BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver29_contig00030364
         (1421 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_010273663.1| PREDICTED: general transcription factor IIH ...   234   e-102
ref|XP_002284465.2| PREDICTED: general transcription factor IIH ...   233   2e-96
ref|XP_010273665.1| PREDICTED: general transcription factor IIH ...   213   3e-96
emb|CBI19033.3| unnamed protein product [Vitis vinifera]              233   1e-95
ref|XP_007019036.1| Basal transcription factor complex subunit-r...   220   1e-94
ref|XP_012445877.1| PREDICTED: general transcription factor IIH ...   217   1e-94
gb|KJB59110.1| hypothetical protein B456_009G245300 [Gossypium r...   217   1e-94
ref|XP_008219657.1| PREDICTED: general transcription factor IIH ...   217   7e-94
ref|XP_012078222.1| PREDICTED: general transcription factor IIH ...   221   3e-93
ref|XP_010999370.1| PREDICTED: general transcription factor IIH ...   220   1e-92
ref|XP_002307429.2| basal transcription factor complex subunit-r...   220   2e-92
ref|XP_009363173.1| PREDICTED: general transcription factor IIH ...   216   2e-92
gb|KDO80684.1| hypothetical protein CISIN_1g022374mg [Citrus sin...   214   3e-92
gb|KDO80685.1| hypothetical protein CISIN_1g022374mg [Citrus sin...   214   3e-92
ref|XP_006472762.1| PREDICTED: general transcription factor IIH ...   214   8e-92
ref|XP_012078217.1| PREDICTED: general transcription factor IIH ...   216   8e-92
ref|XP_006472763.1| PREDICTED: general transcription factor IIH ...   214   8e-92
ref|XP_007223251.1| hypothetical protein PRUPE_ppa009386mg [Prun...   210   1e-91
ref|XP_008391898.1| PREDICTED: general transcription factor IIH ...   216   7e-91
ref|XP_004290857.1| PREDICTED: general transcription factor IIH ...   215   2e-90

>ref|XP_010273663.1| PREDICTED: general transcription factor IIH subunit 3 isoform X1
           [Nelumbo nucifera]
          Length = 303

 Score =  234 bits (596), Expect(2) = e-102
 Identities = 109/128 (85%), Positives = 116/128 (90%)
 Frame = -2

Query: 664 FSAQRSMVPIDSCIVGVQHSAFLQQASYITGGVYLKPPQLDGLFQYLSTVFATDLHSRSF 485
           FSAQRSMVPID+C++G QHSAFLQQASYITGGVYLKPPQLDGLFQYLSTVF+TDL SRSF
Sbjct: 175 FSAQRSMVPIDACVIGAQHSAFLQQASYITGGVYLKPPQLDGLFQYLSTVFSTDLQSRSF 234

Query: 484 LQLPKPVGVDFRASCFCHKSTIDMGYICSVCLSIFCKQHKKCSTCGSVFGQANPEVKLPT 305
           LQLPKPVGVDFRASCFCHK TIDMGYICSVCLSIFCK HKKCSTCGSVFGQA+      +
Sbjct: 235 LQLPKPVGVDFRASCFCHKKTIDMGYICSVCLSIFCKHHKKCSTCGSVFGQAHSSATTTS 294

Query: 304 DRKRKAID 281
           DRKRK  +
Sbjct: 295 DRKRKTTE 302



 Score =  168 bits (426), Expect(2) = e-102
 Identities = 90/152 (59%), Positives = 103/152 (67%), Gaps = 1/152 (0%)
 Frame = -3

Query: 1167 MDSAPSKQYSDDVSLVMVLLDTNPFFWGGENTTTK-VSFSNFLIHVISFLNSXXXXXXXX 991
            M S  SK YSDDVSL++VLLDTNPF W GENTTT  +SF  FL HV SFLNS        
Sbjct: 1    MASITSKLYSDDVSLLVVLLDTNPFLWSGENTTTNSLSFPKFLTHVFSFLNSILLLNQLN 60

Query: 990  XXXVIATGYNSCDYIFDSSTSESLNVSSGNGKMPALCSKMLQKLEEFVIRDEQLSKENSP 811
               VIATG NSCDYI+DSS+S +   S  NG+MPALCSK+LQ LEEF+ RD++L+K+ SP
Sbjct: 61   QVVVIATGLNSCDYIYDSSSSPTTVESLENGRMPALCSKLLQNLEEFLARDQELNKDESP 120

Query: 810  SGIVXXXXXXXXXXXLCYIQKVLRSGRLHPNP 715
             GI            LCYIQKV RSG LHP P
Sbjct: 121  PGIASSLLSGSLSLALCYIQKVFRSGPLHPQP 152


