BLASTX nr result

ID: Papaver29_contig00044946 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver29_contig00044946
         (850 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004239427.1| PREDICTED: F-box protein At3g07870-like [Sol...    60   2e-06

>ref|XP_004239427.1| PREDICTED: F-box protein At3g07870-like [Solanum lycopersicum]
          Length = 327

 Score = 60.5 bits (145), Expect = 2e-06
 Identities = 61/211 (28%), Positives = 97/211 (45%), Gaps = 10/211 (4%)
 Frame = -2

Query: 846 YVSSTNEYKVLRTYKLALEESAVVQVEVYTLGSGKGWRHIGRHGNCSEYYAVTYG-VFSN 670
           +  ++ +YKVLR     L +  V  +EVYTLG G+ WR++G+   C   Y   +G V  N
Sbjct: 110 FSKASGKYKVLRLVVGKLTK--VSGLEVYTLGIGEKWRNVGKI-PCPACY--KFGKVNIN 164

Query: 669 ECIYWI--LHTWIITAFNLTDEIFDELSTCSLPGMPGWDPRLGLLGDFLIATNKNKTETA 496
             ++W+      II +F++  E    L        P W+ +L  LG++L  T+   T   
Sbjct: 165 GALHWMDSEKNDIIYSFDIETEKIKSLPAPLGLVNPPWNLKLVELGNYLCLTDYYNT--- 221

Query: 495 SI*LWKKKE---DEAWXXXXXXXXXXXXXXSIL----VSLTSSGEVLCYSDTKVTRYDPK 337
           +I +W+ KE    E+W                     + +   GE+L  S TK+  YDPK
Sbjct: 222 NIDIWRMKEYGISESWTKDIILVDSIPRSMVHFNFEPILMWKDGEILIQSGTKLALYDPK 281

Query: 336 SPSSKMMLVDFGKDIRQAKPYVNTLVSLKAL 244
             S +  LV F  ++  A  Y+ +  SLK +
Sbjct: 282 MKSFR--LVYFHSEVITAVTYIPSFYSLKTV 310


Top