BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver29_contig00038945
         (710 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_010278136.1| PREDICTED: chloroplastic group IIA intron sp...   119   1e-24
ref|XP_010278134.1| PREDICTED: chloroplastic group IIA intron sp...   119   1e-24
ref|XP_010278131.1| PREDICTED: chloroplastic group IIA intron sp...   119   1e-24
ref|XP_010278130.1| PREDICTED: chloroplastic group IIA intron sp...   119   1e-24
ref|XP_008362022.1| PREDICTED: chloroplastic group IIA intron sp...    96   2e-17
ref|XP_008353301.1| PREDICTED: chloroplastic group IIA intron sp...    96   2e-17
ref|XP_008224429.1| PREDICTED: chloroplastic group IIA intron sp...    91   6e-16
ref|XP_008362021.1| PREDICTED: chloroplastic group IIA intron sp...    91   7e-16
ref|XP_007227020.1| hypothetical protein PRUPE_ppa001134mg [Prun...    89   3e-15
gb|KJB21905.1| hypothetical protein B456_004G020400 [Gossypium r...    88   6e-15
ref|XP_012473005.1| PREDICTED: chloroplastic group IIA intron sp...    88   6e-15
gb|KHG05234.1| Chloroplastic group IIA intron splicing facilitat...    87   1e-14
ref|XP_008391092.1| PREDICTED: chloroplastic group IIA intron sp...    87   1e-14
ref|XP_012457612.1| PREDICTED: LOW QUALITY PROTEIN: chloroplasti...    82   4e-13
ref|XP_007034977.1| CRM family member 3A isoform 4 [Theobroma ca...    79   4e-12
ref|XP_007034976.1| CRM family member 3A isoform 3 [Theobroma ca...    79   4e-12
ref|XP_007034975.1| CRM family member 3A isoform 2 [Theobroma ca...    79   4e-12
ref|XP_007034974.1| CRM family member 3A isoform 1 [Theobroma ca...    79   4e-12
emb|CAN79523.1| hypothetical protein VITISV_010525 [Vitis vinifera]    77   1e-11
ref|XP_011030575.1| PREDICTED: chloroplastic group IIA intron sp...    75   3e-11

>ref|XP_010278136.1| PREDICTED: chloroplastic group IIA intron splicing facilitator
           CRS1, chloroplastic isoform X4 [Nelumbo nucifera]
          Length = 880

 Score =  119 bits (299), Expect = 1e-24
 Identities = 81/196 (41%), Positives = 103/196 (52%), Gaps = 30/196 (15%)
 Frame = -1

Query: 533 MSVVPSCQIYQASFLDSFQTTSLSRFSGYPLQFARXXXXXXXXXXXXXITQNSISSNSVP 354
           M+++PSCQ Y  SFLDSFQ+ SLSRF G  L   R             ++ N+I S+S+P
Sbjct: 1   MALLPSCQFYPTSFLDSFQS-SLSRFQGSRLLILRYASSIRFKRHNFSVSHNNIISDSLP 59

Query: 353 ERNPPRNNS------------------QKTASNGGLSNN----EWNEIHHSNTIKRPQ-- 246
           E+N  +N+S                   ++ SNG  S+N    +WNE H  N   RPQ  
Sbjct: 60  EKNQQKNSSFALKKNNDRRYFAEETPISQSISNGDFSSNSWISKWNETHQQNLPNRPQTV 119

Query: 245 -GYKNSGGFXXXXXXXXXXXXXXXXXT-MEKIVEKLKRFGYVDDSSEREGRRVPERSSVE 72
             Y+N G                   + M+KIVEKLKRFGYVDD +ER   RVPE+ SVE
Sbjct: 120 LDYRNGGDVSSSEDDENNTSSSSGSSSTMDKIVEKLKRFGYVDDMNERR-ERVPEKGSVE 178

Query: 71  DIFYIEEG----TRGG 36
           DIFY+EEG    TRGG
Sbjct: 179 DIFYVEEGMLPNTRGG 194


>ref|XP_010278134.1| PREDICTED: chloroplastic group IIA intron splicing facilitator
           CRS1, chloroplastic isoform X3 [Nelumbo nucifera]
          Length = 896

 Score =  119 bits (299), Expect = 1e-24
 Identities = 81/196 (41%), Positives = 103/196 (52%), Gaps = 30/196 (15%)
 Frame = -1

Query: 533 MSVVPSCQIYQASFLDSFQTTSLSRFSGYPLQFARXXXXXXXXXXXXXITQNSISSNSVP 354
           M+++PSCQ Y  SFLDSFQ+ SLSRF G  L   R             ++ N+I S+S+P
Sbjct: 1   MALLPSCQFYPTSFLDSFQS-SLSRFQGSRLLILRYASSIRFKRHNFSVSHNNIISDSLP 59