>ref|XP_002284465.2| PREDICTED: general transcription factor IIH subunit 3 [Vitis
           vinifera]
          Length = 303

 Score =  233 bits (595), Expect(2) = 2e-96
 Identities = 110/125 (88%), Positives = 114/125 (91%)
 Frame = -2

Query: 664 FSAQRSMVPIDSCIVGVQHSAFLQQASYITGGVYLKPPQLDGLFQYLSTVFATDLHSRSF 485
           FSAQRSMVPIDSC++G QHSAFLQQASYITGGVYLKP QLDGLFQYLSTVFATDLHSR F
Sbjct: 175 FSAQRSMVPIDSCVIGAQHSAFLQQASYITGGVYLKPQQLDGLFQYLSTVFATDLHSRRF 234

Query: 484 LQLPKPVGVDFRASCFCHKSTIDMGYICSVCLSIFCKQHKKCSTCGSVFGQANPEVKLPT 305
           LQLPKP GVDFRASCFCHK+TIDMGYICSVCLSIFCK HKKCSTCGSVFGQA  +    T
Sbjct: 235 LQLPKPAGVDFRASCFCHKNTIDMGYICSVCLSIFCKHHKKCSTCGSVFGQAQSDGNSAT 294

Query: 304 DRKRK 290
           DRKRK
Sbjct: 295 DRKRK 299



 Score =  149 bits (375), Expect(2) = 2e-96
 Identities = 85/157 (54%), Positives = 101/157 (64%)
 Frame = -3

Query: 1185 IGPVTVMDSAPSKQYSDDVSLVMVLLDTNPFFWGGENTTTKVSFSNFLIHVISFLNSXXX 1006
            +G   VM   PSK YSDDVSL++VLLDTNPFFW    +T  + FS FL HV++FLNS   
Sbjct: 1    MGRSAVMAPVPSKLYSDDVSLLVVLLDTNPFFW----STASLPFSKFLSHVLAFLNSILL 56

Query: 1005 XXXXXXXXVIATGYNSCDYIFDSSTSESLNVSSGNGKMPALCSKMLQKLEEFVIRDEQLS 826
                    VIATG NSC++IFDSS S   N +  NG+MPALCS +LQKLEEFV  DE+LS
Sbjct: 57   INQLNQVVVIATGCNSCNFIFDSS-SVPANPNLENGRMPALCSNLLQKLEEFVTGDEKLS 115

Query: 825  KENSPSGIVXXXXXXXXXXXLCYIQKVLRSGRLHPNP 715
            KE   +GI            LCYIQ+V R+G LHP P
Sbjct: 116  KEVLAAGIGSSLLSGSLSMALCYIQRVFRTGPLHPQP 152


>ref|XP_010273665.1| PREDICTED: general transcription factor IIH subunit 3 isoform X3
           [Nelumbo nucifera]
          Length = 284

 Score =  213 bits (542), Expect(2) = 3e-96
 Identities = 98/106 (92%), Positives = 102/106 (96%)
 Frame = -2

Query: 664 FSAQRSMVPIDSCIVGVQHSAFLQQASYITGGVYLKPPQLDGLFQYLSTVFATDLHSRSF 485
           FSAQRSMVPID+C++G QHSAFLQQASYITGGVYLKPPQLDGLFQYLSTVF+TDL SRSF
Sbjct: 175 FSAQRSMVPIDACVIGAQHSAFLQQASYITGGVYLKPPQLDGLFQYLSTVFSTDLQSRSF 234

Query: 484 LQLPKPVGVDFRASCFCHKSTIDMGYICSVCLSIFCKQHKKCSTCG 347
           LQLPKPVGVDFRASCFCHK TIDMGYICSVCLSIFCK HKKCSTCG
Sbjct: 235 LQLPKPVGVDFRASCFCHKKTIDMGYICSVCLSIFCKHHKKCSTCG 280



 Score =  168 bits (426), Expect(2) = 3e-96
 Identities = 90/152 (59%), Positives = 103/152 (67%), Gaps = 1/152 (0%)
 Frame = -3

Query: 1167 MDSAPSKQYSDDVSLVMVLLDTNPFFWGGENTTTK-VSFSNFLIHVISFLNSXXXXXXXX 991
            M S  SK YSDDVSL++VLLDTNPF W GENTTT  +SF  FL HV SFLNS        
Sbjct: 1    MASITSKLYSDDVSLLVVLLDTNPFLWSGENTTTNSLSFPKFLTHVFSFLNSILLLNQLN 60

