BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver29_contig00035589
         (695 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002268709.1| PREDICTED: RNA polymerase sigma factor sigE,...   130   6e-28
ref|XP_010266467.1| PREDICTED: RNA polymerase sigma factor sigE,...   129   1e-27
gb|AKC88737.1| sigma factor [Francoa sonchifolia]                     117   5e-24
gb|AKC88744.1| sigma factor [Hypseocharis bilobata]                   115   3e-23
ref|XP_008465379.1| PREDICTED: RNA polymerase sigma factor sigE,...   114   8e-23
ref|XP_011007924.1| PREDICTED: RNA polymerase sigma factor sigE,...   112   2e-22
ref|XP_006376620.1| RNA polymerase sigma subunit SigE family pro...   112   2e-22
gb|AKC88745.1| sigma factor [Melianthus villosus]                     112   3e-22
ref|XP_011001910.1| PREDICTED: RNA polymerase sigma factor sigE,...   112   3e-22
gb|AKC88740.1| sigma factor [Geranium maderense]                      110   6e-22
gb|AKC88728.1| sigma factor [California macrophylla]                  110   8e-22
gb|AKC88731.1| sigma factor [Erodium foetidum]                        108   3e-21
ref|XP_011651413.1| PREDICTED: RNA polymerase sigma factor sigE,...   107   9e-21
gb|AKC88746.1| sigma factor [Monsonia emarginata]                     105   4e-20
ref|XP_007219010.1| hypothetical protein PRUPE_ppa004259mg [Prun...   104   6e-20
ref|XP_007219009.1| hypothetical protein PRUPE_ppa004259mg [Prun...   104   6e-20
ref|XP_010097858.1| RNA polymerase sigma factor rpoD [Morus nota...   103   1e-19
gb|AKC88747.1| sigma factor [Monsonia marlothii]                      103   1e-19
gb|AKC88736.1| sigma factor [Erodium trifolium]                       103   1e-19
gb|KDO56129.1| hypothetical protein CISIN_1g010092mg [Citrus sin...   103   1e-19

>ref|XP_002268709.1| PREDICTED: RNA polymerase sigma factor sigE,
           chloroplastic/mitochondrial [Vitis vinifera]
           gi|302143685|emb|CBI22546.3| unnamed protein product
           [Vitis vinifera]
          Length = 518

 Score =  130 bits (328), Expect = 6e-28
 Identities = 72/143 (50%), Positives = 97/143 (67%), Gaps = 1/143 (0%)
 Frame = +1

Query: 262 KFAALHSPLKRPLILAFKTDKKKNI-LITPSEPIRIPVESPKESKRLRRSENKPAKRVKA 438
           KF+   +PL+RPL+LAFK DK KNI L+TP EPI +P+E+ K+ K+  R  +KP+KRVKA
Sbjct: 22  KFSNHQTPLRRPLVLAFKADKAKNIALVTPHEPIPLPIETSKDHKKRLRRASKPSKRVKA 81

Query: 439 VATDEAPFCTLDLDFNEAAVKLENLYNLSPPSDVSDLEDIGSXXXXXXXXXXXXXGEGNK 618
           V+TDE   C+++LD+NEAA KLEN+Y LSP +DVS+ ED+                  +K
Sbjct: 82  VSTDEVSPCSVELDYNEAAAKLENIYKLSPATDVSEAEDLERVVRRGRQRRKRVTLADDK 141

Query: 619 KDGKEVNDFVVRNPMKKAKRLNL 687
            + KEV+D VVR   KK KRL+L
Sbjct: 142 AE-KEVSDNVVRIHNKKPKRLSL 163


>ref|XP_010266467.1| PREDICTED: RNA polymerase sigma factor sigE,
           chloroplastic/mitochondrial [Nelumbo nucifera]
          Length = 514

 Score =  129 bits (325), Expect = 1e-27
 Identities = 72/162 (44%), Positives = 101/162 (62%), Gaps = 1/162 (0%)
 Frame = +1

