frame = -1
Query: 664 VSHFQLSNPGNSRHQLGHKLAVDNHGCFVAVSAFEERLALFSVSMLDDSSIINKNIFYPP 485
V+ LSNPGNSRHQLG LAVD+ GC +AVSA+E+RL LFS+SM S II+K I YP
Sbjct: 139 VAQVHLSNPGNSRHQLGRMLAVDSSGCLIAVSAYEDRLGLFSLSMSSGSDIIDKKICYPS 198
Query: 484 ESEGDIPSVVQDVHGTNISGTIWSMCFISKDVSQSSKGEHNATLAIVLNRKGAVSNELVL 305
ESE D S + +ISGTIWSMCFIS D Q SK EHN LAI+LNR+GA+ NEL+L
Sbjct: 199 ESEVDT-SASRIAQKNSISGTIWSMCFISTDPRQPSK-EHNPILAIILNRRGALLNELLL 256
Query: 304 LEWDTHENAVHVISQYIEAESLAMNIVEVPYSYGFAVLFRVGDALLMDLSDPHNPRCVHK 125
+ W+ E+A+ V+S + EA LA +VEVP SYGFA +FR+GDALLMDL DPHNP CV++
Sbjct: 257 VGWNIREHAISVLSCFFEAGPLAHCVVEVPRSYGFAFVFRIGDALLMDLRDPHNPSCVYR 316
Query: 124 ICLGLLP--IED-----------GVDDD----VAVRALLELGMEMSKGDDPMIIDNEN 2
L LP +E+ VDD+ VA ALLEL + DPM ID+++
Sbjct: 317 TSLNFLPPALEEQNFVDESCRVHDVDDEGLFNVAACALLEL-----RDYDPMCIDSDS 369
>ref|XP_006481687.1| PREDICTED: uncharacterized protein LOC102624787 isoform X3 [Citrus
sinensis]
Length = 1182
Score = 221 bits (562), Expect = 4e-55
Identities = 128/238 (53%), Positives = 159/238 (66%), Gaps = 17/238 (7%)
Frame = -1
Query: 664 VSHFQLSNPGNSRHQLGHKLAVDNHGCFVAVSAFEERLALFSVSMLDDSSIINKNIFYPP 485
V+ LSNPGNSRHQLG LAVD+ GC +AVSA+E+RL LFS+SM S II+K I YP
Sbjct: 139 VAQVHLSNPGNSRHQLGRMLAVDSSGCLIAVSAYEDRLGLFSLSMSSGSDIIDKKICYPS 198
Query: 484 ESEGDIPSVVQDVHGTNISGTIWSMCFISKDVSQSSKGEHNATLAIVLNRKGAVSNELVL 305
ESE D S + +ISGTIWSMCFIS D Q SK EHN LAI+LNR+GA+ NEL+L
Sbjct: 199 ESEVDT-SASRIAQKNSISGTIWSMCFISTDPRQPSK-EHNPILAIILNRRGALLNELLL 256
Query: 304 LEWDTHENAVHVISQYIEAESLAMNIVEVPYSYGFAVLFRVGDALLMDLSDPHNPRCVHK 125
+ W+ E+A+ V+S + EA LA +VEVP SYGFA +FR+GDALLMDL DPHNP CV++
Sbjct: 257 VGWNIREHAISVLSCFFEAGPLAHCVVEVPRSYGFAFVFRIGDALLMDLRDPHNPSCVYR 316
Query: 124 ICLGLLP--IED-----------GVDDD----VAVRALLELGMEMSKGDDPMIIDNEN 2
L LP +E+ VDD+ VA ALLEL + DPM ID+++
Sbjct: 317 TSLNFLPPALEEQNFVDESCRVHDVDDEGLFNVAACALLEL-----RDYDPMCIDSDS 369
>ref|XP_006481686.1| PREDICTED: uncharacterized protein LOC102624787 isoform X2 [Citrus
sinensis]
Length = 1265