Query: 990  XXXVIATGYNSCDYIFDSSTSESLNVSSGNGKMPALCSKMLQKLEEFVIRDEQLSKENSP 811
               VIATG NSCDYI+DSS+S +   S  NG+MPALCSK+LQ LEEF+ RD++L+K+ SP
Sbjct: 61   QVVVIATGLNSCDYIYDSSSSPTTVESLENGRMPALCSKLLQNLEEFLARDQELNKDESP 120

Query: 810  SGIVXXXXXXXXXXXLCYIQKVLRSGRLHPNP 715
             GI            LCYIQKV RSG LHP P
Sbjct: 121  PGIASSLLSGSLSLALCYIQKVFRSGPLHPQP 152


>emb|CBI19033.3| unnamed protein product [Vitis vinifera]
          Length = 297

 Score =  233 bits (595), Expect(2) = 1e-95
 Identities = 110/125 (88%), Positives = 114/125 (91%)
 Frame = -2

Query: 664 FSAQRSMVPIDSCIVGVQHSAFLQQASYITGGVYLKPPQLDGLFQYLSTVFATDLHSRSF 485
           FSAQRSMVPIDSC++G QHSAFLQQASYITGGVYLKP QLDGLFQYLSTVFATDLHSR F
Sbjct: 169 FSAQRSMVPIDSCVIGAQHSAFLQQASYITGGVYLKPQQLDGLFQYLSTVFATDLHSRRF 228

Query: 484 LQLPKPVGVDFRASCFCHKSTIDMGYICSVCLSIFCKQHKKCSTCGSVFGQANPEVKLPT 305
           LQLPKP GVDFRASCFCHK+TIDMGYICSVCLSIFCK HKKCSTCGSVFGQA  +    T
Sbjct: 229 LQLPKPAGVDFRASCFCHKNTIDMGYICSVCLSIFCKHHKKCSTCGSVFGQAQSDGNSAT 288

Query: 304 DRKRK 290
           DRKRK
Sbjct: 289 DRKRK 293



 Score =  146 bits (368), Expect(2) = 1e-95
 Identities = 83/151 (54%), Positives = 98/151 (64%)
 Frame = -3

Query: 1167 MDSAPSKQYSDDVSLVMVLLDTNPFFWGGENTTTKVSFSNFLIHVISFLNSXXXXXXXXX 988
            M   PSK YSDDVSL++VLLDTNPFFW    +T  + FS FL HV++FLNS         
Sbjct: 1    MAPVPSKLYSDDVSLLVVLLDTNPFFW----STASLPFSKFLSHVLAFLNSILLINQLNQ 56

Query: 987  XXVIATGYNSCDYIFDSSTSESLNVSSGNGKMPALCSKMLQKLEEFVIRDEQLSKENSPS 808
              VIATG NSC++IFDSS S   N +  NG+MPALCS +LQKLEEFV  DE+LSKE   +
Sbjct: 57   VVVIATGCNSCNFIFDSS-SVPANPNLENGRMPALCSNLLQKLEEFVTGDEKLSKEVLAA 115

Query: 807  GIVXXXXXXXXXXXLCYIQKVLRSGRLHPNP 715
            GI            LCYIQ+V R+G LHP P
Sbjct: 116  GIGSSLLSGSLSMALCYIQRVFRTGPLHPQP 146


>ref|XP_007019036.1| Basal transcription factor complex subunit-related isoform 1
           [Theobroma cacao] gi|508724364|gb|EOY16261.1| Basal
           transcription factor complex subunit-related isoform 1
           [Theobroma cacao]
          Length = 296

 Score =  220 bits (561), Expect(2) = 1e-94
 Identities = 104/125 (83%), Positives = 111/125 (88%)
 Frame = -2

Query: 664 FSAQRSMVPIDSCIVGVQHSAFLQQASYITGGVYLKPPQLDGLFQYLSTVFATDLHSRSF 485
           FSAQRSMVPIDSC +G Q+SAFLQQASYITGGV+ KP  LDGLFQYL T+FATDLHSRSF
Sbjct: 168 FSAQRSMVPIDSCYMGAQNSAFLQQASYITGGVHHKPQHLDGLFQYLMTIFATDLHSRSF 227

Query: 484 LQLPKPVGVDFRASCFCHKSTIDMGYICSVCLSIFCKQHKKCSTCGSVFGQANPEVKLPT 305
           L LPKPVGVDFRASCFCHK+TIDMGYICSVCLSIFCK HKKCSTCGSVFGQA  E    +
Sbjct: 228 LHLPKPVGVDFRASCFCHKNTIDMGYICSVCLSIFCKHHKKCSTCGSVFGQAQSEAASTS 287

