BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver29_contig00041873
         (1053 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_010656269.1| PREDICTED: probable RNA-dependent RNA polyme...   266   3e-68
ref|XP_010656270.1| PREDICTED: probable RNA-dependent RNA polyme...   266   3e-68
ref|XP_010249519.1| PREDICTED: probable RNA-dependent RNA polyme...   256   2e-65
ref|XP_010249518.1| PREDICTED: probable RNA-dependent RNA polyme...   256   2e-65
ref|XP_008791538.1| PREDICTED: probable RNA-dependent RNA polyme...   245   5e-62
ref|XP_008791522.1| PREDICTED: probable RNA-dependent RNA polyme...   245   5e-62
ref|XP_010916733.1| PREDICTED: probable RNA-dependent RNA polyme...   243   1e-61
ref|XP_009385773.1| PREDICTED: probable RNA-dependent RNA polyme...   242   3e-61
ref|XP_009385772.1| PREDICTED: probable RNA-dependent RNA polyme...   242   3e-61
ref|XP_009385771.1| PREDICTED: probable RNA-dependent RNA polyme...   242   3e-61
ref|XP_006451272.1| hypothetical protein CICLE_v10007331mg [Citr...   235   4e-59
gb|KDO66531.1| hypothetical protein CISIN_1g001771mg [Citrus sin...   234   7e-59
ref|XP_006451271.1| hypothetical protein CICLE_v10007331mg [Citr...   234   7e-59
ref|XP_006380469.1| hypothetical protein POPTR_0007s06560g [Popu...   233   2e-58
ref|XP_006380470.1| hypothetical protein POPTR_0007s06560g [Popu...   233   3e-58
ref|XP_011025605.1| PREDICTED: probable RNA-dependent RNA polyme...   231   7e-58
ref|XP_006381765.1| hypothetical protein POPTR_0006s17780g [Popu...   230   1e-57
ref|XP_013596637.1| PREDICTED: probable RNA-dependent RNA polyme...   230   2e-57
ref|XP_013596639.1| PREDICTED: probable RNA-dependent RNA polyme...   229   3e-57
ref|XP_013596635.1| PREDICTED: probable RNA-dependent RNA polyme...   227   1e-56

>ref|XP_010656269.1| PREDICTED: probable RNA-dependent RNA polymerase 5 isoform X1
           [Vitis vinifera]
          Length = 954

 Score =  266 bits (679), Expect = 3e-68
 Identities = 143/275 (52%), Positives = 191/275 (69%), Gaps = 5/275 (1%)
 Frame = -1

Query: 813 PSNQMINSEYSSTGKMKRLTCNDPHLLALGELEFKKMFLILSCCGKEYKLEDFISVDEIR 634
           P+ + + S  SST K  R   + P L+ALGELEF+K FLILS  G + + ED +S +EI 
Sbjct: 77  PTPKHLISSPSSTPKKARRQASSPQLVALGELEFRKAFLILSYIGDK-RPEDLLSAEEIL 135

Query: 633 RMKSLHMGHFETRLRTILGDDQYVKQTDRTKKLDWDSEKTFVYHCYVEPDGSYTFKGPYL 454
           ++K+L MG FET +   LG  +++K+ DR +  DWDS+KT +YHC+V PDGSY FKGPYL
Sbjct: 136 KLKNLPMGVFETEVWNNLGR-KFIKEEDRQRSFDWDSDKTHIYHCHVSPDGSYRFKGPYL 194

Query: 453 QRDATHLHRVLGDDNVLLVKFSGNEGDR---DCS--SSPVYHRIRKEGILVGLRRFQFFV 289
            +  THL RVLGD+N+LLVKF+ +  DR   +CS  S+  Y++I +EGI VGLR+++FFV
Sbjct: 195 NKTRTHLQRVLGDENILLVKFAEDVTDRSSLNCSTDSNASYNKIAREGIFVGLRQYRFFV 254

Query: 288 FKDGGKEXXXXXXXXXSFASSVKCYFVCLESSGLHDKSVSEARSHFMHIHNISSMPKYMP 109
           FKDGGKE            SSVKCYFV +ESS L  K+V EAR  FMH H +SS+ KYM 
Sbjct: 255 FKDGGKEEKKKNP-----TSSVKCYFVFMESSALSGKTVHEARCIFMHAHMVSSVAKYMA 309

Query: 108 RLSLILSKTTKIQLDFASVNIEIIKDQPCLDQNGN 4
           R SLILSKT K+ +D ++VNI+ I D+P  D++G+
Sbjct: 310 RFSLILSKTVKLDVDLSTVNIQRIDDEPGRDEDGH 344


>ref|XP_010656270.1| PREDICTED: probable RNA-dependent RNA polymerase 5 isoform X2
           [Vitis vinifera] gi|297738765|emb|CBI28010.3| unnamed
           protein product [Vitis vinifera]
          Length = 929

 Score =  266 bits (679), Expect = 3e-68
 Identities = 143/275 (52%), Positives = 191/275 (69%), Gaps = 5/275 (1%)
 Frame = -1

Query: 813 PSNQMINSEYSSTGKMKRLTCNDPHLLALGELEFKKMFLILSCCGKEYKLEDFISVDEIR 634
           P+ + + S  SST K  R   + P L+ALGELEF+K FLILS  G + + ED +S +EI 
Sbjct: 77  PTPKHLISSPSSTPKKARRQASSPQLVALGELEFRKAFLILSYIGDK-RPEDLLSAEEIL 135

Query: 633 RMKSLHMGHFETRLRTILGDDQYVKQTDRTKKLDWDSEKTFVYHCYVEPDGSYTFKGPYL 454
           ++K+L MG FET +   LG  +++K+ DR +  DWDS+KT +YHC+V PDGSY FKGPYL
Sbjct: 136 KLKNLPMGVFETEVWNNLGR-KFIKEEDRQRSFDWDSDKTHIYHCHVSPDGSYRFKGPYL 194

Query: 453 QRDATHLHRVLGDDNVLLVKFSGNEGDR---DCS--SSPVYHRIRKEGILVGLRRFQFFV 289
            +  THL RVLGD+N+LLVKF+ +  DR   +CS  S+  Y++I +EGI VGLR+++FFV
Sbjct: 195 NKTRTHLQRVLGDENILLVKFAEDVTDRSSLNCSTDSNASYNKIAREGIFVGLRQYRFFV 254

Query: 288 FKDGGKEXXXXXXXXXSFASSVKCYFVCLESSGLHDKSVSEARSHFMHIHNISSMPKYMP 109
           FKDGGKE            SSVKCYFV +ESS L  K+V EAR  FMH H +SS+ KYM 
Sbjct: 255 FKDGGKEEKKKNP-----TSSVKCYFVFMESSALSGKTVHEARCIFMHAHMVSSVAKYMA 309

