BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver29_contig00033662
         (1531 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002267079.1| PREDICTED: CRS2-associated factor 2, chlorop...   672   0.0  
ref|XP_011045289.1| PREDICTED: CRS2-associated factor 2, chlorop...   642   0.0  
ref|XP_012085424.1| PREDICTED: CRS2-associated factor 2, chlorop...   640   0.0  
ref|XP_008446191.1| PREDICTED: CRS2-associated factor 2, chlorop...   638   e-180
gb|ADN33825.1| RNA splicing factor [Cucumis melo subsp. melo]         638   e-180
ref|XP_002315689.2| hypothetical protein POPTR_0010s05230g [Popu...   637   e-179
ref|XP_007044701.1| RNA-binding CRS1 / YhbY (CRM) domain-contain...   637   e-179
ref|XP_004135256.2| PREDICTED: CRS2-associated factor 2, chlorop...   630   e-178
ref|XP_004509634.1| PREDICTED: CRS2-associated factor 2, chlorop...   630   e-177
ref|XP_010026662.1| PREDICTED: CRS2-associated factor 2, chlorop...   624   e-176
ref|XP_010270955.1| PREDICTED: CRS2-associated factor 2, chlorop...   623   e-175
ref|XP_012479367.1| PREDICTED: CRS2-associated factor 2, chlorop...   622   e-175
gb|KJB31209.1| hypothetical protein B456_005G181000 [Gossypium r...   622   e-175
ref|XP_013446181.1| CRS2-associated factor 1 [Medicago truncatul...   621   e-175
gb|KHG22318.1| hypothetical protein F383_04491 [Gossypium arboreum]   617   e-174
ref|XP_002893285.1| hypothetical protein ARALYDRAFT_335585 [Arab...   615   e-173
ref|XP_006416086.1| hypothetical protein EUTSA_v10007246mg [Eutr...   615   e-173
ref|XP_006438328.1| hypothetical protein CICLE_v10031138mg [Citr...   613   e-172
ref|XP_010477635.1| PREDICTED: CRS2-associated factor 2, chlorop...   612   e-172
ref|NP_173754.2| CRS2-associated factor 2 [Arabidopsis thaliana]...   612   e-172

>ref|XP_002267079.1| PREDICTED: CRS2-associated factor 2, chloroplastic [Vitis vinifera]
            gi|297739063|emb|CBI28552.3| unnamed protein product
            [Vitis vinifera]
          Length = 561

 Score =  672 bits (1733), Expect = 0.0
 Identities = 327/414 (78%), Positives = 357/414 (86%)
 Frame = -3

Query: 1244 SQKSIIKQPPNESTTTTSPAFKSFHRRTKYYKPVSDGVISSEGDRSVIIGESGVSYSLPG 1065
            SQKS   +PP +  T   PAFK+ H R+KYYKPVSDGVI+S+GDRSV+IGESGVSY LPG
Sbjct: 47   SQKS--SRPPTKPPT---PAFKTVHHRSKYYKPVSDGVIASDGDRSVVIGESGVSYLLPG 101

Query: 1064 APFEFQFSYSETPKVKPLAIREPAFLPFAPPTMPRPWTGKAPLKKSKKNIPLFDSFNPPP 885
            APFEFQFSYSETPK KPLAIREPAFLPFAPPTMPRPWTGKAPLKKSKK IPLFDSFNPPP
Sbjct: 102  APFEFQFSYSETPKAKPLAIREPAFLPFAPPTMPRPWTGKAPLKKSKKKIPLFDSFNPPP 161

Query: 884  VGMKGVKQVEMPGPFPLGRFPKEGMTREEILGERLTKEEVRMLVKPHLSHNRQVNLGRDG 705
             G KGVK+VEMPGPFPLG+FP EG TREEILGE L+K E+RMLVKP+LSHNRQVNLGRDG
Sbjct: 162  PGTKGVKRVEMPGPFPLGKFPVEGRTREEILGEPLSKAEIRMLVKPYLSHNRQVNLGRDG 221

Query: 704  LTHNMLELIHEHWKRQRICKVRCRGVPTVDMDNVCYHLEEKTGGKIIHRVGGVLYLFRGR 525
            LTHNMLELIH HWKRQR+CKVRC+GVPT+DMDNVC+HLEEKTGGKIIHRVGGV+YLFRGR
Sbjct: 222  LTHNMLELIHSHWKRQRVCKVRCKGVPTIDMDNVCHHLEEKTGGKIIHRVGGVVYLFRGR 281

Query: 524  NYNYRTRPQYPVMLWKPATPVYPKLIQEAPEGLTKFEAADMIKKGKNLLPICKLAKNGIY 345
            NYNYRTRPQYPVMLWKPA PVYPKLIQEAPEGLTKFEA ++  KGKNL+PIC+L KNG+Y
Sbjct: 282  NYNYRTRPQYPVMLWKPAAPVYPKLIQEAPEGLTKFEADELRMKGKNLIPICRLVKNGVY 341

Query: 344  MNLVKDVRDAFEGSPLVKIDCRGMHASDYKKIGAKLKELVPCVLLSFDDEQILTWRGEEW 165
            ++LVKDVRDAFEGSPLVKIDC+GMHASDYKKIGAKLKELVPCVLLSFDDEQILTWRG  W
Sbjct: 342  ISLVKDVRDAFEGSPLVKIDCKGMHASDYKKIGAKLKELVPCVLLSFDDEQILTWRGHGW 401

Query: 164  KSMYPEAPPTVPVSNHSNDSASLNSGELHSANERLVPELEISSPKFLSRWKRAI 3
            KSMY  AP  +        S    SG   S + RL  +   +SPK +S WK AI
Sbjct: 402  KSMYQGAPSFLIPVVADVASGLEGSGIPKSNHHRLDTKAVSASPKMMSLWKSAI 455


>ref|XP_011045289.1| PREDICTED: CRS2-associated factor 2, chloroplastic [Populus
            euphratica]
          Length = 559

 Score =  642 bits (1656), Expect = 0.0
 Identities = 309/415 (74%), Positives = 350/415 (84%), Gaps = 5/415 (1%)
 Frame = -3

Query: 1232 IIKQPP--NESTTTTSPAFKSFHRRTKYYKPVSDG--VISSEGDRSVIIGESGVSYSLPG 1065
            I K PP   +S  + +PAFK  H RTKYYKPV DG  VI+S+GDRSV++G+SGVSY LPG
Sbjct: 41   IPKYPPPLKKSKNSANPAFKIPHLRTKYYKPVKDGGGVIASDGDRSVLVGDSGVSYLLPG 100

Query: 1064 APFEFQFSYSETPKVKPLAIREPAFLPFAPPTMPRPWTGKAPLKKSKKNIPLFDSFNPPP 885
            APFEFQFSYSETPKVKPLAIREPAFLPFAPPTMPRPWTGK PLK SKK IP+FDSFNPPP
Sbjct: 101  APFEFQFSYSETPKVKPLAIREPAFLPFAPPTMPRPWTGKPPLKTSKKKIPVFDSFNPPP 160

Query: 884  VGMKGVKQVEMPGPFPLGRFPKEGMTREEILGERLTKEEVRMLVKPHLSHNRQVNLGRDG 705
             G KGVK VEMPGP+P G+FP+EG +REEILGE L   E++ML+KPHLS NRQVNLGRDG
Sbjct: 161  AGKKGVKYVEMPGPYPFGKFPEEGKSREEILGEPLKTWEIKMLIKPHLSDNRQVNLGRDG 220

Query: 704  LTHNMLELIHEHWKRQRICKVRCRGVPTVDMDNVCYHLEEKTGGKIIHRVGGVLYLFRGR 525
            LTHNMLEL+H HWKR+R+CKVRC+GVPTVDMDNVC HLEEKTGGKIIHRVGGV+YLFRGR
Sbjct: 221  LTHNMLELVHSHWKRRRVCKVRCKGVPTVDMDNVCRHLEEKTGGKIIHRVGGVVYLFRGR 280

Query: 524  NYNYRTRPQYPVMLWKPATPVYPKLIQEAPEGLTKFEAADMIKKGKNLLPICKLAKNGIY 345
            NYNYRTRPQYPVMLWKPA PVYPKLIQEAPEGLTK EA +  KKGKNLLPICKLAKNG+Y
Sbjct: 281  NYNYRTRPQYPVMLWKPAAPVYPKLIQEAPEGLTKAEADEFRKKGKNLLPICKLAKNGVY 340

Query: 344  MNLVKDVRDAFEGSPLVKIDCRGMHASDYKKIGAKLKELVPCVLLSFDDEQILTWRGEEW 165
            + LV+DVR AFEGSPLVK+DC+GM  SDYKK+GAKLK+LVPCVLLSFDDEQIL WRG++W
Sbjct: 341  ITLVRDVRTAFEGSPLVKVDCKGMEPSDYKKLGAKLKDLVPCVLLSFDDEQILMWRGQDW 400

Query: 164  KSMYPEAPPTVPVSNHSN-DSASLNSGELHSANERLVPELEISSPKFLSRWKRAI 3
            KSMYPEA P++      +  S S +SG+     +    ++  SSPK +  WKRA+
Sbjct: 401  KSMYPEAQPSISFPAELDIASGSDDSGKSDDDCDNSDAKIVSSSPKMMLLWKRAL 455


