BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver29_contig00034199
         (860 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_010249185.1| PREDICTED: RNA polymerase II C-terminal doma...   228   6e-57
ref|XP_010100046.1| RNA polymerase II C-terminal domain phosphat...   141   5e-31
ref|XP_007043830.1| RNA polymerase II C-terminal domain phosphat...   140   2e-30
ref|XP_004310239.2| PREDICTED: RNA polymerase II C-terminal doma...   133   2e-28
ref|XP_010656789.1| PREDICTED: RNA polymerase II C-terminal doma...   133   2e-28
ref|XP_010656786.1| PREDICTED: RNA polymerase II C-terminal doma...   132   3e-28
emb|CBI35661.3| unnamed protein product [Vitis vinifera]              132   4e-28
ref|XP_010929653.1| PREDICTED: RNA polymerase II C-terminal doma...   129   3e-27
ref|XP_010656784.1| PREDICTED: RNA polymerase II C-terminal doma...   129   3e-27
ref|XP_007225412.1| hypothetical protein PRUPE_ppa000589mg [Prun...   129   4e-27
ref|XP_008791049.1| PREDICTED: RNA polymerase II C-terminal doma...   127   8e-27
ref|XP_012459418.1| PREDICTED: RNA polymerase II C-terminal doma...   127   1e-26
gb|KJB77193.1| hypothetical protein B456_012G125200 [Gossypium r...   127   1e-26
gb|KJB77192.1| hypothetical protein B456_012G125200 [Gossypium r...   127   1e-26
ref|XP_012459417.1| PREDICTED: RNA polymerase II C-terminal doma...   127   1e-26
ref|XP_011020855.1| PREDICTED: RNA polymerase II C-terminal doma...   125   3e-26
gb|KHG21997.1| RNA polymerase II C-terminal domain phosphatase-l...   125   5e-26
ref|XP_011656791.1| PREDICTED: RNA polymerase II C-terminal doma...   125   5e-26
ref|XP_008222368.1| PREDICTED: RNA polymerase II C-terminal doma...   124   1e-25
ref|XP_012088736.1| PREDICTED: RNA polymerase II C-terminal doma...   124   1e-25

>ref|XP_010249185.1| PREDICTED: RNA polymerase II C-terminal domain phosphatase-like 3
            [Nelumbo nucifera]
          Length = 1313

 Score =  228 bits (580), Expect = 6e-57
 Identities = 147/297 (49%), Positives = 174/297 (58%), Gaps = 17/297 (5%)
 Frame = -1

Query: 842  RSSDPRKFGNGEVVLGQRQDNGGRNLTAGAGGQEQLSLIGNGNMGSLPSPLKDIAVNP-M 666
            R SDPRK G+GE   G +QD G        GG EQL+  G G+  SLPS LKDIAVNP M
Sbjct: 680  RESDPRKLGSGEASFGNKQDTGCSTYNVTTGGNEQLTASGIGSTVSLPSLLKDIAVNPTM 739

Query: 665  LISLL-LEHQR-----LQKSNNSPQNLVTSSSLNGFPGSIPMANIPSSKSSEIDQKYSVK 504
            L+ L+ +EHQR     LQK  N  Q+ + SSS +  PG I   NI S   SE ++K +  
Sbjct: 740  LMHLIKMEHQRLAVEALQKCGNPAQSTMQSSSSSVMPGKIASVNIASKTLSEPEKKSAGN 799

Query: 503  PQVPGQAIST---GDSGKTRMKLRDPRLAARMNTCQKNESLGPLEQLKTFGAPSSLTQDS 333
             Q+  Q  S    GD GK RMK RDPR     NT QK++S GP E+ K  G PS  T   
Sbjct: 800  SQISVQTASMIPHGDLGKIRMKPRDPRRILHSNTFQKSDSSGP-ERFKANGTPSPNTPTC 858

Query: 332  RENLIVRQQSVQAQTNSVPS---GAPDIFQQFTKELKSLADILSASQA---PSVVPLTVS 171
            R+NLIVRQQ  QAQTNS+ S     PDI QQFTK+LK++A+ILSASQA   PSVVP T+S
Sbjct: 859  RDNLIVRQQGEQAQTNSLLSQSTAPPDIAQQFTKKLKNIANILSASQAINTPSVVPQTIS 918

Query: 170  SPIIPXXXXXXXXXXXXXXXKDQESGTVTAPVERIVQP-TQNTWGDVEHLLEGYDDQ 3
            S  +P                DQ S +   P ER   P +QN WGDVEHL EGYDDQ
Sbjct: 919  SQPVPAKMDKVDMKVVATDSNDQRSWSALTPEERAAGPSSQNAWGDVEHLFEGYDDQ 975


>ref|XP_010100046.1| RNA polymerase II C-terminal domain phosphatase-like 3 [Morus
            notabilis] gi|587892642|gb|EXB81217.1| RNA polymerase II
            C-terminal domain phosphatase-like 3 [Morus notabilis]
          Length = 1301

 Score =  141 bits (356), Expect = 5e-31
 Identities = 108/300 (36%), Positives = 149/300 (49%), Gaps = 22/300 (7%)
 Frame = -1

Query: 836  SDPRK---FGNGEVVLGQRQDNGGRNLTAGAGGQEQLSLIGNGNMGSLPSPLKDIAVNPM 666
            +DPRK     NG ++      N G N+     G+EQ+ + G     +LP+ LKDIAVNP 
Sbjct: 660  ADPRKSIHLVNGPIM------NNGPNI-----GKEQVPVTGTSTPDALPAILKDIAVNPT 708

Query: 665  LISLLLE---HQRL-----QKSNNSPQNLVTSSSLNGFPGSIPMANIPSSKSSEIDQKYS 510
            +   +L     Q+L     Q+ ++S +N       N   G+ P+ N+  SK+S I Q  +
Sbjct: 709  IFMDILNKLGQQQLLAADAQQKSDSSKNTTHPPGTNSILGAAPLVNVAPSKASGILQTPA 768

Query: 509  VKPQVPGQAISTG---DSGKTRMKLRDPRLAARMNTCQKNESLGPLEQLKTFGAPSSLTQ 339
            V      Q  +     + GK RMK RDPR     N  QK+ SLG  EQ K   +  S T 
Sbjct: 769  VSLPTTSQVATASMQDELGKIRMKPRDPRRVLHGNMLQKSWSLGH-EQFKPIVSSVSCTP 827