Query: 304 DRKRK 290
           D+KRK
Sbjct: 288 DKKRK 292



 Score =  156 bits (394), Expect(2) = 1e-94
 Identities = 85/151 (56%), Positives = 103/151 (68%)
 Frame = -3

Query: 1167 MDSAPSKQYSDDVSLVMVLLDTNPFFWGGENTTTKVSFSNFLIHVISFLNSXXXXXXXXX 988
            M SAPSK Y+DDVSLV+VL+DTNPFFW    + + +SFS FL HV++FLN+         
Sbjct: 1    MASAPSKLYADDVSLVVVLVDTNPFFW----SASSLSFSQFLSHVLAFLNAILTLNQLNQ 56

Query: 987  XXVIATGYNSCDYIFDSSTSESLNVSSGNGKMPALCSKMLQKLEEFVIRDEQLSKENSPS 808
              VIATGYNSC+YIFDSS+   LN S  NG+MP +CS +LQKLEEF+I+DEQLSKE    
Sbjct: 57   VVVIATGYNSCNYIFDSSSD--LNQSFENGRMPVMCSSLLQKLEEFLIKDEQLSKEVPEG 114

Query: 807  GIVXXXXXXXXXXXLCYIQKVLRSGRLHPNP 715
             I            LCYIQ+V RSG LHP+P
Sbjct: 115  RIKSSLLSGSLSMALCYIQRVFRSGALHPHP 145


>ref|XP_012445877.1| PREDICTED: general transcription factor IIH subunit 3 [Gossypium
           raimondii] gi|823226126|ref|XP_012445878.1| PREDICTED:
           general transcription factor IIH subunit 3 [Gossypium
           raimondii] gi|763792108|gb|KJB59104.1| hypothetical
           protein B456_009G245300 [Gossypium raimondii]
           gi|763792109|gb|KJB59105.1| hypothetical protein
           B456_009G245300 [Gossypium raimondii]
          Length = 296

 Score =  217 bits (553), Expect(2) = 1e-94
 Identities = 102/125 (81%), Positives = 110/125 (88%)
 Frame = -2

Query: 664 FSAQRSMVPIDSCIVGVQHSAFLQQASYITGGVYLKPPQLDGLFQYLSTVFATDLHSRSF 485
           FSAQRS VPIDSC +G Q+SAFLQQASYITGGV+ KP  LDGLFQYL T+FATDLHSRSF
Sbjct: 168 FSAQRSSVPIDSCYIGSQNSAFLQQASYITGGVHHKPQNLDGLFQYLMTIFATDLHSRSF 227

Query: 484 LQLPKPVGVDFRASCFCHKSTIDMGYICSVCLSIFCKQHKKCSTCGSVFGQANPEVKLPT 305
           + LPKPVGVDFRASCFCHK+TIDMGYICSVCLSIFCK HKKCSTCGSVFGQA  E    +
Sbjct: 228 IHLPKPVGVDFRASCFCHKNTIDMGYICSVCLSIFCKHHKKCSTCGSVFGQAQSEAASAS 287

Query: 304 DRKRK 290
           D+KRK
Sbjct: 288 DKKRK 292



 Score =  159 bits (401), Expect(2) = 1e-94
 Identities = 86/151 (56%), Positives = 103/151 (68%)
 Frame = -3

Query: 1167 MDSAPSKQYSDDVSLVMVLLDTNPFFWGGENTTTKVSFSNFLIHVISFLNSXXXXXXXXX 988
            M SAPSK Y+DDVSLV+VLLDTNPFFW    +++ +SFS FL HV++FLN+         
Sbjct: 1    MASAPSKLYADDVSLVVVLLDTNPFFW----SSSSLSFSQFLSHVLAFLNAILTLNQLNQ 56

Query: 987  XXVIATGYNSCDYIFDSSTSESLNVSSGNGKMPALCSKMLQKLEEFVIRDEQLSKENSPS 808
              VIATGYNSCDY+FDSS+   LN S  NG+MP +CS +LQKLEEF+I DEQLSKE    
Sbjct: 57   VVVIATGYNSCDYVFDSSSD--LNRSFENGRMPVMCSSLLQKLEEFLITDEQLSKEEPEG 114

Query: 807  GIVXXXXXXXXXXXLCYIQKVLRSGRLHPNP 715
             I            LCYIQ+V RSG LHP+P
Sbjct: 115  KIKPSLFSGSLSMALCYIQRVFRSGALHPHP 145