>ref|XP_012085424.1| PREDICTED: CRS2-associated factor 2, chloroplastic [Jatropha curcas]
            gi|643713951|gb|KDP26616.1| hypothetical protein
            JCGZ_17774 [Jatropha curcas]
          Length = 558

 Score =  640 bits (1652), Expect = 0.0
 Identities = 303/411 (73%), Positives = 352/411 (85%), Gaps = 2/411 (0%)
 Frame = -3

Query: 1229 IKQPPNESTTTTSPAFKSFHRRTKYYKPVSDGVISSEGDRSVIIGESGVSYSLPGAPFEF 1050
            +K+  N  T+T +PAFK  HRRTKYYKPV DGV+SS+GDRSV+IGE+G+SY LPGAPFEF
Sbjct: 44   LKKSKNSKTSTPNPAFKLPHRRTKYYKPVKDGVVSSDGDRSVVIGENGISYQLPGAPFEF 103

Query: 1049 QFSYSETPKVKPLAIREPAFLPFAPPTMPRPWTGKAPLKKSKKNIPLFDSFNPPPVGMKG 870
            Q+SYSETPKVKPLAIREPAFLPFAPPTMPRPWTGKAPLKKSKK IPLFDSFNPPP   KG
Sbjct: 104  QYSYSETPKVKPLAIREPAFLPFAPPTMPRPWTGKAPLKKSKKKIPLFDSFNPPPPDKKG 163

Query: 869  VKQVEMPGPFPLGRFPKEGMTREEILGERLTKEEVRMLVKPHLSHNRQVNLGRDGLTHNM 690
            V  +EMP PFP+G+FP+EG TR+EILG+ L K E++ML+KP  S NRQVNLGRDGLTHNM
Sbjct: 164  VNFMEMPRPFPMGKFPEEGKTRKEILGQPLKKWEIKMLIKPLASDNRQVNLGRDGLTHNM 223

Query: 689  LELIHEHWKRQRICKVRCRGVPTVDMDNVCYHLEEKTGGKIIHRVGGVLYLFRGRNYNYR 510
            L+LIH HW+RQ++CKVRC+G+PTVDMDN+C+HLEEKTGGK+IHRVGGV+YLF GRNY+YR
Sbjct: 224  LDLIHSHWRRQQVCKVRCKGIPTVDMDNICHHLEEKTGGKVIHRVGGVVYLFCGRNYDYR 283

Query: 509  TRPQYPVMLWKPATPVYPKLIQEAPEGLTKFEAADMIKKGKNLLPICKLAKNGIYMNLVK 330
            TRPQYPVM+WKPA PVYPKLIQEAPEGLTK EA +  KKGKNLLPICKLAKNG+Y+ LVK
Sbjct: 284  TRPQYPVMIWKPAAPVYPKLIQEAPEGLTKAEADEFRKKGKNLLPICKLAKNGVYITLVK 343

Query: 329  DVRDAFEGSPLVKIDCRGMHASDYKKIGAKLKELVPCVLLSFDDEQILTWRGEEWKSMYP 150
            DVR+AFEGSPLVKIDC+GM+ SDYKK+GAKLKELVPCVLLSFDDEQIL WRG+ WK MYP
Sbjct: 344  DVRNAFEGSPLVKIDCKGMNPSDYKKLGAKLKELVPCVLLSFDDEQILMWRGQNWKPMYP 403

Query: 149  E--APPTVPVSNHSNDSASLNSGELHSANERLVPELEISSPKFLSRWKRAI 3
            E  + P V +++ S+DS   +  +  + +   V     SSPK +S WKRAI
Sbjct: 404  EGRSVPEVDIASDSDDSGKFDD-DCDNPDANTVR----SSPKMMSLWKRAI 449


>ref|XP_008446191.1| PREDICTED: CRS2-associated factor 2, chloroplastic [Cucumis melo]
          Length = 611

 Score =  638 bits (1646), Expect = e-180
 Identities = 311/424 (73%), Positives = 352/424 (83%), Gaps = 14/424 (3%)
 Frame = -3

Query: 1232 IIKQPPNESTT--------TTSPAFKSFHRRTKYYKPVSDGVISSEGDRSVIIGESGVSY 1077
            I K PP +S T        + +PA K+FHRR+KYYKPV DGVISS G+R+V+IG+SGVSY
Sbjct: 92   IPKYPPPKSRTLRTNNPPKSPNPALKTFHRRSKYYKPVKDGVISSNGERAVVIGDSGVSY 151

Query: 1076 SLPGAPFEFQFSYSETPKVKPLAIREPAFLPFAPPTMPRPWTGKAPLKKSKKNIPLFDSF 897
             LPGAPFEFQ+SYSETP VKP+AIREPAFLPFAPPTMPRPWTGKAPLK SKK IPLFDSF
Sbjct: 152  LLPGAPFEFQYSYSETPNVKPIAIREPAFLPFAPPTMPRPWTGKAPLKSSKKKIPLFDSF 211

Query: 896  NPPPVGMKGVKQVEMPGPFPLGRFPKEGMTREEILGERLTKEEVRMLVKPHLSHNRQVNL 717
            NPPP G KGVKQV++PGPFPLG++PKEG +REEILGE L   E+RMLVKPHLSHNRQVNL
Sbjct: 212  NPPPPGTKGVKQVQLPGPFPLGQYPKEGKSREEILGEPLKNWEIRMLVKPHLSHNRQVNL 271

Query: 716  GRDGLTHNMLELIHEHWKRQRICKVRCRGVPTVDMDNVCYHLEEKTGGKIIHRVGGVLYL 537
            GRDGLTHNMLELIH HWKRQR+CKVRC+GVPTVDMDN+C+H+EEKTGGKIIHRVGGVLYL
Sbjct: 272  GRDGLTHNMLELIHSHWKRQRVCKVRCKGVPTVDMDNICHHIEEKTGGKIIHRVGGVLYL 331

Query: 536  FRGRNYNYRTRPQYPVMLWKPATPVYPKLIQEAPEGLTKFEAADMIKKGKNLLPICKLAK 357
            FRGRNYNYRTRPQYPVMLWKPA PVYPKLIQEAPEGLTK EA ++  KGKNLLPICKLAK
Sbjct: 332  FRGRNYNYRTRPQYPVMLWKPAAPVYPKLIQEAPEGLTKEEANELRMKGKNLLPICKLAK 391

Query: 356  NGIYMNLVKDVRDAFEGSPLVKIDCRGMHASDYKKIGAKLKELVPCVLLSFDDEQILTWR 177
            NG+Y++LV DVR AFEGS LVKIDC GMH SDYKK+GAKLKELVPCVLLSFD+EQIL WR
Sbjct: 392  NGVYISLVDDVRHAFEGSILVKIDCTGMHESDYKKLGAKLKELVPCVLLSFDNEQILMWR 451

Query: 176  GEEWKSMY-PEAPPTVPVSNHSNDS-----ASLNSGELHSANERLVPELEISSPKFLSRW 15
            G++WKS+   +    +P    SNDS      S+ + +L + N   +     +SPK    W
Sbjct: 452  GKDWKSVISDDRSAPLPSRASSNDSLGSSGESVENSDLLNGNHHTIK----TSPKMKLLW 507

Query: 14   KRAI 3
            +RAI
Sbjct: 508  ERAI 511


>gb|ADN33825.1| RNA splicing factor [Cucumis melo subsp. melo]
          Length = 603

 Score =  638 bits (1646), Expect = e-180
 Identities = 311/424 (73%), Positives = 352/424 (83%), Gaps = 14/424 (3%)
 Frame = -3

Query: 1232 IIKQPPNESTT--------TTSPAFKSFHRRTKYYKPVSDGVISSEGDRSVIIGESGVSY 1077
            I K PP +S T        + +PA K+FHRR+KYYKPV DGVISS G+R+V+IG+SGVSY
Sbjct: 84   IPKYPPPKSRTLRTNNPPKSPNPALKTFHRRSKYYKPVKDGVISSNGERAVVIGDSGVSY 143

Query: 1076 SLPGAPFEFQFSYSETPKVKPLAIREPAFLPFAPPTMPRPWTGKAPLKKSKKNIPLFDSF 897
             LPGAPFEFQ+SYSETP VKP+AIREPAFLPFAPPTMPRPWTGKAPLK SKK IPLFDSF
Sbjct: 144  LLPGAPFEFQYSYSETPNVKPIAIREPAFLPFAPPTMPRPWTGKAPLKSSKKKIPLFDSF 203

Query: 896  NPPPVGMKGVKQVEMPGPFPLGRFPKEGMTREEILGERLTKEEVRMLVKPHLSHNRQVNL 717
            NPPP G KGVKQV++PGPFPLG++PKEG +REEILGE L   E+RMLVKPHLSHNRQVNL
Sbjct: 204  NPPPPGTKGVKQVQLPGPFPLGQYPKEGKSREEILGEPLKNWEIRMLVKPHLSHNRQVNL 263

Query: 716  GRDGLTHNMLELIHEHWKRQRICKVRCRGVPTVDMDNVCYHLEEKTGGKIIHRVGGVLYL 537
            GRDGLTHNMLELIH HWKRQR+CKVRC+GVPTVDMDN+C+H+EEKTGGKIIHRVGGVLYL
Sbjct: 264  GRDGLTHNMLELIHSHWKRQRVCKVRCKGVPTVDMDNICHHIEEKTGGKIIHRVGGVLYL 323