Query: 108 RLSLILSKTTKIQLDFASVNIEIIKDQPCLDQNGN 4
           R SLILSKT K+ +D ++VNI+ I D+P  D++G+
Sbjct: 310 RFSLILSKTVKLDVDLSTVNIQRIDDEPGRDEDGH 344


>ref|XP_010249519.1| PREDICTED: probable RNA-dependent RNA polymerase 5 isoform X2
            [Nelumbo nucifera]
          Length = 1022

 Score =  256 bits (655), Expect = 2e-65
 Identities = 164/369 (44%), Positives = 225/369 (60%), Gaps = 20/369 (5%)
 Frame = -1

Query: 1050 EEESSKLLRR----KNPTLTASINHKLLTQSDESVNQESVDCSELKKFDCSVSNSPR--D 889
            EE S +LLRR    +  +LT  I +   +      +++SV  S  +  + SVS S R  D
Sbjct: 43   EEASLQLLRRISGQRIRSLTGFIIYMARSVCTTVSSRKSVCFSGPRSSESSVSVSMRGYD 102

Query: 888  DAVTQRMSLEDPDKEKNKRMMNVDQPSNQMINSEYSSTGKMKRLTCNDPHLLALGELEFK 709
            DA +    LE  +++K+   + ++  S + +                   L+ALGELEF+
Sbjct: 103  DATSHSPRLERLNRQKSG--LGLEGMSRESL-------------------LMALGELEFR 141

Query: 708  KMFLILSCCGKEYKLEDFISVDEIRRMKSLHMGHFETRLRTILGDDQYVKQTDRTKKLDW 529
            K FLILS  GK  +LED ++V+ I+++++L M  FE+ +   +G   YV+  DR K LDW
Sbjct: 142  KAFLILSYIGKN-RLEDVMTVETIKKIRNLPMVKFESEVWNDIGC-HYVEHADRMKFLDW 199

Query: 528  DSEKTFVYHCYVEPDGSYTFKGPYLQRDATHLHRVLGDDNVLLVKFSGNEGDRDCSSS-- 355
            DS KT++YHC V+PDGSY+FKGPYL    THL RVLGDD VL+VKF     +R+ S+S  
Sbjct: 200  DSGKTYLYHCLVDPDGSYSFKGPYLDTKKTHLQRVLGDDKVLIVKFIQESTNRNGSTSYN 259

Query: 354  ---PVYHRIRKEGILVGLRRFQFFVFKDGGKEXXXXXXXXXSFASSVKCYFVCLESSG-- 190
                 Y RI KEGIL+GL R+ FFVFKDGGKE           +S VKCYFVCLES+   
Sbjct: 260  ILNTNYGRIAKEGILLGLLRYHFFVFKDGGKEKKRKNPA----SSPVKCYFVCLESNVSL 315

Query: 189  -------LHDKSVSEARSHFMHIHNISSMPKYMPRLSLILSKTTKIQLDFASVNIEIIKD 31
                   L +KSV EARS FMH+H +SS+ KYM R SLILSKT K+++D ASV+I+ I+D
Sbjct: 316  DEKTQYILFNKSVHEARSVFMHVHTVSSISKYMARFSLILSKTIKLEVDLASVDIQKIED 375

Query: 30   QPCLDQNGN 4
            +PC D++G+
Sbjct: 376  EPCRDEDGH 384


>ref|XP_010249518.1| PREDICTED: probable RNA-dependent RNA polymerase 3 isoform X1
            [Nelumbo nucifera]
          Length = 1045

 Score =  256 bits (655), Expect = 2e-65
 Identities = 164/369 (44%), Positives = 225/369 (60%), Gaps = 20/369 (5%)
 Frame = -1

Query: 1050 EEESSKLLRR----KNPTLTASINHKLLTQSDESVNQESVDCSELKKFDCSVSNSPR--D 889
            EE S +LLRR    +  +LT  I +   +      +++SV  S  +  + SVS S R  D
Sbjct: 43   EEASLQLLRRISGQRIRSLTGFIIYMARSVCTTVSSRKSVCFSGPRSSESSVSVSMRGYD 102

Query: 888  DAVTQRMSLEDPDKEKNKRMMNVDQPSNQMINSEYSSTGKMKRLTCNDPHLLALGELEFK 709
            DA +    LE  +++K+   + ++  S + +                   L+ALGELEF+
Sbjct: 103  DATSHSPRLERLNRQKSG--LGLEGMSRESL-------------------LMALGELEFR 141

Query: 708  KMFLILSCCGKEYKLEDFISVDEIRRMKSLHMGHFETRLRTILGDDQYVKQTDRTKKLDW 529
            K FLILS  GK  +LED ++V+ I+++++L M  FE+ +   +G   YV+  DR K LDW
Sbjct: 142  KAFLILSYIGKN-RLEDVMTVETIKKIRNLPMVKFESEVWNDIGC-HYVEHADRMKFLDW 199

Query: 528  DSEKTFVYHCYVEPDGSYTFKGPYLQRDATHLHRVLGDDNVLLVKFSGNEGDRDCSSS-- 355
            DS KT++YHC V+PDGSY+FKGPYL    THL RVLGDD VL+VKF     +R+ S+S  
Sbjct: 200  DSGKTYLYHCLVDPDGSYSFKGPYLDTKKTHLQRVLGDDKVLIVKFIQESTNRNGSTSYN 259

Query: 354  ---PVYHRIRKEGILVGLRRFQFFVFKDGGKEXXXXXXXXXSFASSVKCYFVCLESSG-- 190
                 Y RI KEGIL+GL R+ FFVFKDGGKE           +S VKCYFVCLES+   
Sbjct: 260  ILNTNYGRIAKEGILLGLLRYHFFVFKDGGKEKKRKNPA----SSPVKCYFVCLESNVSL 315

Query: 189  -------LHDKSVSEARSHFMHIHNISSMPKYMPRLSLILSKTTKIQLDFASVNIEIIKD 31
                   L +KSV EARS FMH+H +SS+ KYM R SLILSKT K+++D ASV+I+ I+D
Sbjct: 316  DEKTQYILFNKSVHEARSVFMHVHTVSSISKYMARFSLILSKTIKLEVDLASVDIQKIED 375

Query: 30   QPCLDQNGN 4
            +PC D++G+
Sbjct: 376  EPCRDEDGH 384


>ref|XP_008791538.1| PREDICTED: probable RNA-dependent RNA polymerase 3 isoform X3
           [Phoenix dactylifera]
          Length = 957

 Score =  245 bits (625), Expect = 5e-62
 Identities = 143/262 (54%), Positives = 171/262 (65%), Gaps = 15/262 (5%)
 Frame = -1

