BLASTX nr result

ID: Papaver29_contig00042033 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver29_contig00042033
         (663 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004239427.1| PREDICTED: F-box protein At3g07870-like [Sol...    57   1e-05

>ref|XP_004239427.1| PREDICTED: F-box protein At3g07870-like [Solanum lycopersicum]
          Length = 327

 Score = 57.0 bits (136), Expect = 1e-05
 Identities = 55/208 (26%), Positives = 93/208 (44%), Gaps = 21/208 (10%)
 Frame = +3

Query: 48  VEVYTLGSGKGWRNIGK-------KFNKELQMFIGNHGVLLNGSLYWVLQDGK--IAVFD 200
           +EVYTLG G+ WRN+GK       KF K          V +NG+L+W+  +    I  FD
Sbjct: 133 LEVYTLGIGEKWRNVGKIPCPACYKFGK----------VNINGALHWMDSEKNDIIYSFD 182

Query: 201 LASETFSELPEGF---PKSWNMRLWVLGDYLAATHRDKLSKTFEIFLLXXXXXXXXXXXX 371
           + +E    LP         WN++L  LG+YL  T  D  +   +I+ +            
Sbjct: 183 IETEKIKSLPAPLGLVNPPWNLKLVELGNYLCLT--DYYNTNIDIWRMKEY--------- 231

Query: 372 XXXDGPSLTWIKEFSLNNVDT---------YDYLVLTGRGTVLCRSKTQVQMYDLNSSSS 524
               G S +W K+  L  VD+         ++ +++   G +L +S T++ +YD    S 
Sbjct: 232 ----GISESWTKDIIL--VDSIPRSMVHFNFEPILMWKDGEILIQSGTKLALYDPKMKSF 285

Query: 525 KLLVDFGRDKGIFEAIPHMHTLVSLKAL 608
           +L+        +  A+ ++ +  SLK +
Sbjct: 286 RLVYFHSE---VITAVTYIPSFYSLKTV 310