BLASTX nr result

ID: Papaver29_contig00035101 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver29_contig00035101
         (507 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_010542529.1| PREDICTED: 30S ribosomal protein S10, chloro...    53   8e-06
ref|XP_006848986.2| PREDICTED: 30S ribosomal protein S10, chloro...    56   9e-06
gb|ERN10567.1| hypothetical protein AMTR_s00028p00072750 [Ambore...    56   9e-06

>ref|XP_010542529.1| PREDICTED: 30S ribosomal protein S10, chloroplastic-like isoform X2
           [Tarenaya hassleriana]
          Length = 196

 Score = 52.8 bits (125), Expect(2) = 8e-06
 Identities = 25/36 (69%), Positives = 29/36 (80%)
 Frame = -1

Query: 108 RSYYVPLIEESCKLTKDAAKTSNMKTMCPVYLPTKK 1
           RSY+VPLIE+SCK   DAA+ +N KTM PV LPTKK
Sbjct: 105 RSYWVPLIEDSCKQILDAARNTNAKTMGPVPLPTKK 140



 Score = 23.5 bits (49), Expect(2) = 8e-06
 Identities = 14/30 (46%), Positives = 17/30 (56%)
 Frame = -3

Query: 196 SEIHGTPKISIEDDCIDKMKLTPKIRIKLK 107
           SE+     IS E   +DKM    KIRIKL+
Sbjct: 79  SEVPSASSISAE---VDKMAPKQKIRIKLR 105


>ref|XP_006848986.2| PREDICTED: 30S ribosomal protein S10, chloroplastic [Amborella
           trichopoda]
          Length = 209

 Score = 56.2 bits (134), Expect = 9e-06
 Identities = 27/36 (75%), Positives = 30/36 (83%)
 Frame = -1

Query: 108 RSYYVPLIEESCKLTKDAAKTSNMKTMCPVYLPTKK 1
           RSY+VPLIE+SCK   DAAKT+N KTM PV LPTKK
Sbjct: 118 RSYWVPLIEDSCKQIMDAAKTTNAKTMGPVPLPTKK 153


>gb|ERN10567.1| hypothetical protein AMTR_s00028p00072750 [Amborella trichopoda]
          Length = 103

 Score = 56.2 bits (134), Expect = 9e-06
 Identities = 27/36 (75%), Positives = 30/36 (83%)
 Frame = -1

Query: 108 RSYYVPLIEESCKLTKDAAKTSNMKTMCPVYLPTKK 1
           RSY+VPLIE+SCK   DAAKT+N KTM PV LPTKK
Sbjct: 12  RSYWVPLIEDSCKQIMDAAKTTNAKTMGPVPLPTKK 47