Query: 536  FRGRNYNYRTRPQYPVMLWKPATPVYPKLIQEAPEGLTKFEAADMIKKGKNLLPICKLAK 357
            FRGRNYNYRTRPQYPVMLWKPA PVYPKLIQEAPEGLTK EA ++  KGKNLLPICKLAK
Sbjct: 324  FRGRNYNYRTRPQYPVMLWKPAAPVYPKLIQEAPEGLTKEEANELRMKGKNLLPICKLAK 383

Query: 356  NGIYMNLVKDVRDAFEGSPLVKIDCRGMHASDYKKIGAKLKELVPCVLLSFDDEQILTWR 177
            NG+Y++LV DVR AFEGS LVKIDC GMH SDYKK+GAKLKELVPCVLLSFD+EQIL WR
Sbjct: 384  NGVYISLVDDVRHAFEGSILVKIDCTGMHESDYKKLGAKLKELVPCVLLSFDNEQILMWR 443

Query: 176  GEEWKSMY-PEAPPTVPVSNHSNDS-----ASLNSGELHSANERLVPELEISSPKFLSRW 15
            G++WKS+   +    +P    SNDS      S+ + +L + N   +     +SPK    W
Sbjct: 444  GKDWKSVISDDRSAPLPSRASSNDSLGSSGESVENSDLLNGNHHTIK----TSPKMKLLW 499

Query: 14   KRAI 3
            +RAI
Sbjct: 500  ERAI 503


>ref|XP_002315689.2| hypothetical protein POPTR_0010s05230g [Populus trichocarpa]
            gi|550329113|gb|EEF01860.2| hypothetical protein
            POPTR_0010s05230g [Populus trichocarpa]
          Length = 557

 Score =  637 bits (1642), Expect = e-179
 Identities = 306/415 (73%), Positives = 349/415 (84%), Gaps = 5/415 (1%)
 Frame = -3

Query: 1232 IIKQPP--NESTTTTSPAFKSFHRRTKYYKPVSDG--VISSEGDRSVIIGESGVSYSLPG 1065
            I K PP   +S  + +PAFK  H RTKYYKPV DG  VI+S+GDRSV++G+SGVSY LPG
Sbjct: 39   IPKYPPPLKKSKNSANPAFKIPHLRTKYYKPVKDGGGVIASDGDRSVLVGDSGVSYLLPG 98

Query: 1064 APFEFQFSYSETPKVKPLAIREPAFLPFAPPTMPRPWTGKAPLKKSKKNIPLFDSFNPPP 885
            APFEFQFSYSETPKVKPLAIREPAFLPFAPPTMPRPWTGK PLK SKK IP+FDSFNPPP
Sbjct: 99   APFEFQFSYSETPKVKPLAIREPAFLPFAPPTMPRPWTGKPPLKTSKKKIPVFDSFNPPP 158

Query: 884  VGMKGVKQVEMPGPFPLGRFPKEGMTREEILGERLTKEEVRMLVKPHLSHNRQVNLGRDG 705
             G KGVK VEMPGP+P G+FP+EG +REEILGE L   E+++L+KPHLS NRQVNLG DG
Sbjct: 159  AGKKGVKYVEMPGPYPFGKFPEEGKSREEILGEPLKTWEIKLLIKPHLSDNRQVNLGEDG 218

Query: 704  LTHNMLELIHEHWKRQRICKVRCRGVPTVDMDNVCYHLEEKTGGKIIHRVGGVLYLFRGR 525
            LTHNMLEL+H HWKR+R+CKVRC+GVPTVDMDNVC HLEEKTGGKIIHRVGGV+YLFRGR
Sbjct: 219  LTHNMLELVHSHWKRRRVCKVRCKGVPTVDMDNVCRHLEEKTGGKIIHRVGGVVYLFRGR 278

Query: 524  NYNYRTRPQYPVMLWKPATPVYPKLIQEAPEGLTKFEAADMIKKGKNLLPICKLAKNGIY 345
            NYNYRTRPQYPVMLWKPATPVYPKLIQEAPEGLTK +A +  KKGKNLLPICKLAKNG+Y
Sbjct: 279  NYNYRTRPQYPVMLWKPATPVYPKLIQEAPEGLTKAQADEFRKKGKNLLPICKLAKNGVY 338

Query: 344  MNLVKDVRDAFEGSPLVKIDCRGMHASDYKKIGAKLKELVPCVLLSFDDEQILTWRGEEW 165
            + LV+DVR AFEGSPLVK+DC+GM  SDYKK+GAKLK+LVPCVLLSFDDEQIL WRG++W
Sbjct: 339  ITLVRDVRAAFEGSPLVKVDCKGMEPSDYKKLGAKLKDLVPCVLLSFDDEQILMWRGQDW 398

Query: 164  KSMYPEAPPTVPVSNHSN-DSASLNSGELHSANERLVPELEISSPKFLSRWKRAI 3
            KSMYPEA P++      +  S S +SG+     +    ++  SSPK +  WK A+
Sbjct: 399  KSMYPEARPSISFPAELDIASGSDDSGKSDDDCDNSDAKILSSSPKMMLLWKHAL 453


>ref|XP_007044701.1| RNA-binding CRS1 / YhbY (CRM) domain-containing protein [Theobroma
            cacao] gi|508708636|gb|EOY00533.1| RNA-binding CRS1 /
            YhbY (CRM) domain-containing protein [Theobroma cacao]
          Length = 562

 Score =  637 bits (1642), Expect = e-179
 Identities = 307/410 (74%), Positives = 346/410 (84%), Gaps = 2/410 (0%)
 Frame = -3

Query: 1226 KQPPNESTTTTSPAFKSFHRRTKYYKPVSDGVISSEGDRSVIIGESGVSYSLPGAPFEFQ 1047
            K+ P  +   ++PA    HRR+ Y KPV  GVISS+GDR V+IGE+GVSY LPGAPFEFQ
Sbjct: 46   KRNPQRTLPQSNPAISLPHRRSNYRKPVKKGVISSDGDRCVVIGENGVSYQLPGAPFEFQ 105

Query: 1046 FSYSETPKVKPLAIREPAFLPFAPPTMPRPWTGKAPLKKSKKNIPLFDSFNPPPVGMKGV 867
            FSYSETPK +P+AIREPAFLPFAPPTMPRPWTGKAPL KSKK IPLFDSFNPPP   KGV
Sbjct: 106  FSYSETPKAEPIAIREPAFLPFAPPTMPRPWTGKAPLIKSKKKIPLFDSFNPPPPDKKGV 165

Query: 866  KQVEMPGPFPLGRFPKEGMTREEILGERLTKEEVRMLVKPHLSHNRQVNLGRDGLTHNML 687
            K VEMPGPFP G++PKEG TREEILGE L K E++MLVKP LS NRQVNLGRDGLTHNML
Sbjct: 166  KYVEMPGPFPYGKYPKEGKTREEILGEPLKKWEIKMLVKPLLSDNRQVNLGRDGLTHNML 225

Query: 686  ELIHEHWKRQRICKVRCRGVPTVDMDNVCYHLEEKTGGKIIHRVGGVLYLFRGRNYNYRT 507
            +LIH HWKR+R+CK++C+GVPTVDMDNVC H+EEKTGGKIIHRVGGV+YLFRGRNYNYRT
Sbjct: 226  DLIHTHWKRRRVCKIKCKGVPTVDMDNVCRHIEEKTGGKIIHRVGGVVYLFRGRNYNYRT 285

Query: 506  RPQYPVMLWKPATPVYPKLIQEAPEGLTKFEAADMIKKGKNLLPICKLAKNGIYMNLVKD 327
            RPQYPVMLWKPA PVYPKLIQEAPEGLTK E   + KKGK+LLPICKLAKNG+Y +LVKD
Sbjct: 286  RPQYPVMLWKPAAPVYPKLIQEAPEGLTKAETDVLRKKGKSLLPICKLAKNGVYASLVKD 345

Query: 326  VRDAFEGSPLVKIDCRGMHASDYKKIGAKLKELVPCVLLSFDDEQILTWRGEEWKSMYPE 147
            VRDAFEGSPLVKIDC+GMHASDYKKIGAKLKEL PCVLLSFDDEQIL WRG++WKSMYPE
Sbjct: 346  VRDAFEGSPLVKIDCKGMHASDYKKIGAKLKELAPCVLLSFDDEQILMWRGQDWKSMYPE 405

Query: 146  APPTVPVSNHSNDSASLNSGELHSANERLVPELE--ISSPKFLSRWKRAI 3
            AP T+  S     S   +S +  SA++   P+++  ISSPK ++ W  AI
Sbjct: 406  APSTLLPSKSGISSGLDDSAK--SADDCHTPDIKNGISSPKMMTLWNNAI 453


>ref|XP_004135256.2| PREDICTED: CRS2-associated factor 2, chloroplastic [Cucumis sativus]
            gi|700196613|gb|KGN51790.1| hypothetical protein
            Csa_5G600920 [Cucumis sativus]
          Length = 556

 Score =  630 bits (1626), Expect = e-178
 Identities = 310/424 (73%), Positives = 346/424 (81%), Gaps = 14/424 (3%)
 Frame = -3