Query: 205 MGVVXXXXXXXXXXXXXXEKFAALHSPLKRPLILAFKTDKKKN-ILITPSEPIRIPVESP 381
           MGVV               +F+   + LKRPLILAFKTDK K+  L+T  EPI +P+++P
Sbjct: 1   MGVVTVSSSSSQTPLGLSSRFSVHQTQLKRPLILAFKTDKAKDRALVTHHEPIPLPMDTP 60

Query: 382 KESKRLRRSENKPAKRVKAVATDEAPFCTLDLDFNEAAVKLENLYNLSPPSDVSDLEDIG 561
           KE+++  R   KP+KRVK V +DEA  CT+++D+N+ A KLE++Y LSPP+DVSD++D  
Sbjct: 61  KENQKRLRRATKPSKRVKVVCSDEASSCTIEMDYNDVAAKLESIYKLSPPTDVSDVDDT- 119

Query: 562 SXXXXXXXXXXXXXGEGNKKDGKEVNDFVVRNPMKKAKRLNL 687
                         GE ++K GKE +D V+RN   K KRL+L
Sbjct: 120 DRVGRRRRRTRKKLGEADRKTGKESSDNVIRN-HNKNKRLSL 160


>gb|AKC88737.1| sigma factor [Francoa sonchifolia]
          Length = 513

 Score =  117 bits (294), Expect = 5e-24
 Identities = 70/162 (43%), Positives = 89/162 (54%), Gaps = 1/162 (0%)
 Frame = +1

Query: 205 MGVVXXXXXXXXXXXXXXEKFAALHSPLKRPLILAFKTDKKKNI-LITPSEPIRIPVESP 381
           MGVV               KF+     LKRP I++ K DK  NI L+ P E I +P+++P
Sbjct: 1   MGVVTVSSSPARSPLGLSTKFSTHRCTLKRPSIVSLKADKTNNIALVAPQEQIPLPIQTP 60

Query: 382 KESKRLRRSENKPAKRVKAVATDEAPFCTLDLDFNEAAVKLENLYNLSPPSDVSDLEDIG 561
           K+ ++      K +KRVKAV+TD    CTL+LDFNEAA KLEN+Y LSPP+D SD EDI 
Sbjct: 61  KKQRKRLGRAIKTSKRVKAVSTDVTSPCTLELDFNEAAAKLENIYKLSPPTDCSDTEDID 120

Query: 562 SXXXXXXXXXXXXXGEGNKKDGKEVNDFVVRNPMKKAKRLNL 687
                           G K+     +D VVRN  KK KRL+L
Sbjct: 121 GMKSRHRKRMNGGDDTGEKR----TSDNVVRNRTKKVKRLSL 158


>gb|AKC88744.1| sigma factor [Hypseocharis bilobata]
          Length = 516

 Score =  115 bits (287), Expect = 3e-23
 Identities = 67/162 (41%), Positives = 92/162 (56%), Gaps = 1/162 (0%)
 Frame = +1

Query: 205 MGVVXXXXXXXXXXXXXXEKFAALHSPLKRPLILAFKTDKKKNI-LITPSEPIRIPVESP 381
           MGVV               KF+     LKRP I+AFK DK   I L+ P+E I +P+E+P
Sbjct: 1   MGVVSVSSSAARSPLGTSIKFSTQQFRLKRPSIVAFKADKPDKIALVAPTEKIPLPIETP 60

Query: 382 KESKRLRRSENKPAKRVKAVATDEAPFCTLDLDFNEAAVKLENLYNLSPPSDVSDLEDIG 561
           K+ ++ R    K +KRVKAV+ +EA  CTL++D+NEAA KLEN+Y LSP  D  + ED+ 
Sbjct: 61  KKHQKRRGRTTKSSKRVKAVSVEEAAPCTLEVDYNEAAAKLENIYKLSPAIDTFEAEDMD 120