Query: 338  DSRENLIVRQQSVQAQTNSVPSGA---PDIFQQFTKELKSLADILSASQA---PSVVPLT 177
             +++NL    Q  QA    VPS     PDI +QFTK L+++AD++S SQA   P+ V   
Sbjct: 828  GNKDNLNGPVQEGQADKKQVPSQLVVQPDIARQFTKNLRNIADLMSVSQASTSPATVSQN 887

Query: 176  VSSPIIPXXXXXXXXXXXXXXXKDQESGTVTAPVERIVQP--TQNTWGDVEHLLEGYDDQ 3
            +SS  +P               +DQ SGT + P   +  P  T N WGDVEHL EGYDD+
Sbjct: 888  LSSQPLPVKPDRGDVKAVVPNSEDQHSGTNSTPETTLAVPSRTPNAWGDVEHLFEGYDDE 947


>ref|XP_007043830.1| RNA polymerase II C-terminal domain phosphatase-like 3, putative
            [Theobroma cacao] gi|508707765|gb|EOX99661.1| RNA
            polymerase II C-terminal domain phosphatase-like 3,
            putative [Theobroma cacao]
          Length = 1290

 Score =  140 bits (352), Expect = 2e-30
 Identities = 118/308 (38%), Positives = 159/308 (51%), Gaps = 22/308 (7%)
 Frame = -1

Query: 860  QVGESIRSSDPRKFGNGEVVLGQRQDNGGRNLTAGAGGQEQLSLIGNGNMGSLPSPLKDI 681
            Q  E++ S+  RK  NG  V      +G  N+T G   Q  ++   + +  SLP+ LKDI
Sbjct: 655  QTAENLESNS-RKMDNG--VTSSSTLSGKTNITVGTNEQVPVT---STSTPSLPALLKDI 708

Query: 680  AVNP-MLISLLL--EHQRL-----QKSNNSPQNLVTSSSLNGFPGSIPMANIPSSKS--- 534
            AVNP MLI++L   + QRL     QKS +  ++     S N   G +   N+  S S   
Sbjct: 709  AVNPTMLINILKMGQQQRLGAEAQQKSPDPVKSTFHQPSSNSLLGVVSSTNVIPSPSVNN 768

Query: 533  -SEIDQKYSVKPQVPGQAISTGDSGKTRMKLRDPRLAARMNTCQKNESLGPLEQLKTFGA 357
               I    S KP    Q  S  +SGK RMK RDPR     N+ Q++ S+G L+QLKT GA
Sbjct: 769  VPSISSGISSKPAGNLQVPSPDESGKIRMKPRDPRRVLHGNSLQRSGSMG-LDQLKTNGA 827

Query: 356  PSSLTQDSRENLIVRQQSVQAQTNSVPSGA-----PDIFQQFTKELKSLADILSASQAPS 192
             +S TQ S++NL    Q + +QT S P  +     PDI QQFT  LK++ADI+S SQA +
Sbjct: 828  LTSSTQGSKDNL--NAQKLDSQTESKPMQSQLVPPPDITQQFTNNLKNIADIMSVSQALT 885

Query: 191  VVPLTVSSPIIP----XXXXXXXXXXXXXXXKDQESGTVTAPVERIVQP-TQNTWGDVEH 27
             +P  VS  ++P                   +DQ++G   AP      P +QN WGDVEH
Sbjct: 886  SLP-PVSHNLVPQPVLIKSDSMDMKALVSNSEDQQTGAGLAPEAGATGPRSQNAWGDVEH 944

Query: 26   LLEGYDDQ 3
            L E YDDQ
Sbjct: 945  LFERYDDQ 952


>ref|XP_004310239.2| PREDICTED: RNA polymerase II C-terminal domain phosphatase-like 3
            [Fragaria vesca subsp. vesca]
          Length = 1244

 Score =  133 bits (334), Expect = 2e-28
 Identities = 99/290 (34%), Positives = 149/290 (51%), Gaps = 10/290 (3%)
 Frame = -1

Query: 842  RSSDPRKFGNGEVVLGQRQDNGGRNLTAGAGGQEQLSLIGNGNMGSLPSPLKDIAVNPML 663
            + +DPRK  N     G  + N     TA     E++ L+   ++ SLP+  KDIAVNP +
Sbjct: 630  KEADPRKMVNVSSSPGTVEGNSNGQNTAN----EKVPLVAP-SLVSLPAIFKDIAVNPTM 684

Query: 662  ISLLLEHQRLQKSNNSP---QNLVTSSSLNGFPGSIPMANIPSSKSSEIDQKYSVKPQVP 492
            +  +L+    Q++  +P   ++L    S +  PG+  + N PS  S  +     + P + 
Sbjct: 685  LVNILKLAEAQQNAAAPARKESLTYPPSSSSIPGTAALVNDPSKTSGAL-----LTPTIC 739

Query: 491  GQAISTGDSGKTRMKLRDPRLAARMNTCQKNESLGPLEQLKTFGAPSSLTQDSRENLIVR 312
             Q   T ++GK RMKLRDPR     N  Q + S+G  EQ +    P S +Q + +++  +
Sbjct: 740  SQKTPTDEAGKIRMKLRDPRRLLHGNALQNSGSVGH-EQSRNIVPPLSSSQANNDDMNGK 798

Query: 311  QQSVQAQTNSVPS-----GAPDIFQQFTKELKSLADILSASQAPSVVPLTVSSPIIPXXX 147
            +Q  QA  NSV S     GAPDI  QFTK LK++ADI+S SQ  S  P T S   +    
Sbjct: 799  KQDSQADNNSVTSQSGALGAPDIASQFTKNLKNIADIISVSQV-STSPATPSQN-LSTEL 856

Query: 146  XXXXXXXXXXXXKDQESGTVTAPVERIVQPTQN--TWGDVEHLLEGYDDQ 3
                        ++Q +G+++A V      +++  TWGDVEHL EGYDD+
Sbjct: 857  ISINPDNVDLKAEEQHTGSISASVPTAAGASRSPATWGDVEHLFEGYDDK 906