Query: 744 PHLLALGELEFKKMFLILSCCGKEYKLEDFISVDEIRRMKSLHMGHFETRLRTILGDDQY 565
           P + ALGELEF K FLILS  GK   LE+ ISV  I+R+K   M  FE  +   LG  +Y
Sbjct: 133 PQMEALGELEFMKAFLILSYIGKS-SLENAISVGFIQRIKFFPMSLFELEVWRELGH-KY 190

Query: 564 VKQTDRTKKLDWDSEKTFVYHCYVEPDGSYTFKGPYLQRDATHLHRVLGDDNVLLVKF-- 391
           +  +DR K LDWDS KT VYHC V+ DG+Y FKGPYLQ   THL RVLGDDNVLLVKF  
Sbjct: 191 ISDSDRRKNLDWDSGKTHVYHCCVDLDGTYIFKGPYLQVTKTHLQRVLGDDNVLLVKFVE 250

Query: 390 --SGNEGDRDC--SSSPVYHRIRKEGILVGLRRFQFFVFKDGGKEXXXXXXXXXSFASSV 223
                +    C  SSS VYH+I KEGILVGLRR+ FFV KDGGKE           +S V
Sbjct: 251 EMRREKRSAHCIVSSSDVYHKIAKEGILVGLRRYYFFVSKDGGKEEKKKSPT----SSPV 306

Query: 222 KCYFVCLESSG---------LHDKSVSEARSHFMHIHNISSMPKYMPRLSLILSKTTKIQ 70
           KCYFV +ESS          L DK + EAR+ FMH H +SS+ KYM R SLILSKT K+ 
Sbjct: 307 KCYFVRMESSWAMDKDEPYILSDKLIHEARTIFMHAHTVSSLAKYMARFSLILSKTIKLD 366

Query: 69  LDFASVNIEIIKDQPCLDQNGN 4
           +D ASV+++ I+D PC+D++GN
Sbjct: 367 IDLASVHVKQIEDIPCMDEDGN 388


>ref|XP_008791522.1| PREDICTED: probable RNA-dependent RNA polymerase 5 isoform X1
           [Phoenix dactylifera]
          Length = 1006

 Score =  245 bits (625), Expect = 5e-62
 Identities = 143/262 (54%), Positives = 171/262 (65%), Gaps = 15/262 (5%)
 Frame = -1

Query: 744 PHLLALGELEFKKMFLILSCCGKEYKLEDFISVDEIRRMKSLHMGHFETRLRTILGDDQY 565
           P + ALGELEF K FLILS  GK   LE+ ISV  I+R+K   M  FE  +   LG  +Y
Sbjct: 133 PQMEALGELEFMKAFLILSYIGKS-SLENAISVGFIQRIKFFPMSLFELEVWRELGH-KY 190

Query: 564 VKQTDRTKKLDWDSEKTFVYHCYVEPDGSYTFKGPYLQRDATHLHRVLGDDNVLLVKF-- 391
           +  +DR K LDWDS KT VYHC V+ DG+Y FKGPYLQ   THL RVLGDDNVLLVKF  
Sbjct: 191 ISDSDRRKNLDWDSGKTHVYHCCVDLDGTYIFKGPYLQVTKTHLQRVLGDDNVLLVKFVE 250

Query: 390 --SGNEGDRDC--SSSPVYHRIRKEGILVGLRRFQFFVFKDGGKEXXXXXXXXXSFASSV 223
                +    C  SSS VYH+I KEGILVGLRR+ FFV KDGGKE           +S V
Sbjct: 251 EMRREKRSAHCIVSSSDVYHKIAKEGILVGLRRYYFFVSKDGGKEEKKKSPT----SSPV 306

Query: 222 KCYFVCLESSG---------LHDKSVSEARSHFMHIHNISSMPKYMPRLSLILSKTTKIQ 70
           KCYFV +ESS          L DK + EAR+ FMH H +SS+ KYM R SLILSKT K+ 
Sbjct: 307 KCYFVRMESSWAMDKDEPYILSDKLIHEARTIFMHAHTVSSLAKYMARFSLILSKTIKLD 366

Query: 69  LDFASVNIEIIKDQPCLDQNGN 4
           +D ASV+++ I+D PC+D++GN
Sbjct: 367 IDLASVHVKQIEDIPCMDEDGN 388


>ref|XP_010916733.1| PREDICTED: probable RNA-dependent RNA polymerase 3 [Elaeis
           guineensis]
          Length = 809

 Score =  243 bits (621), Expect = 1e-61
 Identities = 140/262 (53%), Positives = 171/262 (65%), Gaps = 15/262 (5%)
 Frame = -1

Query: 744 PHLLALGELEFKKMFLILSCCGKEYKLEDFISVDEIRRMKSLHMGHFETRLRTILGDDQY 565
           P + ALGELEF+K FLILS  GK   LE  ISV  I+R+K   M  FE+ +   +G  +Y
Sbjct: 133 PQMEALGELEFRKAFLILSYIGKS-SLESAISVGFIQRIKFFPMALFESEVWREIGH-KY 190

Query: 564 VKQTDRTKKLDWDSEKTFVYHCYVEPDGSYTFKGPYLQRDATHLHRVLGDDNVLLVKFS- 388
           +  +DR K LDWDS KT VYHC V+ DG+Y FKGPYLQ   THL RVLGDDNVLLVKF+ 
Sbjct: 191 ISDSDRRKALDWDSGKTHVYHCCVDLDGTYIFKGPYLQVTKTHLQRVLGDDNVLLVKFAE 250

Query: 387 ---GNEGDRDC--SSSPVYHRIRKEGILVGLRRFQFFVFKDGGKEXXXXXXXXXSFASSV 223
              G +    C  SS+ VYH+  KEGILVGLRR+ FFVFKDGGKE           +S+V
Sbjct: 251 DMHGEKRSAHCIVSSTDVYHKFAKEGILVGLRRYYFFVFKDGGKEEKKKSPT----SSTV 306

Query: 222 KCYFVCLESSG---------LHDKSVSEARSHFMHIHNISSMPKYMPRLSLILSKTTKIQ 70
           +CYFV +ESS          L DK   EAR  FMH H +SS+ KYM R SLILSKT K+ 
Sbjct: 307 RCYFVRMESSWAMDEDKPYILSDKLTHEARIIFMHAHMVSSLAKYMTRFSLILSKTIKLD 366

Query: 69  LDFASVNIEIIKDQPCLDQNGN 4
           +D  SV+++ I+D  C+D+NGN
Sbjct: 367 IDLTSVHVKDIEDITCMDENGN 388


>ref|XP_009385773.1| PREDICTED: probable RNA-dependent RNA polymerase 5 isoform X3 [Musa
           acuminata subsp. malaccensis]
          Length = 947