Query: 562 SXXXXXXXXXXXXXGEGNKKDGKEVNDFVVRNPMKKAKRLNL 687
                         G+ NK + +   D VVRN +KK +RL+L
Sbjct: 121 GTMRRGSQRRRKINGDDNKLEERS-TDSVVRNRVKKVRRLDL 161


>ref|XP_008465379.1| PREDICTED: RNA polymerase sigma factor sigE,
           chloroplastic/mitochondrial [Cucumis melo]
          Length = 511

 Score =  114 bits (284), Expect = 8e-23
 Identities = 69/162 (42%), Positives = 91/162 (56%), Gaps = 1/162 (0%)
 Frame = +1

Query: 205 MGVVXXXXXXXXXXXXXXEKFAALHSPLKRPLILAFKTDKKKNI-LITPSEPIRIPVESP 381
           MGVV               KF+   S LKRP I+AFK DK  N  L++P E + +PVES 
Sbjct: 1   MGVVTVSSSAARTPFRLSAKFSNHGSTLKRPSIVAFKADKHTNTTLVSPHEQVTLPVESN 60

Query: 382 KESKRLRRSENKPAKRVKAVATDEAPFCTLDLDFNEAAVKLENLYNLSPPSDVSDLEDIG 561
             SK+   + +KP KRVKAV  DEA  C+LDLD+NEAA KLEN++ LSP ++ SD+E   
Sbjct: 61  NRSKKRSGNTSKPLKRVKAVLIDEATSCSLDLDYNEAAAKLENIFKLSPMTEDSDMES-- 118

Query: 562 SXXXXXXXXXXXXXGEGNKKDGKEVNDFVVRNPMKKAKRLNL 687
                          + +KK  K  +D +VRN  K+ KRL+L
Sbjct: 119 ------KDGRSKRGQQRSKKSDKRPSDGIVRNKTKRIKRLDL 154


>ref|XP_011007924.1| PREDICTED: RNA polymerase sigma factor sigE,
           chloroplastic/mitochondrial-like [Populus euphratica]
          Length = 513

 Score =  112 bits (281), Expect = 2e-22
 Identities = 68/162 (41%), Positives = 92/162 (56%), Gaps = 1/162 (0%)
 Frame = +1

Query: 205 MGVVXXXXXXXXXXXXXXEKFAALHSPLKRPLILAFKTDKK-KNILITPSEPIRIPVESP 381
           MG+V               KF    S  KRPLI+AFK DK  +  L+ P E I +P+E+ 
Sbjct: 1   MGIVSVSSSASWTPLGFSTKFTTCRSTAKRPLIVAFKADKSNETALVAPHEQIPLPIETT 60

Query: 382 KESKRLRRSENKPAKRVKAVATDEAPFCTLDLDFNEAAVKLENLYNLSPPSDVSDLEDIG 561
           KE KR  +S+ K + R+KAV T+ +P CTL +D+NEAA KLEN+Y LSP +D SD+ED+ 
Sbjct: 61  KEEKRHGKSK-KSSNRLKAVRTEVSP-CTLGVDYNEAAAKLENIYKLSPGTDTSDVEDV- 117

Query: 562 SXXXXXXXXXXXXXGEGNKKDGKEVNDFVVRNPMKKAKRLNL 687
           +              E  K+D    +  +VRN  KKAKRL+L
Sbjct: 118 NGVLRRCRQRKRKTSECEKEDDGRTSKIIVRNQAKKAKRLSL 159


>ref|XP_006376620.1| RNA polymerase sigma subunit SigE family protein [Populus
           trichocarpa] gi|550326141|gb|ERP54417.1| RNA polymerase
           sigma subunit SigE family protein [Populus trichocarpa]
          Length = 512

 Score =  112 bits (280), Expect = 2e-22
 Identities = 71/162 (43%), Positives = 92/162 (56%), Gaps = 1/162 (0%)
 Frame = +1