Query: 1232 IIKQPPNESTTTTS--------PAFKSFHRRTKYYKPVSDGVISSEGDRSVIIGESGVSY 1077
            I K PP +S T  +        PA K+FH R+KYYKPV DGVISS G+R+V+IG+SGVSY
Sbjct: 37   IPKYPPPKSRTLRTNNPPKPPNPALKTFHHRSKYYKPVKDGVISSNGERAVVIGDSGVSY 96

Query: 1076 SLPGAPFEFQFSYSETPKVKPLAIREPAFLPFAPPTMPRPWTGKAPLKKSKKNIPLFDSF 897
             LPGAPFEFQ+SYSETPKVKP+AIREPAFLPFAPPTMPRPWTGKAPLK SKK IPLFDSF
Sbjct: 97   HLPGAPFEFQYSYSETPKVKPIAIREPAFLPFAPPTMPRPWTGKAPLKSSKKKIPLFDSF 156

Query: 896  NPPPVGMKGVKQVEMPGPFPLGRFPKEGMTREEILGERLTKEEVRMLVKPHLSHNRQVNL 717
            NPPP G KGVK V++PGPFPLG+ PKEG +REEILGE L   E+RMLVKPHLSHNRQVNL
Sbjct: 157  NPPPPGTKGVKLVQLPGPFPLGQHPKEGKSREEILGEPLKNWEIRMLVKPHLSHNRQVNL 216

Query: 716  GRDGLTHNMLELIHEHWKRQRICKVRCRGVPTVDMDNVCYHLEEKTGGKIIHRVGGVLYL 537
            GRDGLTHNMLELIH HWKRQR+CKVRC+GVPTVDMDN+C+H+EEKTGGKIIHRVGGVLYL
Sbjct: 217  GRDGLTHNMLELIHSHWKRQRVCKVRCKGVPTVDMDNICHHIEEKTGGKIIHRVGGVLYL 276

Query: 536  FRGRNYNYRTRPQYPVMLWKPATPVYPKLIQEAPEGLTKFEAADMIKKGKNLLPICKLAK 357
            FRGRNYNYRTRPQYPVMLWKPA PVYPKLIQEAPEGLTK EA  +  KGKNLLPICKLAK
Sbjct: 277  FRGRNYNYRTRPQYPVMLWKPAAPVYPKLIQEAPEGLTKKEANVLRMKGKNLLPICKLAK 336

Query: 356  NGIYMNLVKDVRDAFEGSPLVKIDCRGMHASDYKKIGAKLKELVPCVLLSFDDEQILTWR 177
            NG+Y++LV DVR AFEGS LVKIDC GMH SDYKK+GAKLKELVPCVLLSFD+EQIL WR
Sbjct: 337  NGVYISLVNDVRHAFEGSILVKIDCTGMHESDYKKLGAKLKELVPCVLLSFDNEQILMWR 396

Query: 176  GEEWKSMY-PEAPPTVPVSNHSNDS-----ASLNSGELHSANERLVPELEISSPKFLSRW 15
            G++WKS+   +    +P    SNDS      SL + +L   N   +     +SPK    W
Sbjct: 397  GKDWKSIISDDRSAPLPSRASSNDSLGSPGESLENSDLLHGNHHTIK----TSPKMKLLW 452

Query: 14   KRAI 3
            + AI
Sbjct: 453  EHAI 456


>ref|XP_004509634.1| PREDICTED: CRS2-associated factor 2, chloroplastic [Cicer arietinum]
          Length = 556

 Score =  630 bits (1625), Expect = e-177
 Identities = 308/409 (75%), Positives = 344/409 (84%), Gaps = 3/409 (0%)
 Frame = -3

Query: 1220 PPNESTTTT--SPAFKSFHRRTKYYKPVS-DGVISSEGDRSVIIGESGVSYSLPGAPFEF 1050
            PP +S T    +PA K +HR +KYYKP+  +GV++S+GDRSVIIGESGVSY LPGAPFEF
Sbjct: 45   PPKKSQTPPPPNPALK-YHRNSKYYKPIQQNGVLTSDGDRSVIIGESGVSYLLPGAPFEF 103

Query: 1049 QFSYSETPKVKPLAIREPAFLPFAPPTMPRPWTGKAPLKKSKKNIPLFDSFNPPPVGMKG 870
            QFSYSETPKVKPLAIREPAFLPF PPTMPRPWTGKAPLKKSKKNIPLFDSFNPPP GMKG
Sbjct: 104  QFSYSETPKVKPLAIREPAFLPFEPPTMPRPWTGKAPLKKSKKNIPLFDSFNPPPPGMKG 163

Query: 869  VKQVEMPGPFPLGRFPKEGMTREEILGERLTKEEVRMLVKPHLSHNRQVNLGRDGLTHNM 690
            VKQVEMPGPFP+G+FP+EGM+REEILGE L + E++MLVKP  S NRQVNLGRDGLTHNM
Sbjct: 164  VKQVEMPGPFPVGKFPEEGMSREEILGEPLKRWEIQMLVKPMTSDNRQVNLGRDGLTHNM 223

Query: 689  LELIHEHWKRQRICKVRCRGVPTVDMDNVCYHLEEKTGGKIIHRVGGVLYLFRGRNYNYR 510
            LELIH HWKR+R+CK+RC+GVPTVDMDNVC H+EEK GGKIIHRVGGV+YLFRGRNYNYR
Sbjct: 224  LELIHSHWKRRRVCKIRCKGVPTVDMDNVCRHIEEKAGGKIIHRVGGVVYLFRGRNYNYR 283

Query: 509  TRPQYPVMLWKPATPVYPKLIQEAPEGLTKFEAADMIKKGKNLLPICKLAKNGIYMNLVK 330
            TRPQYPVMLWKPA PVYPKLIQ+AP GL K EA  + KKGK++LPICKLAKNG+Y +LVK
Sbjct: 284  TRPQYPVMLWKPAAPVYPKLIQDAPGGLAKAEADGLRKKGKSMLPICKLAKNGVYTSLVK 343

Query: 329  DVRDAFEGSPLVKIDCRGMHASDYKKIGAKLKELVPCVLLSFDDEQILTWRGEEWKSMYP 150
            DVRDAFEGSPLVKIDC+G+  SDYKK+GAKLK+LVPCVLLSFDDEQIL WRG+EWKS YP
Sbjct: 344  DVRDAFEGSPLVKIDCKGLDPSDYKKLGAKLKDLVPCVLLSFDDEQILMWRGKEWKSKYP 403

Query: 149  EAPPTVPVSNHSNDSASLNSGELHSANERLVPELEISSPKFLSRWKRAI 3
            +AP   P  N  N     ++   H  N          SPK LS WK AI
Sbjct: 404  QAPVFTP--NLDNTGKVGDNQSNHIGN---------ISPKMLSLWKSAI 441


>ref|XP_010026662.1| PREDICTED: CRS2-associated factor 2, chloroplastic, partial
            [Eucalyptus grandis]
          Length = 514

 Score =  624 bits (1609), Expect = e-176
 Identities = 306/411 (74%), Positives = 343/411 (83%), Gaps = 5/411 (1%)
 Frame = -3

Query: 1220 PPNESTTTTSPAFKSFHRRTKYYKPV--SDGVISSEGDRSVIIGESGVSYSLPGAPFEFQ 1047
            PPN       PAFK+ HR ++YYKP+     V+SS+GDRSV++GESGVSY LPGAPFEFQ
Sbjct: 5    PPN-------PAFKTPHRNSRYYKPIRPDSPVVSSDGDRSVVVGESGVSYLLPGAPFEFQ 57

Query: 1046 FSYSETPKVKPLAIREPAFLPFAPPTMPRPWTGKAPLKKSK---KNIPLFDSFNPPPVGM 876
            +SYSETP  +PLA+REPAFLPFAPPTMPRPWTGKAPLK SK   K IPLFDSF+PPP G 
Sbjct: 58   YSYSETPSARPLAMREPAFLPFAPPTMPRPWTGKAPLKGSKEKKKKIPLFDSFDPPPAGK 117

Query: 875  KGVKQVEMPGPFPLGRFPKEGMTREEILGERLTKEEVRMLVKPHLSHNRQVNLGRDGLTH 696
            KGVK VEMPGPF LG+ PK+G TREEILGE L + E++MLVKPHLS NRQVNLGRDGLTH
Sbjct: 118  KGVKYVEMPGPFHLGQRPKDGRTREEILGEPLKRWEIKMLVKPHLSDNRQVNLGRDGLTH 177

Query: 695  NMLELIHEHWKRQRICKVRCRGVPTVDMDNVCYHLEEKTGGKIIHRVGGVLYLFRGRNYN 516
            NMLEL+H HWKR+R+CKVRCRGVPTVDMDNVC  LEEKTGG+IIHRVGG++YLFRGRNYN
Sbjct: 178  NMLELVHSHWKRRRVCKVRCRGVPTVDMDNVCQRLEEKTGGRIIHRVGGIVYLFRGRNYN 237

Query: 515  YRTRPQYPVMLWKPATPVYPKLIQEAPEGLTKFEAADMIKKGKNLLPICKLAKNGIYMNL 336
            YRTRPQYP+MLWKPA PVYPKLIQEAPEGLTK EA ++ K+GKNLLPICKLAKNGIY+ L
Sbjct: 238  YRTRPQYPLMLWKPAAPVYPKLIQEAPEGLTKAEADNLRKRGKNLLPICKLAKNGIYLTL 297