 Score =  242 bits (618), Expect = 3e-61
 Identities = 133/262 (50%), Positives = 173/262 (66%), Gaps = 15/262 (5%)
 Frame = -1

Query: 744 PHLLALGELEFKKMFLILSCCGKEYKLEDFISVDEIRRMKSLHMGHFETRLRTILGDDQY 565
           P L+ALG LEF+K FLILS  G+  KLE+ ISVD I +++   M  FE  +   +G  + 
Sbjct: 128 PQLVALGRLEFRKAFLILSYIGRN-KLEEMISVDFIEKIQLWPMKQFELEVWKEVGS-KC 185

Query: 564 VKQTDRTKKLDWDSEKTFVYHCYVEPDGSYTFKGPYLQRDATHLHRVLGDDNVLLVKFS- 388
           + + DR K +DWDS K  VYHC+V+ + ++TFKGPYLQ   THL R+LGDDNVLLVKF+ 
Sbjct: 186 ISELDRRKNMDWDSGKAHVYHCHVDLERNFTFKGPYLQLQRTHLQRILGDDNVLLVKFTD 245

Query: 387 --GNEGDRDCS---SSPVYHRIRKEGILVGLRRFQFFVFKDGGKEXXXXXXXXXSFASSV 223
               E    CS   S+ VYH++ +EGI VGLR +QFFVFKDGGKE           +S V
Sbjct: 246 EMSGEKRSSCSFQISNSVYHKVAEEGIFVGLRWYQFFVFKDGGKEKKKSPT-----SSPV 300

Query: 222 KCYFVCLESSG---------LHDKSVSEARSHFMHIHNISSMPKYMPRLSLILSKTTKIQ 70
           KCYFV +ES+          L DK + EAR+ FMHIH +SS+ KYM R SLILSKT K+ 
Sbjct: 301 KCYFVRMESNWGVDQEKAYILSDKFIHEARTVFMHIHTVSSLSKYMARFSLILSKTIKLD 360

Query: 69  LDFASVNIEIIKDQPCLDQNGN 4
           +D +S+++E+I D PC+D NGN
Sbjct: 361 IDLSSIHVEVIDDIPCVDDNGN 382


>ref|XP_009385772.1| PREDICTED: probable RNA-dependent RNA polymerase 5 isoform X2 [Musa
           acuminata subsp. malaccensis]
          Length = 995

 Score =  242 bits (618), Expect = 3e-61
 Identities = 133/262 (50%), Positives = 173/262 (66%), Gaps = 15/262 (5%)
 Frame = -1

Query: 744 PHLLALGELEFKKMFLILSCCGKEYKLEDFISVDEIRRMKSLHMGHFETRLRTILGDDQY 565
           P L+ALG LEF+K FLILS  G+  KLE+ ISVD I +++   M  FE  +   +G  + 
Sbjct: 127 PQLVALGRLEFRKAFLILSYIGRN-KLEEMISVDFIEKIQLWPMKQFELEVWKEVGS-KC 184

Query: 564 VKQTDRTKKLDWDSEKTFVYHCYVEPDGSYTFKGPYLQRDATHLHRVLGDDNVLLVKFS- 388
           + + DR K +DWDS K  VYHC+V+ + ++TFKGPYLQ   THL R+LGDDNVLLVKF+ 
Sbjct: 185 ISELDRRKNMDWDSGKAHVYHCHVDLERNFTFKGPYLQLQRTHLQRILGDDNVLLVKFTD 244

Query: 387 --GNEGDRDCS---SSPVYHRIRKEGILVGLRRFQFFVFKDGGKEXXXXXXXXXSFASSV 223
               E    CS   S+ VYH++ +EGI VGLR +QFFVFKDGGKE           +S V
Sbjct: 245 EMSGEKRSSCSFQISNSVYHKVAEEGIFVGLRWYQFFVFKDGGKEKKKSPT-----SSPV 299

Query: 222 KCYFVCLESSG---------LHDKSVSEARSHFMHIHNISSMPKYMPRLSLILSKTTKIQ 70
           KCYFV +ES+          L DK + EAR+ FMHIH +SS+ KYM R SLILSKT K+ 
Sbjct: 300 KCYFVRMESNWGVDQEKAYILSDKFIHEARTVFMHIHTVSSLSKYMARFSLILSKTIKLD 359

Query: 69  LDFASVNIEIIKDQPCLDQNGN 4
           +D +S+++E+I D PC+D NGN
Sbjct: 360 IDLSSIHVEVIDDIPCVDDNGN 381


>ref|XP_009385771.1| PREDICTED: probable RNA-dependent RNA polymerase 5 isoform X1 [Musa
           acuminata subsp. malaccensis]
          Length = 996

 Score =  242 bits (618), Expect = 3e-61
 Identities = 133/262 (50%), Positives = 173/262 (66%), Gaps = 15/262 (5%)
 Frame = -1

Query: 744 PHLLALGELEFKKMFLILSCCGKEYKLEDFISVDEIRRMKSLHMGHFETRLRTILGDDQY 565
           P L+ALG LEF+K FLILS  G+  KLE+ ISVD I +++   M  FE  +   +G  + 
Sbjct: 128 PQLVALGRLEFRKAFLILSYIGRN-KLEEMISVDFIEKIQLWPMKQFELEVWKEVGS-KC 185

Query: 564 VKQTDRTKKLDWDSEKTFVYHCYVEPDGSYTFKGPYLQRDATHLHRVLGDDNVLLVKFS- 388
           + + DR K +DWDS K  VYHC+V+ + ++TFKGPYLQ   THL R+LGDDNVLLVKF+ 
Sbjct: 186 ISELDRRKNMDWDSGKAHVYHCHVDLERNFTFKGPYLQLQRTHLQRILGDDNVLLVKFTD 245

Query: 387 --GNEGDRDCS---SSPVYHRIRKEGILVGLRRFQFFVFKDGGKEXXXXXXXXXSFASSV 223
               E    CS   S+ VYH++ +EGI VGLR +QFFVFKDGGKE           +S V
Sbjct: 246 EMSGEKRSSCSFQISNSVYHKVAEEGIFVGLRWYQFFVFKDGGKEKKKSPT-----SSPV 300

Query: 222 KCYFVCLESSG---------LHDKSVSEARSHFMHIHNISSMPKYMPRLSLILSKTTKIQ 70
           KCYFV +ES+          L DK + EAR+ FMHIH +SS+ KYM R SLILSKT K+ 
Sbjct: 301 KCYFVRMESNWGVDQEKAYILSDKFIHEARTVFMHIHTVSSLSKYMARFSLILSKTIKLD 360