Score = 221 bits (562), Expect = 4e-55
Identities = 128/238 (53%), Positives = 159/238 (66%), Gaps = 17/238 (7%)
Frame = -1
Query: 664 VSHFQLSNPGNSRHQLGHKLAVDNHGCFVAVSAFEERLALFSVSMLDDSSIINKNIFYPP 485
V+ LSNPGNSRHQLG LAVD+ GC +AVSA+E+RL LFS+SM S II+K I YP
Sbjct: 10 VAQVHLSNPGNSRHQLGRMLAVDSSGCLIAVSAYEDRLGLFSLSMSSGSDIIDKKICYPS 69
Query: 484 ESEGDIPSVVQDVHGTNISGTIWSMCFISKDVSQSSKGEHNATLAIVLNRKGAVSNELVL 305
ESE D S + +ISGTIWSMCFIS D Q SK EHN LAI+LNR+GA+ NEL+L
Sbjct: 70 ESEVDT-SASRIAQKNSISGTIWSMCFISTDPRQPSK-EHNPILAIILNRRGALLNELLL 127
Query: 304 LEWDTHENAVHVISQYIEAESLAMNIVEVPYSYGFAVLFRVGDALLMDLSDPHNPRCVHK 125
+ W+ E+A+ V+S + EA LA +VEVP SYGFA +FR+GDALLMDL DPHNP CV++
Sbjct: 128 VGWNIREHAISVLSCFFEAGPLAHCVVEVPRSYGFAFVFRIGDALLMDLRDPHNPSCVYR 187
Query: 124 ICLGLLP--IED-----------GVDDD----VAVRALLELGMEMSKGDDPMIIDNEN 2
L LP +E+ VDD+ VA ALLEL + DPM ID+++
Sbjct: 188 TSLNFLPPALEEQNFVDESCRVHDVDDEGLFNVAACALLEL-----RDYDPMCIDSDS 240
>ref|XP_006481685.1| PREDICTED: uncharacterized protein LOC102624787 isoform X1 [Citrus
sinensis]
Length = 1394
Score = 221 bits (562), Expect = 4e-55
Identities = 128/238 (53%), Positives = 159/238 (66%), Gaps = 17/238 (7%)
Frame = -1
Query: 664 VSHFQLSNPGNSRHQLGHKLAVDNHGCFVAVSAFEERLALFSVSMLDDSSIINKNIFYPP 485
V+ LSNPGNSRHQLG LAVD+ GC +AVSA+E+RL LFS+SM S II+K I YP
Sbjct: 139 VAQVHLSNPGNSRHQLGRMLAVDSSGCLIAVSAYEDRLGLFSLSMSSGSDIIDKKICYPS 198
Query: 484 ESEGDIPSVVQDVHGTNISGTIWSMCFISKDVSQSSKGEHNATLAIVLNRKGAVSNELVL 305
ESE D S + +ISGTIWSMCFIS D Q SK EHN LAI+LNR+GA+ NEL+L
Sbjct: 199 ESEVDT-SASRIAQKNSISGTIWSMCFISTDPRQPSK-EHNPILAIILNRRGALLNELLL 256
Query: 304 LEWDTHENAVHVISQYIEAESLAMNIVEVPYSYGFAVLFRVGDALLMDLSDPHNPRCVHK 125
+ W+ E+A+ V+S + EA LA +VEVP SYGFA +FR+GDALLMDL DPHNP CV++
Sbjct: 257 VGWNIREHAISVLSCFFEAGPLAHCVVEVPRSYGFAFVFRIGDALLMDLRDPHNPSCVYR 316
Query: 124 ICLGLLP--IED-----------GVDDD----VAVRALLELGMEMSKGDDPMIIDNEN 2
L LP +E+ VDD+ VA ALLEL + DPM ID+++
Sbjct: 317 TSLNFLPPALEEQNFVDESCRVHDVDDEGLFNVAACALLEL-----RDYDPMCIDSDS 369