Query: 335  VKDVRDAFEGSPLVKIDCRGMHASDYKKIGAKLKELVPCVLLSFDDEQILTWRGEEWKSM 156
            VKDVR+AFEGSPLVKIDCRGMHASDYKK+GAKLK+LVPCVLLSFDDEQIL WRG++WKSM
Sbjct: 298  VKDVRNAFEGSPLVKIDCRGMHASDYKKLGAKLKDLVPCVLLSFDDEQILMWRGKDWKSM 357

Query: 155  YPEAPPTVPVSNHSNDSASLNSGELHSANERLVPELEISSPKFLSRWKRAI 3
            YPE  PTVP++           GE   A +       ISSPK  S W+RAI
Sbjct: 358  YPE--PTVPLA---------EKGETDDACKVRDVNKVISSPKMTSLWERAI 397


>ref|XP_010270955.1| PREDICTED: CRS2-associated factor 2, chloroplastic [Nelumbo nucifera]
          Length = 562

 Score =  623 bits (1607), Expect = e-175
 Identities = 307/410 (74%), Positives = 346/410 (84%), Gaps = 1/410 (0%)
 Frame = -3

Query: 1229 IKQPPNESTTTTSPAFKSFHRRTKYYKPVSDGVISSEGDRSVIIGESGVSYSLPGAPFEF 1050
            + Q    S  +++PAFKS HRRTKY+KPVSDGVI+S+GDR+V++GESGVSY LPGAPFEF
Sbjct: 54   LSQSEQPSHNSSNPAFKSVHRRTKYHKPVSDGVIASDGDRAVVVGESGVSYLLPGAPFEF 113

Query: 1049 QFSYSETPKVKPLAIREPAFLPFAPPTMPRPWTGKAPLKKSKKNIPLFDSFNPPPVGMKG 870
            QFSYSETPKVKPLAIREPAFLPFAP TMPRPWTGKAPLK+ KK IPLFDSFNPPP   KG
Sbjct: 114  QFSYSETPKVKPLAIREPAFLPFAPQTMPRPWTGKAPLKEKKKKIPLFDSFNPPPPETKG 173

Query: 869  VKQVEMPGPFPLGRFPKEGMTREEILGERLTKEEVRMLVKPHLSHNRQVNLGRDGLTHNM 690
            VK +EMP PF LG FPKEG TREEILG+ LTK EVR LVKP LSHNRQVNLGRDGLTHNM
Sbjct: 174  VKHLEMPRPFVLGEFPKEGKTREEILGKPLTKAEVRALVKPLLSHNRQVNLGRDGLTHNM 233

Query: 689  LELIHEHWKRQRICKVRCRGVPTVDMDNVCYHLEEKTGGKIIHRVGGVLYLFRGRNYNYR 510
            LELIH HW+RQ +CKVRCRGVPTVDM NVC+HLEEK GGKIIH+VGGV+YLFRGRNY+++
Sbjct: 234  LELIHSHWRRQPVCKVRCRGVPTVDMRNVCHHLEEKAGGKIIHQVGGVIYLFRGRNYDHQ 293

Query: 509  TRPQYPVMLWKPATPVYPKLIQEAPEGLTKFEAADMIKKGKNLLPICKLAKNGIYMNLVK 330
            TRP+YP+MLWKPATPVYPKLIQEAPEGLTK EA D+  KGK+LLPICKLAKNG+Y+NLVK
Sbjct: 294  TRPRYPIMLWKPATPVYPKLIQEAPEGLTKLEADDLRAKGKSLLPICKLAKNGVYINLVK 353

Query: 329  DVRDAFEGSPLVKIDCRGMHASDYKKIGAKLKELVPCVLLSFDDEQILTWRGEEWKSMYP 150
            DVR+AFE S LVKIDC GMHASDYKKIGAKLKELVPCVLLSFDDEQIL WRG  WKSM  
Sbjct: 354  DVRNAFEESTLVKIDCTGMHASDYKKIGAKLKELVPCVLLSFDDEQILMWRGRYWKSM-- 411

Query: 149  EAPPTVPVSNHSNDSASLN-SGELHSANERLVPELEISSPKFLSRWKRAI 3
                +   S  S  S+ L+ +G++  A   +  + EISS + +S WK+AI
Sbjct: 412  ----SADHSTGSGISSGLDCTGKVEDARP-VDRKTEISSHRMMSLWKQAI 456


>ref|XP_012479367.1| PREDICTED: CRS2-associated factor 2, chloroplastic [Gossypium
            raimondii] gi|823159075|ref|XP_012479368.1| PREDICTED:
            CRS2-associated factor 2, chloroplastic [Gossypium
            raimondii] gi|823159077|ref|XP_012479369.1| PREDICTED:
            CRS2-associated factor 2, chloroplastic [Gossypium
            raimondii] gi|763763952|gb|KJB31206.1| hypothetical
            protein B456_005G181000 [Gossypium raimondii]
          Length = 563

 Score =  622 bits (1605), Expect = e-175
 Identities = 299/408 (73%), Positives = 341/408 (83%), Gaps = 3/408 (0%)
 Frame = -3

Query: 1217 PNESTTTTSPAFKSFHRRTKYYKPVSDGVISSEGDRSVIIGESGVSYSLPGAPFEFQFSY 1038
            P  +   ++PA    HRR+ Y KPV  GVIS++GDR VI+GE+GVSY LPGAPFEFQ+SY
Sbjct: 49   PKTNVPRSNPALSIPHRRSNYRKPVQKGVISTDGDRCVIVGENGVSYKLPGAPFEFQYSY 108

Query: 1037 SETPKVKPLAIREPAFLPFAPPTMPRPWTGKAPLKKSKKNIPLFDSFNPPPVGMKGVKQV 858
            SETP  +P+AIREPA+LPFAPPTMPRPWTGKAPLKKSKKNIPLFDSFNPPP G KGVK V
Sbjct: 109  SETPSAEPIAIREPAYLPFAPPTMPRPWTGKAPLKKSKKNIPLFDSFNPPPPGKKGVKHV 168

Query: 857  EMPGPFPLGRFPKEGMTREEILGERLTKEEVRMLVKPHLSHNRQVNLGRDGLTHNMLELI 678
            E PGPFP G++PKEG TREEILGE L K E++MLVKP LS+NRQVNLGRDGLTHNML+LI
Sbjct: 169  EKPGPFPFGKYPKEGKTREEILGEPLKKWEIKMLVKPLLSYNRQVNLGRDGLTHNMLDLI 228

Query: 677  HEHWKRQRICKVRCRGVPTVDMDNVCYHLEEKTGGKIIHRVGGVLYLFRGRNYNYRTRPQ 498
            H HWKR+R+CK++C+GVPTVDMDNVC H+EEKTGGKIIHRVGGV+YLFRGRNYNYRTRPQ
Sbjct: 229  HSHWKRRRVCKIKCKGVPTVDMDNVCRHIEEKTGGKIIHRVGGVVYLFRGRNYNYRTRPQ 288

Query: 497  YPVMLWKPATPVYPKLIQEAPEGLTKFEAADMIKKGKNLLPICKLAKNGIYMNLVKDVRD 318
            YPVMLWKPATPVYPKLIQEAPEGLTK EA +  KKGK+LLPIC LAKNG+Y +LVKDVRD
Sbjct: 289  YPVMLWKPATPVYPKLIQEAPEGLTKAEADEFRKKGKSLLPICTLAKNGVYASLVKDVRD 348

Query: 317  AFEGSPLVKIDCRGMHASDYKKIGAKLKELVPCVLLSFDDEQILTWRGEEWKSMYPEAPP 138
            AFE  PLVKIDC+G+  SDYKKIGAKLKELVPCVLLSFDDEQIL WRG +WKSMY +   
Sbjct: 349  AFEECPLVKIDCKGLQPSDYKKIGAKLKELVPCVLLSFDDEQILMWRGRDWKSMYGDTSS 408

Query: 137  T-VPVSNHSNDSASLNSGELHSANERLVPELE--ISSPKFLSRWKRAI 3
            T VPV     D +S       S+++   P+ +  +SSPK +S W+RAI
Sbjct: 409  TLVPV---KADISSGIDNSAKSSDDSGTPDAQRVVSSPKMISLWRRAI 453


>gb|KJB31209.1| hypothetical protein B456_005G181000 [Gossypium raimondii]
          Length = 558

 Score =  622 bits (1603), Expect = e-175
 Identities = 299/408 (73%), Positives = 343/408 (84%), Gaps = 3/408 (0%)
 Frame = -3

Query: 1217 PNESTTTTSPAFKSFHRRTKYYKPVSDGVISSEGDRSVIIGESGVSYSLPGAPFEFQFSY 1038
            P  +   ++PA    HRR+ Y KPV  GVIS++GDR VI+GE+GVSY LPGAPFEFQ+SY
Sbjct: 49   PKTNVPRSNPALSIPHRRSNYRKPVQKGVISTDGDRCVIVGENGVSYKLPGAPFEFQYSY 108

Query: 1037 SETPKVKPLAIREPAFLPFAPPTMPRPWTGKAPLKKSKKNIPLFDSFNPPPVGMKGVKQV 858
            SETP  +P+AIREPA+LPFAPPTMPRPWTGKAPLKKSKKNIPLFDSFNPPP G KGVK V
Sbjct: 109  SETPSAEPIAIREPAYLPFAPPTMPRPWTGKAPLKKSKKNIPLFDSFNPPPPGKKGVKHV 168