>ref|XP_010656789.1| PREDICTED: RNA polymerase II C-terminal domain phosphatase-like 3
            isoform X3 [Vitis vinifera]
          Length = 1273

 Score =  133 bits (334), Expect = 2e-28
 Identities = 101/285 (35%), Positives = 135/285 (47%), Gaps = 7/285 (2%)
 Frame = -1

Query: 836  SDPRKFGNGEVVLGQRQDNGGRNLTAGAGGQEQLSLIGNGNMGSLPSPLKDIAVNPMLIS 657
            +DP+K  +   V G   D           G E L ++      SL S LKDIAVNP +  
Sbjct: 672  TDPKKLESKVTVTGIGCDKP----YVTVNGNEHLPVVATSTTASLQSLLKDIAVNPAVWM 727

Query: 656  LLLEHQRLQKSNNSPQNLVTSSSLNGFPGSIPMANIPSSKSSEIDQKYSVKPQVPGQAIS 477
             +      QKS +  +N V   + N   G +P A++   K S + QK +   QVP Q   
Sbjct: 728  NIFNKVEQQKSGDPAKNTVLPPTSNSILGVVPPASVAPLKPSALGQKPAGALQVP-QTGP 786

Query: 476  TGDSGKTRMKLRDPRLAARMNTCQKNESLGPLEQLKTFGAPSSLTQDSRENLIVRQQSVQ 297
              +SGK RMK RDPR     N+ Q++ S G  EQ KT                 ++Q  Q
Sbjct: 787  MDESGKVRMKPRDPRRILHANSFQRSGSSGS-EQFKT---------------NAQKQEDQ 830

Query: 296  AQTNSVPS---GAPDIFQQFTKELKSLADILSASQAPSVVPL---TVSSPIIPXXXXXXX 135
             +T SVPS     PDI QQFTK LK++AD++SASQA S+ P     +SS  +        
Sbjct: 831  TETKSVPSHSVNPPDISQQFTKNLKNIADLMSASQASSMTPTFPQILSSQSVQVNTDRMD 890

Query: 134  XXXXXXXXKDQESGTVTAPVERIVQP-TQNTWGDVEHLLEGYDDQ 3
                     DQ +   + P      P ++NTWGDVEHL +GYDDQ
Sbjct: 891  VKATVSDSGDQLTANGSKPESAAGPPQSKNTWGDVEHLFDGYDDQ 935


>ref|XP_010656786.1| PREDICTED: RNA polymerase II C-terminal domain phosphatase-like 3
            isoform X2 [Vitis vinifera]
          Length = 1276

 Score =  132 bits (333), Expect = 3e-28
 Identities = 101/287 (35%), Positives = 135/287 (47%), Gaps = 9/287 (3%)
 Frame = -1

Query: 836  SDPRKFGNGEVVLGQRQDNGGRNLTAGAGGQEQLSLIGNGNMGSLPSPLKDIAVNPMLIS 657
            +DP+K  +   V G   D           G E L ++      SL S LKDIAVNP +  
Sbjct: 672  TDPKKLESKVTVTGIGCDKP----YVTVNGNEHLPVVATSTTASLQSLLKDIAVNPAVWM 727

Query: 656  LLLEHQRLQKSNNSPQNLVTSSSLNGFPGSIPMANIPSSKSSEIDQKYSVKPQVP--GQA 483
             +      QKS +  +N V   + N   G +P A++   K S + QK +   QVP  G  
Sbjct: 728  NIFNKVEQQKSGDPAKNTVLPPTSNSILGVVPPASVAPLKPSALGQKPAGALQVPQTGPM 787

Query: 482  ISTGDSGKTRMKLRDPRLAARMNTCQKNESLGPLEQLKTFGAPSSLTQDSRENLIVRQQS 303
                +SGK RMK RDPR     N+ Q++ S G  EQ KT                 ++Q 
Sbjct: 788  NPQDESGKVRMKPRDPRRILHANSFQRSGSSGS-EQFKT---------------NAQKQE 831

Query: 302  VQAQTNSVPS---GAPDIFQQFTKELKSLADILSASQAPSVVPL---TVSSPIIPXXXXX 141
             Q +T SVPS     PDI QQFTK LK++AD++SASQA S+ P     +SS  +      
Sbjct: 832  DQTETKSVPSHSVNPPDISQQFTKNLKNIADLMSASQASSMTPTFPQILSSQSVQVNTDR 891

Query: 140  XXXXXXXXXXKDQESGTVTAPVERIVQP-TQNTWGDVEHLLEGYDDQ 3
                       DQ +   + P      P ++NTWGDVEHL +GYDDQ
Sbjct: 892  MDVKATVSDSGDQLTANGSKPESAAGPPQSKNTWGDVEHLFDGYDDQ 938


>emb|CBI35661.3| unnamed protein product [Vitis vinifera]
          Length = 1184

 Score =  132 bits (331), Expect = 4e-28
 Identities = 95/258 (36%), Positives = 126/258 (48%), Gaps = 9/258 (3%)
 Frame = -1

Query: 749  GQEQLSLIGNGNMGSLPSPLKDIAVNPMLISLLLEHQRLQKSNNSPQNLVTSSSLNGFPG 570
            G E L ++      SL S LKDIAVNP +   +      QKS +  +N V   + N   G
Sbjct: 605  GNEHLPVVATSTTASLQSLLKDIAVNPAVWMNIFNKVEQQKSGDPAKNTVLPPTSNSILG 664

Query: 569  SIPMANIPSSKSSEIDQKYSVKPQVP--GQAISTGDSGKTRMKLRDPRLAARMNTCQKNE 396
             +P A++   K S + QK +   QVP  G      +SGK RMK RDPR     N+ Q++ 
Sbjct: 665  VVPPASVAPLKPSALGQKPAGALQVPQTGPMNPQDESGKVRMKPRDPRRILHANSFQRSG 724

Query: 395  SLGPLEQLKTFGAPSSLTQDSRENLIVRQQSVQAQTNSVPS---GAPDIFQQFTKELKSL 225
            S G  EQ KT                 ++Q  Q +T SVPS     PDI QQFTK LK++
Sbjct: 725  SSGS-EQFKT---------------NAQKQEDQTETKSVPSHSVNPPDISQQFTKNLKNI 768