Query: 353 ERNPPRNNS------------------QKTASNGGLSNN----EWNEIHHSNTIKRPQ-- 246
           E+N  +N+S                   ++ SNG  S+N    +WNE H  N   RPQ  
Sbjct: 60  EKNQQKNSSFALKKNNDRRYFAEETPISQSISNGDFSSNSWISKWNETHQQNLPNRPQTV 119

Query: 245 -GYKNSGGFXXXXXXXXXXXXXXXXXT-MEKIVEKLKRFGYVDDSSEREGRRVPERSSVE 72
             Y+N G                   + M+KIVEKLKRFGYVDD +ER   RVPE+ SVE
Sbjct: 120 LDYRNGGDVSSSEDDENNTSSSSGSSSTMDKIVEKLKRFGYVDDMNERR-ERVPEKGSVE 178

Query: 71  DIFYIEEG----TRGG 36
           DIFY+EEG    TRGG
Sbjct: 179 DIFYVEEGMLPNTRGG 194


>ref|XP_010278131.1| PREDICTED: chloroplastic group IIA intron splicing facilitator
           CRS1, chloroplastic isoform X2 [Nelumbo nucifera]
           gi|720071686|ref|XP_010278132.1| PREDICTED:
           chloroplastic group IIA intron splicing facilitator
           CRS1, chloroplastic isoform X2 [Nelumbo nucifera]
           gi|720071690|ref|XP_010278133.1| PREDICTED:
           chloroplastic group IIA intron splicing facilitator
           CRS1, chloroplastic isoform X2 [Nelumbo nucifera]
          Length = 914

 Score =  119 bits (299), Expect = 1e-24
 Identities = 81/196 (41%), Positives = 103/196 (52%), Gaps = 30/196 (15%)
 Frame = -1

Query: 533 MSVVPSCQIYQASFLDSFQTTSLSRFSGYPLQFARXXXXXXXXXXXXXITQNSISSNSVP 354
           M+++PSCQ Y  SFLDSFQ+ SLSRF G  L   R             ++ N+I S+S+P
Sbjct: 1   MALLPSCQFYPTSFLDSFQS-SLSRFQGSRLLILRYASSIRFKRHNFSVSHNNIISDSLP 59

Query: 353 ERNPPRNNS------------------QKTASNGGLSNN----EWNEIHHSNTIKRPQ-- 246
           E+N  +N+S                   ++ SNG  S+N    +WNE H  N   RPQ  
Sbjct: 60  EKNQQKNSSFALKKNNDRRYFAEETPISQSISNGDFSSNSWISKWNETHQQNLPNRPQTV 119

Query: 245 -GYKNSGGFXXXXXXXXXXXXXXXXXT-MEKIVEKLKRFGYVDDSSEREGRRVPERSSVE 72
             Y+N G                   + M+KIVEKLKRFGYVDD +ER   RVPE+ SVE
Sbjct: 120 LDYRNGGDVSSSEDDENNTSSSSGSSSTMDKIVEKLKRFGYVDDMNERR-ERVPEKGSVE 178

Query: 71  DIFYIEEG----TRGG 36
           DIFY+EEG    TRGG
Sbjct: 179 DIFYVEEGMLPNTRGG 194


>ref|XP_010278130.1| PREDICTED: chloroplastic group IIA intron splicing facilitator
           CRS1, chloroplastic isoform X1 [Nelumbo nucifera]
          Length = 919

 Score =  119 bits (299), Expect = 1e-24
 Identities = 81/196 (41%), Positives = 103/196 (52%), Gaps = 30/196 (15%)
 Frame = -1

Query: 533 MSVVPSCQIYQASFLDSFQTTSLSRFSGYPLQFARXXXXXXXXXXXXXITQNSISSNSVP 354
           M+++PSCQ Y  SFLDSFQ+ SLSRF G  L   R             ++ N+I S+S+P
Sbjct: 1   MALLPSCQFYPTSFLDSFQS-SLSRFQGSRLLILRYASSIRFKRHNFSVSHNNIISDSLP 59

Query: 353 ERNPPRNNS------------------QKTASNGGLSNN----EWNEIHHSNTIKRPQ-- 246
           E+N  +N+S                   ++ SNG  S+N    +WNE H  N   RPQ  
Sbjct: 60  EKNQQKNSSFALKKNNDRRYFAEETPISQSISNGDFSSNSWISKWNETHQQNLPNRPQTV 119

