BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver29_contig00038561
         (742 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_010275173.1| PREDICTED: pentatricopeptide repeat-containi...   280   9e-73
ref|XP_007029498.1| Pentatricopeptide repeat-containing protein,...   243   7e-62
ref|XP_007029497.1| Pentatricopeptide repeat-containing protein,...   243   7e-62
ref|XP_007029496.1| Pentatricopeptide repeat-containing protein,...   243   7e-62
ref|XP_007029495.1| Pentatricopeptide repeat-containing protein,...   243   7e-62
ref|XP_010087511.1| hypothetical protein L484_019727 [Morus nota...   242   2e-61
ref|XP_012459106.1| PREDICTED: pentatricopeptide repeat-containi...   242   2e-61
ref|XP_012459104.1| PREDICTED: pentatricopeptide repeat-containi...   242   2e-61
gb|KJB76398.1| hypothetical protein B456_012G086600 [Gossypium r...   242   2e-61
gb|KJB76397.1| hypothetical protein B456_012G086600 [Gossypium r...   242   2e-61
ref|XP_012459103.1| PREDICTED: pentatricopeptide repeat-containi...   242   2e-61
ref|XP_012459102.1| PREDICTED: pentatricopeptide repeat-containi...   242   2e-61
gb|KHG03831.1| hypothetical protein F383_26634 [Gossypium arboreum]   242   2e-61
gb|KHG03829.1| hypothetical protein F383_26634 [Gossypium arboreum]   242   2e-61
gb|KHG03828.1| hypothetical protein F383_26634 [Gossypium arboreum]   242   2e-61
ref|XP_002519998.1| pentatricopeptide repeat-containing protein,...   238   4e-60
gb|KDO42685.1| hypothetical protein CISIN_1g009556mg [Citrus sin...   237   5e-60
ref|XP_006491815.1| PREDICTED: pentatricopeptide repeat-containi...   237   5e-60
ref|XP_006428506.1| hypothetical protein CICLE_v10011504mg [Citr...   236   2e-59
ref|XP_006351327.1| PREDICTED: pentatricopeptide repeat-containi...   234   5e-59

>ref|XP_010275173.1| PREDICTED: pentatricopeptide repeat-containing protein At5g42310,
           mitochondrial-like [Nelumbo nucifera]
          Length = 536

 Score =  280 bits (715), Expect = 9e-73
 Identities = 142/244 (58%), Positives = 180/244 (73%), Gaps = 4/244 (1%)
 Frame = +2

Query: 23  QKAAKTLNLTILQHSCVT----EEISRENYNILIRKHSREGNVDKCMELLAQMESLGFHP 190
           ++   T+N  I  +S ++    EEIS E YNI IR + REG++DK M LLAQME+LG  P
Sbjct: 61  RRCPSTINNLIFNNSNISCSNKEEISCEIYNISIRNYCREGDIDKSMALLAQMEALGIRP 120

Query: 191 NATSYNILIESLGNVGRTLEADSIFQEMKKSGFEPKVMADNVXXXXXXXXXXXXXAYNVL 370
           N  SY  +IE+LG+VGRTLEAD+IFQEM+ SGFEP+V A NV             A  VL
Sbjct: 121 NLISYTCVIEALGSVGRTLEADAIFQEMRWSGFEPRVKAYNVLLKGFLRKGLLGLADRVL 180

Query: 371 DEMYQTKIAKNQETFELLLEYYVGARRLEDTWFVIAEMKAEGFSLNSHIYSKVIGLYRDN 550
            EM    I +NQ+T+E+LL+YYV A RL+DTW VI EMK EG  LNS++YSK+I LYRDN
Sbjct: 181 LEMGDLDIGRNQDTYEILLDYYVHAGRLDDTWSVINEMKREGLKLNSYVYSKIINLYRDN 240

Query: 551 GLWRKALELMREMTETKIPLDRRVYNSIIDTFGKYGELNEAVTMFRNMQREGIKPDVVTY 730
           G+W+KA++++REM E  +PLDRR+YNSIIDTFGKYGEL EAV  F NMQ+EGI+PD++T+
Sbjct: 241 GMWQKAMDVLREMREMGVPLDRRIYNSIIDTFGKYGELEEAVGAFENMQKEGIRPDIMTW 300

Query: 731 NSLI 742
           NSLI
Sbjct: 301 NSLI 304



 Score = 79.7 bits (195), Expect = 2e-12
 Identities = 63/266 (23%), Positives = 110/266 (41%), Gaps = 42/266 (15%)
 Frame = +2

Query: 71   VTEEISREN-------YNILIRKHSREGNVDKCMELLAQMESLGFHPNATSYNILIESLG 229
            V  E+ RE        Y+ +I  +   G   K M++L +M  +G   +   YN +I++ G
Sbjct: 214  VINEMKREGLKLNSYVYSKIINLYRDNGMWQKAMDVLREMREMGVPLDRRIYNSIIDTFG 273

Query: 230  NVGRTLEADSIFQEMKKSGFEPKVMADNVXXXXXXXXXXXXXAYNVLDEMYQ-------- 385
              G   EA   F+ M+K G  P +M  N              A   L +M +        
Sbjct: 274  KYGELEEAVGAFENMQKEGIRPDIMTWNSLIRWHCKAGEVGGALEFLTKMQEQGLYPDPK 333

Query: 386  ---------------TKIAKNQET------------FELLLEYYVGARRLEDTWFVIAEM 484
                             I KN E             + +L + Y    R +D    +  +
Sbjct: 334  IFVNIISRLAEQGKWNAIKKNFENMKHRGLRKSGVIYAVLADIYGQYGRFQDADECLLAL 393

Query: 485  KAEGFSLNSHIYSKVIGLYRDNGLWRKALELMREMTETKIPLDRRVYNSIIDTFGKYGEL 664
            K+EG   +++++  +   Y   GL  + + +++ M    I  +  + N +I+ FG  G  
Sbjct: 394  KSEGLKPSANMFCALANAYAQQGLCEQTVRILQLMEADGIEPNLIMLNMLINAFGVAGRH 453

Query: 665  NEAVTMFRNMQREGIKPDVVTYNSLI 742
             EA+++F +M+  GI PDVVTY++L+
Sbjct: 454  LEALSIFYHMKDSGINPDVVTYSTLM 479


>ref|XP_007029498.1| Pentatricopeptide repeat-containing protein, putative isoform 4
           [Theobroma cacao] gi|508718103|gb|EOY10000.1|
           Pentatricopeptide repeat-containing protein, putative
           isoform 4 [Theobroma cacao]
          Length = 477

 Score =  243 bits (621), Expect = 7e-62
 Identities = 119/222 (53%), Positives = 161/222 (72%)
 Frame = +2

Query: 77  EEISRENYNILIRKHSREGNVDKCMELLAQMESLGFHPNATSYNILIESLGNVGRTLEAD 256
           EE++ E +N  I+ + + G+VD  M+L+A ME++GFHPN+ SY  LIESLG+VGRTLEAD
Sbjct: 72  EELTSELHNQAIQGYCKIGDVDNAMKLVAHMEAMGFHPNSISYGFLIESLGSVGRTLEAD 131

Query: 257 SIFQEMKKSGFEPKVMADNVXXXXXXXXXXXXXAYNVLDEMYQTKIAKNQETFELLLEYY 436
           ++FQEM   G +P++   NV             A  VL  M +  + KNQET+E+LL+YY
Sbjct: 132 ALFQEMICLGLKPRIRLFNVLLKGFLRKGLLRLAVKVLVVMDERGVCKNQETYEILLDYY 191

Query: 437 VGARRLEDTWFVIAEMKAEGFSLNSHIYSKVIGLYRDNGLWRKALELMREMTETKIPLDR 616
           V A RLEDTW V+ EMK +G  LNS +YSK+I LYRDNG+WRKA+ ++ E+ E  I LDR
Sbjct: 192 VNAGRLEDTWMVVNEMKEKGIHLNSFVYSKIICLYRDNGMWRKAIGIVEEIREKGISLDR 251

Query: 617 RVYNSIIDTFGKYGELNEAVTMFRNMQREGIKPDVVTYNSLI 742
           ++YNSIIDTFGKYGEL+EA+ +F  M++E I+PD+ T+NSLI
Sbjct: 252 QIYNSIIDTFGKYGELSEALEVFEKMKQESIRPDITTWNSLI 293



 Score = 60.5 bits (145), Expect = 1e-06
 Identities = 45/213 (21%), Positives = 91/213 (42%), Gaps = 3/213 (1%)
 Frame = +2

Query: 86  SRENYNILIRKHSREGNVDKCMELLAQMESLGFHPNATSYNILIESLGNVGRTLEADSIF 265
           ++E Y IL+  +   G ++    ++ +M+  G H N+  Y+ +I    + G   +A  I 
Sbjct: 180 NQETYEILLDYYVNAGRLEDTWMVVNEMKEKGIHLNSFVYSKIICLYRDNGMWRKAIGIV 239

Query: 266 QEMKKSGFEPKVMADNVXXXXXXXXXXXXXAYNVLDEMYQTKIAKNQETFELLLEYYVGA 445
           +E+++ G        N              A  V ++M Q  I  +  T+  L++++  A
Sbjct: 240 EEIREKGISLDRQIYNSIIDTFGKYGELSEALEVFEKMKQESIRPDITTWNSLIQWHCKA 299

Query: 446 RRLEDTWFVIAEMKAEGFSLNSHIYSKVIGLYRDNGLW---RKALELMREMTETKIPLDR 616
             L     +  EM+ +G   +  I+  +I    + G W   +K  E M+      +    
Sbjct: 300 GDLTKALELFTEMQEQGLYPDPKIFMSLISRLGELGKWDIIKKNFENMKSRGHQDVGA-- 357

Query: 617 RVYNSIIDTFGKYGELNEAVTMFRNMQREGIKP 715
            +Y  ++D +G+YG   +A      ++ EG+ P
Sbjct: 358 -IYAILVDIYGQYGRFQDAEVCISALKSEGLLP 389