Query: 224  ADILSASQAPSVVPL---TVSSPIIPXXXXXXXXXXXXXXXKDQESGTVTAPVERIVQP- 57
            AD++SASQA S+ P     +SS  +                 DQ +   + P      P 
Sbjct: 769  ADLMSASQASSMTPTFPQILSSQSVQVNTDRMDVKATVSDSGDQLTANGSKPESAAGPPQ 828

Query: 56   TQNTWGDVEHLLEGYDDQ 3
            ++NTWGDVEHL +GYDDQ
Sbjct: 829  SKNTWGDVEHLFDGYDDQ 846


>ref|XP_010929653.1| PREDICTED: RNA polymerase II C-terminal domain phosphatase-like 3
            [Elaeis guineensis]
          Length = 1268

 Score =  129 bits (324), Expect = 3e-27
 Identities = 96/249 (38%), Positives = 129/249 (51%), Gaps = 14/249 (5%)
 Frame = -1

Query: 707  SLPSPLKDIAVNP-MLISLL-LEHQRL-----QKSNNSPQNLVTSSSLNGFPGSIPMANI 549
            S PS LKDIAVNP ML+ L+ +E QRL     QK+    QN+  +SSLN   G++  A +
Sbjct: 691  SFPSLLKDIAVNPTMLMQLIQMEQQRLSAEAQQKTVGLMQNMAHASSLNVLSGAVSSATV 750

Query: 548  PSSKSSEIDQKYSVKPQVPGQAIST---GDSGKTRMKLRDPRLAARMNTCQKNESLGPLE 378
             S KS+E+ Q    +PQVP Q +ST    D G+ RMK RDPR     N  QKNE++   E
Sbjct: 751  ASMKSTEVGQNPGGRPQVPPQTVSTNSQSDVGRIRMKPRDPRRVLH-NMVQKNETV-VSE 808

Query: 377  QLKTFGAPSSLTQDSRENLIVRQQSVQAQTNSVPSGAPDIFQQFTKELKSLADILSASQA 198
            + K  G  SS  Q S++   + +Q  QAQ  ++P+      QQF K  K+L DI S  Q+
Sbjct: 809  RAKPNGTLSSDPQSSKDQSAIGEQGEQAQATTLPT------QQFAKNTKNLGDISSTLQS 862

Query: 197  PSVVPLT---VSSPIIPXXXXXXXXXXXXXXXKDQESGTVTAPVERI-VQPTQNTWGDVE 30
             +  P     +S PI                   +    VT+        P+ N WGDV+
Sbjct: 863  TTTPPAASQIISQPIQLKINKVDPRPAAAVVSDPKTLSAVTSEGSTTGATPSTNPWGDVD 922

Query: 29   HLLEGYDDQ 3
            HLL+GYDDQ
Sbjct: 923  HLLDGYDDQ 931


>ref|XP_010656784.1| PREDICTED: RNA polymerase II C-terminal domain phosphatase-like 3
            isoform X1 [Vitis vinifera]
          Length = 1285

 Score =  129 bits (324), Expect = 3e-27
 Identities = 102/296 (34%), Positives = 137/296 (46%), Gaps = 18/296 (6%)
 Frame = -1

Query: 836  SDPRKFGNGEVVLGQRQDNGGRNLTAGAGGQEQLSLIGNGNMGSLPSPLKDIAVNPMLIS 657
            +DP+K  +   V G   D           G E L ++      SL S LKDIAVNP +  
Sbjct: 672  TDPKKLESKVTVTGIGCDKP----YVTVNGNEHLPVVATSTTASLQSLLKDIAVNPAVWM 727

Query: 656  LLLEHQRLQKSNNSPQNLVTSSSLNGFPGSIPMANIPSSKSSEIDQKYSVKPQVP--GQA 483
             +      QKS +  +N V   + N   G +P A++   K S + QK +   QVP  G  
Sbjct: 728  NIFNKVEQQKSGDPAKNTVLPPTSNSILGVVPPASVAPLKPSALGQKPAGALQVPQTGPM 787

Query: 482  ISTG---------DSGKTRMKLRDPRLAARMNTCQKNESLGPLEQLKTFGAPSSLTQDSR 330
            + T          +SGK RMK RDPR     N+ Q++ S G  EQ KT            
Sbjct: 788  LVTSCNNAQNPQDESGKVRMKPRDPRRILHANSFQRSGSSGS-EQFKT------------ 834

Query: 329  ENLIVRQQSVQAQTNSVPS---GAPDIFQQFTKELKSLADILSASQAPSVVPL---TVSS 168
                 ++Q  Q +T SVPS     PDI QQFTK LK++AD++SASQA S+ P     +SS
Sbjct: 835  ---NAQKQEDQTETKSVPSHSVNPPDISQQFTKNLKNIADLMSASQASSMTPTFPQILSS 891

Query: 167  PIIPXXXXXXXXXXXXXXXKDQESGTVTAPVERIVQP-TQNTWGDVEHLLEGYDDQ 3
              +                 DQ +   + P      P ++NTWGDVEHL +GYDDQ
Sbjct: 892  QSVQVNTDRMDVKATVSDSGDQLTANGSKPESAAGPPQSKNTWGDVEHLFDGYDDQ 947


>ref|XP_007225412.1| hypothetical protein PRUPE_ppa000589mg [Prunus persica]
            gi|462422348|gb|EMJ26611.1| hypothetical protein
            PRUPE_ppa000589mg [Prunus persica]
          Length = 1085

 Score =  129 bits (323), Expect = 4e-27
 Identities = 98/269 (36%), Positives = 139/269 (51%), Gaps = 13/269 (4%)
 Frame = -1

Query: 770  NLTAGAGGQEQLSLIGNGNMGSLPSPLKDIAVNP-MLISLLL--EHQRL-----QKSNNS 615
            N        E +SL+G  +M SLP  LKDIAVNP ML++LL   + QR+     QKS + 
Sbjct: 489  NTNGPNSANEHVSLMG-ASMASLPELLKDIAVNPTMLLNLLKMGQQQRVASEAHQKSADP 547

Query: 614  PQNLVTSSSLNGFPGSIPMANIPSSKSSEIDQKYSVKPQVPGQAISTGDSGKTRMKLRDP 435
            P+ +   +S +    S  + N+PS  S  +       P V  Q     +SGK RMK RDP
Sbjct: 548  PKTMTHPTSSSSILVSAALGNVPSKTSGILQTPAGTLP-VSSQKALMDESGKVRMKPRDP 606