Query: 857  EMPGPFPLGRFPKEGMTREEILGERLTKEEVRMLVKPHLSHNRQVNLGRDGLTHNMLELI 678
            E PGPFP G++PKEG TREEILGE L K E++MLVKP LS+NRQVNLGRDGLTHNML+LI
Sbjct: 169  EKPGPFPFGKYPKEGKTREEILGEPLKKWEIKMLVKPLLSYNRQVNLGRDGLTHNMLDLI 228

Query: 677  HEHWKRQRICKVRCRGVPTVDMDNVCYHLEEKTGGKIIHRVGGVLYLFRGRNYNYRTRPQ 498
            H HWKR+R+CK++C+GVPTVDMDNVC H+EEKTGGKIIHRVGGV+YLFRGRNYNYRTRPQ
Sbjct: 229  HSHWKRRRVCKIKCKGVPTVDMDNVCRHIEEKTGGKIIHRVGGVVYLFRGRNYNYRTRPQ 288

Query: 497  YPVMLWKPATPVYPKLIQEAPEGLTKFEAADMIKKGKNLLPICKLAKNGIYMNLVKDVRD 318
            YPVMLWKPATPVYPKLIQEAPEGLTK EA +  KKGK+LLPIC LAKNG+Y +LVKDVRD
Sbjct: 289  YPVMLWKPATPVYPKLIQEAPEGLTKAEADEFRKKGKSLLPICTLAKNGVYASLVKDVRD 348

Query: 317  AFEGSPLVKIDCRGMHASDYKKIGAKLKELVPCVLLSFDDEQILTWRGEEWKSMYPEAPP 138
            AFE  PLVKIDC+G+  SDYKKIGAKLKELVPCVLLSFDDEQIL WRG +WKSMY +   
Sbjct: 349  AFEECPLVKIDCKGLQPSDYKKIGAKLKELVPCVLLSFDDEQILMWRGRDWKSMYGDTSS 408

Query: 137  T-VPVSNHSNDSASLNSGELHSANERLVPELE--ISSPKFLSRWKRAI 3
            T VPV       A ++S +  S+++   P+ +  +SSPK +S W+RAI
Sbjct: 409  TLVPV------KADISSAK--SSDDSGTPDAQRVVSSPKMISLWRRAI 448


>ref|XP_013446181.1| CRS2-associated factor 1 [Medicago truncatula]
            gi|657374680|gb|KEH20208.1| CRS2-associated factor 1
            [Medicago truncatula]
          Length = 574

 Score =  621 bits (1601), Expect = e-175
 Identities = 303/414 (73%), Positives = 343/414 (82%), Gaps = 1/414 (0%)
 Frame = -3

Query: 1241 QKSIIKQPPNESTTTTSPAFKSFHRRTKYYKPVSDGV-ISSEGDRSVIIGESGVSYSLPG 1065
            +KS    PPN +     PA K  HR +KYYKP++    I S  DRSVIIGESGVSY LPG
Sbjct: 47   RKSHPPPPPNPN-----PALKH-HRNSKYYKPITHPTTIPSSDDRSVIIGESGVSYLLPG 100

Query: 1064 APFEFQFSYSETPKVKPLAIREPAFLPFAPPTMPRPWTGKAPLKKSKKNIPLFDSFNPPP 885
            APFEFQFSYSETPKVKP+AIREPAFLPF PPTMPRPWTGKAPLKKSKKNIPLFDSFNPPP
Sbjct: 101  APFEFQFSYSETPKVKPIAIREPAFLPFEPPTMPRPWTGKAPLKKSKKNIPLFDSFNPPP 160

Query: 884  VGMKGVKQVEMPGPFPLGRFPKEGMTREEILGERLTKEEVRMLVKPHLSHNRQVNLGRDG 705
             GMKGVK+VEMPGPFP+G+FP+EG++REEILGE L K EV+MLVKP ++ NRQVNLGRDG
Sbjct: 161  EGMKGVKKVEMPGPFPVGKFPEEGVSREEILGEPLKKWEVQMLVKPMMADNRQVNLGRDG 220

Query: 704  LTHNMLELIHEHWKRQRICKVRCRGVPTVDMDNVCYHLEEKTGGKIIHRVGGVLYLFRGR 525
            LTHNMLELIH HWKR+R+CK+RC+GVPTVDMDNVC H+EEK GGKIIHR GGV+YLFRGR
Sbjct: 221  LTHNMLELIHSHWKRRRVCKIRCKGVPTVDMDNVCRHIEEKAGGKIIHRAGGVVYLFRGR 280

Query: 524  NYNYRTRPQYPVMLWKPATPVYPKLIQEAPEGLTKFEAADMIKKGKNLLPICKLAKNGIY 345
            NYNYRTRPQYPVMLWKPA PVYPKLIQ+APEGLTK EA ++  KGK+LLPICKLAKNG+Y
Sbjct: 281  NYNYRTRPQYPVMLWKPAAPVYPKLIQDAPEGLTKAEADELRMKGKSLLPICKLAKNGVY 340

Query: 344  MNLVKDVRDAFEGSPLVKIDCRGMHASDYKKIGAKLKELVPCVLLSFDDEQILTWRGEEW 165
              LVKDVRDAFEGS LVKIDC+G+  SDYKK+GAKLK+LVPCVLLSFDDEQ+L WRG+ W
Sbjct: 341  TTLVKDVRDAFEGSHLVKIDCKGLDPSDYKKLGAKLKDLVPCVLLSFDDEQVLIWRGKGW 400

Query: 164  KSMYPEAPPTVPVSNHSNDSASLNSGELHSANERLVPELEISSPKFLSRWKRAI 3
            KSMYP+A P  P +  +      N GE+     + + E+   SPK LS W+ AI
Sbjct: 401  KSMYPQA-PVFPPAEATITRDLENKGEVDDNQSKHISEMVSISPKMLSLWRSAI 453


>gb|KHG22318.1| hypothetical protein F383_04491 [Gossypium arboreum]
          Length = 563

 Score =  617 bits (1591), Expect = e-174
 Identities = 298/408 (73%), Positives = 338/408 (82%), Gaps = 3/408 (0%)
 Frame = -3

Query: 1217 PNESTTTTSPAFKSFHRRTKYYKPVSDGVISSEGDRSVIIGESGVSYSLPGAPFEFQFSY 1038
            P  +   ++PA    HRR+ Y KPV  GVIS++GDR VI+GE+GVSY LPGAPFEFQ+SY
Sbjct: 49   PKTNVPRSNPALSIPHRRSNYRKPVQKGVISTDGDRCVIVGENGVSYKLPGAPFEFQYSY 108

Query: 1037 SETPKVKPLAIREPAFLPFAPPTMPRPWTGKAPLKKSKKNIPLFDSFNPPPVGMKGVKQV 858
            SETP  +P+AIREPA+LPFAPPTMPRPWTGKAPLKKSKKNIPLFDSFNPPP G KGVK V
Sbjct: 109  SETPNAEPIAIREPAYLPFAPPTMPRPWTGKAPLKKSKKNIPLFDSFNPPPPGKKGVKHV 168

Query: 857  EMPGPFPLGRFPKEGMTREEILGERLTKEEVRMLVKPHLSHNRQVNLGRDGLTHNMLELI 678
            E PGPFP G++PKEG TREEILGE L K E++MLVKP LS NRQVNLGRDGLTHNML+LI
Sbjct: 169  EKPGPFPFGKYPKEGKTREEILGEPLKKWEIKMLVKPLLSDNRQVNLGRDGLTHNMLDLI 228

Query: 677  HEHWKRQRICKVRCRGVPTVDMDNVCYHLEEKTGGKIIHRVGGVLYLFRGRNYNYRTRPQ 498
            H HWKR+R+CK++C+GVPTVDMDNVC H+EEKTGGKIIHRVGGV+YLFRGRNYNYRTRPQ
Sbjct: 229  HTHWKRRRVCKIKCKGVPTVDMDNVCRHIEEKTGGKIIHRVGGVVYLFRGRNYNYRTRPQ 288

Query: 497  YPVMLWKPATPVYPKLIQEAPEGLTKFEAADMIKKGKNLLPICKLAKNGIYMNLVKDVRD 318
            YPVMLWKPATPVYPKLIQEAPEGLTK EA +  KKGK+LLPIC LAKNG+Y +LVKDVRD
Sbjct: 289  YPVMLWKPATPVYPKLIQEAPEGLTKAEADEFRKKGKSLLPICTLAKNGMYASLVKDVRD 348

Query: 317  AFEGSPLVKIDCRGMHASDYKKIGAKLKELVPCVLLSFDDEQILTWRGEEWKSMYPEAPP 138
            AFE  PLVKIDC+G+  SDYKKIGAKLKELVPCVLLSFDDEQIL WRG +WKSMY +   
Sbjct: 349  AFEECPLVKIDCKGLQPSDYKKIGAKLKELVPCVLLSFDDEQILMWRGRDWKSMYRDTSS 408

Query: 137  T-VPVSNHSNDSASLNSGELHSANERLVPELE--ISSPKFLSRWKRAI 3
              VPV     D  S       S+++   P+ +  +SSPK +S W+RAI
Sbjct: 409  NLVPV---KADILSGIDNSAKSSDDSGTPDSQRVVSSPKMMSLWRRAI 453