>ref|XP_007029497.1| Pentatricopeptide repeat-containing protein, putative isoform 3
           [Theobroma cacao] gi|508718102|gb|EOY09999.1|
           Pentatricopeptide repeat-containing protein, putative
           isoform 3 [Theobroma cacao]
          Length = 489

 Score =  243 bits (621), Expect = 7e-62
 Identities = 119/222 (53%), Positives = 161/222 (72%)
 Frame = +2

Query: 77  EEISRENYNILIRKHSREGNVDKCMELLAQMESLGFHPNATSYNILIESLGNVGRTLEAD 256
           EE++ E +N  I+ + + G+VD  M+L+A ME++GFHPN+ SY  LIESLG+VGRTLEAD
Sbjct: 72  EELTSELHNQAIQGYCKIGDVDNAMKLVAHMEAMGFHPNSISYGFLIESLGSVGRTLEAD 131

Query: 257 SIFQEMKKSGFEPKVMADNVXXXXXXXXXXXXXAYNVLDEMYQTKIAKNQETFELLLEYY 436
           ++FQEM   G +P++   NV             A  VL  M +  + KNQET+E+LL+YY
Sbjct: 132 ALFQEMICLGLKPRIRLFNVLLKGFLRKGLLRLAVKVLVVMDERGVCKNQETYEILLDYY 191

Query: 437 VGARRLEDTWFVIAEMKAEGFSLNSHIYSKVIGLYRDNGLWRKALELMREMTETKIPLDR 616
           V A RLEDTW V+ EMK +G  LNS +YSK+I LYRDNG+WRKA+ ++ E+ E  I LDR
Sbjct: 192 VNAGRLEDTWMVVNEMKEKGIHLNSFVYSKIICLYRDNGMWRKAIGIVEEIREKGISLDR 251

Query: 617 RVYNSIIDTFGKYGELNEAVTMFRNMQREGIKPDVVTYNSLI 742
           ++YNSIIDTFGKYGEL+EA+ +F  M++E I+PD+ T+NSLI
Sbjct: 252 QIYNSIIDTFGKYGELSEALEVFEKMKQESIRPDITTWNSLI 293



 Score = 60.5 bits (145), Expect = 1e-06
 Identities = 45/213 (21%), Positives = 91/213 (42%), Gaps = 3/213 (1%)
 Frame = +2

Query: 86  SRENYNILIRKHSREGNVDKCMELLAQMESLGFHPNATSYNILIESLGNVGRTLEADSIF 265
           ++E Y IL+  +   G ++    ++ +M+  G H N+  Y+ +I    + G   +A  I 
Sbjct: 180 NQETYEILLDYYVNAGRLEDTWMVVNEMKEKGIHLNSFVYSKIICLYRDNGMWRKAIGIV 239

Query: 266 QEMKKSGFEPKVMADNVXXXXXXXXXXXXXAYNVLDEMYQTKIAKNQETFELLLEYYVGA 445
           +E+++ G        N              A  V ++M Q  I  +  T+  L++++  A
Sbjct: 240 EEIREKGISLDRQIYNSIIDTFGKYGELSEALEVFEKMKQESIRPDITTWNSLIQWHCKA 299

Query: 446 RRLEDTWFVIAEMKAEGFSLNSHIYSKVIGLYRDNGLW---RKALELMREMTETKIPLDR 616
             L     +  EM+ +G   +  I+  +I    + G W   +K  E M+      +    
Sbjct: 300 GDLTKALELFTEMQEQGLYPDPKIFMSLISRLGELGKWDIIKKNFENMKSRGHQDVGA-- 357

Query: 617 RVYNSIIDTFGKYGELNEAVTMFRNMQREGIKP 715
            +Y  ++D +G+YG   +A      ++ EG+ P
Sbjct: 358 -IYAILVDIYGQYGRFQDAEVCISALKSEGLLP 389


>ref|XP_007029496.1| Pentatricopeptide repeat-containing protein, putative isoform 2
           [Theobroma cacao] gi|508718101|gb|EOY09998.1|
           Pentatricopeptide repeat-containing protein, putative
           isoform 2 [Theobroma cacao]
          Length = 487

 Score =  243 bits (621), Expect = 7e-62
 Identities = 119/222 (53%), Positives = 161/222 (72%)
 Frame = +2

Query: 77  EEISRENYNILIRKHSREGNVDKCMELLAQMESLGFHPNATSYNILIESLGNVGRTLEAD 256
           EE++ E +N  I+ + + G+VD  M+L+A ME++GFHPN+ SY  LIESLG+VGRTLEAD
Sbjct: 72  EELTSELHNQAIQGYCKIGDVDNAMKLVAHMEAMGFHPNSISYGFLIESLGSVGRTLEAD 131

Query: 257 SIFQEMKKSGFEPKVMADNVXXXXXXXXXXXXXAYNVLDEMYQTKIAKNQETFELLLEYY 436
           ++FQEM   G +P++   NV             A  VL  M +  + KNQET+E+LL+YY
Sbjct: 132 ALFQEMICLGLKPRIRLFNVLLKGFLRKGLLRLAVKVLVVMDERGVCKNQETYEILLDYY 191

Query: 437 VGARRLEDTWFVIAEMKAEGFSLNSHIYSKVIGLYRDNGLWRKALELMREMTETKIPLDR 616
           V A RLEDTW V+ EMK +G  LNS +YSK+I LYRDNG+WRKA+ ++ E+ E  I LDR
Sbjct: 192 VNAGRLEDTWMVVNEMKEKGIHLNSFVYSKIICLYRDNGMWRKAIGIVEEIREKGISLDR 251

Query: 617 RVYNSIIDTFGKYGELNEAVTMFRNMQREGIKPDVVTYNSLI 742
           ++YNSIIDTFGKYGEL+EA+ +F  M++E I+PD+ T+NSLI
Sbjct: 252 QIYNSIIDTFGKYGELSEALEVFEKMKQESIRPDITTWNSLI 293



 Score = 77.8 bits (190), Expect = 7e-12
 Identities = 47/224 (20%), Positives = 109/224 (48%), Gaps = 4/224 (1%)
 Frame = +2

Query: 83  ISRENYNILIRKHSREGNVDKCMELLAQMESLGFHPNATSYNILIESLGNVGRTLEADSI 262
           + R+ YN +I    + G + + +E+  +M+     P+ T++N LI+     G   +A  +
Sbjct: 249 LDRQIYNSIIDTFGKYGELSEALEVFEKMKQESIRPDITTWNSLIQWHCKAGDLTKALEL 308

Query: 263 FQEMKKSGFEPKVMADNVXXXXXXXXXXXXXAYNVLDEMYQTKIAKNQET----FELLLE 430
           F EM++ G  P    D                ++++ + ++   ++  +     + +L++
Sbjct: 309 FTEMQEQGLYP----DPKIFMSLISRLGELGKWDIIKKNFENMKSRGHQDVGAIYAILVD 364

Query: 431 YYVGARRLEDTWFVIAEMKAEGFSLNSHIYSKVIGLYRDNGLWRKALELMREMTETKIPL 610
            Y    R +D    I+ +K+EG   ++ ++  +   Y   G   + +++++ M    I  
Sbjct: 365 IYGQYGRFQDAEVCISALKSEGLLPSASMFCVLANAYAQQGFCEQTVKVLQIMEAEGIEP 424

Query: 611 DRRVYNSIIDTFGKYGELNEAVTMFRNMQREGIKPDVVTYNSLI 742
           +  + N +I+ FG  G   EA++++ +++  GI PDV+TY++L+
Sbjct: 425 NIVMLNVLINAFGIAGRHEEALSIYHHIRDSGISPDVITYSTLM 468


>ref|XP_007029495.1| Pentatricopeptide repeat-containing protein, putative isoform 1
           [Theobroma cacao] gi|508718100|gb|EOY09997.1|
           Pentatricopeptide repeat-containing protein, putative
           isoform 1 [Theobroma cacao]
          Length = 513

 Score =  243 bits (621), Expect = 7e-62
 Identities = 119/222 (53%), Positives = 161/222 (72%)
 Frame = +2

Query: 77  EEISRENYNILIRKHSREGNVDKCMELLAQMESLGFHPNATSYNILIESLGNVGRTLEAD 256
           EE++ E +N  I+ + + G+VD  M+L+A ME++GFHPN+ SY  LIESLG+VGRTLEAD
Sbjct: 72  EELTSELHNQAIQGYCKIGDVDNAMKLVAHMEAMGFHPNSISYGFLIESLGSVGRTLEAD 131

Query: 257 SIFQEMKKSGFEPKVMADNVXXXXXXXXXXXXXAYNVLDEMYQTKIAKNQETFELLLEYY 436
           ++FQEM   G +P++   NV             A  VL  M +  + KNQET+E+LL+YY
Sbjct: 132 ALFQEMICLGLKPRIRLFNVLLKGFLRKGLLRLAVKVLVVMDERGVCKNQETYEILLDYY 191

Query: 437 VGARRLEDTWFVIAEMKAEGFSLNSHIYSKVIGLYRDNGLWRKALELMREMTETKIPLDR 616
           V A RLEDTW V+ EMK +G  LNS +YSK+I LYRDNG+WRKA+ ++ E+ E  I LDR
Sbjct: 192 VNAGRLEDTWMVVNEMKEKGIHLNSFVYSKIICLYRDNGMWRKAIGIVEEIREKGISLDR 251

Query: 617 RVYNSIIDTFGKYGELNEAVTMFRNMQREGIKPDVVTYNSLI 742
           ++YNSIIDTFGKYGEL+EA+ +F  M++E I+PD+ T+NSLI
Sbjct: 252 QIYNSIIDTFGKYGELSEALEVFEKMKQESIRPDITTWNSLI 293



 Score = 77.8 bits (190), Expect = 7e-12
 Identities = 47/224 (20%), Positives = 109/224 (48%), Gaps = 4/224 (1%)
 Frame = +2