Query: 205 MGVVXXXXXXXXXXXXXXEKFAALHSPLKRPLILAFKTDKKKNI-LITPSEPIRIPVESP 381
           MGVV               KF+   S  KRPLI+AFK +K  N  L+ P E I +PVE+ 
Sbjct: 1   MGVVSVSSSASRTPLGLSTKFSTYGSTAKRPLIVAFKANKSNNTSLVAPHEQIPLPVETT 60

Query: 382 KESKRLRRSENKPAKRVKAVATDEAPFCTLDLDFNEAAVKLENLYNLSPPSDVSDLEDIG 561
           K  KRL +S+ K + R+KAV T+ +P CTL +D+NEAA KLEN+Y LSP +D SD+ED  
Sbjct: 61  KGKKRLGKSK-KSSNRLKAVRTEVSP-CTLLVDYNEAAAKLENIYKLSPGTDTSDVED-A 117

Query: 562 SXXXXXXXXXXXXXGEGNKKDGKEVNDFVVRNPMKKAKRLNL 687
           S              EG+K+        +VRN  KKAKRL+L
Sbjct: 118 SGVIRRGRQRKRKISEGDKETEDRTGKIIVRNRAKKAKRLSL 159


>gb|AKC88745.1| sigma factor [Melianthus villosus]
          Length = 513

 Score =  112 bits (279), Expect = 3e-22
 Identities = 68/136 (50%), Positives = 83/136 (61%), Gaps = 2/136 (1%)
 Frame = +1

Query: 286 LKRPLILAFKTDKKKNI-LITPSEPIRIPV-ESPKESKRLRRSENKPAKRVKAVATDEAP 459
           LKRPLI+AFKTDK  +I L+ P + I +PV  + K+ KRL R   KP+KR K V  DE+ 
Sbjct: 28  LKRPLIVAFKTDKINDIALVAPHDQIPLPVANAKKQQKRLGRG-TKPSKRTKVVYADESS 86

Query: 460 FCTLDLDFNEAAVKLENLYNLSPPSDVSDLEDIGSXXXXXXXXXXXXXGEGNKKDGKEVN 639
            CTL+LDFNEAA KLEN+Y LSPPSD SD+E   +               G+    K   
Sbjct: 87  PCTLELDFNEAAAKLENIYKLSPPSDTSDVE---NQDGLMDRGRRRRRNRGDDTTQKRTT 143

Query: 640 DFVVRNPMKKAKRLNL 687
           D VVRN  KK KRL+L
Sbjct: 144 DNVVRNQTKKVKRLSL 159


>ref|XP_011001910.1| PREDICTED: RNA polymerase sigma factor sigE,
           chloroplastic/mitochondrial [Populus euphratica]
          Length = 512

 Score =  112 bits (279), Expect = 3e-22
 Identities = 70/162 (43%), Positives = 92/162 (56%), Gaps = 1/162 (0%)
 Frame = +1

Query: 205 MGVVXXXXXXXXXXXXXXEKFAALHSPLKRPLILAFKTDKKKN-ILITPSEPIRIPVESP 381
           MGVV               KF+   S  KRPLI+AFK DK  N   + P E I +P+E+ 
Sbjct: 1   MGVVSVSSSASRTPLGLSTKFSTYGSTAKRPLIVAFKADKSSNPSFVAPHEQIPLPIETT 60

Query: 382 KESKRLRRSENKPAKRVKAVATDEAPFCTLDLDFNEAAVKLENLYNLSPPSDVSDLEDIG 561
           K  KRL +S+ K + R+KAV T+ +P CTL +D+NEAA KLEN+Y LSP +D SD+ED  
Sbjct: 61  KGKKRLGKSK-KSSNRLKAVRTEVSP-CTLLVDYNEAAAKLENIYKLSPGTDTSDVED-A 117

Query: 562 SXXXXXXXXXXXXXGEGNKKDGKEVNDFVVRNPMKKAKRLNL 687
           S              EG+K+     +  +VRN  KKAKRL+L
Sbjct: 118 SGVIRRGRQRKRKISEGDKEAEDRTSKIIVRNRAKKAKRLSL 159