Query: 69  LDFASVNIEIIKDQPCLDQNGN 4
           +D +S+++E+I D PC+D NGN
Sbjct: 361 IDLSSIHVEVIDDIPCVDDNGN 382


>ref|XP_006451272.1| hypothetical protein CICLE_v10007331mg [Citrus clementina]
            gi|568843311|ref|XP_006475557.1| PREDICTED: probable
            RNA-dependent RNA polymerase 3-like isoform X2 [Citrus
            sinensis] gi|557554498|gb|ESR64512.1| hypothetical
            protein CICLE_v10007331mg [Citrus clementina]
          Length = 1013

 Score =  235 bits (600), Expect = 4e-59
 Identities = 151/337 (44%), Positives = 191/337 (56%), Gaps = 18/337 (5%)
 Frame = -1

Query: 960  VNQESVDCSELKKFDCSVSNSPRDD----AVTQRMSLEDPDKEKNKRMMNVDQPSNQMIN 793
            V + + + S LK+  C   +SP+ +     VT    L  P     K+    DQ   Q   
Sbjct: 75   VKKRNNNGSPLKRV-CFSPSSPQQNRSPVTVTTVRLLNLPQDYVVKQSPVADQ---QPRG 130

Query: 792  SEYSSTGKMKRLTCNDPHLLALGELEFKKMFLILSCCGKEYKLEDFISVDEIRRMKSLHM 613
            S  SS     R   + P  +ALGELEF+K FLILS  G E  LE+ I+ DEIR M+ L M
Sbjct: 131  SPMSSISHAMRHRASIPQYVALGELEFRKAFLILSYIG-ENSLEEVITADEIRGMRDLQM 189

Query: 612  GHFETRLRTILGDDQYVKQTDRTKKLDWDSEKTFVYHCYVEPDGSYTFKGPYLQRDATHL 433
              FE+ +   LG    + Q DR   L WDS KT +YHC++   G+ TFKGPYL +  THL
Sbjct: 190  ARFESEVWEKLGRKN-ISQEDRRMSLKWDSGKTHMYHCHISTKGNCTFKGPYLNQTRTHL 248

Query: 432  HRVLGDDNVLLVKFSGNEGDRDCS-----SSPVYHRIRKEGILVGLRRFQFFVFKDGGKE 268
             R LGDDN+LLVKF    G    S     S   Y+ I +EGILVGLR + FFVFKDGGKE
Sbjct: 249  QRELGDDNILLVKFDEELGGHRSSNNWNDSYSKYNEIAREGILVGLRCYHFFVFKDGGKE 308

Query: 267  XXXXXXXXXSFASSVKCYFVCLESSGLHD---------KSVSEARSHFMHIHNISSMPKY 115
                        S VKCYFV +ESS   D         K+V EAR  FMH+  +SS+  Y
Sbjct: 309  EKKKDPS----TSPVKCYFVRMESSAFIDMGYQYILSGKTVHEARYMFMHVRTVSSVANY 364

Query: 114  MPRLSLILSKTTKIQLDFASVNIEIIKDQPCLDQNGN 4
            M RLSLILSKT K+++DF+ +NIE I+D+PC D++GN
Sbjct: 365  MSRLSLILSKTMKLEVDFSRINIERIEDEPCRDKDGN 401


>gb|KDO66531.1| hypothetical protein CISIN_1g001771mg [Citrus sinensis]
          Length = 1015

 Score =  234 bits (598), Expect = 7e-59
 Identities = 139/302 (46%), Positives = 178/302 (58%), Gaps = 25/302 (8%)
 Frame = -1

Query: 834 RMMNVDQPSNQMIN-----------SEYSSTGKMKRLTCNDPHLLALGELEFKKMFLILS 688
           R++N+ Q ++ ++            S  SS     R   + P  +ALGELEF+K FLILS
Sbjct: 108 RLLNLPQGTDYVVKQSPVADQQPRGSPMSSISHAMRHRASIPQYVALGELEFRKAFLILS 167

Query: 687 CCGKEYKLEDFISVDEIRRMKSLHMGHFETRLRTILGDDQYVKQTDRTKKLDWDSEKTFV 508
             G E  LE+ I+ DEIR M+ L M  FE+ +   LG    + Q DR   L WDS KT +
Sbjct: 168 YIG-ENSLEEVITADEIRGMRDLQMARFESEVWEKLGRKN-ISQEDRRMSLKWDSGKTHM 225

Query: 507 YHCYVEPDGSYTFKGPYLQRDATHLHRVLGDDNVLLVKFSGNEGDRDCS-----SSPVYH 343
           YHC++   G+ TFKGPYL +  THL R LGDDN+LLVKF    G    S     S   Y+
Sbjct: 226 YHCHISTKGNCTFKGPYLNQTRTHLQRELGDDNILLVKFDEELGGHRSSNNWNDSYSKYN 285

Query: 342 RIRKEGILVGLRRFQFFVFKDGGKEXXXXXXXXXSFASSVKCYFVCLESSGLHD------ 181
            I +EGILVGLR + FFVFKDGGKE            S VKCYFV +ESS   D      
Sbjct: 286 EIAREGILVGLRCYHFFVFKDGGKEEKKKDPS----TSPVKCYFVRMESSAFIDMGYQYI 341

Query: 180 ---KSVSEARSHFMHIHNISSMPKYMPRLSLILSKTTKIQLDFASVNIEIIKDQPCLDQN 10
              K+V EAR  FMH+  +SS+  YM RLSLILSKT K+++DF+ +NIE I+D+PC D++
Sbjct: 342 LSGKTVHEARYMFMHVRTVSSVANYMSRLSLILSKTMKLEVDFSRINIERIEDEPCRDKD 401

Query: 9   GN 4
           GN
Sbjct: 402 GN 403


>ref|XP_006451271.1| hypothetical protein CICLE_v10007331mg [Citrus clementina]
           gi|568843309|ref|XP_006475556.1| PREDICTED: probable
           RNA-dependent RNA polymerase 3-like isoform X1 [Citrus
           sinensis] gi|557554497|gb|ESR64511.1| hypothetical
           protein CICLE_v10007331mg [Citrus clementina]
          Length = 1015

 Score =  234 bits (598), Expect = 7e-59
 Identities = 139/302 (46%), Positives = 178/302 (58%), Gaps = 25/302 (8%)
 Frame = -1

Query: 834 RMMNVDQPSNQMIN-----------SEYSSTGKMKRLTCNDPHLLALGELEFKKMFLILS 688
           R++N+ Q ++ ++            S  SS     R   + P  +ALGELEF+K FLILS
Sbjct: 108 RLLNLPQGTDYVVKQSPVADQQPRGSPMSSISHAMRHRASIPQYVALGELEFRKAFLILS 167