Query: 83  ISRENYNILIRKHSREGNVDKCMELLAQMESLGFHPNATSYNILIESLGNVGRTLEADSI 262
           + R+ YN +I    + G + + +E+  +M+     P+ T++N LI+     G   +A  +
Sbjct: 249 LDRQIYNSIIDTFGKYGELSEALEVFEKMKQESIRPDITTWNSLIQWHCKAGDLTKALEL 308

Query: 263 FQEMKKSGFEPKVMADNVXXXXXXXXXXXXXAYNVLDEMYQTKIAKNQET----FELLLE 430
           F EM++ G  P    D                ++++ + ++   ++  +     + +L++
Sbjct: 309 FTEMQEQGLYP----DPKIFMSLISRLGELGKWDIIKKNFENMKSRGHQDVGAIYAILVD 364

Query: 431 YYVGARRLEDTWFVIAEMKAEGFSLNSHIYSKVIGLYRDNGLWRKALELMREMTETKIPL 610
            Y    R +D    I+ +K+EG   ++ ++  +   Y   G   + +++++ M    I  
Sbjct: 365 IYGQYGRFQDAEVCISALKSEGLLPSASMFCVLANAYAQQGFCEQTVKVLQIMEAEGIEP 424

Query: 611 DRRVYNSIIDTFGKYGELNEAVTMFRNMQREGIKPDVVTYNSLI 742
           +  + N +I+ FG  G   EA++++ +++  GI PDV+TY++L+
Sbjct: 425 NIVMLNVLINAFGIAGRHEEALSIYHHIRDSGISPDVITYSTLM 468


>ref|XP_010087511.1| hypothetical protein L484_019727 [Morus notabilis]
           gi|587838488|gb|EXB29192.1| hypothetical protein
           L484_019727 [Morus notabilis]
          Length = 506

 Score =  242 bits (617), Expect = 2e-61
 Identities = 125/259 (48%), Positives = 174/259 (67%), Gaps = 13/259 (5%)
 Frame = +2

Query: 5   CKHRRFQK---AAKTLNLTILQHSCVT----------EEISRENYNILIRKHSREGNVDK 145
           C HR  +    A+ T N T+ + S  +          EE+S E YN LIR++ R GNVD 
Sbjct: 29  CLHRHAKPKFVASLTQNKTLKEPSFTSSSSSQSFRAGEELSGETYNHLIREYCRAGNVDG 88

Query: 146 CMELLAQMESLGFHPNATSYNILIESLGNVGRTLEADSIFQEMKKSGFEPKVMADNVXXX 325
            M LLAQ+  LGFHP+  +Y  LIE+LG+VGRTLEA+ +FQEM+  GF+P +   NV   
Sbjct: 89  AMTLLAQLNGLGFHPSFATYACLIEALGSVGRTLEAECLFQEMRFFGFKPGIKLCNVLLK 148

Query: 326 XXXXXXXXXXAYNVLDEMYQTKIAKNQETFELLLEYYVGARRLEDTWFVIAEMKAEGFSL 505
                        VL+ M +  + KN+E++E+LL+YYV A RLEDTW+VI EM+++GF L
Sbjct: 149 GCLKKGLLEVGIRVLELMDEVGVEKNRESYEILLDYYVNAGRLEDTWWVINEMRSKGFRL 208

Query: 506 NSHIYSKVIGLYRDNGLWRKALELMREMTETKIPLDRRVYNSIIDTFGKYGELNEAVTMF 685
           +S +Y KVIGLYRDNG+W+KA++++ E+ E  +   R+VYNSIIDTFGKYGEL++A+ +F
Sbjct: 209 SSFVYGKVIGLYRDNGMWKKAMDVVEEIREMGLASVRKVYNSIIDTFGKYGELDDALQVF 268

Query: 686 RNMQREGIKPDVVTYNSLI 742
             M+ E +KPD+ T+NSLI
Sbjct: 269 EKMRGENVKPDITTWNSLI 287



 Score = 71.6 bits (174), Expect = 5e-10
 Identities = 51/221 (23%), Positives = 102/221 (46%), Gaps = 3/221 (1%)
 Frame = +2

Query: 89  RENYNILIRKHSREGNVDKCMELLAQMESLGFHPNATSYNILIE---SLGNVGRTLEADS 259
           R+ YN +I    + G +D  +++  +M      P+ T++N LI      G+VG+ LE   
Sbjct: 245 RKVYNSIIDTFGKYGELDDALQVFEKMRGENVKPDITTWNSLILWHCRAGDVGKALE--- 301

Query: 260 IFQEMKKSGFEPKVMADNVXXXXXXXXXXXXXAYNVLDEMYQTKIAKNQETFELLLEYYV 439
           +F EM++ G  P                       + + M      K+   + +L++ Y 
Sbjct: 302 LFAEMQEEGLYPDPKIFITVISRLGEQGKWDMIKKMFENMNCRGYKKSGVIYGVLVDIYG 361

Query: 440 GARRLEDTWFVIAEMKAEGFSLNSHIYSKVIGLYRDNGLWRKALELMREMTETKIPLDRR 619
              + +     I+ +K EG  +++ ++  +   Y   GL  + L++++ M    I  +  
Sbjct: 362 QYGKFQGAEECISALKWEGLPISASVFCVLANAYAQQGLCDQTLKVLQLMEAEGIEPNVV 421

Query: 620 VYNSIIDTFGKYGELNEAVTMFRNMQREGIKPDVVTYNSLI 742
           + N +I+ FG  G   EA++++ +++  G  PDVVTY +L+
Sbjct: 422 MLNVLINAFGIAGRHLEALSIYHHIKEIGFSPDVVTYTTLM 462


>ref|XP_012459106.1| PREDICTED: pentatricopeptide repeat-containing protein At5g42310,
           mitochondrial-like isoform X4 [Gossypium raimondii]
          Length = 485

 Score =  242 bits (617), Expect = 2e-61
 Identities = 118/222 (53%), Positives = 158/222 (71%)
 Frame = +2

Query: 77  EEISRENYNILIRKHSREGNVDKCMELLAQMESLGFHPNATSYNILIESLGNVGRTLEAD 256
           EE+S E +N  I+++ + G+VD  M+L+AQ+E++GFHPN+ SY  LI+SLG+VGRTLEAD
Sbjct: 41  EELSTELHNKTIQEYCKIGDVDNAMKLVAQLEAMGFHPNSISYGFLIDSLGSVGRTLEAD 100

Query: 257 SIFQEMKKSGFEPKVMADNVXXXXXXXXXXXXXAYNVLDEMYQTKIAKNQETFELLLEYY 436
            +FQEM   GF+P++   N              A   L EM +  + KNQET+E+LL+YY
Sbjct: 101 VLFQEMMYLGFKPRIRLFNALLKGFLKKGLLGLAVKFLVEMDRMGVCKNQETYEILLDYY 160

Query: 437 VGARRLEDTWFVIAEMKAEGFSLNSHIYSKVIGLYRDNGLWRKALELMREMTETKIPLDR 616
           V A RLEDTW V+ EMK  G  L+S +Y KVI LYRDNG+W+KA+ L+ E+ E  I LDR
Sbjct: 161 VSAGRLEDTWMVVNEMKTNGIQLSSFVYGKVIRLYRDNGMWKKAIGLVEEIREKGISLDR 220

Query: 617 RVYNSIIDTFGKYGELNEAVTMFRNMQREGIKPDVVTYNSLI 742
           ++YNSIIDTFGKYGEL EA+ +F  M++E I PD+ T+NSLI
Sbjct: 221 QIYNSIIDTFGKYGELGEALEVFEKMKQESIVPDITTWNSLI 262



 Score = 83.2 bits (204), Expect = 2e-13
 Identities = 51/226 (22%), Positives = 115/226 (50%), Gaps = 6/226 (2%)
 Frame = +2

Query: 83  ISRENYNILIRKHSREGNVDKCMELLAQMESLGFHPNATSYNILIESLGNVGRTLEADSI 262
           + R+ YN +I    + G + + +E+  +M+     P+ T++N LI      G   +A  +
Sbjct: 218 LDRQIYNSIIDTFGKYGELGEALEVFEKMKQESIVPDITTWNSLIRWHCKAGDLTKALQL 277

Query: 263 FQEMKKSGF--EPKVMADNVXXXXXXXXXXXXXAYNVLDEMYQTKIAKNQET----FELL 424
           F EM++ G   +PK++   +              ++V+ + ++    + ++     + +L
Sbjct: 278 FTEMQEQGLYPDPKILMSLISRLGELGK------WDVIKKNFENMTCRGRQEVGAIYAML 331

Query: 425 LEYYVGARRLEDTWFVIAEMKAEGFSLNSHIYSKVIGLYRDNGLWRKALELMREMTETKI 604
           ++ Y    R +D    I+ +K+EGF  ++ ++  +   Y   G   + +++++ M    I
Sbjct: 332 VDIYGQYGRFQDAEDFISALKSEGFLPSASMFCVLANAYAQQGFCEQTVKVLQLMEAEGI 391

Query: 605 PLDRRVYNSIIDTFGKYGELNEAVTMFRNMQREGIKPDVVTYNSLI 742
            L+  + N +I+ FG  G   EA++++++++  GI PDVVTY++L+
Sbjct: 392 ELNIIMLNVLINAFGIAGRHEEALSIYQHIKESGISPDVVTYSTLM 437


>ref|XP_012459104.1| PREDICTED: pentatricopeptide repeat-containing protein At5g42310,
           mitochondrial-like isoform X3 [Gossypium raimondii]
           gi|823252980|ref|XP_012459105.1| PREDICTED:
           pentatricopeptide repeat-containing protein At5g42310,
           mitochondrial-like isoform X3 [Gossypium raimondii]
          Length = 490

 Score =  242 bits (617), Expect = 2e-61
 Identities = 118/222 (53%), Positives = 158/222 (71%)
 Frame = +2