Query: 245 -GYKNSGGFXXXXXXXXXXXXXXXXXT-MEKIVEKLKRFGYVDDSSEREGRRVPERSSVE 72
             Y+N G                   + M+KIVEKLKRFGYVDD +ER   RVPE+ SVE
Sbjct: 120 LDYRNGGDVSSSEDDENNTSSSSGSSSTMDKIVEKLKRFGYVDDMNERR-ERVPEKGSVE 178

Query: 71  DIFYIEEG----TRGG 36
           DIFY+EEG    TRGG
Sbjct: 179 DIFYVEEGMLPNTRGG 194


>ref|XP_008362022.1| PREDICTED: chloroplastic group IIA intron splicing facilitator
           CRS1, chloroplastic-like isoform X2 [Malus domestica]
          Length = 864

 Score = 95.9 bits (237), Expect = 2e-17
 Identities = 69/168 (41%), Positives = 90/168 (53%), Gaps = 6/168 (3%)
 Frame = -1

Query: 533 MSVVPSCQIYQASFLDSFQTTSLSRFSGYPLQFARXXXXXXXXXXXXXITQNSISSNSVP 354
           M+++PS Q+Y  S  DSFQ+ SLS+F+   +QF R              T   ISS   P
Sbjct: 1   MTLMPSRQLYPTSLFDSFQS-SLSKFNSAHIQFFRYGSSIPFKNHTFYTTHCIISSPLNP 59

Query: 353 ERNPPRNNSQKTASNGGLSNNEWNEIHHSNTIKRPQG---YKNSGGFXXXXXXXXXXXXX 183
           + NP RN      S+  +  N+WNE H  N  K P+    Y++S G              
Sbjct: 60  DPNPMRN----LCSSSWI--NKWNESHKHNRPKPPRAVLDYQSSEG--------GNGSGN 105

Query: 182 XXXXTMEKIVEKLKRFGYVDDSSEREGR---RVPERSSVEDIFYIEEG 48
               TMEKIVEKLK+FGYVDDS++ +G    RV E+ SVEDIFY+EEG
Sbjct: 106 GGGSTMEKIVEKLKKFGYVDDSNDSKGEVRGRVIEKGSVEDIFYVEEG 153


>ref|XP_008353301.1| PREDICTED: chloroplastic group IIA intron splicing facilitator
           CRS1, chloroplastic-like [Malus domestica]
          Length = 493

 Score = 95.9 bits (237), Expect = 2e-17
 Identities = 69/168 (41%), Positives = 90/168 (53%), Gaps = 6/168 (3%)
 Frame = -1

Query: 533 MSVVPSCQIYQASFLDSFQTTSLSRFSGYPLQFARXXXXXXXXXXXXXITQNSISSNSVP 354
           M+++PS Q+Y  S  DSFQ+ SLS+F+   +QF R              T   ISS   P
Sbjct: 1   MTLMPSRQLYPTSLFDSFQS-SLSKFNSAHIQFFRYGSSIPFKNHTFYATHCIISSPLNP 59

Query: 353 ERNPPRNNSQKTASNGGLSNNEWNEIHHSNTIKRPQG---YKNSGGFXXXXXXXXXXXXX 183
           + NP RN      S+  +  N+WNE H  N  K P+    Y++S G              
Sbjct: 60  DPNPMRN----LCSSSWI--NKWNESHKHNRPKPPRAVLDYQSSEG--------GNGSGN 105

Query: 182 XXXXTMEKIVEKLKRFGYVDDSSEREGR---RVPERSSVEDIFYIEEG 48
               TMEKIVEKLK+FGYVDDS++ +G    RV E+ SVEDIFY+EEG
Sbjct: 106 GGGSTMEKIVEKLKKFGYVDDSNDSKGEVRGRVIEKGSVEDIFYVEEG 153


>ref|XP_008224429.1| PREDICTED: chloroplastic group IIA intron splicing facilitator
           CRS1, chloroplastic [Prunus mume]
          Length = 899

 Score = 91.3 bits (225), Expect = 6e-16
 Identities = 71/192 (36%), Positives = 91/192 (47%), Gaps = 26/192 (13%)
 Frame = -1

Query: 533 MSVVPSCQIYQASFLDSFQTTSLSRFSGYPLQFARXXXXXXXXXXXXXITQNSISSNSVP 354
           M++VPS Q+Y  S  DSFQ+ S S+F G  +   R              T  +ISS   P
Sbjct: 1   MTLVPSRQLYPTSLFDSFQS-SFSKFHGPHIHLFRCGSSIPFKKHTFYATHYTISSTLNP 59