Query: 687 CCGKEYKLEDFISVDEIRRMKSLHMGHFETRLRTILGDDQYVKQTDRTKKLDWDSEKTFV 508
             G E  LE+ I+ DEIR M+ L M  FE+ +   LG    + Q DR   L WDS KT +
Sbjct: 168 YIG-ENSLEEVITADEIRGMRDLQMARFESEVWEKLGRKN-ISQEDRRMSLKWDSGKTHM 225

Query: 507 YHCYVEPDGSYTFKGPYLQRDATHLHRVLGDDNVLLVKFSGNEGDRDCS-----SSPVYH 343
           YHC++   G+ TFKGPYL +  THL R LGDDN+LLVKF    G    S     S   Y+
Sbjct: 226 YHCHISTKGNCTFKGPYLNQTRTHLQRELGDDNILLVKFDEELGGHRSSNNWNDSYSKYN 285

Query: 342 RIRKEGILVGLRRFQFFVFKDGGKEXXXXXXXXXSFASSVKCYFVCLESSGLHD------ 181
            I +EGILVGLR + FFVFKDGGKE            S VKCYFV +ESS   D      
Sbjct: 286 EIAREGILVGLRCYHFFVFKDGGKEEKKKDPS----TSPVKCYFVRMESSAFIDMGYQYI 341

Query: 180 ---KSVSEARSHFMHIHNISSMPKYMPRLSLILSKTTKIQLDFASVNIEIIKDQPCLDQN 10
              K+V EAR  FMH+  +SS+  YM RLSLILSKT K+++DF+ +NIE I+D+PC D++
Sbjct: 342 LSGKTVHEARYMFMHVRTVSSVANYMSRLSLILSKTMKLEVDFSRINIERIEDEPCRDKD 401

Query: 9   GN 4
           GN
Sbjct: 402 GN 403


>ref|XP_006380469.1| hypothetical protein POPTR_0007s06560g [Populus trichocarpa]
           gi|550334279|gb|ERP58266.1| hypothetical protein
           POPTR_0007s06560g [Populus trichocarpa]
          Length = 899

 Score =  233 bits (595), Expect = 2e-58
 Identities = 134/281 (47%), Positives = 178/281 (63%), Gaps = 19/281 (6%)
 Frame = -1

Query: 789 EYSSTGKMKRLTCNDP----HLLALGELEFKKMFLILSCCGKEYKLEDFISVDEIRRMKS 622
           E SST   +R   N+     HL+ALGELEF+K FLILS  G +  LE+ +SVD+IR  K 
Sbjct: 18  EGSSTMDSQRQRGNESTTSQHLVALGELEFRKAFLILSYLGGK-NLEEVVSVDQIRGYKD 76

Query: 621 LHMGHFETRLRTILGDDQ-YVKQTDRTKKLDWDSEKTFVYHCYVEPDGSYTFKGPYLQRD 445
           L M  FE+++    G  + Y+K+ DR K LDWDS KT +YHC+V+PDGSY FKGPYL + 
Sbjct: 77  LPMRTFESKIWEAFGCRRDYIKEEDRVKYLDWDSGKTHIYHCHVDPDGSYRFKGPYLSKL 136

Query: 444 ATHLHRVLGDDNVLLVKFSGNEGDRDCSSSPV------YHRIRKEGILVGLRRFQFFVFK 283
              L R LGDDN+L+VKF   + DRD  S  +      Y+++  EGI VGLR ++FFVFK
Sbjct: 137 RNVLQRTLGDDNILMVKFGEVKDDRDSGSRSLDDYFSKYNKVLGEGIHVGLRCYRFFVFK 196

Query: 282 DGGKEXXXXXXXXXSFASSVKCYFVCLESSG--------LHDKSVSEARSHFMHIHNISS 127
           DGGKE            S VKC+FV +ES          L  K++ +ARS FMH+ N+SS
Sbjct: 197 DGGKEEKKKDPT----TSPVKCFFVRMESVASIDNQDNILSGKTIRQARSVFMHVDNLSS 252

Query: 126 MPKYMPRLSLILSKTTKIQLDFASVNIEIIKDQPCLDQNGN 4
           +  YM R SLILSKT  +++D + V+I+ I D+PC D++GN
Sbjct: 253 LSNYMARFSLILSKTMNLEVDLSCVDIKTIADEPCRDKDGN 293


>ref|XP_006380470.1| hypothetical protein POPTR_0007s06560g [Populus trichocarpa]
           gi|550334280|gb|ERP58267.1| hypothetical protein
           POPTR_0007s06560g [Populus trichocarpa]
          Length = 877

 Score =  233 bits (593), Expect = 3e-58
 Identities = 128/261 (49%), Positives = 170/261 (65%), Gaps = 15/261 (5%)
 Frame = -1

Query: 741 HLLALGELEFKKMFLILSCCGKEYKLEDFISVDEIRRMKSLHMGHFETRLRTILGDDQ-Y 565
           HL+ALGELEF+K FLILS  G +  LE+ +SVD+IR  K L M  FE+++    G  + Y
Sbjct: 16  HLVALGELEFRKAFLILSYLGGK-NLEEVVSVDQIRGYKDLPMRTFESKIWEAFGCRRDY 74

Query: 564 VKQTDRTKKLDWDSEKTFVYHCYVEPDGSYTFKGPYLQRDATHLHRVLGDDNVLLVKFSG 385
           +K+ DR K LDWDS KT +YHC+V+PDGSY FKGPYL +    L R LGDDN+L+VKF  
Sbjct: 75  IKEEDRVKYLDWDSGKTHIYHCHVDPDGSYRFKGPYLSKLRNVLQRTLGDDNILMVKFGE 134

Query: 384 NEGDRDCSSSPV------YHRIRKEGILVGLRRFQFFVFKDGGKEXXXXXXXXXSFASSV 223
            + DRD  S  +      Y+++  EGI VGLR ++FFVFKDGGKE            S V
Sbjct: 135 VKDDRDSGSRSLDDYFSKYNKVLGEGIHVGLRCYRFFVFKDGGKEEKKKDPT----TSPV 190

Query: 222 KCYFVCLESSG--------LHDKSVSEARSHFMHIHNISSMPKYMPRLSLILSKTTKIQL 67
           KC+FV +ES          L  K++ +ARS FMH+ N+SS+  YM R SLILSKT  +++
Sbjct: 191 KCFFVRMESVASIDNQDNILSGKTIRQARSVFMHVDNLSSLSNYMARFSLILSKTMNLEV 250