Query: 77  EEISRENYNILIRKHSREGNVDKCMELLAQMESLGFHPNATSYNILIESLGNVGRTLEAD 256
           EE+S E +N  I+++ + G+VD  M+L+AQ+E++GFHPN+ SY  LI+SLG+VGRTLEAD
Sbjct: 46  EELSTELHNKTIQEYCKIGDVDNAMKLVAQLEAMGFHPNSISYGFLIDSLGSVGRTLEAD 105

Query: 257 SIFQEMKKSGFEPKVMADNVXXXXXXXXXXXXXAYNVLDEMYQTKIAKNQETFELLLEYY 436
            +FQEM   GF+P++   N              A   L EM +  + KNQET+E+LL+YY
Sbjct: 106 VLFQEMMYLGFKPRIRLFNALLKGFLKKGLLGLAVKFLVEMDRMGVCKNQETYEILLDYY 165

Query: 437 VGARRLEDTWFVIAEMKAEGFSLNSHIYSKVIGLYRDNGLWRKALELMREMTETKIPLDR 616
           V A RLEDTW V+ EMK  G  L+S +Y KVI LYRDNG+W+KA+ L+ E+ E  I LDR
Sbjct: 166 VSAGRLEDTWMVVNEMKTNGIQLSSFVYGKVIRLYRDNGMWKKAIGLVEEIREKGISLDR 225

Query: 617 RVYNSIIDTFGKYGELNEAVTMFRNMQREGIKPDVVTYNSLI 742
           ++YNSIIDTFGKYGEL EA+ +F  M++E I PD+ T+NSLI
Sbjct: 226 QIYNSIIDTFGKYGELGEALEVFEKMKQESIVPDITTWNSLI 267



 Score = 83.2 bits (204), Expect = 2e-13
 Identities = 51/226 (22%), Positives = 115/226 (50%), Gaps = 6/226 (2%)
 Frame = +2

Query: 83  ISRENYNILIRKHSREGNVDKCMELLAQMESLGFHPNATSYNILIESLGNVGRTLEADSI 262
           + R+ YN +I    + G + + +E+  +M+     P+ T++N LI      G   +A  +
Sbjct: 223 LDRQIYNSIIDTFGKYGELGEALEVFEKMKQESIVPDITTWNSLIRWHCKAGDLTKALQL 282

Query: 263 FQEMKKSGF--EPKVMADNVXXXXXXXXXXXXXAYNVLDEMYQTKIAKNQET----FELL 424
           F EM++ G   +PK++   +              ++V+ + ++    + ++     + +L
Sbjct: 283 FTEMQEQGLYPDPKILMSLISRLGELGK------WDVIKKNFENMTCRGRQEVGAIYAML 336

Query: 425 LEYYVGARRLEDTWFVIAEMKAEGFSLNSHIYSKVIGLYRDNGLWRKALELMREMTETKI 604
           ++ Y    R +D    I+ +K+EGF  ++ ++  +   Y   G   + +++++ M    I
Sbjct: 337 VDIYGQYGRFQDAEDFISALKSEGFLPSASMFCVLANAYAQQGFCEQTVKVLQLMEAEGI 396

Query: 605 PLDRRVYNSIIDTFGKYGELNEAVTMFRNMQREGIKPDVVTYNSLI 742
            L+  + N +I+ FG  G   EA++++++++  GI PDVVTY++L+
Sbjct: 397 ELNIIMLNVLINAFGIAGRHEEALSIYQHIKESGISPDVVTYSTLM 442


>gb|KJB76398.1| hypothetical protein B456_012G086600 [Gossypium raimondii]
          Length = 487

 Score =  242 bits (617), Expect = 2e-61
 Identities = 118/222 (53%), Positives = 158/222 (71%)
 Frame = +2

Query: 77  EEISRENYNILIRKHSREGNVDKCMELLAQMESLGFHPNATSYNILIESLGNVGRTLEAD 256
           EE+S E +N  I+++ + G+VD  M+L+AQ+E++GFHPN+ SY  LI+SLG+VGRTLEAD
Sbjct: 46  EELSTELHNKTIQEYCKIGDVDNAMKLVAQLEAMGFHPNSISYGFLIDSLGSVGRTLEAD 105

Query: 257 SIFQEMKKSGFEPKVMADNVXXXXXXXXXXXXXAYNVLDEMYQTKIAKNQETFELLLEYY 436
            +FQEM   GF+P++   N              A   L EM +  + KNQET+E+LL+YY
Sbjct: 106 VLFQEMMYLGFKPRIRLFNALLKGFLKKGLLGLAVKFLVEMDRMGVCKNQETYEILLDYY 165

Query: 437 VGARRLEDTWFVIAEMKAEGFSLNSHIYSKVIGLYRDNGLWRKALELMREMTETKIPLDR 616
           V A RLEDTW V+ EMK  G  L+S +Y KVI LYRDNG+W+KA+ L+ E+ E  I LDR
Sbjct: 166 VSAGRLEDTWMVVNEMKTNGIQLSSFVYGKVIRLYRDNGMWKKAIGLVEEIREKGISLDR 225

Query: 617 RVYNSIIDTFGKYGELNEAVTMFRNMQREGIKPDVVTYNSLI 742
           ++YNSIIDTFGKYGEL EA+ +F  M++E I PD+ T+NSLI
Sbjct: 226 QIYNSIIDTFGKYGELGEALEVFEKMKQESIVPDITTWNSLI 267



 Score = 83.2 bits (204), Expect = 2e-13
 Identities = 51/226 (22%), Positives = 115/226 (50%), Gaps = 6/226 (2%)
 Frame = +2

Query: 83  ISRENYNILIRKHSREGNVDKCMELLAQMESLGFHPNATSYNILIESLGNVGRTLEADSI 262
           + R+ YN +I    + G + + +E+  +M+     P+ T++N LI      G   +A  +
Sbjct: 223 LDRQIYNSIIDTFGKYGELGEALEVFEKMKQESIVPDITTWNSLIRWHCKAGDLTKALQL 282

Query: 263 FQEMKKSGF--EPKVMADNVXXXXXXXXXXXXXAYNVLDEMYQTKIAKNQET----FELL 424
           F EM++ G   +PK++   +              ++V+ + ++    + ++     + +L
Sbjct: 283 FTEMQEQGLYPDPKILMSLISRLGELGK------WDVIKKNFENMTCRGRQEVGAIYAML 336

Query: 425 LEYYVGARRLEDTWFVIAEMKAEGFSLNSHIYSKVIGLYRDNGLWRKALELMREMTETKI 604
           ++ Y    R +D    I+ +K+EGF  ++ ++  +   Y   G   + +++++ M    I
Sbjct: 337 VDIYGQYGRFQDAEDFISALKSEGFLPSASMFCVLANAYAQQGFCEQTVKVLQLMEAEGI 396

Query: 605 PLDRRVYNSIIDTFGKYGELNEAVTMFRNMQREGIKPDVVTYNSLI 742
            L+  + N +I+ FG  G   EA++++++++  GI PDVVTY++L+
Sbjct: 397 ELNIIMLNVLINAFGIAGRHEEALSIYQHIKESGISPDVVTYSTLM 442


>gb|KJB76397.1| hypothetical protein B456_012G086600 [Gossypium raimondii]
          Length = 482

 Score =  242 bits (617), Expect = 2e-61
 Identities = 118/222 (53%), Positives = 158/222 (71%)
 Frame = +2

Query: 77  EEISRENYNILIRKHSREGNVDKCMELLAQMESLGFHPNATSYNILIESLGNVGRTLEAD 256
           EE+S E +N  I+++ + G+VD  M+L+AQ+E++GFHPN+ SY  LI+SLG+VGRTLEAD
Sbjct: 41  EELSTELHNKTIQEYCKIGDVDNAMKLVAQLEAMGFHPNSISYGFLIDSLGSVGRTLEAD 100

Query: 257 SIFQEMKKSGFEPKVMADNVXXXXXXXXXXXXXAYNVLDEMYQTKIAKNQETFELLLEYY 436
            +FQEM   GF+P++   N              A   L EM +  + KNQET+E+LL+YY
Sbjct: 101 VLFQEMMYLGFKPRIRLFNALLKGFLKKGLLGLAVKFLVEMDRMGVCKNQETYEILLDYY 160

Query: 437 VGARRLEDTWFVIAEMKAEGFSLNSHIYSKVIGLYRDNGLWRKALELMREMTETKIPLDR 616
           V A RLEDTW V+ EMK  G  L+S +Y KVI LYRDNG+W+KA+ L+ E+ E  I LDR
Sbjct: 161 VSAGRLEDTWMVVNEMKTNGIQLSSFVYGKVIRLYRDNGMWKKAIGLVEEIREKGISLDR 220

Query: 617 RVYNSIIDTFGKYGELNEAVTMFRNMQREGIKPDVVTYNSLI 742
           ++YNSIIDTFGKYGEL EA+ +F  M++E I PD+ T+NSLI
Sbjct: 221 QIYNSIIDTFGKYGELGEALEVFEKMKQESIVPDITTWNSLI 262



 Score = 83.2 bits (204), Expect = 2e-13
 Identities = 51/226 (22%), Positives = 115/226 (50%), Gaps = 6/226 (2%)
 Frame = +2

Query: 83  ISRENYNILIRKHSREGNVDKCMELLAQMESLGFHPNATSYNILIESLGNVGRTLEADSI 262
           + R+ YN +I    + G + + +E+  +M+     P+ T++N LI      G   +A  +
Sbjct: 218 LDRQIYNSIIDTFGKYGELGEALEVFEKMKQESIVPDITTWNSLIRWHCKAGDLTKALQL 277

Query: 263 FQEMKKSGF--EPKVMADNVXXXXXXXXXXXXXAYNVLDEMYQTKIAKNQET----FELL 424
           F EM++ G   +PK++   +              ++V+ + ++    + ++     + +L
Sbjct: 278 FTEMQEQGLYPDPKILMSLISRLGELGK------WDVIKKNFENMTCRGRQEVGAIYAML 331