Query: 434  RLAARMNTCQKNESLGPLEQLKTFGAPSSLTQDSRENLIVRQQSVQAQTNSVPSGAPDIF 255
            R A   N  QK+ SLG  EQ +    P S  Q +++NL    Q+ +    S    APDI 
Sbjct: 607  RRALHGNALQKSGSLGQ-EQFRNIIPPLSAIQGNKDNL--NGQADKKLVTSQSLDAPDIT 663

Query: 254  QQFTKELKSLADILSASQ---APSVVPLTVSSPIIPXXXXXXXXXXXXXXXKDQESGTVT 84
            +QFTK LK++ADI+S S    +P++   +VSS ++P               ++Q   +++
Sbjct: 664  RQFTKNLKNIADIMSVSNVSTSPAIASQSVSSQLVP-----IKPERIDLKPEEQRPESIS 718

Query: 83   APVERIVQPTQN--TWGDVEHLLEGYDDQ 3
            A       P+++   WGDVEHL EGYDDQ
Sbjct: 719  ASEAAAAGPSRSPVMWGDVEHLFEGYDDQ 747


>ref|XP_008791049.1| PREDICTED: RNA polymerase II C-terminal domain phosphatase-like 3
            [Phoenix dactylifera]
          Length = 1269

 Score =  127 bits (320), Expect = 8e-27
 Identities = 96/249 (38%), Positives = 128/249 (51%), Gaps = 14/249 (5%)
 Frame = -1

Query: 707  SLPSPLKDIAVNP-MLISLL-LEHQRL-----QKSNNSPQNLVTSSSLNGFPGSIPMANI 549
            S PS LKDIAVNP ML+ L+ +E QRL     QK+     N+  +SSLN  PG++  AN+
Sbjct: 692  SFPSLLKDIAVNPTMLMQLIQIEQQRLSAEAQQKTVGLMHNMAHASSLNVLPGAVSSANV 751

Query: 548  PSSKSSEIDQKYSVKPQVPGQAIST---GDSGKTRMKLRDPRLAARMNTCQKNESLGPLE 378
             S KS+E+    S +PQV  Q +ST    D G+ RMK RDPR     N  QKNE++   E
Sbjct: 752  ASMKSAEVGHNPSGRPQVTAQTVSTNSQSDVGRIRMKPRDPRRILH-NMVQKNETI-VSE 809

Query: 377  QLKTFGAPSSLTQDSRENLIVRQQSVQAQTNSVPSGAPDIFQQFTKELKSLADILSASQ- 201
            + K  G  SS  Q S+++L + +Q  QAQ   +P+       Q  K  K+L DI S  Q 
Sbjct: 810  RAKPNGTLSSDPQSSKDHLAIGEQGEQAQATGLPT------LQLAKNPKNLGDISSPLQL 863

Query: 200  --APSVVPLTVSSPIIPXXXXXXXXXXXXXXXKDQESGTVTAP-VERIVQPTQNTWGDVE 30
               P  VP  +S PI                   +   TV +     +   + N WGDV+
Sbjct: 864  TTTPLAVPQIISQPIQFNINKVDLRPAAAVVNDPKTLSTVASEGSTTVATQSTNAWGDVD 923

Query: 29   HLLEGYDDQ 3
            HLL+GYDDQ
Sbjct: 924  HLLDGYDDQ 932


>ref|XP_012459418.1| PREDICTED: RNA polymerase II C-terminal domain phosphatase-like 3
            isoform X2 [Gossypium raimondii]
          Length = 1251

 Score =  127 bits (319), Expect = 1e-26
 Identities = 109/272 (40%), Positives = 146/272 (53%), Gaps = 25/272 (9%)
 Frame = -1

Query: 743  EQLSLIGNGNMGSLPSPLKDIAVNP-MLISLLL--EHQRL-----QKSNNSPQNLVTSSS 588
            EQ+ L G  N  SLP+ LKDIAVNP MLI++L   + QRL     QK+ +  +N +   S
Sbjct: 647  EQVPLTGMSNP-SLPALLKDIAVNPTMLINILKMGQQQRLPSESQQKTPDPLKNTLYQPS 705

Query: 587  LNGFPGSIPMANIPSSKSSEIDQKYSV----KPQVPGQAISTGDSGKTRMKLRDPRLAAR 420
             N   G IP AN+  S S  +    S     KP    Q     +S K RMK RDPR    
Sbjct: 706  SNPVLGVIPPANVIPSPSVNVVPSSSSGTLSKPAGNLQGPPLDESCKIRMKPRDPRRVLH 765

Query: 419  MNTCQKNESLGPLEQLKTFG-APSSLTQDSRENLIVRQQ---SVQA---QTNSVPSGAPD 261
             N  QK+ S+GP +QLKT G +P+S TQ S++N+  ++Q    ++A   Q   VP   PD
Sbjct: 766  GNVLQKSGSVGP-DQLKTNGTSPASSTQGSKDNMNAQKQLENQIEAKPIQCQFVP--PPD 822

Query: 260  IFQQFTKELKSLADILSASQA----PSVVPLTVSSPIIPXXXXXXXXXXXXXXXKDQESG 93
            I QQFT+ LK++A ++S  Q+    P+V    VS P I                +DQ++G
Sbjct: 823  IAQQFTQSLKNIAGMMSGPQSFAGLPAVSQNLVSQP-IQVKSETADKNTKGSNSEDQQTG 881

Query: 92   TVTAPVERIV--QPTQNTWGDVEHLLEGYDDQ 3
            T TAP   +    P+QN WGDVEHL E YDD+
Sbjct: 882  TGTAPEAGVTCPPPSQNAWGDVEHLFEKYDDR 913


>gb|KJB77193.1| hypothetical protein B456_012G125200 [Gossypium raimondii]
          Length = 982

 Score =  127 bits (319), Expect = 1e-26
 Identities = 109/272 (40%), Positives = 146/272 (53%), Gaps = 25/272 (9%)
 Frame = -1