Query: 66  DFASVNIEIIKDQPCLDQNGN 4
           D + V+I+ I D+PC D++GN
Sbjct: 251 DLSCVDIKTIADEPCRDKDGN 271


>ref|XP_011025605.1| PREDICTED: probable RNA-dependent RNA polymerase 5 [Populus
            euphratica] gi|743837972|ref|XP_011025606.1| PREDICTED:
            probable RNA-dependent RNA polymerase 5 [Populus
            euphratica]
          Length = 1010

 Score =  231 bits (589), Expect = 7e-58
 Identities = 142/338 (42%), Positives = 196/338 (57%), Gaps = 30/338 (8%)
 Frame = -1

Query: 927  KKFDCSVSNSPRDDAVTQRMSLEDPDKEKNKR-------MMNVDQPSNQM----INSEYS 781
            K+F  ++S S     +   +S   P + KN+        +MN    S       +  E S
Sbjct: 73   KQFSPNISASSSSPNINSSLS-PSPQQPKNRSPITPTRLLMNSQSDSGAQSPIPLKLEGS 131

Query: 780  STGKMKRLTCNDP----HLLALGELEFKKMFLILSCCGKEYKLEDFISVDEIRRMKSLHM 613
             T   +R   N+     HL+ALGELEF+K FLIL+  G +  LE+ +S D+IR  K L M
Sbjct: 132  PTMDSQRQRGNESTTSQHLMALGELEFRKAFLILNYLGGK-NLEEVVSADQIRGYKDLPM 190

Query: 612  GHFETRLRTILGDDQ-YVKQTDRTKKLDWDSEKTFVYHCYVEPDGSYTFKGPYLQRDATH 436
              FE+++    G  + Y+K+ DR K  DWDS KT +YHC+V+PDGSY FKGPYL +    
Sbjct: 191  IIFESKIWEAFGCRRDYIKEEDRVKYPDWDSGKTHIYHCHVDPDGSYRFKGPYLSKLRNV 250

Query: 435  LHRVLGDDNVLLVKFSGNEGDRDCSSSPV------YHRIRKEGILVGLRRFQFFVFKDGG 274
            L R LGDDN+L+VKF   + DRD  SS +      Y+++  EGI VGLR ++FFVFKDGG
Sbjct: 251  LQRTLGDDNILMVKFGEEKDDRDSGSSSLDDYFSKYNKVLGEGIHVGLRCYRFFVFKDGG 310

Query: 273  KEXXXXXXXXXSFASSVKCYFVCLESSG--------LHDKSVSEARSHFMHIHNISSMPK 118
            KE            S VKC+FV +ES          L  K++ +ARS FMH+ N+SS+  
Sbjct: 311  KEEKKKDPT----TSPVKCFFVRMESVASIDNQDYILSGKTIRQARSIFMHVDNLSSLSN 366

Query: 117  YMPRLSLILSKTTKIQLDFASVNIEIIKDQPCLDQNGN 4
            YM R SLILSKT  +++D + V+I+ I D+PC D++GN
Sbjct: 367  YMARFSLILSKTMNLEVDLSFVDIKTIADEPCRDKDGN 404


>ref|XP_006381765.1| hypothetical protein POPTR_0006s17780g [Populus trichocarpa]
           gi|550336519|gb|ERP59562.1| hypothetical protein
           POPTR_0006s17780g [Populus trichocarpa]
          Length = 866

 Score =  230 bits (587), Expect = 1e-57
 Identities = 125/261 (47%), Positives = 170/261 (65%), Gaps = 15/261 (5%)
 Frame = -1

Query: 741 HLLALGELEFKKMFLILSCCGKEYKLEDFISVDEIRRMKSLHMGHFETRLRTILGDDQ-Y 565
           HL+ALGELEF+K FLIL+  G +  LE+ +S D+IR  K L M  FE+++    G  + Y
Sbjct: 16  HLVALGELEFRKAFLILNYLGGK-NLEEVVSADQIRGYKDLPMETFESKIWDAFGCRRDY 74

Query: 564 VKQTDRTKKLDWDSEKTFVYHCYVEPDGSYTFKGPYLQRDATHLHRVLGDDNVLLVKFSG 385
           +K+ DR K LDWDS K  +YHC+V+PDGSY FKGPYL +    L R LGDDN+L+VKF  
Sbjct: 75  IKEEDRVKYLDWDSGKAHIYHCHVDPDGSYRFKGPYLSKQRNVLQRTLGDDNILMVKFEE 134

Query: 384 NEGDRDCSSSPV------YHRIRKEGILVGLRRFQFFVFKDGGKEXXXXXXXXXSFASSV 223
            + +R   SS +      Y+++ +EGI VGLR ++FFVFKDGGKE            S V
Sbjct: 135 VKDERYSVSSSLDNYFAKYNKVLREGIHVGLRCYRFFVFKDGGKEEKKKDPT----TSPV 190

Query: 222 KCYFVCLESSGLHD--------KSVSEARSHFMHIHNISSMPKYMPRLSLILSKTTKIQL 67
           KC+FVC+ES    D        K++ +ARS FMH+ N+SS+  YM R SLILSKT  +++
Sbjct: 191 KCFFVCMESVASVDNQDNILCGKTIRQARSVFMHVDNLSSLSNYMARFSLILSKTMNLEV 250

Query: 66  DFASVNIEIIKDQPCLDQNGN 4
           D + V+I+ I D+PC D++GN
Sbjct: 251 DLSFVDIKPIADEPCRDKDGN 271


>ref|XP_013596637.1| PREDICTED: probable RNA-dependent RNA polymerase 5 isoform X3
           [Brassica oleracea var. oleracea]
          Length = 991

 Score =  230 bits (586), Expect = 2e-57
 Identities = 140/316 (44%), Positives = 184/316 (58%), Gaps = 13/316 (4%)
 Frame = -1

Query: 918 DCSVSNSPRDDAVTQRMSLEDPDKEKNKRMMNVDQPSNQMINSEYSSTGKMKRLTCNDPH 739
           D +++ SP+  A   R+ L +      +  ++ + PS + +  E  S G  + +    P 
Sbjct: 85  DQAINGSPQSPAARHRLRLRE------EMSLDSEAPSPKCMKRE--SYGGSQHIP---PE 133

Query: 738 LLALGELEFKKMFLILSCC-GKEYKLEDFISVDEIRRMKSLHMGHFETRLRTILGDDQYV 562
           +LALGELEFKK FL+LS   GK   L   I+ DEIR+ K L M  +E  +   LG D Y 
Sbjct: 134 ILALGELEFKKAFLLLSYIPGKS--LAQVITADEIRQWKDLSMVAYEAMVWERLGKD-YC 190