Query: 425 LEYYVGARRLEDTWFVIAEMKAEGFSLNSHIYSKVIGLYRDNGLWRKALELMREMTETKI 604
           ++ Y    R +D    I+ +K+EGF  ++ ++  +   Y   G   + +++++ M    I
Sbjct: 332 VDIYGQYGRFQDAEDFISALKSEGFLPSASMFCVLANAYAQQGFCEQTVKVLQLMEAEGI 391

Query: 605 PLDRRVYNSIIDTFGKYGELNEAVTMFRNMQREGIKPDVVTYNSLI 742
            L+  + N +I+ FG  G   EA++++++++  GI PDVVTY++L+
Sbjct: 392 ELNIIMLNVLINAFGIAGRHEEALSIYQHIKESGISPDVVTYSTLM 437


>ref|XP_012459103.1| PREDICTED: pentatricopeptide repeat-containing protein At5g42310,
           mitochondrial-like isoform X2 [Gossypium raimondii]
           gi|763809494|gb|KJB76396.1| hypothetical protein
           B456_012G086600 [Gossypium raimondii]
          Length = 511

 Score =  242 bits (617), Expect = 2e-61
 Identities = 118/222 (53%), Positives = 158/222 (71%)
 Frame = +2

Query: 77  EEISRENYNILIRKHSREGNVDKCMELLAQMESLGFHPNATSYNILIESLGNVGRTLEAD 256
           EE+S E +N  I+++ + G+VD  M+L+AQ+E++GFHPN+ SY  LI+SLG+VGRTLEAD
Sbjct: 70  EELSTELHNKTIQEYCKIGDVDNAMKLVAQLEAMGFHPNSISYGFLIDSLGSVGRTLEAD 129

Query: 257 SIFQEMKKSGFEPKVMADNVXXXXXXXXXXXXXAYNVLDEMYQTKIAKNQETFELLLEYY 436
            +FQEM   GF+P++   N              A   L EM +  + KNQET+E+LL+YY
Sbjct: 130 VLFQEMMYLGFKPRIRLFNALLKGFLKKGLLGLAVKFLVEMDRMGVCKNQETYEILLDYY 189

Query: 437 VGARRLEDTWFVIAEMKAEGFSLNSHIYSKVIGLYRDNGLWRKALELMREMTETKIPLDR 616
           V A RLEDTW V+ EMK  G  L+S +Y KVI LYRDNG+W+KA+ L+ E+ E  I LDR
Sbjct: 190 VSAGRLEDTWMVVNEMKTNGIQLSSFVYGKVIRLYRDNGMWKKAIGLVEEIREKGISLDR 249

Query: 617 RVYNSIIDTFGKYGELNEAVTMFRNMQREGIKPDVVTYNSLI 742
           ++YNSIIDTFGKYGEL EA+ +F  M++E I PD+ T+NSLI
Sbjct: 250 QIYNSIIDTFGKYGELGEALEVFEKMKQESIVPDITTWNSLI 291



 Score = 83.2 bits (204), Expect = 2e-13
 Identities = 51/226 (22%), Positives = 115/226 (50%), Gaps = 6/226 (2%)
 Frame = +2

Query: 83  ISRENYNILIRKHSREGNVDKCMELLAQMESLGFHPNATSYNILIESLGNVGRTLEADSI 262
           + R+ YN +I    + G + + +E+  +M+     P+ T++N LI      G   +A  +
Sbjct: 247 LDRQIYNSIIDTFGKYGELGEALEVFEKMKQESIVPDITTWNSLIRWHCKAGDLTKALQL 306

Query: 263 FQEMKKSGF--EPKVMADNVXXXXXXXXXXXXXAYNVLDEMYQTKIAKNQET----FELL 424
           F EM++ G   +PK++   +              ++V+ + ++    + ++     + +L
Sbjct: 307 FTEMQEQGLYPDPKILMSLISRLGELGK------WDVIKKNFENMTCRGRQEVGAIYAML 360

Query: 425 LEYYVGARRLEDTWFVIAEMKAEGFSLNSHIYSKVIGLYRDNGLWRKALELMREMTETKI 604
           ++ Y    R +D    I+ +K+EGF  ++ ++  +   Y   G   + +++++ M    I
Sbjct: 361 VDIYGQYGRFQDAEDFISALKSEGFLPSASMFCVLANAYAQQGFCEQTVKVLQLMEAEGI 420

Query: 605 PLDRRVYNSIIDTFGKYGELNEAVTMFRNMQREGIKPDVVTYNSLI 742
            L+  + N +I+ FG  G   EA++++++++  GI PDVVTY++L+
Sbjct: 421 ELNIIMLNVLINAFGIAGRHEEALSIYQHIKESGISPDVVTYSTLM 466


>ref|XP_012459102.1| PREDICTED: pentatricopeptide repeat-containing protein At5g42310,
           mitochondrial-like isoform X1 [Gossypium raimondii]
           gi|763809493|gb|KJB76395.1| hypothetical protein
           B456_012G086600 [Gossypium raimondii]
          Length = 514

 Score =  242 bits (617), Expect = 2e-61
 Identities = 118/222 (53%), Positives = 158/222 (71%)
 Frame = +2

Query: 77  EEISRENYNILIRKHSREGNVDKCMELLAQMESLGFHPNATSYNILIESLGNVGRTLEAD 256
           EE+S E +N  I+++ + G+VD  M+L+AQ+E++GFHPN+ SY  LI+SLG+VGRTLEAD
Sbjct: 70  EELSTELHNKTIQEYCKIGDVDNAMKLVAQLEAMGFHPNSISYGFLIDSLGSVGRTLEAD 129

Query: 257 SIFQEMKKSGFEPKVMADNVXXXXXXXXXXXXXAYNVLDEMYQTKIAKNQETFELLLEYY 436
            +FQEM   GF+P++   N              A   L EM +  + KNQET+E+LL+YY
Sbjct: 130 VLFQEMMYLGFKPRIRLFNALLKGFLKKGLLGLAVKFLVEMDRMGVCKNQETYEILLDYY 189

Query: 437 VGARRLEDTWFVIAEMKAEGFSLNSHIYSKVIGLYRDNGLWRKALELMREMTETKIPLDR 616
           V A RLEDTW V+ EMK  G  L+S +Y KVI LYRDNG+W+KA+ L+ E+ E  I LDR
Sbjct: 190 VSAGRLEDTWMVVNEMKTNGIQLSSFVYGKVIRLYRDNGMWKKAIGLVEEIREKGISLDR 249

Query: 617 RVYNSIIDTFGKYGELNEAVTMFRNMQREGIKPDVVTYNSLI 742
           ++YNSIIDTFGKYGEL EA+ +F  M++E I PD+ T+NSLI
Sbjct: 250 QIYNSIIDTFGKYGELGEALEVFEKMKQESIVPDITTWNSLI 291



 Score = 83.2 bits (204), Expect = 2e-13
 Identities = 51/226 (22%), Positives = 115/226 (50%), Gaps = 6/226 (2%)
 Frame = +2

Query: 83  ISRENYNILIRKHSREGNVDKCMELLAQMESLGFHPNATSYNILIESLGNVGRTLEADSI 262
           + R+ YN +I    + G + + +E+  +M+     P+ T++N LI      G   +A  +
Sbjct: 247 LDRQIYNSIIDTFGKYGELGEALEVFEKMKQESIVPDITTWNSLIRWHCKAGDLTKALQL 306

Query: 263 FQEMKKSGF--EPKVMADNVXXXXXXXXXXXXXAYNVLDEMYQTKIAKNQET----FELL 424
           F EM++ G   +PK++   +              ++V+ + ++    + ++     + +L
Sbjct: 307 FTEMQEQGLYPDPKILMSLISRLGELGK------WDVIKKNFENMTCRGRQEVGAIYAML 360

Query: 425 LEYYVGARRLEDTWFVIAEMKAEGFSLNSHIYSKVIGLYRDNGLWRKALELMREMTETKI 604
           ++ Y    R +D    I+ +K+EGF  ++ ++  +   Y   G   + +++++ M    I
Sbjct: 361 VDIYGQYGRFQDAEDFISALKSEGFLPSASMFCVLANAYAQQGFCEQTVKVLQLMEAEGI 420

Query: 605 PLDRRVYNSIIDTFGKYGELNEAVTMFRNMQREGIKPDVVTYNSLI 742
            L+  + N +I+ FG  G   EA++++++++  GI PDVVTY++L+
Sbjct: 421 ELNIIMLNVLINAFGIAGRHEEALSIYQHIKESGISPDVVTYSTLM 466


>gb|KHG03831.1| hypothetical protein F383_26634 [Gossypium arboreum]
          Length = 511

 Score =  242 bits (617), Expect = 2e-61
 Identities = 118/222 (53%), Positives = 158/222 (71%)
 Frame = +2

Query: 77  EEISRENYNILIRKHSREGNVDKCMELLAQMESLGFHPNATSYNILIESLGNVGRTLEAD 256
           EE+S E +N  I+++ + G+VD  M+L+AQ+E++GFHPN+ SY  LI+SLG+VGRTLEAD
Sbjct: 70  EELSTELHNKTIQEYCKIGDVDNAMKLVAQLEAMGFHPNSISYGFLIDSLGSVGRTLEAD 129

Query: 257 SIFQEMKKSGFEPKVMADNVXXXXXXXXXXXXXAYNVLDEMYQTKIAKNQETFELLLEYY 436
            +FQEM   GF+P++   N              A   L EM +  + KNQET+E+LL+YY
Sbjct: 130 VLFQEMMYLGFKPRIRLFNALLKGFLKKGLLGLAVKFLVEMDRMGVCKNQETYEILLDYY 189

Query: 437 VGARRLEDTWFVIAEMKAEGFSLNSHIYSKVIGLYRDNGLWRKALELMREMTETKIPLDR 616
           V A RLEDTW V+ EMK  G  L+S +Y KVI LYRDNG+W+KA+ L+ E+ E  I LDR
Sbjct: 190 VSAGRLEDTWMVVNEMKTNGIQLSSFVYGKVIRLYRDNGMWKKAIGLVEEIREKGISLDR 249