Query: 743  EQLSLIGNGNMGSLPSPLKDIAVNP-MLISLLL--EHQRL-----QKSNNSPQNLVTSSS 588
            EQ+ L G  N  SLP+ LKDIAVNP MLI++L   + QRL     QK+ +  +N +   S
Sbjct: 378  EQVPLTGMSNP-SLPALLKDIAVNPTMLINILKMGQQQRLPSESQQKTPDPLKNTLYQPS 436

Query: 587  LNGFPGSIPMANIPSSKSSEIDQKYSV----KPQVPGQAISTGDSGKTRMKLRDPRLAAR 420
             N   G IP AN+  S S  +    S     KP    Q     +S K RMK RDPR    
Sbjct: 437  SNPVLGVIPPANVIPSPSVNVVPSSSSGTLSKPAGNLQGPPLDESCKIRMKPRDPRRVLH 496

Query: 419  MNTCQKNESLGPLEQLKTFG-APSSLTQDSRENLIVRQQ---SVQA---QTNSVPSGAPD 261
             N  QK+ S+GP +QLKT G +P+S TQ S++N+  ++Q    ++A   Q   VP   PD
Sbjct: 497  GNVLQKSGSVGP-DQLKTNGTSPASSTQGSKDNMNAQKQLENQIEAKPIQCQFVP--PPD 553

Query: 260  IFQQFTKELKSLADILSASQA----PSVVPLTVSSPIIPXXXXXXXXXXXXXXXKDQESG 93
            I QQFT+ LK++A ++S  Q+    P+V    VS P I                +DQ++G
Sbjct: 554  IAQQFTQSLKNIAGMMSGPQSFAGLPAVSQNLVSQP-IQVKSETADKNTKGSNSEDQQTG 612

Query: 92   TVTAPVERIV--QPTQNTWGDVEHLLEGYDDQ 3
            T TAP   +    P+QN WGDVEHL E YDD+
Sbjct: 613  TGTAPEAGVTCPPPSQNAWGDVEHLFEKYDDR 644


>gb|KJB77192.1| hypothetical protein B456_012G125200 [Gossypium raimondii]
          Length = 1033

 Score =  127 bits (319), Expect = 1e-26
 Identities = 109/272 (40%), Positives = 146/272 (53%), Gaps = 25/272 (9%)
 Frame = -1

Query: 743  EQLSLIGNGNMGSLPSPLKDIAVNP-MLISLLL--EHQRL-----QKSNNSPQNLVTSSS 588
            EQ+ L G  N  SLP+ LKDIAVNP MLI++L   + QRL     QK+ +  +N +   S
Sbjct: 429  EQVPLTGMSNP-SLPALLKDIAVNPTMLINILKMGQQQRLPSESQQKTPDPLKNTLYQPS 487

Query: 587  LNGFPGSIPMANIPSSKSSEIDQKYSV----KPQVPGQAISTGDSGKTRMKLRDPRLAAR 420
             N   G IP AN+  S S  +    S     KP    Q     +S K RMK RDPR    
Sbjct: 488  SNPVLGVIPPANVIPSPSVNVVPSSSSGTLSKPAGNLQGPPLDESCKIRMKPRDPRRVLH 547

Query: 419  MNTCQKNESLGPLEQLKTFG-APSSLTQDSRENLIVRQQ---SVQA---QTNSVPSGAPD 261
             N  QK+ S+GP +QLKT G +P+S TQ S++N+  ++Q    ++A   Q   VP   PD
Sbjct: 548  GNVLQKSGSVGP-DQLKTNGTSPASSTQGSKDNMNAQKQLENQIEAKPIQCQFVP--PPD 604

Query: 260  IFQQFTKELKSLADILSASQA----PSVVPLTVSSPIIPXXXXXXXXXXXXXXXKDQESG 93
            I QQFT+ LK++A ++S  Q+    P+V    VS P I                +DQ++G
Sbjct: 605  IAQQFTQSLKNIAGMMSGPQSFAGLPAVSQNLVSQP-IQVKSETADKNTKGSNSEDQQTG 663

Query: 92   TVTAPVERIV--QPTQNTWGDVEHLLEGYDDQ 3
            T TAP   +    P+QN WGDVEHL E YDD+
Sbjct: 664  TGTAPEAGVTCPPPSQNAWGDVEHLFEKYDDR 695


>ref|XP_012459417.1| PREDICTED: RNA polymerase II C-terminal domain phosphatase-like 3
            isoform X1 [Gossypium raimondii]
            gi|763810289|gb|KJB77191.1| hypothetical protein
            B456_012G125200 [Gossypium raimondii]
          Length = 1272

 Score =  127 bits (319), Expect = 1e-26
 Identities = 109/272 (40%), Positives = 146/272 (53%), Gaps = 25/272 (9%)
 Frame = -1

Query: 743  EQLSLIGNGNMGSLPSPLKDIAVNP-MLISLLL--EHQRL-----QKSNNSPQNLVTSSS 588
            EQ+ L G  N  SLP+ LKDIAVNP MLI++L   + QRL     QK+ +  +N +   S
Sbjct: 668  EQVPLTGMSNP-SLPALLKDIAVNPTMLINILKMGQQQRLPSESQQKTPDPLKNTLYQPS 726

Query: 587  LNGFPGSIPMANIPSSKSSEIDQKYSV----KPQVPGQAISTGDSGKTRMKLRDPRLAAR 420
             N   G IP AN+  S S  +    S     KP    Q     +S K RMK RDPR    
Sbjct: 727  SNPVLGVIPPANVIPSPSVNVVPSSSSGTLSKPAGNLQGPPLDESCKIRMKPRDPRRVLH 786

Query: 419  MNTCQKNESLGPLEQLKTFG-APSSLTQDSRENLIVRQQ---SVQA---QTNSVPSGAPD 261
             N  QK+ S+GP +QLKT G +P+S TQ S++N+  ++Q    ++A   Q   VP   PD
Sbjct: 787  GNVLQKSGSVGP-DQLKTNGTSPASSTQGSKDNMNAQKQLENQIEAKPIQCQFVP--PPD 843

Query: 260  IFQQFTKELKSLADILSASQA----PSVVPLTVSSPIIPXXXXXXXXXXXXXXXKDQESG 93
            I QQFT+ LK++A ++S  Q+    P+V    VS P I                +DQ++G
Sbjct: 844  IAQQFTQSLKNIAGMMSGPQSFAGLPAVSQNLVSQP-IQVKSETADKNTKGSNSEDQQTG 902