Query: 353 ERNPPRNNS----------QKTASNGGLSN--NEWNEIHHSNTIKRPQGY-----KNSGG 225
           E+NP R ++           K   N   S+  ++WNE H  N  K P+         SG 
Sbjct: 60  EQNPLRKSNFVRKNQPISQYKPKKNFSSSSWIDKWNESHKHNCPKPPRAVLDYQSSESGN 119

Query: 224 FXXXXXXXXXXXXXXXXXT--MEKIVEKLKRFGYVDDSSEREGR---RVPERSSVEDIFY 60
                                MEKIVEKLK+FGYVDDS+E +G    RV E+ SVEDIFY
Sbjct: 120 LSGSGYAEGDSGGGRNSSGSTMEKIVEKLKKFGYVDDSNENKGEVRDRVMEKGSVEDIFY 179

Query: 59  IEEG----TRGG 36
           +EEG    +RGG
Sbjct: 180 VEEGKLPNSRGG 191


>ref|XP_008362021.1| PREDICTED: chloroplastic group IIA intron splicing facilitator
           CRS1, chloroplastic-like isoform X1 [Malus domestica]
          Length = 882

 Score = 90.9 bits (224), Expect = 7e-16
 Identities = 70/180 (38%), Positives = 92/180 (51%), Gaps = 18/180 (10%)
 Frame = -1

Query: 533 MSVVPSCQIYQASFLDSFQTTSLSRFSGYPLQFARXXXXXXXXXXXXXITQNSISSNSVP 354
           M+++PS Q+Y  S  DSFQ+ SLS+F+   +QF R              T   ISS   P
Sbjct: 1   MTLMPSRQLYPTSLFDSFQS-SLSKFNSAHIQFFRYGSSIPFKNHTFYTTHCIISSPLNP 59

Query: 353 ERNPPRNNSQ----------KTASNGGLSN--NEWNEIHHSNTIKRPQG---YKNSGGFX 219
           + NP R ++           K   N   S+  N+WNE H  N  K P+    Y++S G  
Sbjct: 60  DPNPMRKSNFVGRNRPVYQCKLKRNLCSSSWINKWNESHKHNRPKPPRAVLDYQSSEG-- 117

Query: 218 XXXXXXXXXXXXXXXXTMEKIVEKLKRFGYVDDSSEREGR---RVPERSSVEDIFYIEEG 48
                           TMEKIVEKLK+FGYVDDS++ +G    RV E+ SVEDIFY+EEG
Sbjct: 118 ------GNGSGNGGGSTMEKIVEKLKKFGYVDDSNDSKGEVRGRVIEKGSVEDIFYVEEG 171


>ref|XP_007227020.1| hypothetical protein PRUPE_ppa001134mg [Prunus persica]
           gi|462423956|gb|EMJ28219.1| hypothetical protein
           PRUPE_ppa001134mg [Prunus persica]
          Length = 899

 Score = 89.0 bits (219), Expect = 3e-15
 Identities = 71/192 (36%), Positives = 90/192 (46%), Gaps = 26/192 (13%)
 Frame = -1

Query: 533 MSVVPSCQIYQASFLDSFQTTSLSRFSGYPLQFARXXXXXXXXXXXXXITQNSISSNSVP 354
           M++VPS Q+Y  S  DSFQ+ S S+F G  +   R              T  +ISS   P
Sbjct: 1   MTLVPSRQLYPTSLFDSFQS-SFSKFHGPHIHLFRCGSSIPFKKHTFYATHYTISSTLNP 59

Query: 353 ERNPPRNNS----------QKTASNGGLSN--NEWNEIHHSNTIKRPQGY-----KNSGG 225
           E+NP R ++           K   N   S+  ++WNE H  N  K P+         SG 
Sbjct: 60  EQNPLRKSNFVRKNQPISQYKPKKNFSSSSWIDKWNESHKHNRPKPPRAVLDYQSSESGN 119

Query: 224 FXXXXXXXXXXXXXXXXXT--MEKIVEKLKRFGYVDDSSEREGR---RVPERSSVEDIFY 60
                                MEKIVEKLK+FGYVDDS+E +G     V E+ SVEDIFY
Sbjct: 120 LSGSGYAEGDGGGGRNSSGSTMEKIVEKLKKFGYVDDSNENKGEVRDSVIEKGSVEDIFY 179

Query: 59  IEEG----TRGG 36
           IEEG    +RGG
Sbjct: 180 IEEGMLPNSRGG 191


>gb|KJB21905.1| hypothetical protein B456_004G020400 [Gossypium raimondii]
          Length = 770

 Score = 87.8 bits (216), Expect = 6e-15
 Identities = 65/171 (38%), Positives = 89/171 (52%), Gaps = 12/171 (7%)
 Frame = -1