>ref|XP_002893285.1| hypothetical protein ARALYDRAFT_335585 [Arabidopsis lyrata subsp.
            lyrata] gi|297339127|gb|EFH69544.1| hypothetical protein
            ARALYDRAFT_335585 [Arabidopsis lyrata subsp. lyrata]
          Length = 565

 Score =  615 bits (1586), Expect = e-173
 Identities = 293/399 (73%), Positives = 333/399 (83%), Gaps = 1/399 (0%)
 Frame = -3

Query: 1196 TSPAFKSFHRRTKYYKPVSDGVISSEGDRSVIIGESGVSYSLPGAPFEFQFSYSETPKVK 1017
            ++PA K  H RT+YYKPV +GVISS+GDR+++IGESGVSY LPGAPFEFQFSYSETPK K
Sbjct: 67   SNPALKLPHHRTRYYKPVKEGVISSDGDRTIVIGESGVSYQLPGAPFEFQFSYSETPKAK 126

Query: 1016 PLAIREPAFLPFAPPTMPRPWTGKAPLKKSKKNIPLFDSFNPPPVGMKGVKQVEMPGPFP 837
            P+ IREPAF+PFAPPTMPRPWTGKAPLKKSKK IPLFDSFNPPP G  GVK VEMPGP P
Sbjct: 127  PVGIREPAFMPFAPPTMPRPWTGKAPLKKSKKKIPLFDSFNPPPAGKSGVKYVEMPGPLP 186

Query: 836  LGRFPKEGMTREEILGERLTKEEVRMLVKPHLSHNRQVNLGRDGLTHNMLELIHEHWKRQ 657
             GR+PKEGM REEILGE L K E  ML+KPH+  NRQVNLGRDG THNMLELIH HWKR+
Sbjct: 187  FGRYPKEGMNREEILGEPLKKWEKGMLIKPHMHDNRQVNLGRDGFTHNMLELIHSHWKRR 246

Query: 656  RICKVRCRGVPTVDMDNVCYHLEEKTGGKIIHRVGGVLYLFRGRNYNYRTRPQYPVMLWK 477
            R+CKVRC+GVPTVDMDNVC  LEEKTGG+IIHRVGGV+YLFRGRNYNYRTRPQYP+MLWK
Sbjct: 247  RVCKVRCKGVPTVDMDNVCRVLEEKTGGEIIHRVGGVVYLFRGRNYNYRTRPQYPLMLWK 306

Query: 476  PATPVYPKLIQEAPEGLTKFEAADMIKKGKNLLPICKLAKNGIYMNLVKDVRDAFEGSPL 297
            PA PVYPKLIQE PEGLTK EA +   KGK+L PICKL+KNG+Y++LVKDVRDAFE SPL
Sbjct: 307  PAAPVYPKLIQEVPEGLTKEEALEFRVKGKSLRPICKLSKNGVYVSLVKDVRDAFELSPL 366

Query: 296  VKIDCRGMHASDYKKIGAKLKELVPCVLLSFDDEQILTWRGEEWKSMYPEAPPTVPVSNH 117
            VK+DC G+  SDYKKIGAKLKELVPCVLLSFDDEQIL WRG +WKS + +  P +P  + 
Sbjct: 367  VKVDCPGLEPSDYKKIGAKLKELVPCVLLSFDDEQILMWRGRDWKSRFVD-NPLIPSLSE 425

Query: 116  SNDSASLNSGELHSANERLV-PELEISSPKFLSRWKRAI 3
            +N +  L+  +  S  + +  P   ISSPK +S WKRA+
Sbjct: 426  TNIANELDPSDKPSDEQTVSDPSSTISSPKMISLWKRAL 464


>ref|XP_006416086.1| hypothetical protein EUTSA_v10007246mg [Eutrema salsugineum]
            gi|557093857|gb|ESQ34439.1| hypothetical protein
            EUTSA_v10007246mg [Eutrema salsugineum]
          Length = 563

 Score =  615 bits (1585), Expect = e-173
 Identities = 295/402 (73%), Positives = 338/402 (84%), Gaps = 4/402 (0%)
 Frame = -3

Query: 1196 TSPAFKSFHRRTKYYKPVSDGVISSEGDRSVIIGESGVSYSLPGAPFEFQFSYSETPKVK 1017
            ++PA K  HRRT+YYKPV +GVISS+G+R+++IG+SGVSY LPGAPFEFQFSYSETPK K
Sbjct: 64   SNPALKLPHRRTRYYKPVKEGVISSDGERTIVIGDSGVSYQLPGAPFEFQFSYSETPKAK 123

Query: 1016 PLAIREPAFLPFAPPTMPRPWTGKAPLKKSKKNIPLFDSFNPPPVGMKGVKQVEMPGPFP 837
            P+ IREPAFLPFAPPTMPRPWTGKAPLKKSKK IPLFDSFNPPP G  GVK VEMPGP+P
Sbjct: 124  PVGIREPAFLPFAPPTMPRPWTGKAPLKKSKKKIPLFDSFNPPPAGKSGVKYVEMPGPYP 183

Query: 836  LGRFPKEGMTREEILGERLTKEEVRMLVKPHLSHNRQVNLGRDGLTHNMLELIHEHWKRQ 657
             GR+PKE MTR+EILGE L K E  ML+KPH+  NRQVNLGRDG THNMLELIH HWKR+
Sbjct: 184  FGRYPKEAMTRDEILGEPLKKWEKGMLIKPHMHDNRQVNLGRDGFTHNMLELIHSHWKRR 243

Query: 656  RICKVRCRGVPTVDMDNVCYHLEEKTGGKIIHRVGGVLYLFRGRNYNYRTRPQYPVMLWK 477
            R+CKVRC+GVPTVDMDNVC  LEEKTGG+IIHRVGGV+YLFRGRNYNYRTRPQYP+MLWK
Sbjct: 244  RVCKVRCKGVPTVDMDNVCRVLEEKTGGEIIHRVGGVVYLFRGRNYNYRTRPQYPLMLWK 303

Query: 476  PATPVYPKLIQEAPEGLTKFEAADMIKKGKNLLPICKLAKNGIYMNLVKDVRDAFEGSPL 297
            PA PVYPKLIQE PEGLTK EA +   KGK+L PICKL+KNG+Y++LVKDVRDAFE SPL
Sbjct: 304  PAAPVYPKLIQEIPEGLTKDEAHEFRVKGKSLKPICKLSKNGVYVSLVKDVRDAFELSPL 363

Query: 296  VKIDCRGMHASDYKKIGAKLKELVPCVLLSFDDEQILTWRGEEWKSMYPEAPPTVPVSNH 117
            VK+DC G+  SDYKKIGAKLKELVPCVLLSFDDEQIL WRG +WKS + + P T P+ + 
Sbjct: 364  VKVDCPGLEPSDYKKIGAKLKELVPCVLLSFDDEQILMWRGRDWKSRFLDNPLT-PLLSE 422

Query: 116  SNDSASLN----SGELHSANERLVPELEISSPKFLSRWKRAI 3
            +N    L+    +GE  +A++   P   ISSPK +S WKRA+
Sbjct: 423  TNIEDELDPSDKTGEEQTASD---PNTVISSPKMISLWKRAL 461


>ref|XP_006438328.1| hypothetical protein CICLE_v10031138mg [Citrus clementina]
            gi|557540524|gb|ESR51568.1| hypothetical protein
            CICLE_v10031138mg [Citrus clementina]
          Length = 552

 Score =  613 bits (1581), Expect = e-172
 Identities = 298/411 (72%), Positives = 339/411 (82%), Gaps = 3/411 (0%)
 Frame = -3

Query: 1226 KQPPNESTTTT--SPAFKSFHRRTKYYKPVSDGVISSEGDRSVIIGESGVSYSLPGAPFE 1053
            K PP E    +  +PAFK  HR T+YYKPV+ GVISS+GDR V IGESGVSY LPGAPFE
Sbjct: 40   KYPPKERKPKSRPNPAFKLPHRHTRYYKPVNPGVISSDGDRGVTIGESGVSYRLPGAPFE 99

Query: 1052 FQFSYSETPKVKPLAIREPAFLPFAPPTMPRPWTGKAPLKKSKKNIPLFDSFNPPPVGMK 873
            FQ+SY+ETP+ KPLAIREPAFLPF PPTMPRPWTGK PLKKSKK IPLFDSFNPP  G K
Sbjct: 100  FQYSYTETPQAKPLAIREPAFLPFGPPTMPRPWTGKQPLKKSKKKIPLFDSFNPPLPGKK 159

Query: 872  GVKQVEMPGPFPLGRFPKEGMTREEILGERLTKEEVRMLVKPHLSHNRQVNLGRDGLTHN 693
            GVK VEMPGPFPLG++P+EG TREEILGE L + E+ MLVKP L  NRQVNLGRDGLTHN
Sbjct: 160  GVKHVEMPGPFPLGKYPQEGKTREEILGEPLKRWEISMLVKPLLKDNRQVNLGRDGLTHN 219

Query: 692  MLELIHEHWKRQRICKVRCRGVPTVDMDNVCYHLEEKTGGKIIHRVGGVLYLFRGRNYNY 513
            MLELIH HWKR+R+ K++C+GVPTVDMDNVC  LEEKTGGKII RVGG++YLFRGRNYNY
Sbjct: 220  MLELIHSHWKRRRVIKIKCKGVPTVDMDNVCRRLEEKTGGKIIFRVGGLVYLFRGRNYNY 279