Query: 617 RVYNSIIDTFGKYGELNEAVTMFRNMQREGIKPDVVTYNSLI 742
           ++YNSIIDTFGKYGEL EA+ +F  M++E I PD+ T+NSLI
Sbjct: 250 QIYNSIIDTFGKYGELGEALEVFEKMKQESILPDITTWNSLI 291



 Score = 82.0 bits (201), Expect = 4e-13
 Identities = 51/226 (22%), Positives = 114/226 (50%), Gaps = 6/226 (2%)
 Frame = +2

Query: 83  ISRENYNILIRKHSREGNVDKCMELLAQMESLGFHPNATSYNILIESLGNVGRTLEADSI 262
           + R+ YN +I    + G + + +E+  +M+     P+ T++N LI      G   +A  +
Sbjct: 247 LDRQIYNSIIDTFGKYGELGEALEVFEKMKQESILPDITTWNSLIRWHCKAGDLTKALQL 306

Query: 263 FQEMKKSGF--EPKVMADNVXXXXXXXXXXXXXAYNVLDEMYQTKIAKNQET----FELL 424
           F EM++ G   +PK++   +              ++V+ + ++    + ++     + +L
Sbjct: 307 FTEMQEQGLYPDPKILMSLISRLGELGK------WDVIKKNFENMKCRGRQEVGAIYAML 360

Query: 425 LEYYVGARRLEDTWFVIAEMKAEGFSLNSHIYSKVIGLYRDNGLWRKALELMREMTETKI 604
           ++ Y    R +D    I  +K+EGF  ++ ++  +   Y   G   + +++++ M    I
Sbjct: 361 VDIYGQYGRFQDAEDFITALKSEGFLPSASMFCVLANAYAQQGFCEQTVKVLQLMEAEGI 420

Query: 605 PLDRRVYNSIIDTFGKYGELNEAVTMFRNMQREGIKPDVVTYNSLI 742
            L+  + N +I+ FG  G   EA++++++++  GI PDVVTY++L+
Sbjct: 421 ELNIIMLNVLINAFGIAGRHEEALSIYQHIRESGISPDVVTYSTLM 466


>gb|KHG03829.1| hypothetical protein F383_26634 [Gossypium arboreum]
          Length = 1628

 Score =  242 bits (617), Expect = 2e-61
 Identities = 118/222 (53%), Positives = 158/222 (71%)
 Frame = +2

Query: 77  EEISRENYNILIRKHSREGNVDKCMELLAQMESLGFHPNATSYNILIESLGNVGRTLEAD 256
           EE+S E +N  I+++ + G+VD  M+L+AQ+E++GFHPN+ SY  LI+SLG+VGRTLEAD
Sbjct: 70  EELSTELHNKTIQEYCKIGDVDNAMKLVAQLEAMGFHPNSISYGFLIDSLGSVGRTLEAD 129

Query: 257 SIFQEMKKSGFEPKVMADNVXXXXXXXXXXXXXAYNVLDEMYQTKIAKNQETFELLLEYY 436
            +FQEM   GF+P++   N              A   L EM +  + KNQET+E+LL+YY
Sbjct: 130 VLFQEMMYLGFKPRIRLFNALLKGFLKKGLLGLAVKFLVEMDRMGVCKNQETYEILLDYY 189

Query: 437 VGARRLEDTWFVIAEMKAEGFSLNSHIYSKVIGLYRDNGLWRKALELMREMTETKIPLDR 616
           V A RLEDTW V+ EMK  G  L+S +Y KVI LYRDNG+W+KA+ L+ E+ E  I LDR
Sbjct: 190 VSAGRLEDTWMVVNEMKTNGIQLSSFVYGKVIRLYRDNGMWKKAIGLVEEIREKGISLDR 249

Query: 617 RVYNSIIDTFGKYGELNEAVTMFRNMQREGIKPDVVTYNSLI 742
           ++YNSIIDTFGKYGEL EA+ +F  M++E I PD+ T+NSLI
Sbjct: 250 QIYNSIIDTFGKYGELGEALEVFEKMKQESILPDITTWNSLI 291



 Score = 82.0 bits (201), Expect = 4e-13
 Identities = 51/226 (22%), Positives = 114/226 (50%), Gaps = 6/226 (2%)
 Frame = +2

Query: 83  ISRENYNILIRKHSREGNVDKCMELLAQMESLGFHPNATSYNILIESLGNVGRTLEADSI 262
           + R+ YN +I    + G + + +E+  +M+     P+ T++N LI      G   +A  +
Sbjct: 247 LDRQIYNSIIDTFGKYGELGEALEVFEKMKQESILPDITTWNSLIRWHCKAGDLTKALQL 306

Query: 263 FQEMKKSGF--EPKVMADNVXXXXXXXXXXXXXAYNVLDEMYQTKIAKNQET----FELL 424
           F EM++ G   +PK++   +              ++V+ + ++    + ++     + +L
Sbjct: 307 FTEMQEQGLYPDPKILMSLISRLGELGK------WDVIKKNFENMKCRGRQEVGAIYAML 360

Query: 425 LEYYVGARRLEDTWFVIAEMKAEGFSLNSHIYSKVIGLYRDNGLWRKALELMREMTETKI 604
           ++ Y    R +D    I  +K+EGF  ++ ++  +   Y   G   + +++++ M    I
Sbjct: 361 VDIYGQYGRFQDAEDFITALKSEGFLPSASMFCVLANAYAQQGFCEQTVKVLQLMEAEGI 420

Query: 605 PLDRRVYNSIIDTFGKYGELNEAVTMFRNMQREGIKPDVVTYNSLI 742
            L+  + N +I+ FG  G   EA++++++++  GI PDVVTY++L+
Sbjct: 421 ELNIIMLNVLINAFGIAGRHEEALSIYQHIRESGISPDVVTYSTLM 466


>gb|KHG03828.1| hypothetical protein F383_26634 [Gossypium arboreum]
          Length = 1639

 Score =  242 bits (617), Expect = 2e-61
 Identities = 118/222 (53%), Positives = 158/222 (71%)
 Frame = +2

Query: 77  EEISRENYNILIRKHSREGNVDKCMELLAQMESLGFHPNATSYNILIESLGNVGRTLEAD 256
           EE+S E +N  I+++ + G+VD  M+L+AQ+E++GFHPN+ SY  LI+SLG+VGRTLEAD
Sbjct: 70  EELSTELHNKTIQEYCKIGDVDNAMKLVAQLEAMGFHPNSISYGFLIDSLGSVGRTLEAD 129

Query: 257 SIFQEMKKSGFEPKVMADNVXXXXXXXXXXXXXAYNVLDEMYQTKIAKNQETFELLLEYY 436
            +FQEM   GF+P++   N              A   L EM +  + KNQET+E+LL+YY
Sbjct: 130 VLFQEMMYLGFKPRIRLFNALLKGFLKKGLLGLAVKFLVEMDRMGVCKNQETYEILLDYY 189

Query: 437 VGARRLEDTWFVIAEMKAEGFSLNSHIYSKVIGLYRDNGLWRKALELMREMTETKIPLDR 616
           V A RLEDTW V+ EMK  G  L+S +Y KVI LYRDNG+W+KA+ L+ E+ E  I LDR
Sbjct: 190 VSAGRLEDTWMVVNEMKTNGIQLSSFVYGKVIRLYRDNGMWKKAIGLVEEIREKGISLDR 249

Query: 617 RVYNSIIDTFGKYGELNEAVTMFRNMQREGIKPDVVTYNSLI 742
           ++YNSIIDTFGKYGEL EA+ +F  M++E I PD+ T+NSLI
Sbjct: 250 QIYNSIIDTFGKYGELGEALEVFEKMKQESILPDITTWNSLI 291



 Score = 82.0 bits (201), Expect = 4e-13
 Identities = 51/226 (22%), Positives = 114/226 (50%), Gaps = 6/226 (2%)
 Frame = +2

Query: 83  ISRENYNILIRKHSREGNVDKCMELLAQMESLGFHPNATSYNILIESLGNVGRTLEADSI 262
           + R+ YN +I    + G + + +E+  +M+     P+ T++N LI      G   +A  +
Sbjct: 247 LDRQIYNSIIDTFGKYGELGEALEVFEKMKQESILPDITTWNSLIRWHCKAGDLTKALQL 306

Query: 263 FQEMKKSGF--EPKVMADNVXXXXXXXXXXXXXAYNVLDEMYQTKIAKNQET----FELL 424
           F EM++ G   +PK++   +              ++V+ + ++    + ++     + +L
Sbjct: 307 FTEMQEQGLYPDPKILMSLISRLGELGK------WDVIKKNFENMKCRGRQEVGAIYAML 360

Query: 425 LEYYVGARRLEDTWFVIAEMKAEGFSLNSHIYSKVIGLYRDNGLWRKALELMREMTETKI 604
           ++ Y    R +D    I  +K+EGF  ++ ++  +   Y   G   + +++++ M    I
Sbjct: 361 VDIYGQYGRFQDAEDFITALKSEGFLPSASMFCVLANAYAQQGFCEQTVKVLQLMEAEGI 420

Query: 605 PLDRRVYNSIIDTFGKYGELNEAVTMFRNMQREGIKPDVVTYNSLI 742
            L+  + N +I+ FG  G   EA++++++++  GI PDVVTY++L+
Sbjct: 421 ELNIIMLNVLINAFGIAGRHEEALSIYQHIRESGISPDVVTYSTLM 466


>ref|XP_002519998.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223540762|gb|EEF42322.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 498

 Score =  238 bits (606), Expect = 4e-60
 Identities = 119/233 (51%), Positives = 165/233 (70%)
 Frame = +2

Query: 44  NLTILQHSCVTEEISRENYNILIRKHSREGNVDKCMELLAQMESLGFHPNATSYNILIES 223
           ++T+  +    +E+S E+YN  I    + G+VDK M LLA M+SLGFHP++ SY  LIE+
Sbjct: 6   SVTMPTNESTGQELSGESYNSCICDCCKVGDVDKAMTLLADMQSLGFHPSSLSYTCLIET 65