Query: 503 QASFLDSFQTTSLSRFSGYPLQFARXXXXXXXXXXXXXI-TQNSISSNSVPERNPP-RNN 330
           + +FLDSFQT SLSRF G PL F R               ++++I+SN+    NP  +  
Sbjct: 11  KTTFLDSFQT-SLSRFHGLPLPFFRYSSSHFPLKTLNFCASKHAITSNAQIHPNPESKTK 69

Query: 329 SQKTASNGGLSNNEWNEIHHSNTIKRPQ---GYKNSGGFXXXXXXXXXXXXXXXXXTMEK 159
           +  T S+  L N  WN+ H  N  K P+    Y+  G                   TMEK
Sbjct: 70  AFPTFSSNWLDN--WNKTHKRNGPKPPKTVFNYRKDGNLWSLSYSKSDNNGSGSSSTMEK 127

Query: 158 IVEKLKRFGYVDDSSER---EGRRVPERSSVEDIFYIEEG----TRGGDRK 27
           IVEKLK+FGY+ + +E+   + R+V ER S+ED+FY+EEG    TRGG  K
Sbjct: 128 IVEKLKKFGYIGEENEQKEEQPRKVIERGSIEDMFYVEEGMLPNTRGGFSK 178


>ref|XP_012473005.1| PREDICTED: chloroplastic group IIA intron splicing facilitator
           CRS1, chloroplastic-like [Gossypium raimondii]
           gi|763754573|gb|KJB21904.1| hypothetical protein
           B456_004G020400 [Gossypium raimondii]
          Length = 853

 Score = 87.8 bits (216), Expect = 6e-15
 Identities = 65/171 (38%), Positives = 89/171 (52%), Gaps = 12/171 (7%)
 Frame = -1

Query: 503 QASFLDSFQTTSLSRFSGYPLQFARXXXXXXXXXXXXXI-TQNSISSNSVPERNPP-RNN 330
           + +FLDSFQT SLSRF G PL F R               ++++I+SN+    NP  +  
Sbjct: 11  KTTFLDSFQT-SLSRFHGLPLPFFRYSSSHFPLKTLNFCASKHAITSNAQIHPNPESKTK 69

Query: 329 SQKTASNGGLSNNEWNEIHHSNTIKRPQ---GYKNSGGFXXXXXXXXXXXXXXXXXTMEK 159
           +  T S+  L N  WN+ H  N  K P+    Y+  G                   TMEK
Sbjct: 70  AFPTFSSNWLDN--WNKTHKRNGPKPPKTVFNYRKDGNLWSLSYSKSDNNGSGSSSTMEK 127

Query: 158 IVEKLKRFGYVDDSSER---EGRRVPERSSVEDIFYIEEG----TRGGDRK 27
           IVEKLK+FGY+ + +E+   + R+V ER S+ED+FY+EEG    TRGG  K
Sbjct: 128 IVEKLKKFGYIGEENEQKEEQPRKVIERGSIEDMFYVEEGMLPNTRGGFSK 178


>gb|KHG05234.1| Chloroplastic group IIA intron splicing facilitator CRS1,
           chloroplastic [Gossypium arboreum]
          Length = 853

 Score = 87.0 bits (214), Expect = 1e-14
 Identities = 66/171 (38%), Positives = 85/171 (49%), Gaps = 12/171 (7%)
 Frame = -1

Query: 503 QASFLDSFQTTSLSRFSGYPLQFARXXXXXXXXXXXXXITQN-SISSNSVPERNPP-RNN 330
           + +FLDSFQT SLSRF G P  F R                N +I+SNS    NP  +  
Sbjct: 11  KTTFLDSFQT-SLSRFHGLPHPFFRYSSFHFPLKTLNFCANNHTITSNSQIHPNPESKTK 69

Query: 329 SQKTASNGGLSNNEWNEIHHSNTIKRPQ---GYKNSGGFXXXXXXXXXXXXXXXXXTMEK 159
              T S+  L N  WN+ H  N  K P+    Y+  G                   TMEK
Sbjct: 70  GFPTFSSNWLDN--WNKTHKRNGPKPPKTVFNYRKDGNLWSLSYSKSDNNGSGSSSTMEK 127

Query: 158 IVEKLKRFGYVDDSSER---EGRRVPERSSVEDIFYIEEG----TRGGDRK 27
           IVEKLK+FGY+ + +E+   + R+V ER S+ED+FY+EEG    TRGG  K
Sbjct: 128 IVEKLKKFGYIGEENEQKEEQPRKVIERGSIEDMFYVEEGMLPNTRGGFSK 178