>gb|AKC88740.1| sigma factor [Geranium maderense]
          Length = 526

 Score =  110 bits (276), Expect = 6e-22
 Identities = 62/134 (46%), Positives = 81/134 (60%), Gaps = 1/134 (0%)
 Frame = +1

Query: 289 KRPLILAFKTDKKKNI-LITPSEPIRIPVESPKESKRLRRSENKPAKRVKAVATDEAPFC 465
           KRPL++AFK DK   I L  P E I +P+E+PK  ++ R    K +KR+KAV  +EAP C
Sbjct: 29  KRPLVMAFKEDKHDKIALAVPCEKIPLPIETPKNQQKRRGRSTKTSKRIKAVTAEEAPPC 88

Query: 466 TLDLDFNEAAVKLENLYNLSPPSDVSDLEDIGSXXXXXXXXXXXXXGEGNKKDGKEVNDF 645
            L++D++EAA KLEN+Y  SP +D  D  D+ S              E N  DGK + D 
Sbjct: 89  NLEMDYSEAAAKLENIYKRSPTTD-DDSSDLDSSVRRRLERTR----EVNGDDGKGIADI 143

Query: 646 VVRNPMKKAKRLNL 687
           VVRN +KK KRLNL
Sbjct: 144 VVRNTVKKVKRLNL 157


>gb|AKC88728.1| sigma factor [California macrophylla]
          Length = 521

 Score =  110 bits (275), Expect = 8e-22
 Identities = 60/134 (44%), Positives = 84/134 (62%), Gaps = 1/134 (0%)
 Frame = +1

Query: 289 KRPLILAFKTDKKKNI-LITPSEPIRIPVESPKESKRLRRSENKPAKRVKAVATDEAPFC 465
           KRP I+AF  DK   I L+ P E I +P+E+PK+ ++ +    K +KRVKAV+ +EA  C
Sbjct: 29  KRPSIVAFIEDKHDKISLVAPHEKIPLPIETPKKQRKRQGRTTKTSKRVKAVSAEEASPC 88

Query: 466 TLDLDFNEAAVKLENLYNLSPPSDVSDLEDIGSXXXXXXXXXXXXXGEGNKKDGKEVNDF 645
            L++D++EAA KLEN+Y LSP +D S+ ED+               G+ +K + K   D 
Sbjct: 89  NLEVDYSEAAAKLENIYKLSPTTDYSEDEDLDGTMRRRLKRRRNVNGDDSKSE-KGTTDT 147

Query: 646 VVRNPMKKAKRLNL 687
           VVRNP+KK KRLNL
Sbjct: 148 VVRNPVKKVKRLNL 161


>gb|AKC88731.1| sigma factor [Erodium foetidum]
          Length = 506

 Score =  108 bits (270), Expect = 3e-21
 Identities = 62/134 (46%), Positives = 80/134 (59%), Gaps = 1/134 (0%)
 Frame = +1

Query: 289 KRPLILAFKTDKKKNI-LITPSEPIRIPVESPKESKRLRRSENKPAKRVKAVATDEAPFC 465
           KRPLILAFK DK   I L+ P E I +P+E+PK  ++ R    K +KRVKAV  +EA  C
Sbjct: 29  KRPLILAFKEDKHDKIALVAPHEKIPLPIETPKRQQKRRGRATKTSKRVKAVTAEEASPC 88

Query: 466 TLDLDFNEAAVKLENLYNLSPPSDVSDLEDIGSXXXXXXXXXXXXXGEGNKKDGKEVNDF 645
           +L +D++EAA KLEN+Y LSP +D S+ ED+                +G     K   D 
Sbjct: 89  SLQVDYSEAAAKLENIYKLSPTTDYSEDEDL----------------DGTITRSKGTTDT 132

Query: 646 VVRNPMKKAKRLNL 687
           VVRN +KK KRLNL
Sbjct: 133 VVRNQVKKVKRLNL 146


>ref|XP_011651413.1| PREDICTED: RNA polymerase sigma factor sigE,
           chloroplastic/mitochondrial [Cucumis sativus]
           gi|700202723|gb|KGN57856.1| hypothetical protein
           Csa_3G354500 [Cucumis sativus]
          Length = 547