Query: 92   TVTAPVERIV--QPTQNTWGDVEHLLEGYDDQ 3
            T TAP   +    P+QN WGDVEHL E YDD+
Sbjct: 903  TGTAPEAGVTCPPPSQNAWGDVEHLFEKYDDR 934


>ref|XP_011020855.1| PREDICTED: RNA polymerase II C-terminal domain phosphatase-like 3
            [Populus euphratica]
          Length = 1271

 Score =  125 bits (315), Expect = 3e-26
 Identities = 99/262 (37%), Positives = 131/262 (50%), Gaps = 13/262 (4%)
 Frame = -1

Query: 749  GQEQLSLIGNGNMGSLPSPLKDIAVNPMLISLLL---EHQRL-----QKSNNSPQNLVTS 594
            G EQ  +       SLP  LKDI VNP L+  +L   + QRL     QK  +  ++    
Sbjct: 679  GSEQAPVTST-TTASLPDLLKDITVNPTLLINILKMGQQQRLALDGQQKLADPAKSTSHP 737

Query: 593  SSLNGFPGSIPMANIPSSKSSEIDQKYSVKPQVPGQAISTGDSGKTRMKLRDPRLAARMN 414
             S +  PG+ P  N  SS+ S I  + + K QVP Q  +T +SGK RMK RDPR     N
Sbjct: 738  PSSSSVPGATPEVNAVSSQPSGILPRSAGKAQVPSQVATTDESGKIRMKPRDPRRVLHNN 797

Query: 413  TCQKNESLGPLEQLKTFGAPSSLTQDSRENLIVRQQSVQAQTNSVPSGAPDIFQQFTKEL 234
              Q+  SLG  EQ KT    +S TQ +++N  +++Q   A+ N  P   PDI   FTK L
Sbjct: 798  ALQRAGSLGS-EQFKT-TTLTSTTQGTKDNQNLQKQEGLAELN--PVVPPDISSSFTKSL 853

Query: 233  KSLADILSASQA----PSVVPLTVSSPIIPXXXXXXXXXXXXXXXKDQESGTVTAP-VER 69
            +++ADI+S SQ     P V     S P+                  DQ+ G  ++P V  
Sbjct: 854  QNIADIVSVSQTCTTPPFVSQNVASQPV--QIKSDRVDGKTGTSNSDQKMGPASSPEVVA 911

Query: 68   IVQPTQNTWGDVEHLLEGYDDQ 3
                +QNTW DVEHL EGYDDQ
Sbjct: 912  ASSLSQNTWEDVEHLFEGYDDQ 933


>gb|KHG21997.1| RNA polymerase II C-terminal domain phosphatase-like 3 [Gossypium
            arboreum]
          Length = 1256

 Score =  125 bits (313), Expect = 5e-26
 Identities = 106/272 (38%), Positives = 144/272 (52%), Gaps = 25/272 (9%)
 Frame = -1

Query: 743  EQLSLIGNGNMGSLPSPLKDIAVNP-MLISLLL--EHQRL-----QKSNNSPQNLVTSSS 588
            EQ+ L G  N  SLP+ LKDIAVNP MLI++L   + QRL      K+ ++ +N +   S
Sbjct: 668  EQVPLTGMSNP-SLPALLKDIAVNPTMLINILKMGQQQRLPSESQHKTPDALKNTLYQPS 726

Query: 587  LNGFPGSIPMANIPSSKSSEIDQKYSV----KPQVPGQAISTGDSGKTRMKLRDPRLAAR 420
             N   G +P  N+  S S  +    S     KP    Q     +SGK RMK RDPR    
Sbjct: 727  SNPVLGVVPPGNVIPSPSVNVVPSTSSGTLSKPAGNLQGPPLDESGKIRMKPRDPRRVLH 786

Query: 419  MNTCQKNESLGPLEQLKTFG-APSSLTQDSRENLIVRQQ---SVQA---QTNSVPSGAPD 261
             N  QK  S+GP +QLKT G +P+S T  S++N+  ++Q    ++A   Q   VP   PD
Sbjct: 787  GNVLQKTSSVGP-DQLKTNGTSPASSTLGSKDNMNAQKQLENQIEAKPIQCQLVP--PPD 843

Query: 260  IFQQFTKELKSLADILSASQA----PSVVPLTVSSPIIPXXXXXXXXXXXXXXXKDQESG 93
            I QQFT+ LK++A ++S  Q+    P+V    VS P I                +DQ++G
Sbjct: 844  ITQQFTQSLKNIAGMMSGPQSFASLPAVSQNLVSQP-IQVKSETTDKNTKGSNCEDQQTG 902

Query: 92   TVTAPVERIV--QPTQNTWGDVEHLLEGYDDQ 3
            T TAP   +    P+QN WGDVEHL E YDD+
Sbjct: 903  TGTAPEVGVTCPPPSQNAWGDVEHLFEKYDDR 934


>ref|XP_011656791.1| PREDICTED: RNA polymerase II C-terminal domain phosphatase-like 3
            [Cucumis sativus] gi|700191214|gb|KGN46418.1|
            hypothetical protein Csa_6G091910 [Cucumis sativus]
          Length = 1251

 Score =  125 bits (313), Expect = 5e-26
 Identities = 98/299 (32%), Positives = 138/299 (46%), Gaps = 16/299 (5%)
 Frame = -1

Query: 851  ESIRSSDPRKFGNGEVVLGQRQDNGGRNLTAGAG-GQEQLSLIGNGNMGSLPSPLKDIAV 675
            E    + PR F   ++ + +       N+T  +G G E    + N N  SLPS LKDI V
Sbjct: 631  EDTMPAGPRLFNRNQMEIAEANATEKSNVTNNSGSGNECTPTVNNSNDASLPSLLKDIVV 690

Query: 674  NP-MLISLLLEHQRLQ-------KSNNSPQNLVTSSSLNGFPGSIPMANIPSSKSSEIDQ 519
            NP ML++LL   Q+ Q       KS+   +N +  +SLN   GS P+ N P + S  + Q
Sbjct: 691  NPTMLLNLLKMSQQQQLAAELKLKSSEPEKNAICPTSLNPCQGSSPLINAPVATSGILQQ 750