Query: 561 KQTDRTKKLDWDSEKTFVYHCYVEPDGSYTFKGPYLQRDATHLHRVLGDDNVLLVKFSG- 385
             TDR   L+WDS KT  Y C+V  DGSYT KGP L+   THLH+VLGDDNVL VKF+  
Sbjct: 191 SPTDRRVALEWDSGKTHYYQCHVALDGSYTLKGPLLEPTGTHLHKVLGDDNVLTVKFADV 250

Query: 384 NEGDRDCSSSP--VYHRIRKEGILVGLRRFQFFVFKDGGKEXXXXXXXXXSFASSVKCYF 211
            +    CS+ P   Y RI K+GI++GLRR+QFFVFKDGGKE              VKCYF
Sbjct: 251 QKKSSTCSNDPYSAYKRIAKDGIMIGLRRYQFFVFKDGGKEEKKKDFS----TKGVKCYF 306

Query: 210 VCLESSGLHD---------KSVSEARSHFMHIHNISSMPKYMPRLSLILSKTTKIQLDFA 58
           +  +S+  +D         KS+ EAR HFMH+H + S+ KYM R SLILSKT K+++D A
Sbjct: 307 IRTDSASSNDLGDPYIFSWKSIHEARMHFMHVHTLPSLAKYMARFSLILSKTKKLEVDMA 366

Query: 57  SVNIEIIKDQPCLDQN 10
            +  E I D  C D+N
Sbjct: 367 GITFEEIDDIHCHDEN 382


>ref|XP_013596639.1| PREDICTED: probable RNA-dependent RNA polymerase 5 isoform X4
           [Brassica oleracea var. oleracea]
          Length = 990

 Score =  229 bits (584), Expect = 3e-57
 Identities = 140/316 (44%), Positives = 183/316 (57%), Gaps = 13/316 (4%)
 Frame = -1

Query: 918 DCSVSNSPRDDAVTQRMSLEDPDKEKNKRMMNVDQPSNQMINSEYSSTGKMKRLTCNDPH 739
           D +++ SP+  A   R+ L +         ++ + PS + +  E  S G  + +    P 
Sbjct: 85  DQAINGSPQSPAARHRLRLREMS-------LDSEAPSPKCMKRE--SYGGSQHIP---PE 132

Query: 738 LLALGELEFKKMFLILSCC-GKEYKLEDFISVDEIRRMKSLHMGHFETRLRTILGDDQYV 562
           +LALGELEFKK FL+LS   GK   L   I+ DEIR+ K L M  +E  +   LG D Y 
Sbjct: 133 ILALGELEFKKAFLLLSYIPGKS--LAQVITADEIRQWKDLSMVAYEAMVWERLGKD-YC 189

Query: 561 KQTDRTKKLDWDSEKTFVYHCYVEPDGSYTFKGPYLQRDATHLHRVLGDDNVLLVKFSG- 385
             TDR   L+WDS KT  Y C+V  DGSYT KGP L+   THLH+VLGDDNVL VKF+  
Sbjct: 190 SPTDRRVALEWDSGKTHYYQCHVALDGSYTLKGPLLEPTGTHLHKVLGDDNVLTVKFADV 249

Query: 384 NEGDRDCSSSP--VYHRIRKEGILVGLRRFQFFVFKDGGKEXXXXXXXXXSFASSVKCYF 211
            +    CS+ P   Y RI K+GI++GLRR+QFFVFKDGGKE              VKCYF
Sbjct: 250 QKKSSTCSNDPYSAYKRIAKDGIMIGLRRYQFFVFKDGGKEEKKKDFS----TKGVKCYF 305

Query: 210 VCLESSGLHD---------KSVSEARSHFMHIHNISSMPKYMPRLSLILSKTTKIQLDFA 58
           +  +S+  +D         KS+ EAR HFMH+H + S+ KYM R SLILSKT K+++D A
Sbjct: 306 IRTDSASSNDLGDPYIFSWKSIHEARMHFMHVHTLPSLAKYMARFSLILSKTKKLEVDMA 365

Query: 57  SVNIEIIKDQPCLDQN 10
            +  E I D  C D+N
Sbjct: 366 GITFEEIDDIHCHDEN 381


>ref|XP_013596635.1| PREDICTED: probable RNA-dependent RNA polymerase 5 isoform X1
           [Brassica oleracea var. oleracea]
          Length = 993

 Score =  227 bits (578), Expect = 1e-56
 Identities = 140/318 (44%), Positives = 184/318 (57%), Gaps = 13/318 (4%)
 Frame = -1

Query: 918 DCSVSNSPRDDAVTQRMSLEDPDKEKNKRMMNVDQPSNQMINSEYSSTGKMKRLTCNDPH 739
           D +++ SP+  A   R+ L +      +  ++ + PS + +  E  S G  + +    P 
Sbjct: 85  DQAINGSPQSPAARHRLRLRE------EMSLDSEAPSPKCMKRE--SYGGSQHIP---PE 133

Query: 738 LLALGELEFKKMFLILSCC-GKEYKLEDFISVDEIRRMKSLHMGHFETRLRTILGDDQYV 562
           +LALGELEFKK FL+LS   GK   L   I+ DEIR+ K L M  +E  +   LG D Y 
Sbjct: 134 ILALGELEFKKAFLLLSYIPGKS--LAQVITADEIRQWKDLSMVAYEAMVWERLGKD-YC 190

Query: 561 KQTDRTKKLDWDSEKTFVYHCYVEPDGSYTFKGPYLQRDATHLHRVLGDDNVLLVKFSG- 385
             TDR   L+WDS KT  Y C+V  DGSYT KGP L+   THLH+VLGDDNVL VKF+  
Sbjct: 191 SPTDRRVALEWDSGKTHYYQCHVALDGSYTLKGPLLEPTGTHLHKVLGDDNVLTVKFADV 250

Query: 384 NEGDRDCSSSP--VYHRIRKEGILVGLRRFQFFVFKDGGKEXXXXXXXXXSFASSVKCYF 211
            +    CS+ P   Y RI K+GI++GLRR+QFFVFKDGGKE              VKCYF
Sbjct: 251 QKKSSTCSNDPYSAYKRIAKDGIMIGLRRYQFFVFKDGGKEEKKKDFS----TKGVKCYF 306

Query: 210 VCLESSGLHD---------KSVSEARSHFMHIHNISSMPKYMPRLSLILSKTTKIQLDFA 58
           +  +S+  +D         KS+ EAR HFMH+H + S+ KYM R SLILSKT K+++D A
Sbjct: 307 IRTDSASSNDLGDPYIFSWKSIHEARMHFMHVHTLPSLAKYMARFSLILSKTKKLEVDMA 366

Query: 57  SVNIEIIKDQPCLDQNGN 4
            +  E I D  C  Q+ N
Sbjct: 367 GITFEEIDDIHCHLQDEN 384