>ref|XP_008391092.1| PREDICTED: chloroplastic group IIA intron splicing facilitator
           CRS1, chloroplastic [Malus domestica]
          Length = 894

 Score = 86.7 bits (213), Expect = 1e-14
 Identities = 70/187 (37%), Positives = 94/187 (50%), Gaps = 21/187 (11%)
 Frame = -1

Query: 533 MSVVPSCQIYQASFLDSFQTTSLSRFSGYPLQFARXXXXXXXXXXXXXI--TQNSISSNS 360
           M++VPS Q+Y  +  DSFQ  SLS+F+G  +QF R                T + ISS  
Sbjct: 1   MTLVPSLQLYPTNLFDSFQR-SLSKFNGPHIQFFRYGHGSSTPFNKHTFYATHSIISS-- 57

Query: 359 VPERNPPRNNS----------QKTASNGGLSN--NEWNEIHHSNTIKRPQGYKNSGGFXX 216
            P++NP R ++           K   N   S+  ++WNE H  N +K PQ   +   +  
Sbjct: 58  -PDQNPVRKSNFVGRNRSIYQYKPXRNLCTSSWIDKWNESHKRNRLKPPQAVLD---YQS 113

Query: 215 XXXXXXXXXXXXXXXTMEKIVEKLKRFGYVDDSSEREG---RRVPERSSVEDIFYIEEG- 48
                          TM+KIVEKL +FGYVDDS E +G    RV E+ SVEDIFY+EEG 
Sbjct: 114 SESGNLSGSGNGGGSTMQKIVEKLTKFGYVDDSXEGKGEARERVIEKGSVEDIFYVEEGM 173

Query: 47  ---TRGG 36
              +RGG
Sbjct: 174 LPNSRGG 180


>ref|XP_012457612.1| PREDICTED: LOW QUALITY PROTEIN: chloroplastic group IIA intron
           splicing facilitator CRS1, chloroplastic [Gossypium
           raimondii]
          Length = 859

 Score = 81.6 bits (200), Expect = 4e-13
 Identities = 63/170 (37%), Positives = 80/170 (47%), Gaps = 14/170 (8%)
 Frame = -1

Query: 503 QASFLDSFQTTSLSRFSGYPLQFARXXXXXXXXXXXXXITQN-SISSNSVPERNPPRNNS 327
           + +FLDSFQT SLSRF G PL F R                N +++SNS    NP     
Sbjct: 11  KTTFLDSFQT-SLSRFHGLPLPFFRYSSFHFPFKTLNFCANNHTVTSNSQIHXNP----E 65

Query: 326 QKTASNGGLSNN---EWNEIHHSNTIKRPQG---YKNSGGFXXXXXXXXXXXXXXXXXTM 165
            KT +    S+N    WN+ H     K P+    Y+  G                   TM
Sbjct: 66  SKTKAFPNFSSNWLDNWNKTHKKXGPKPPKTVFYYRKDGNLWSLSYSKSDNNGSGNSNTM 125

Query: 164 EKIVEKLKRFGYVDDSS---EREGRRVPERSSVEDIFYIEE----GTRGG 36
           EKIVEK K+FGY+ + +   E + R V ER S+EDIFY+EE     TRGG
Sbjct: 126 EKIVEKXKKFGYIGEENXQKEEQPRNVIERGSIEDIFYVEERMLPNTRGG 175


>ref|XP_007034977.1| CRM family member 3A isoform 4 [Theobroma cacao]
           gi|508714006|gb|EOY05903.1| CRM family member 3A isoform
           4 [Theobroma cacao]
          Length = 645

 Score = 78.6 bits (192), Expect = 4e-12
 Identities = 63/191 (32%), Positives = 88/191 (46%), Gaps = 22/191 (11%)
 Frame = -1

Query: 533 MSVVPSCQIYQAS-----FLDSFQTTSLSRFSGYPLQFARXXXXXXXXXXXXXITQN-SI 372
           M+++P+ Q + A+     FLDSFQT  LS+F G PL F                  N ++
Sbjct: 1   MTLLPTRQFHPATTTKSTFLDSFQTR-LSKFHGLPLPFCSYDSSNFPLKTSTLYAANYTV 59

Query: 371 SSNSVPERNPPRNNSQKTASNGGLSNN---EWNEIHHSNTIKRPQ---GYKNSGGFXXXX 210
           +SNS+  + P          +    +N    WN+ H     K P+    Y+  G      
Sbjct: 60  TSNSLFHQYPKSKTKAFPTKDPTFRSNWLDSWNKTHKGFGPKPPKTVFNYRKKGDVWSLS 119

