BLASTX nr result

ID: Papaver29_contig00039551 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver29_contig00039551
         (462 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_010270188.1| PREDICTED: putative DUF21 domain-containing ...    59   2e-06

>ref|XP_010270188.1| PREDICTED: putative DUF21 domain-containing protein At3g13070,
           chloroplastic isoform X1 [Nelumbo nucifera]
           gi|720045381|ref|XP_010270189.1| PREDICTED: putative
           DUF21 domain-containing protein At3g13070, chloroplastic
           isoform X2 [Nelumbo nucifera]
          Length = 669

 Score = 58.5 bits (140), Expect = 2e-06
 Identities = 40/116 (34%), Positives = 58/116 (50%), Gaps = 13/116 (11%)
 Frame = -2

Query: 320 MDFAVDFSVLGQSSFICGGKSSVFVPFNRQFRISTKFIPNV----RIITMKRINPRFVRN 153
           MD   + S+LG+S FI GGK S FV  NR+ RISTK  P +    R++T+ R+ P   RN
Sbjct: 1   MDLGAEASILGRSRFIYGGKPSFFVACNRELRISTKTYPRILHYPRLMTIHRVYPYIPRN 60

Query: 152 SSR-KLNGIKIFDAEV--------XXXXXXXXXXXXXXXEWLMVLAKRGFLLAAVV 12
           + R KL  +++ +  V                       ++L VL K G +LA +V
Sbjct: 61  ACRSKLQEVEVINGNVHLKSVIEEKESGMVVGSVADSKFKFLEVLVKHGLVLATMV 116


Top