Query: 512  RTRPQYPVMLWKPATPVYPKLIQEAPEGLTKFEAADMIKKGKNLLPICKLAKNGIYMNLV 333
            RTRPQYP+MLWKPA PVYPKLIQEAPEGLTK EA ++ +KGK+LLPICKLAKNG+Y+ LV
Sbjct: 280  RTRPQYPLMLWKPAAPVYPKLIQEAPEGLTKHEADELRRKGKSLLPICKLAKNGVYLTLV 339

Query: 332  KDVRDAFEGSPLVKIDCRGMHASDYKKIGAKLKELVPCVLLSFDDEQILTWRGEEWKSMY 153
            +DVR+AFEGS LVK++C+GMHASDYKK+GAKLKELVPCVLLSFDDEQIL WRG++WKSMY
Sbjct: 340  RDVRNAFEGSSLVKVNCKGMHASDYKKLGAKLKELVPCVLLSFDDEQILMWRGKDWKSMY 399

Query: 152  PEAPP-TVPVSNHSNDSASLNSGELHSANERLVPELEISSPKFLSRWKRAI 3
            PE P  + PV       A  +       ++  +     SSPK +S WKRAI
Sbjct: 400  PEPPSFSNPVDLDIAGDADGSGTPSDDPSQGTIR----SSPKMISLWKRAI 446


>ref|XP_010477635.1| PREDICTED: CRS2-associated factor 2, chloroplastic [Camelina sativa]
          Length = 562

 Score =  612 bits (1579), Expect = e-172
 Identities = 295/409 (72%), Positives = 336/409 (82%), Gaps = 1/409 (0%)
 Frame = -3

Query: 1226 KQPPNESTTTTSPAFKSFHRRTKYYKPVSDGVISSEGDRSVIIGESGVSYSLPGAPFEFQ 1047
            K+PP  +     PA K  H RT+YYKPV +GVISS+GDR+++IG+SGVSY LPGAPFEFQ
Sbjct: 58   KKPPQPN-----PALKLPHHRTRYYKPVKEGVISSDGDRTIVIGDSGVSYQLPGAPFEFQ 112

Query: 1046 FSYSETPKVKPLAIREPAFLPFAPPTMPRPWTGKAPLKKSKKNIPLFDSFNPPPVGMKGV 867
            FSYSETPKVKP+ IREPAF+PFAPPTMPRPWTGKAPLKKSKK IPLFDSFNPPP G  GV
Sbjct: 113  FSYSETPKVKPVGIREPAFMPFAPPTMPRPWTGKAPLKKSKKKIPLFDSFNPPPAGKAGV 172

Query: 866  KQVEMPGPFPLGRFPKEGMTREEILGERLTKEEVRMLVKPHLSHNRQVNLGRDGLTHNML 687
            K VEMPGP P GR+PKEGM R+E+LGE L + E  ML+KPH+  NRQVNLGRDG THNML
Sbjct: 173  KYVEMPGPLPFGRYPKEGMNRDEVLGEPLKRWEKGMLIKPHMHDNRQVNLGRDGFTHNML 232

Query: 686  ELIHEHWKRQRICKVRCRGVPTVDMDNVCYHLEEKTGGKIIHRVGGVLYLFRGRNYNYRT 507
            ELIH HWKR+R+CKVRC+GVPTVDMDNVC  LEEKTGG+IIHRVGGV+YLFRGRNYNYRT
Sbjct: 233  ELIHSHWKRRRVCKVRCKGVPTVDMDNVCRVLEEKTGGEIIHRVGGVVYLFRGRNYNYRT 292

Query: 506  RPQYPVMLWKPATPVYPKLIQEAPEGLTKFEAADMIKKGKNLLPICKLAKNGIYMNLVKD 327
            RPQYP+MLWKPA PVYPKLIQE PEGLTK EA +   KGK+L PICKL+KNG+Y++LVKD
Sbjct: 293  RPQYPLMLWKPAAPVYPKLIQEIPEGLTKEEAHEFRVKGKSLRPICKLSKNGVYVSLVKD 352

Query: 326  VRDAFEGSPLVKIDCRGMHASDYKKIGAKLKELVPCVLLSFDDEQILTWRGEEWKSMYPE 147
            VRDAFE S LVKIDC G+  SDYKKIGAKLKELVPCVLLSFDDEQIL WRG EWKS + +
Sbjct: 353  VRDAFELSSLVKIDCPGLEPSDYKKIGAKLKELVPCVLLSFDDEQILMWRGREWKSRFLD 412

Query: 146  APPTVPVSNHSNDSASLNSGELHSANERLV-PELEISSPKFLSRWKRAI 3
              P +P  + +N +  L+  +  S  E +  P   ISSPK +S WKRA+
Sbjct: 413  -NPLIPNLSETNKANELDPSDKPSKEETVSNPNTVISSPKMISLWKRAL 460


>ref|NP_173754.2| CRS2-associated factor 2 [Arabidopsis thaliana]
            gi|75173812|sp|Q9LDA9.1|CAF2P_ARATH RecName:
            Full=CRS2-associated factor 2, chloroplastic; AltName:
            Full=Chloroplastic group IIA intron splicing facilitator
            CRS2-associated factor 2; Flags: Precursor
            gi|8778588|gb|AAF79596.1|AC007945_16 F28C11.4
            [Arabidopsis thaliana]
            gi|9295699|gb|AAF87005.1|AC005292_14 F26F24.27
            [Arabidopsis thaliana] gi|17065312|gb|AAL32810.1| Unknown
            protein [Arabidopsis thaliana] gi|21387129|gb|AAM47968.1|
            unknown protein [Arabidopsis thaliana]
            gi|332192262|gb|AEE30383.1| CRS2-associated factor 2
            [Arabidopsis thaliana]
          Length = 564

 Score =  612 bits (1579), Expect = e-172
 Identities = 292/415 (70%), Positives = 339/415 (81%), Gaps = 1/415 (0%)
 Frame = -3

Query: 1244 SQKSIIKQPPNESTTTTSPAFKSFHRRTKYYKPVSDGVISSEGDRSVIIGESGVSYSLPG 1065
            +QK+  +   N     ++PA K  H RT+YYKPV +GVISS+GDR+++IG+SGVSY LPG
Sbjct: 49   NQKTNHQTDTNPKKPQSNPALKLPHHRTRYYKPVKEGVISSDGDRTILIGDSGVSYQLPG 108

Query: 1064 APFEFQFSYSETPKVKPLAIREPAFLPFAPPTMPRPWTGKAPLKKSKKNIPLFDSFNPPP 885
            APFEFQFSYSETPKVKP+ IREPAF+PFAPPTMPRPWTGKAPLKKSKK IPLFDSFNPPP
Sbjct: 109  APFEFQFSYSETPKVKPVGIREPAFMPFAPPTMPRPWTGKAPLKKSKKKIPLFDSFNPPP 168

Query: 884  VGMKGVKQVEMPGPFPLGRFPKEGMTREEILGERLTKEEVRMLVKPHLSHNRQVNLGRDG 705
             G  GVK VEMPGP P GR+PKEGM REE+LGE L + E  ML+KPH+  NRQVNLGRDG
Sbjct: 169  AGKSGVKYVEMPGPLPFGRYPKEGMNREEVLGEPLKRWEKGMLIKPHMHDNRQVNLGRDG 228

Query: 704  LTHNMLELIHEHWKRQRICKVRCRGVPTVDMDNVCYHLEEKTGGKIIHRVGGVLYLFRGR 525
             THNMLELIH HWKR+R+CKVRC+GVPTVDM+NVC  LEEKTGG+IIHRVGGV+YLFRGR
Sbjct: 229  FTHNMLELIHSHWKRRRVCKVRCKGVPTVDMNNVCRVLEEKTGGEIIHRVGGVVYLFRGR 288

Query: 524  NYNYRTRPQYPVMLWKPATPVYPKLIQEAPEGLTKFEAADMIKKGKNLLPICKLAKNGIY 345
            NYNYRTRPQYP+MLWKPA PVYPKLIQE PEGLTK EA +   KGK+L PICKL+KNG+Y
Sbjct: 289  NYNYRTRPQYPLMLWKPAAPVYPKLIQEVPEGLTKEEAHEFRVKGKSLRPICKLSKNGVY 348

Query: 344  MNLVKDVRDAFEGSPLVKIDCRGMHASDYKKIGAKLKELVPCVLLSFDDEQILTWRGEEW 165
            ++LVKDVRDAFE S LVK+DC G+  SDYKKIGAKLKELVPCVLLSFDDEQIL WRG EW
Sbjct: 349  VSLVKDVRDAFELSSLVKVDCPGLEPSDYKKIGAKLKELVPCVLLSFDDEQILMWRGREW 408

Query: 164  KSMYPEAPPTVPVSNHSNDSASLNSGELHSANERLV-PELEISSPKFLSRWKRAI 3
            KS + +  P +P  + +N +  L+  +  S  + +  P   ISSPK +S W+RA+
Sbjct: 409  KSRFVD-NPLIPSLSETNTTNELDPSDKPSEEQTVANPSTTISSPKMISLWQRAL 462