Query: 209 XXXXXXXXXXXXXTMEKIVEKLKRFGYVDDSSER------EGRRVPERSSVEDIFYIEEG 48
                        TMEKIVEKLK+FGY+ + +E+      E +RV ER S+EDIFY+EEG
Sbjct: 120 YSQSDNNGRSSSSTMEKIVEKLKKFGYIGEENEQKEKGEEEPKRVIERGSIEDIFYVEEG 179

Query: 47  ----TRGGDRK 27
                RGG  K
Sbjct: 180 MLPNNRGGFSK 190


>ref|XP_007034976.1| CRM family member 3A isoform 3 [Theobroma cacao]
           gi|508714005|gb|EOY05902.1| CRM family member 3A isoform
           3 [Theobroma cacao]
          Length = 856

 Score = 78.6 bits (192), Expect = 4e-12
 Identities = 63/191 (32%), Positives = 88/191 (46%), Gaps = 22/191 (11%)
 Frame = -1

Query: 533 MSVVPSCQIYQAS-----FLDSFQTTSLSRFSGYPLQFARXXXXXXXXXXXXXITQN-SI 372
           M+++P+ Q + A+     FLDSFQT  LS+F G PL F                  N ++
Sbjct: 1   MTLLPTRQFHPATTTKSTFLDSFQTR-LSKFHGLPLPFCSYDSSNFPLKTSTLYAANYTV 59

Query: 371 SSNSVPERNPPRNNSQKTASNGGLSNN---EWNEIHHSNTIKRPQ---GYKNSGGFXXXX 210
           +SNS+  + P          +    +N    WN+ H     K P+    Y+  G      
Sbjct: 60  TSNSLFHQYPKSKTKAFPTKDPTFRSNWLDSWNKTHKGFGPKPPKTVFNYRKKGDVWSLS 119

Query: 209 XXXXXXXXXXXXXTMEKIVEKLKRFGYVDDSSER------EGRRVPERSSVEDIFYIEEG 48
                        TMEKIVEKLK+FGY+ + +E+      E +RV ER S+EDIFY+EEG
Sbjct: 120 YSQSDNNGRSSSSTMEKIVEKLKKFGYIGEENEQKEKGEEEPKRVIERGSIEDIFYVEEG 179

Query: 47  ----TRGGDRK 27
                RGG  K
Sbjct: 180 MLPNNRGGFSK 190


>ref|XP_007034975.1| CRM family member 3A isoform 2 [Theobroma cacao]
           gi|508714004|gb|EOY05901.1| CRM family member 3A isoform
           2 [Theobroma cacao]
          Length = 685

 Score = 78.6 bits (192), Expect = 4e-12
 Identities = 63/191 (32%), Positives = 88/191 (46%), Gaps = 22/191 (11%)
 Frame = -1

Query: 533 MSVVPSCQIYQAS-----FLDSFQTTSLSRFSGYPLQFARXXXXXXXXXXXXXITQN-SI 372
           M+++P+ Q + A+     FLDSFQT  LS+F G PL F                  N ++
Sbjct: 1   MTLLPTRQFHPATTTKSTFLDSFQTR-LSKFHGLPLPFCSYDSSNFPLKTSTLYAANYTV 59

Query: 371 SSNSVPERNPPRNNSQKTASNGGLSNN---EWNEIHHSNTIKRPQ---GYKNSGGFXXXX 210
           +SNS+  + P          +    +N    WN+ H     K P+    Y+  G      
Sbjct: 60  TSNSLFHQYPKSKTKAFPTKDPTFRSNWLDSWNKTHKGFGPKPPKTVFNYRKKGDVWSLS 119

Query: 209 XXXXXXXXXXXXXTMEKIVEKLKRFGYVDDSSER------EGRRVPERSSVEDIFYIEEG 48
                        TMEKIVEKLK+FGY+ + +E+      E +RV ER S+EDIFY+EEG
Sbjct: 120 YSQSDNNGRSSSSTMEKIVEKLKKFGYIGEENEQKEKGEEEPKRVIERGSIEDIFYVEEG 179

Query: 47  ----TRGGDRK 27
                RGG  K
Sbjct: 180 MLPNNRGGFSK 190


>ref|XP_007034974.1| CRM family member 3A isoform 1 [Theobroma cacao]
           gi|508714003|gb|EOY05900.1| CRM family member 3A isoform
           1 [Theobroma cacao]
          Length = 876

 Score = 78.6 bits (192), Expect = 4e-12
 Identities = 63/191 (32%), Positives = 88/191 (46%), Gaps = 22/191 (11%)
 Frame = -1

