BLASTX nr result

ID: Papaver29_contig00041477 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver29_contig00041477
         (1644 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_010030088.1| PREDICTED: mRNA turnover protein 4 homolog [...    45   3e-07
ref|XP_004485517.1| PREDICTED: mRNA turnover protein 4 homolog [...    43   8e-07
gb|EPS65449.1| hypothetical protein M569_09326, partial [Genlise...    44   5e-06

>ref|XP_010030088.1| PREDICTED: mRNA turnover protein 4 homolog [Eucalyptus grandis]
           gi|629090799|gb|KCW57052.1| hypothetical protein
           EUGRSUZ_I02710 [Eucalyptus grandis]
          Length = 229

 Score = 44.7 bits (104), Expect(3) = 3e-07
 Identities = 27/91 (29%), Positives = 52/91 (57%)
 Frame = -3

Query: 841 RDDVGVLVTNKTEDQILRKGKFRAYEEFDFAKPGNTPSETLTYAEGAVLRLPTNISAEKL 662
           R + G+ +TN  ++++LR   F  +EE+DFA+ G+  +E +   EG ++         ++
Sbjct: 98  RGNTGLFLTNLPKEEVLRL--FNEFEEYDFARTGSNAAEKVELKEGPLVEF-----THEM 150

Query: 661 FPILQELEMPVKLTNDGRVIEMTQAYTVVKK 569
            P L++  MPV+L N G V+E+   + V ++
Sbjct: 151 EPFLRKQGMPVRL-NKG-VVELVSDFVVCEE 179



 Score = 32.3 bits (72), Expect(3) = 3e-07
 Identities = 20/60 (33%), Positives = 32/60 (53%)
 Frame = -2

Query: 1124 FMFSVLLMQRFRVPSTRNFLGSLADNFSRVYIGCNTDLSMALMLSETSELKPGLRRISSV 945
            ++FS   M+  +    R  L S     SR ++G N  + +AL  S   EL+PG+R++S V
Sbjct: 41   YVFSFENMRNLKFKEFREQLKSS----SRFFLGSNKVMQVALGRSVGDELRPGIRKVSKV 96



 Score = 26.6 bits (57), Expect(3) = 3e-07
 Identities = 11/39 (28%), Positives = 21/39 (53%)
 Frame = -2

Query: 593 SSLYCCKEKMRVTENASNILKHLNKKMFNYTVLPVCRWA 477
           S    C+E   ++  ++ IL+ L  KM  + +  +CRW+
Sbjct: 172 SDFVVCEEGKPLSPESARILRLLGIKMATFRLHLICRWS 210


>ref|XP_004485517.1| PREDICTED: mRNA turnover protein 4 homolog [Cicer arietinum]
          Length = 229

 Score = 43.1 bits (100), Expect(3) = 8e-07
 Identities = 28/91 (30%), Positives = 49/91 (53%)
 Frame = -3

Query: 841 RDDVGVLVTNKTEDQILRKGKFRAYEEFDFAKPGNTPSETLTYAEGAVLRLPTNISAEKL 662
           R D G++ TN  ++++ R   F  +EE+DFA+ G   +E +   EG     P      ++
Sbjct: 98  RGDAGMVFTNLPKEEVERL--FNGFEEYDFARTGGISTEKVELKEG-----PLEQFTHEM 150

Query: 661 FPILQELEMPVKLTNDGRVIEMTQAYTVVKK 569
            P L++  MPV+L N G V+E+   + V ++
Sbjct: 151 EPFLRKQGMPVRL-NKG-VVELVSDFVVCEE 179



 Score = 31.2 bits (69), Expect(3) = 8e-07
 Identities = 17/56 (30%), Positives = 31/56 (55%)
 Frame = -2

Query: 1112 VLLMQRFRVPSTRNFLGSLADNFSRVYIGCNTDLSMALMLSETSELKPGLRRISSV 945
            V   +  R    ++F  +L  + SR ++G N  + +AL  S + E+KPGL ++S +
Sbjct: 42   VFSFENMRNQKLKDFRETLKSS-SRFFLGSNKVMQVALGRSASDEIKPGLYKVSKL 96



 Score = 27.7 bits (60), Expect(3) = 8e-07
 Identities = 12/38 (31%), Positives = 20/38 (52%)
 Frame = -2

Query: 593 SSLYCCKEKMRVTENASNILKHLNKKMFNYTVLPVCRW 480
           S    C+E   ++  AS IL+ +  KM  + +  +CRW
Sbjct: 172 SDFVVCEEGKPLSPEASRILRLMGIKMATFKLHLICRW 209


>gb|EPS65449.1| hypothetical protein M569_09326, partial [Genlisea aurea]
          Length = 228

 Score = 43.9 bits (102), Expect(3) = 5e-06
 Identities = 28/91 (30%), Positives = 52/91 (57%)
 Frame = -3

Query: 841 RDDVGVLVTNKTEDQILRKGKFRAYEEFDFAKPGNTPSETLTYAEGAVLRLPTNISAEKL 662
           R + G+  T+  ++++ R   F  YEE+D+++ GN+ +ET+   EG     P +    ++
Sbjct: 98  RGNSGLCFTSLPKEEVERL--FNEYEEYDYSRTGNSATETVELKEG-----PLDQFTHEM 150

Query: 661 FPILQELEMPVKLTNDGRVIEMTQAYTVVKK 569
            P L++  MPV+L N G V+E+   Y V ++
Sbjct: 151 EPFLRKQGMPVRL-NKG-VVELVSDYVVCEE 179



 Score = 33.5 bits (75), Expect(3) = 5e-06
 Identities = 21/58 (36%), Positives = 32/58 (55%)
 Frame = -2

Query: 1124 FMFSVLLMQRFRVPSTRNFLGSLADNFSRVYIGCNTDLSMALMLSETSELKPGLRRIS 951
            ++FS   M+  +    R  L S     SR ++G N  + +AL  SE+ E+KPGL +IS
Sbjct: 41   YVFSFENMRNLKFKEFREQLKSS----SRFFLGSNKVMQVALGRSESDEIKPGLYKIS 94



 Score = 21.9 bits (45), Expect(3) = 5e-06
 Identities = 11/37 (29%), Positives = 19/37 (51%)
 Frame = -2

Query: 593 SSLYCCKEKMRVTENASNILKHLNKKMFNYTVLPVCR 483
           S    C+E   ++  A+ IL+ L  +M  + +  VCR
Sbjct: 172 SDYVVCEEGKPLSPEAARILRLLGIRMATFKLHLVCR 208


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