Query: 224 LGNVGRTLEADSIFQEMKKSGFEPKVMADNVXXXXXXXXXXXXXAYNVLDEMYQTKIAKN 403
           L +VGRTLEA++++QEM   G +P++   N+             A  VL  +    + +N
Sbjct: 66  LLSVGRTLEAEALYQEMMCFGLKPRLKLYNIMLRGFLKKGLLRVAERVLRILDDLGLHRN 125

Query: 404 QETFELLLEYYVGARRLEDTWFVIAEMKAEGFSLNSHIYSKVIGLYRDNGLWRKALELMR 583
           QET+E+LL+Y V A RLEDTW VI EMK +GF LNS +YSKVIGLYRDNG+W+KA+ ++ 
Sbjct: 126 QETYEILLDYNVNAGRLEDTWSVINEMKQKGFQLNSFVYSKVIGLYRDNGMWKKAIGIIE 185

Query: 584 EMTETKIPLDRRVYNSIIDTFGKYGELNEAVTMFRNMQREGIKPDVVTYNSLI 742
           E+ E  +PLD+ +YNSIIDTFGKYGEL+EA+ +  NMQ++GI PD+VT+NSLI
Sbjct: 186 EIREMGMPLDKHIYNSIIDTFGKYGELDEALEVLSNMQQQGITPDIVTWNSLI 238



 Score = 84.3 bits (207), Expect = 8e-14
 Identities = 53/226 (23%), Positives = 112/226 (49%), Gaps = 6/226 (2%)
 Frame = +2

Query: 83  ISRENYNILIRKHSREGNVDKCMELLAQMESLGFHPNATSYNILIESLGNVGRTLEADSI 262
           + +  YN +I    + G +D+ +E+L+ M+  G  P+  ++N LI      G   +A  +
Sbjct: 194 LDKHIYNSIIDTFGKYGELDEALEVLSNMQQQGITPDIVTWNSLIRWHCKAGNLSKALEL 253

Query: 263 FQEMKKSGF--EPKVMADNVXXXXXXXXXXXXXAYNVLDEMYQTKIA----KNQETFELL 424
           F +M+  G   +PK++   +              +N++ E +    +    K+   + +L
Sbjct: 254 FSKMQAQGLYPDPKILVTIISRLAEQGK------WNIIRENFDIMKSWGYKKSGAIYAIL 307

Query: 425 LEYYVGARRLEDTWFVIAEMKAEGFSLNSHIYSKVIGLYRDNGLWRKALELMREMTETKI 604
           ++ Y    R +D    I+ +K+EG   ++ ++  +   Y   GL  + +++++ M    I
Sbjct: 308 VDIYGQYGRFQDAEECISALKSEGILPSASMFCVLANAYAQQGLCEQTVKVLQLMEAEGI 367

Query: 605 PLDRRVYNSIIDTFGKYGELNEAVTMFRNMQREGIKPDVVTYNSLI 742
             +  + N +I+ FG  G   EA++++ +M+  GI PDVVTY++L+
Sbjct: 368 EPNLIMLNVLINAFGIAGRHREALSIYHHMKESGISPDVVTYSTLM 413


>gb|KDO42685.1| hypothetical protein CISIN_1g009556mg [Citrus sinensis]
          Length = 532

 Score =  237 bits (605), Expect = 5e-60
 Identities = 120/236 (50%), Positives = 164/236 (69%)
 Frame = +2

Query: 35  KTLNLTILQHSCVTEEISRENYNILIRKHSREGNVDKCMELLAQMESLGFHPNATSYNIL 214
           K L++     S   EE S  +YN  I+   + G++D+ M LLAQM++LGFHP++ SY  L
Sbjct: 59  KNLSIKSPDGSNSGEEFSGNSYNKSIQYCCKLGDIDEAMALLAQMQALGFHPSSISYASL 118

Query: 215 IESLGNVGRTLEADSIFQEMKKSGFEPKVMADNVXXXXXXXXXXXXXAYNVLDEMYQTKI 394
           IE+L +VGRTLEAD+IFQEM   GF PK+   N+                +L  M    I
Sbjct: 119 IEALASVGRTLEADAIFQEMVCFGFNPKLRFYNILLRGFLKKGLLGLGSRLLMVMEDMGI 178

Query: 395 AKNQETFELLLEYYVGARRLEDTWFVIAEMKAEGFSLNSHIYSKVIGLYRDNGLWRKALE 574
            +NQET+E+LL+Y+V A RL+DTW +I EM+++GF LNS +Y KVIGLYRDNG+W+KA+ 
Sbjct: 179 CRNQETYEILLDYHVNAGRLDDTWLIINEMRSKGFQLNSFVYGKVIGLYRDNGMWKKAVG 238

Query: 575 LMREMTETKIPLDRRVYNSIIDTFGKYGELNEAVTMFRNMQREGIKPDVVTYNSLI 742
           ++ E+ E  + LDR++YNSIIDTFGKYGEL EA+ +F  MQ+E I+PD+VT+NSLI
Sbjct: 239 IVEEIREMGLSLDRQIYNSIIDTFGKYGELVEALEVFEKMQQESIRPDIVTWNSLI 294



 Score = 77.8 bits (190), Expect = 7e-12
 Identities = 54/215 (25%), Positives = 95/215 (44%)
 Frame = +2

Query: 98  YNILIRKHSREGNVDKCMELLAQMESLGFHPNATSYNILIESLGNVGRTLEADSIFQEMK 277
           +N LIR H + G+V K +EL  QM+  GF+P+   +  +I  LG +G+       F+ MK
Sbjct: 290 WNSLIRWHCKAGDVAKALELFTQMQEQGFYPDPKIFITIISCLGELGKWDVIKKNFENMK 349

Query: 278 KSGFEPKVMADNVXXXXXXXXXXXXXAYNVLDEMYQTKIAKNQETFELLLEYYVGARRLE 457
             G                                     K    + +L++ Y    R  
Sbjct: 350 DRGH-----------------------------------GKIGAIYAILVDIYGQYGRFR 374

Query: 458 DTWFVIAEMKAEGFSLNSHIYSKVIGLYRDNGLWRKALELMREMTETKIPLDRRVYNSII 637
           D    IA +K EG   +  ++  +   Y   GL  + +++++ M    I  +  + N +I
Sbjct: 375 DPEECIAALKLEGLQPSGSMFCILANAYAQQGLCEQTVKVLQLMEPEGIEPNLVMLNVLI 434

Query: 638 DTFGKYGELNEAVTMFRNMQREGIKPDVVTYNSLI 742
           + FG  G+  EA++++  M+  GI PD+VTY++L+
Sbjct: 435 NAFGVAGKYKEALSVYHLMKDIGISPDLVTYSTLM 469


>ref|XP_006491815.1| PREDICTED: pentatricopeptide repeat-containing protein At5g42310,
           mitochondrial-like isoform X1 [Citrus sinensis]
           gi|641823253|gb|KDO42681.1| hypothetical protein
           CISIN_1g009556mg [Citrus sinensis]
           gi|641823254|gb|KDO42682.1| hypothetical protein
           CISIN_1g009556mg [Citrus sinensis]
           gi|641823255|gb|KDO42683.1| hypothetical protein
           CISIN_1g009556mg [Citrus sinensis]
           gi|641823256|gb|KDO42684.1| hypothetical protein
           CISIN_1g009556mg [Citrus sinensis]
          Length = 514

 Score =  237 bits (605), Expect = 5e-60
 Identities = 120/236 (50%), Positives = 164/236 (69%)
 Frame = +2

Query: 35  KTLNLTILQHSCVTEEISRENYNILIRKHSREGNVDKCMELLAQMESLGFHPNATSYNIL 214
           K L++     S   EE S  +YN  I+   + G++D+ M LLAQM++LGFHP++ SY  L
Sbjct: 59  KNLSIKSPDGSNSGEEFSGNSYNKSIQYCCKLGDIDEAMALLAQMQALGFHPSSISYASL 118

Query: 215 IESLGNVGRTLEADSIFQEMKKSGFEPKVMADNVXXXXXXXXXXXXXAYNVLDEMYQTKI 394
           IE+L +VGRTLEAD+IFQEM   GF PK+   N+                +L  M    I
Sbjct: 119 IEALASVGRTLEADAIFQEMVCFGFNPKLRFYNILLRGFLKKGLLGLGSRLLMVMEDMGI 178

Query: 395 AKNQETFELLLEYYVGARRLEDTWFVIAEMKAEGFSLNSHIYSKVIGLYRDNGLWRKALE 574
            +NQET+E+LL+Y+V A RL+DTW +I EM+++GF LNS +Y KVIGLYRDNG+W+KA+ 
Sbjct: 179 CRNQETYEILLDYHVNAGRLDDTWLIINEMRSKGFQLNSFVYGKVIGLYRDNGMWKKAVG 238

Query: 575 LMREMTETKIPLDRRVYNSIIDTFGKYGELNEAVTMFRNMQREGIKPDVVTYNSLI 742
           ++ E+ E  + LDR++YNSIIDTFGKYGEL EA+ +F  MQ+E I+PD+VT+NSLI
Sbjct: 239 IVEEIREMGLSLDRQIYNSIIDTFGKYGELVEALEVFEKMQQESIRPDIVTWNSLI 294



 Score = 77.8 bits (190), Expect = 7e-12
 Identities = 54/215 (25%), Positives = 95/215 (44%)
 Frame = +2

Query: 98  YNILIRKHSREGNVDKCMELLAQMESLGFHPNATSYNILIESLGNVGRTLEADSIFQEMK 277
           +N LIR H + G+V K +EL  QM+  GF+P+   +  +I  LG +G+       F+ MK
Sbjct: 290 WNSLIRWHCKAGDVAKALELFTQMQEQGFYPDPKIFITIISCLGELGKWDVIKKNFENMK 349