Query: 533 MSVVPSCQIYQAS-----FLDSFQTTSLSRFSGYPLQFARXXXXXXXXXXXXXITQN-SI 372
           M+++P+ Q + A+     FLDSFQT  LS+F G PL F                  N ++
Sbjct: 1   MTLLPTRQFHPATTTKSTFLDSFQTR-LSKFHGLPLPFCSYDSSNFPLKTSTLYAANYTV 59

Query: 371 SSNSVPERNPPRNNSQKTASNGGLSNN---EWNEIHHSNTIKRPQ---GYKNSGGFXXXX 210
           +SNS+  + P          +    +N    WN+ H     K P+    Y+  G      
Sbjct: 60  TSNSLFHQYPKSKTKAFPTKDPTFRSNWLDSWNKTHKGFGPKPPKTVFNYRKKGDVWSLS 119

Query: 209 XXXXXXXXXXXXXTMEKIVEKLKRFGYVDDSSER------EGRRVPERSSVEDIFYIEEG 48
                        TMEKIVEKLK+FGY+ + +E+      E +RV ER S+EDIFY+EEG
Sbjct: 120 YSQSDNNGRSSSSTMEKIVEKLKKFGYIGEENEQKEKGEEEPKRVIERGSIEDIFYVEEG 179

Query: 47  ----TRGGDRK 27
                RGG  K
Sbjct: 180 MLPNNRGGFSK 190


>emb|CAN79523.1| hypothetical protein VITISV_010525 [Vitis vinifera]
          Length = 902

 Score = 76.6 bits (187), Expect = 1e-11
 Identities = 65/180 (36%), Positives = 88/180 (48%), Gaps = 18/180 (10%)
 Frame = -1

Query: 533 MSVVPSCQIYQA--SFLDSFQTTSLSRFSGYPLQFARXXXXXXXXXXXXXITQNSISSNS 360
           M+++PS Q Y    SFLDSF +T L        QF R             +T+N+I+SNS
Sbjct: 1   MALLPSRQFYPTTTSFLDSFHSTRL--------QFFRYGSSNRFRTHSSYVTRNTIASNS 52

Query: 359 V-PER-------NPP--RNNSQKTASNGGLSNNEWNEIH---HSNTIKRPQGYKNSGGFX 219
             P+R       N P  + +S   +S+GG   ++WN  H   H    +    Y+NS    
Sbjct: 53  TNPQRKSNIVFTNTPVSQYDSGGVSSSGGNWIDKWNGPHQKSHPKEXRPVMNYRNS---- 108

Query: 218 XXXXXXXXXXXXXXXXTMEKIVEKLKRFGYVDD---SSEREGRRVPERSSVEDIFYIEEG 48
                           TMEKIVEKLK+FGY+DD   + E    R+ E+ S+EDIFYIEEG
Sbjct: 109 --ETVSRSDGGSGGGSTMEKIVEKLKKFGYMDDVKETKENVQERIIEKGSIEDIFYIEEG 166


>ref|XP_011030575.1| PREDICTED: chloroplastic group IIA intron splicing facilitator
           CRS1, chloroplastic isoform X2 [Populus euphratica]
          Length = 891

 Score = 75.5 bits (184), Expect = 3e-11
 Identities = 66/188 (35%), Positives = 91/188 (48%), Gaps = 19/188 (10%)
 Frame = -1

Query: 533 MSVVPSCQIYQASFLDSFQTTSLSRFSGYPLQFARXXXXXXXXXXXXXITQNSISSNSVP 354
           M++VPS Q+Y    +DSFQ+ S S+F G PLQF R                +S  + S+ 
Sbjct: 1   MALVPSRQLY----IDSFQS-SFSKFHGTPLQFFRYSSSFPLR-------SHSGYACSIT 48

Query: 353 ERNPPRNNSQ------KTA--SNGGLSNNEWNEIHHSNTIKRPQG---YKNSGGFXXXXX 207
           ++NPPR ++       KT   S G      WN+ +  N  + PQ    Y+++        
Sbjct: 49  DKNPPRKSTAFPTDKPKTLNLSTGSSWFFNWNKPNKQNLPRPPQAVFDYRSNNSISSGSG 108

Query: 206 XXXXXXXXXXXXTMEKIVEKLKRFGYVD----DSSEREGRRVPERSSVEDIFYIEEG--- 48
                        MEKIVEKLK+ GY+D    ++ ER   RV E+ SVEDIFY+EEG   
Sbjct: 109 ST-----------MEKIVEKLKKHGYMDGDVNENKERMQERVIEKGSVEDIFYVEEGMLP 157

Query: 47  -TRGGDRK 27
             RGG  K
Sbjct: 158 NARGGFSK 165