BLASTX nr result

ID: Papaver29_contig00046486 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver29_contig00046486
         (878 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EMC79384.1| hypothetical protein A306_13219, partial [Columba...    59   4e-06

>gb|EMC79384.1| hypothetical protein A306_13219, partial [Columba livia]
          Length = 434

 Score = 59.3 bits (142), Expect = 4e-06
 Identities = 48/202 (23%), Positives = 88/202 (43%), Gaps = 11/202 (5%)
 Frame = -3

Query: 744 HTHSQIY---YFMRSILVHQYIHPCETFLKPILHSNKQIYFSIKNTMVHQCVHLC-KTCI 577
           HTH+ IY   Y    I  H Y H   T++   +H    +Y  I +T +H  +++C  TC+
Sbjct: 142 HTHTHIYMHIYMCIYIYTHTYTH---TYIYAYIH----VYIYI-HTHIHTHIYICIYTCV 193

Query: 576 KLIIYIHTRTHFFMGIIQVQQCVHPCKTFRKMIIHNHTNLLLHGNDRGAPICTPLQNMHK 397
            +  + HT TH +M I           T   +  + H  + +H +            ++ 
Sbjct: 194 YIYTHTHTHTHIYMHIYMCIYIYTHTYTHTYIYAYIHVYIYIHTHIHTHIYICIYTCVYI 253

Query: 396 DDHS*PHTNLFFHVNYFPRVHQYVHRCKTRETYFFIR-----FTQVHQYVHPC-KTCTTP 235
             H+  HT+++ H+  +  ++ Y H       Y +I       T +H +++ C  TC   
Sbjct: 254 YTHTHTHTHIYMHI--YMCIYIYTHTYTHTYIYAYIHVYIYIHTHIHTHIYICIYTCVYI 311

Query: 234 IIHIN-NQQVYIHINYLLVYNY 172
             H + +  +Y+HI Y+ +Y Y
Sbjct: 312 YTHTHTHTHIYMHI-YMCIYIY 332


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