 Score =  107 bits (266), Expect = 9e-21
 Identities = 67/162 (41%), Positives = 87/162 (53%), Gaps = 1/162 (0%)
 Frame = +1

Query: 205 MGVVXXXXXXXXXXXXXXEKFAALHSPLKRPLILAFKTDKKKNI-LITPSEPIRIPVESP 381
           MGVV               KF+   S LKRP I+AFK DK  N  L++P E + +PVES 
Sbjct: 1   MGVVTVSSAAARTPFRLGVKFSNHSSTLKRPSIVAFKADKHTNTTLVSPHEQVTLPVESN 60

Query: 382 KESKRLRRSENKPAKRVKAVATDEAPFCTLDLDFNEAAVKLENLYNLSPPSDVSDLEDIG 561
              K+   + +KP KRVKAV  DEA  C+LDLD+NEAA KLEN++ LSP ++ SD E   
Sbjct: 61  NRRKKRSGNTSKPLKRVKAVLIDEATPCSLDLDYNEAAAKLENIFKLSPMTEDSDKE--- 117

Query: 562 SXXXXXXXXXXXXXGEGNKKDGKEVNDFVVRNPMKKAKRLNL 687
                          + +KK      D +VRN  K+ KRL+L
Sbjct: 118 -----CKDGRSKRGQKRSKKSANRPGDGIVRNQTKRIKRLDL 154


>gb|AKC88746.1| sigma factor [Monsonia emarginata]
          Length = 513

 Score =  105 bits (261), Expect = 4e-20
 Identities = 59/134 (44%), Positives = 82/134 (61%), Gaps = 1/134 (0%)
 Frame = +1

Query: 289 KRPLILAFKTDKKKNI-LITPSEPIRIPVESPKESKRLRRSENKPAKRVKAVATDEAPFC 465
           +RP I+AFK DK   I L+ P E + +P+E+PK+ ++ R    K +KRVKAV+ +EA  C
Sbjct: 29  RRPSIVAFKEDKPNKISLVGPPEKLPLPIETPKKQQKKRGRGTKASKRVKAVSEEEASPC 88

Query: 466 TLDLDFNEAAVKLENLYNLSPPSDVSDLEDIGSXXXXXXXXXXXXXGEGNKKDGKEVNDF 645
           TL++D+NE A KLEN++ LSP +D S+ EDI               G   K + K+  D 
Sbjct: 89  TLEVDYNEEAAKLENIFKLSPATDCSEDEDIDGTMRRRLLRRRKVGGHDGKLE-KKTADN 147

Query: 646 VVRNPMKKAKRLNL 687
           VVRN  KK KRL+L
Sbjct: 148 VVRNQAKKVKRLDL 161


>ref|XP_007219010.1| hypothetical protein PRUPE_ppa004259mg [Prunus persica]
           gi|462415472|gb|EMJ20209.1| hypothetical protein
           PRUPE_ppa004259mg [Prunus persica]
          Length = 519

 Score =  104 bits (259), Expect = 6e-20
 Identities = 64/163 (39%), Positives = 86/163 (52%), Gaps = 2/163 (1%)
 Frame = +1

Query: 205 MGVVXXXXXXXXXXXXXXEKFAALHSPLKRPLILAFKTDK-KKNILITPSEPIRIPVESP 381
           MGVV               K     S L++PLI+AFKTD+  K  L+ P E I +P+E+ 
Sbjct: 1   MGVVTVSSSASRTPLGLSTKLTIQRSTLRKPLIVAFKTDEANKTALVAPQEKIPLPIETR 60

