BLASTX nr result

ID: Papaver29_contig00039569 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver29_contig00039569
         (398 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|KNA04698.1| hypothetical protein SOVF_197280, partial [Spinac...    48   1e-11

>gb|KNA04698.1| hypothetical protein SOVF_197280, partial [Spinacia oleracea]
          Length = 210

 Score = 48.1 bits (113), Expect(3) = 1e-11
 Identities = 22/33 (66%), Positives = 26/33 (78%)
 Frame = -3

Query: 396 LYYLDSVLSSAKGVQQGDPLGSLLFALAIHPLV 298
           LYY +  L S +GVQQGDPLG LLF+L +HPLV
Sbjct: 122 LYYGEHTLWSCQGVQQGDPLGPLLFSLVLHPLV 154



 Score = 37.7 bits (86), Expect(3) = 1e-11
 Identities = 15/32 (46%), Positives = 23/32 (71%)
 Frame = -2

Query: 244 TTEVSKSLKIIQDDGPSYGLHLNISKTKIFCP 149
           T  V K L++I ++GP  GLH+N+ KT++F P
Sbjct: 179 TLVVGKVLELILEEGPHLGLHVNVEKTEVFWP 210



 Score = 29.6 bits (65), Expect(3) = 1e-11
 Identities = 13/19 (68%), Positives = 13/19 (68%)
 Frame = -1

Query: 299 SCTLDLHAWYLDDGTIFWD 243
           S  L L AWYLDDGTI  D
Sbjct: 160 SFDLSLQAWYLDDGTIVGD 178


Top