BLASTX nr result

ID: Papaver29_contig00037229 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver29_contig00037229
         (652 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_010272778.1| PREDICTED: F-box/LRR-repeat protein At4g1410...    67   1e-08
ref|XP_010277952.1| PREDICTED: F-box/LRR-repeat protein At3g5890...    61   7e-07
ref|XP_010277951.1| PREDICTED: F-box/LRR-repeat protein At3g5890...    61   7e-07

>ref|XP_010272778.1| PREDICTED: F-box/LRR-repeat protein At4g14103-like isoform X1
           [Nelumbo nucifera]
          Length = 498

 Score = 66.6 bits (161), Expect = 1e-08
 Identities = 42/146 (28%), Positives = 73/146 (50%), Gaps = 19/146 (13%)
 Frame = -2

Query: 606 FSNLRLVKLESYLPKHIIRALGWLRCISPNVESLSIVNLGMPSSDIPDSEDYFAGVPLD- 430
           F NLR ++L+++L +  IRA+ +L   SPN+E+L +       +     + +F    LD 
Sbjct: 352 FCNLRYLRLKTWLSRDCIRAIAYLLKCSPNIETLVLETSVKSYTGYEKQQLFFDETKLDS 411

Query: 429 ------------------HLRSVEIRGLLGHFNELKLVEIIFKKAVVLEKMLLFSCKKST 304
                             HL+SVE+R L G  NEL+ ++ + K A+ LE+M++ +  + +
Sbjct: 412 EIIEDNWEAELPFQCMLCHLKSVEMRNLQGIENELRFLKFLMKNAMTLEEMIIVTSTRFS 471

Query: 303 TEKCLLTFGEKLLTLPRASSNITTFF 226
           +      F EKL   P+AS ++   F
Sbjct: 472 SSGIKEKFSEKLQAFPQASPSLGILF 497


>ref|XP_010277952.1| PREDICTED: F-box/LRR-repeat protein At3g58900-like isoform X2
           [Nelumbo nucifera]
          Length = 455

 Score = 60.8 bits (146), Expect = 7e-07
 Identities = 31/73 (42%), Positives = 52/73 (71%), Gaps = 2/73 (2%)
 Frame = -2

Query: 435 LDHLRSVEIRGLLGHFNELKLVEIIFKKAVVLEKMLLFSCK--KSTTEKCLLTFGEKLLT 262
           L+HL+SVEI+ LLG+ NEL  ++ + K+A+VL+K+++ + K      E+ L+ F ++L T
Sbjct: 383 LNHLKSVEIQNLLGYVNELMFLKFLLKRAMVLQKIVINTSKTWPQDREERLMKFRKELQT 442

Query: 261 LPRASSNITTFFI 223
            P+ASS++T  FI
Sbjct: 443 FPQASSSVTILFI 455


>ref|XP_010277951.1| PREDICTED: F-box/LRR-repeat protein At3g58900-like isoform X1
           [Nelumbo nucifera]
          Length = 510

 Score = 60.8 bits (146), Expect = 7e-07
 Identities = 31/73 (42%), Positives = 52/73 (71%), Gaps = 2/73 (2%)
 Frame = -2

Query: 435 LDHLRSVEIRGLLGHFNELKLVEIIFKKAVVLEKMLLFSCK--KSTTEKCLLTFGEKLLT 262
           L+HL+SVEI+ LLG+ NEL  ++ + K+A+VL+K+++ + K      E+ L+ F ++L T
Sbjct: 438 LNHLKSVEIQNLLGYVNELMFLKFLLKRAMVLQKIVINTSKTWPQDREERLMKFRKELQT 497

Query: 261 LPRASSNITTFFI 223
            P+ASS++T  FI
Sbjct: 498 FPQASSSVTILFI 510


Top