Query: 382 KESKRLRRSENKPAKRVKAVATDEAPFCTLDLDFNEAAVKLENLYNLSPPSDV-SDLEDI 558
           K+ ++      K AK VK+  TD A  CTL++D+NEAA KLENLY  SP ++  SD+ED+
Sbjct: 61  KKHQKRLGKARKLAKSVKSATTDVASPCTLEVDYNEAAAKLENLYKRSPETEANSDVEDV 120

Query: 559 GSXXXXXXXXXXXXXGEGNKKDGKEVNDFVVRNPMKKAKRLNL 687
                               KD    ++ VVRN  KKAKRL+L
Sbjct: 121 DGLMRRGRKRRKKTSESDADKDENRTSNTVVRNRTKKAKRLSL 163


>ref|XP_007219009.1| hypothetical protein PRUPE_ppa004259mg [Prunus persica]
           gi|462415471|gb|EMJ20208.1| hypothetical protein
           PRUPE_ppa004259mg [Prunus persica]
          Length = 390

 Score =  104 bits (259), Expect = 6e-20
 Identities = 64/163 (39%), Positives = 86/163 (52%), Gaps = 2/163 (1%)
 Frame = +1

Query: 205 MGVVXXXXXXXXXXXXXXEKFAALHSPLKRPLILAFKTDK-KKNILITPSEPIRIPVESP 381
           MGVV               K     S L++PLI+AFKTD+  K  L+ P E I +P+E+ 
Sbjct: 1   MGVVTVSSSASRTPLGLSTKLTIQRSTLRKPLIVAFKTDEANKTALVAPQEKIPLPIETR 60

Query: 382 KESKRLRRSENKPAKRVKAVATDEAPFCTLDLDFNEAAVKLENLYNLSPPSDV-SDLEDI 558
           K+ ++      K AK VK+  TD A  CTL++D+NEAA KLENLY  SP ++  SD+ED+
Sbjct: 61  KKHQKRLGKARKLAKSVKSATTDVASPCTLEVDYNEAAAKLENLYKRSPETEANSDVEDV 120

Query: 559 GSXXXXXXXXXXXXXGEGNKKDGKEVNDFVVRNPMKKAKRLNL 687
                               KD    ++ VVRN  KKAKRL+L
Sbjct: 121 DGLMRRGRKRRKKTSESDADKDENRTSNTVVRNRTKKAKRLSL 163


>ref|XP_010097858.1| RNA polymerase sigma factor rpoD [Morus notabilis]
           gi|587883538|gb|EXB72455.1| RNA polymerase sigma factor
           rpoD [Morus notabilis]
          Length = 517

 Score =  103 bits (257), Expect = 1e-19
 Identities = 69/165 (41%), Positives = 93/165 (56%), Gaps = 4/165 (2%)
 Frame = +1

Query: 205 MGVVXXXXXXXXXXXXXXEKFAALHSP-LKRPLILAFKTDKK-KNILITPSEPIRIPVES 378
           MGVV               KF++  S  LK+PLI+AFK DK  K +L+ P + I +PVE+
Sbjct: 1   MGVVTVSSSASRTPLGLSLKFSSNRSSVLKKPLIVAFKGDKSNKTVLVAPQDQIILPVET 60

Query: 379 PKESKRLRRSENKPAKRVKAVATDEAPFCTLDLDFNEAAVKLENLYNLSPPSDVSDLEDI 558
            KE K       K + RVKAVATDEA   T+++D+NEAA KLEN++ LS     +D+ED 
Sbjct: 61  RKEVKSRVGKAKKSSNRVKAVATDEASTSTMEVDYNEAAAKLENIFKLSS----ADVEDA 116

Query: 559 GSXXXXXXXXXXXXXGEGNKKDGKE--VNDFVVRNPMKKAKRLNL 687
                          GE +++ GK+   +D VVRN  KKAKRL+L
Sbjct: 117 VGLTSRGRRRRSKVIGESDERAGKKSTTSDTVVRNRKKKAKRLSL 161


>gb|AKC88747.1| sigma factor [Monsonia marlothii]
          Length = 514

 Score =  103 bits (256), Expect = 1e-19
 Identities = 59/135 (43%), Positives = 81/135 (60%), Gaps = 1/135 (0%)
 Frame = +1