Query: 518  KYSVKPQVPGQAISTGDS-GKTRMKLRDPRLAARMNTCQKNESLGPLEQLKTFGAPSSLT 342
                    P  A+   D  GK RMK RDPR     N+ QK  SLG  +QLK     +S T
Sbjct: 751  SAGTPSASPVVAVGRQDDLGKVRMKPRDPRRVLHGNSLQKVGSLGN-DQLKGVVPTASNT 809

Query: 341  QDSRENLIVRQQSVQAQTNSVPSGA--PDIFQQFTKELKSLADILSASQAPSVVPLTVSS 168
            + SR+     +Q  Q  +    S    PDI +QFT  LK++ADI+S    P+  P + S 
Sbjct: 810  EGSRDIPNGHKQEGQGDSKLASSQTILPDIGRQFTNNLKNIADIMSVPSPPTSSPNSSSK 869

Query: 167  PIIPXXXXXXXXXXXXXXXKDQESGTVTAPVERI----VQPTQNTWGDVEHLLEGYDDQ 3
            P+                    +S  VT   + +       +Q  WGD+EHL + YDD+
Sbjct: 870  PV---------------GSSSMDSKPVTTAFQAVDMAASSRSQGAWGDLEHLFDSYDDK 913


>ref|XP_008222368.1| PREDICTED: RNA polymerase II C-terminal domain phosphatase-like 3
            [Prunus mume]
          Length = 1194

 Score =  124 bits (310), Expect = 1e-25
 Identities = 97/269 (36%), Positives = 137/269 (50%), Gaps = 13/269 (4%)
 Frame = -1

Query: 770  NLTAGAGGQEQLSLIGNGNMGSLPSPLKDIAVNP-MLISLLL--EHQRL-----QKSNNS 615
            N        E +SL+G  +  SLP+ LKDIAVNP ML++LL   + QRL     QKS + 
Sbjct: 600  NTNGPNSANEHVSLMG-ASTASLPALLKDIAVNPTMLLNLLKMGQQQRLAAEAQQKSADP 658

Query: 614  PQNLVTSSSLNGFPGSIPMANIPSSKSSEIDQKYSVKPQVPGQAISTGDSGKTRMKLRDP 435
            P+     +S +    S  + N+PS  S  +       P V  Q     +SGK RMK RDP
Sbjct: 659  PKTTTHPTSSSSILVSAALGNVPSKTSGILQTPAGTLP-VSSQKALMDESGKVRMKPRDP 717

Query: 434  RLAARMNTCQKNESLGPLEQLKTFGAPSSLTQDSRENLIVRQQSVQAQTNSVPSGAPDIF 255
            R A   N  QK+ SLG  EQ +    P S  Q +++NL    Q+ +    +    APDI 
Sbjct: 718  RRALHGNALQKSGSLGH-EQFRNIVPPLSSIQGNKDNL--NGQADKKPVTAQSLDAPDIT 774

Query: 254  QQFTKELKSLADILSASQ---APSVVPLTVSSPIIPXXXXXXXXXXXXXXXKDQESGTVT 84
            +QFTK LK++ADI+S S    +P++   +VSS  +P               ++Q   +++
Sbjct: 775  RQFTKNLKNIADIMSVSNVSTSPAIASQSVSSQPVP-----IKPERIDLKPEEQRPESIS 829

Query: 83   APVERIVQPTQN--TWGDVEHLLEGYDDQ 3
            A       P+++   WGDVEHL EGYDDQ
Sbjct: 830  ASEAAAAGPSRSPVMWGDVEHLFEGYDDQ 858


>ref|XP_012088736.1| PREDICTED: RNA polymerase II C-terminal domain phosphatase-like 3
            [Jatropha curcas] gi|643708360|gb|KDP23276.1|
            hypothetical protein JCGZ_23109 [Jatropha curcas]
          Length = 1283

 Score =  124 bits (310), Expect = 1e-25
 Identities = 102/306 (33%), Positives = 145/306 (47%), Gaps = 25/306 (8%)
 Frame = -1

Query: 845  IRSSDPRKFGNGEVVLGQRQDNGGRNLTAGAGGQEQLSLIGNGNM-------------GS 705
            + +SDPR+  NG             +++    G EQ  +IG G +              S
Sbjct: 654  VENSDPRRMDNGVACPSTVSGISSVSIS----GNEQKPVIGTGAITEGEQIQMTGTSEAS 709

Query: 704  LPSPLKDIAVNPMLISLLLEHQRLQKS----NNSPQNLVTSS----SLNGFPGSIPMANI 549
            LP  LK+IAVNP ++  LL+  + Q+S       P +   +S    + N   GS+P+ N+
Sbjct: 710  LPDLLKNIAVNPTMLLNLLKMGQQQRSAIDAQQKPSDPAKTSKHPLNANAILGSVPVVNV 769

Query: 548  PSSKSSEIDQKYSVKPQVPGQAISTGDSGKTRMKLRDPRLAARMNTCQKNESLGPLEQLK 369
               + S + +      QVP QA +  + GK RMK RDPR      T QKN ++G  EQ K
Sbjct: 770  VPPQPSVMPRPAGTL-QVPPQA-AVEELGKIRMKPRDPRRVLHYQTLQKNGNMG-YEQFK 826

Query: 368  TFGAPSSLTQDSRENLIVRQQSVQAQTNSVPSGA---PDIFQQFTKELKSLADILSASQA 198
            T        Q +++N IV++Q  QA+T  VP  +   PDI   FTK LK++ADI+S S A
Sbjct: 827  TNLTSPPTDQGTKDNQIVQKQDGQAETEPVPLQSLVVPDISLPFTKSLKNIADIVSVSHA 886

Query: 197  PSVVPLTVSSPIIPXXXXXXXXXXXXXXXKDQESGTVTAPVERIVQPT-QNTWGDVEHLL 21
             +       SP +                 +Q +G  +AP    V P  Q+ WGDVEHL 
Sbjct: 887  ST-------SPTVVSQNLASQPTRTIVSNSEQPAGIGSAPCVAPVGPRPQDAWGDVEHLF 939

Query: 20   EGYDDQ 3
            EGY DQ
Sbjct: 940  EGYSDQ 945