Query: 278 KSGFEPKVMADNVXXXXXXXXXXXXXAYNVLDEMYQTKIAKNQETFELLLEYYVGARRLE 457
             G                                     K    + +L++ Y    R  
Sbjct: 350 DRGH-----------------------------------GKIGAIYAILVDIYGQYGRFR 374

Query: 458 DTWFVIAEMKAEGFSLNSHIYSKVIGLYRDNGLWRKALELMREMTETKIPLDRRVYNSII 637
           D    IA +K EG   +  ++  +   Y   GL  + +++++ M    I  +  + N +I
Sbjct: 375 DPEECIAALKLEGLQPSGSMFCILANAYAQQGLCEQTVKVLQLMEPEGIEPNLVMLNVLI 434

Query: 638 DTFGKYGELNEAVTMFRNMQREGIKPDVVTYNSLI 742
           + FG  G+  EA++++  M+  GI PD+VTY++L+
Sbjct: 435 NAFGVAGKYKEALSVYHLMKDIGISPDLVTYSTLM 469


>ref|XP_006428506.1| hypothetical protein CICLE_v10011504mg [Citrus clementina]
           gi|567871835|ref|XP_006428507.1| hypothetical protein
           CICLE_v10011504mg [Citrus clementina]
           gi|557530563|gb|ESR41746.1| hypothetical protein
           CICLE_v10011504mg [Citrus clementina]
           gi|557530564|gb|ESR41747.1| hypothetical protein
           CICLE_v10011504mg [Citrus clementina]
          Length = 514

 Score =  236 bits (601), Expect = 2e-59
 Identities = 119/236 (50%), Positives = 164/236 (69%)
 Frame = +2

Query: 35  KTLNLTILQHSCVTEEISRENYNILIRKHSREGNVDKCMELLAQMESLGFHPNATSYNIL 214
           K L++     S   EE S  +YN  I+   + G++D+ M LLAQM++LGFHP++ SY  L
Sbjct: 59  KNLSIKSPDGSNSGEEFSGNSYNKSIQYCCKLGDIDEAMALLAQMQALGFHPSSISYASL 118

Query: 215 IESLGNVGRTLEADSIFQEMKKSGFEPKVMADNVXXXXXXXXXXXXXAYNVLDEMYQTKI 394
           IE+L +VGRTLEAD+IFQEM   GF PK+   N+                +L  M    I
Sbjct: 119 IEALASVGRTLEADAIFQEMVCFGFNPKLRFYNILLRGFLKKGLLGLGSRLLMVMEDMGI 178

Query: 395 AKNQETFELLLEYYVGARRLEDTWFVIAEMKAEGFSLNSHIYSKVIGLYRDNGLWRKALE 574
            +NQET+E+LL+Y+V A RL+DTW +I EM+++GF LNS +Y KVIGLYRDNG+W+KA+ 
Sbjct: 179 CRNQETYEILLDYHVNAGRLDDTWLIINEMRSKGFQLNSFVYGKVIGLYRDNGMWKKAVG 238

Query: 575 LMREMTETKIPLDRRVYNSIIDTFGKYGELNEAVTMFRNMQREGIKPDVVTYNSLI 742
           ++ E+ E  + LDR++YNSIIDTFGKYGEL EA+ +F  M++E I+PD+VT+NSLI
Sbjct: 239 IVEEIREMGLSLDRQIYNSIIDTFGKYGELVEALEVFEKMRQESIRPDIVTWNSLI 294



 Score = 77.8 bits (190), Expect = 7e-12
 Identities = 54/215 (25%), Positives = 95/215 (44%)
 Frame = +2

Query: 98  YNILIRKHSREGNVDKCMELLAQMESLGFHPNATSYNILIESLGNVGRTLEADSIFQEMK 277
           +N LIR H + G+V K +EL  QM+  GF+P+   +  +I  LG +G+       F+ MK
Sbjct: 290 WNSLIRWHCKAGDVAKALELFTQMQEQGFYPDPKIFITIISCLGELGKWDVIKKNFENMK 349

Query: 278 KSGFEPKVMADNVXXXXXXXXXXXXXAYNVLDEMYQTKIAKNQETFELLLEYYVGARRLE 457
             G                                     K    + +L++ Y    R  
Sbjct: 350 DRGH-----------------------------------GKIGAIYAILVDIYGQYGRFR 374

Query: 458 DTWFVIAEMKAEGFSLNSHIYSKVIGLYRDNGLWRKALELMREMTETKIPLDRRVYNSII 637
           D    IA +K EG   +  ++  +   Y   GL  + +++++ M    I  +  + N +I
Sbjct: 375 DPEECIAALKLEGLQPSGSMFCILANAYAQQGLCEQTVKVLQLMEPEGIEPNLVMLNVLI 434

Query: 638 DTFGKYGELNEAVTMFRNMQREGIKPDVVTYNSLI 742
           + FG  G+  EA++++  M+  GI PD+VTY++L+
Sbjct: 435 NAFGVAGKYKEALSVYHLMKDIGISPDLVTYSTLM 469


>ref|XP_006351327.1| PREDICTED: pentatricopeptide repeat-containing protein At5g42310,
           mitochondrial-like isoform X1 [Solanum tuberosum]
           gi|565369409|ref|XP_006351328.1| PREDICTED:
           pentatricopeptide repeat-containing protein At5g42310,
           mitochondrial-like isoform X2 [Solanum tuberosum]
           gi|565369411|ref|XP_006351329.1| PREDICTED:
           pentatricopeptide repeat-containing protein At5g42310,
           mitochondrial-like isoform X3 [Solanum tuberosum]
          Length = 523

 Score =  234 bits (597), Expect = 5e-59
 Identities = 118/222 (53%), Positives = 158/222 (71%)
 Frame = +2

Query: 77  EEISRENYNILIRKHSREGNVDKCMELLAQMESLGFHPNATSYNILIESLGNVGRTLEAD 256
           EEIS + YN  I +   EG+VDK M LL++ME+LGFHP+  SY+ LI +LG+VGRT EAD
Sbjct: 81  EEISYDLYNESICELCTEGDVDKAMRLLSEMEALGFHPSFVSYSSLIAALGSVGRTSEAD 140

Query: 257 SIFQEMKKSGFEPKVMADNVXXXXXXXXXXXXXAYNVLDEMYQTKIAKNQETFELLLEYY 436
           +IFQEM  S  +P++   N+             A  VL  +    + +NQET+E+LLEYY
Sbjct: 141 AIFQEMLCSSRKPRIKVFNILLRSFLRKGLLRLADKVLMLLDDLAVDRNQETYEILLEYY 200

Query: 437 VGARRLEDTWFVIAEMKAEGFSLNSHIYSKVIGLYRDNGLWRKALELMREMTETKIPLDR 616
           V A RLEDTW ++A+M+ E + LNS +YSK+I LYRDNG+W+KAL ++ E+ E  + LD+
Sbjct: 201 VSAGRLEDTWLIVAKMRRESYPLNSFVYSKIIELYRDNGMWKKALGIVEEIREMGLRLDK 260

Query: 617 RVYNSIIDTFGKYGELNEAVTMFRNMQREGIKPDVVTYNSLI 742
           R++NSIIDTFGKYGEL EA+ MF  M++EGIKPD  T+NSLI
Sbjct: 261 RIFNSIIDTFGKYGELGEALEMFDKMRQEGIKPDFRTWNSLI 302



 Score = 77.0 bits (188), Expect = 1e-11
 Identities = 51/215 (23%), Positives = 97/215 (45%)
 Frame = +2

Query: 98  YNILIRKHSREGNVDKCMELLAQMESLGFHPNATSYNILIESLGNVGRTLEADSIFQEMK 277
           +N LIR H + G++D  +EL  +M+  G +P+   + I+I  L   GR    D+I + M+
Sbjct: 298 WNSLIRWHCKYGHLDTAIELFNEMQDQGLYPDPKIFIIIITHLVEQGRWAVIDTILENMQ 357

Query: 278 KSGFEPKVMADNVXXXXXXXXXXXXXAYNVLDEMYQTKIAKNQETFELLLEYYVGARRLE 457
             G                                     K+   + +L++ Y    R E
Sbjct: 358 GRGHH-----------------------------------KSGAIYAVLVDIYGQHGRFE 382

Query: 458 DTWFVIAEMKAEGFSLNSHIYSKVIGLYRDNGLWRKALELMREMTETKIPLDRRVYNSII 637
           D  + +  +K EG  L+  I+  +   Y   GL  + +++++ M    +  +  + N +I
Sbjct: 383 DAEYCLNSLKLEGLQLSPSIFCVLAHAYAQQGLCEQTVKVLQIMEAEGMEPNLIMLNMLI 442

Query: 638 DTFGKYGELNEAVTMFRNMQREGIKPDVVTYNSLI 742
           + FG  G   EA +++ +++  GI PDV+TY++L+
Sbjct: 443 NAFGNAGRHMEAQSIYLHIKEMGITPDVITYSTLM 477



 Score = 57.4 bits (137), Expect = 1e-05
 Identities = 36/139 (25%), Positives = 66/139 (47%)
 Frame = +2

Query: 8   KHRRFQKAAKTLNLTILQHSCVTEEISRENYNILIRKHSREGNVDKCMELLAQMESLGFH 187
           +H RF+ A   LN   L+      ++S   + +L   ++++G  ++ +++L  ME+ G  
Sbjct: 377 QHGRFEDAEYCLNSLKLEGL----QLSPSIFCVLAHAYAQQGLCEQTVKVLQIMEAEGME 432

Query: 188 PNATSYNILIESLGNVGRTLEADSIFQEMKKSGFEPKVMADNVXXXXXXXXXXXXXAYNV 367
           PN    N+LI + GN GR +EA SI+  +K+ G  P V+  +                 +
Sbjct: 433 PNLIMLNMLINAFGNAGRHMEAQSIYLHIKEMGITPDVITYSTLMKAFMRAKKFDQVPKI 492

Query: 368 LDEMYQTKIAKNQETFELL 424
             EM  T    +++  E+L
Sbjct: 493 YSEMESTGCTPDRKAREML 511