Query: 286 LKRPLILAFKTDKKKNI-LITPSEPIRIPVESPKESKRLRRSENKPAKRVKAVATDEAPF 462
           +KR   +AFK D+   I L+ P E I +P+E+PK+ ++ R    K +KRVKAV+ DEA  
Sbjct: 28  IKRLSAVAFKEDRHDKIALVAPHEKIPLPIETPKKQQKRRGRPTKTSKRVKAVSVDEASP 87

Query: 463 CTLDLDFNEAAVKLENLYNLSPPSDVSDLEDIGSXXXXXXXXXXXXXGEGNKKDGKEVND 642
           CT ++D+NEAA KLEN+Y LSP +D S+ ED+                +   K GK   D
Sbjct: 88  CTSEVDYNEAAAKLENIYKLSPATDSSENEDLNGTMRTMEKRRKVNGDD--SKSGKPSID 145

Query: 643 FVVRNPMKKAKRLNL 687
            VVRN +KK KRL+L
Sbjct: 146 TVVRNRVKKIKRLDL 160


>gb|AKC88736.1| sigma factor [Erodium trifolium]
          Length = 518

 Score =  103 bits (256), Expect = 1e-19
 Identities = 64/162 (39%), Positives = 87/162 (53%), Gaps = 1/162 (0%)
 Frame = +1

Query: 205 MGVVXXXXXXXXXXXXXXEKFAALHSPLKRPLILAFKTDKKKNI-LITPSEPIRIPVESP 381
           MGVV               K +      KRPLI+AFK DK   I L+ P + I +P+E+P
Sbjct: 1   MGVVSVSSSAARSPLGMNIKISTARLRYKRPLIVAFKEDKHDKIPLVAPHDKIPLPIETP 60

Query: 382 KESKRLRRSENKPAKRVKAVATDEAPFCTLDLDFNEAAVKLENLYNLSPPSDVSDLEDIG 561
           K  ++ R    K +K VKAV  +EA  C+L++D++EAA KLE++Y LSP +D S+ ED+ 
Sbjct: 61  KRQQKRRGRAAKNSKSVKAVTAEEASPCSLEVDYSEAAAKLESIYKLSPTTDYSEDEDLD 120

Query: 562 SXXXXXXXXXXXXXGEGNKKDGKEVNDFVVRNPMKKAKRLNL 687
                           G+ K  K   D VVRN +KK KRLNL
Sbjct: 121 G----MIRRRRTKVNGGDCKSVKGTADTVVRNQVKKVKRLNL 158


>gb|KDO56129.1| hypothetical protein CISIN_1g010092mg [Citrus sinensis]
          Length = 518

 Score =  103 bits (256), Expect = 1e-19
 Identities = 60/137 (43%), Positives = 79/137 (57%), Gaps = 1/137 (0%)
 Frame = +1

Query: 280 SPLKRPLILAFKTDKKKN-ILITPSEPIRIPVESPKESKRLRRSENKPAKRVKAVATDEA 456
           S  KRPLI+AFK DK  N  L +P E I +P+E+PK  ++ R +  K  +RVK V +DEA
Sbjct: 24  STSKRPLIVAFKADKSNNQALFSPQEQIPLPIETPKRHQKRRENSRKRLERVKGVFSDEA 83

Query: 457 PFCTLDLDFNEAAVKLENLYNLSPPSDVSDLEDIGSXXXXXXXXXXXXXGEGNKKDGKEV 636
             CTLD+D+NEAA KLEN+Y LSP    S+++                 GE  KK     
Sbjct: 84  SPCTLDVDYNEAAAKLENIYKLSPAVTTSEVK-YADGVVKRGRQRRKRIGEVEKKSDDVS 142

Query: 637 NDFVVRNPMKKAKRLNL 687
              VVRN +K+ KRL+L
Sbjct: 143 GKPVVRNQVKRPKRLSL 159