>gb|KJB59110.1| hypothetical protein B456_009G245300 [Gossypium raimondii]
          Length = 291

 Score =  217 bits (553), Expect(2) = 1e-94
 Identities = 102/125 (81%), Positives = 110/125 (88%)
 Frame = -2

Query: 664 FSAQRSMVPIDSCIVGVQHSAFLQQASYITGGVYLKPPQLDGLFQYLSTVFATDLHSRSF 485
           FSAQRS VPIDSC +G Q+SAFLQQASYITGGV+ KP  LDGLFQYL T+FATDLHSRSF
Sbjct: 163 FSAQRSSVPIDSCYIGSQNSAFLQQASYITGGVHHKPQNLDGLFQYLMTIFATDLHSRSF 222

Query: 484 LQLPKPVGVDFRASCFCHKSTIDMGYICSVCLSIFCKQHKKCSTCGSVFGQANPEVKLPT 305
           + LPKPVGVDFRASCFCHK+TIDMGYICSVCLSIFCK HKKCSTCGSVFGQA  E    +
Sbjct: 223 IHLPKPVGVDFRASCFCHKNTIDMGYICSVCLSIFCKHHKKCSTCGSVFGQAQSEAASAS 282

Query: 304 DRKRK 290
           D+KRK
Sbjct: 283 DKKRK 287



 Score =  159 bits (401), Expect(2) = 1e-94
 Identities = 86/151 (56%), Positives = 103/151 (68%)
 Frame = -3

Query: 1167 MDSAPSKQYSDDVSLVMVLLDTNPFFWGGENTTTKVSFSNFLIHVISFLNSXXXXXXXXX 988
            M SAPSK Y+DDVSLV+VLLDTNPFFW    +++ +SFS FL HV++FLN+         
Sbjct: 1    MASAPSKLYADDVSLVVVLLDTNPFFW----SSSSLSFSQFLSHVLAFLNAILTLNQLNQ 56

Query: 987  XXVIATGYNSCDYIFDSSTSESLNVSSGNGKMPALCSKMLQKLEEFVIRDEQLSKENSPS 808
              VIATGYNSCDY+FDSS+   LN S  NG+MP +CS +LQKLEEF+I DEQLSKE    
Sbjct: 57   VVVIATGYNSCDYVFDSSSD--LNRSFENGRMPVMCSSLLQKLEEFLITDEQLSKEEPEG 114

Query: 807  GIVXXXXXXXXXXXLCYIQKVLRSGRLHPNP 715
             I            LCYIQ+V RSG LHP+P
Sbjct: 115  KIKPSLFSGSLSMALCYIQRVFRSGALHPHP 145


>ref|XP_008219657.1| PREDICTED: general transcription factor IIH subunit 3 [Prunus mume]
          Length = 296

 Score =  217 bits (552), Expect(2) = 7e-94
 Identities = 103/125 (82%), Positives = 112/125 (89%)
 Frame = -2

Query: 664 FSAQRSMVPIDSCIVGVQHSAFLQQASYITGGVYLKPPQLDGLFQYLSTVFATDLHSRSF 485
           FSAQRSMVPIDSC +G  +SAFLQQASYITGGVYLKP Q +GLFQYLSTVFATDLHSR+F
Sbjct: 168 FSAQRSMVPIDSCYMGSSNSAFLQQASYITGGVYLKPQQPNGLFQYLSTVFATDLHSRAF 227

Query: 484 LQLPKPVGVDFRASCFCHKSTIDMGYICSVCLSIFCKQHKKCSTCGSVFGQANPEVKLPT 305
           LQLPK +GVDFRASCFCHK TIDMGYICSVCLSIFCK HKKCSTCGSVFGQA  +V   +
Sbjct: 228 LQLPKSLGVDFRASCFCHKKTIDMGYICSVCLSIFCKHHKKCSTCGSVFGQAQSDVNSTS 287

Query: 304 DRKRK 290
           ++KRK
Sbjct: 288 NKKRK 292



 Score =  157 bits (396), Expect(2) = 7e-94
 Identities = 87/151 (57%), Positives = 100/151 (66%)
 Frame = -3

Query: 1167 MDSAPSKQYSDDVSLVMVLLDTNPFFWGGENTTTKVSFSNFLIHVISFLNSXXXXXXXXX 988
            M SAPSK Y+DDVSL+MVLLDTNPFFW    +++ + FS FL HV++FLNS         
Sbjct: 1    MASAPSKLYADDVSLLMVLLDTNPFFW----SSSSLPFSVFLSHVLTFLNSILLLNQLNQ 56

Query: 987  XXVIATGYNSCDYIFDSSTSESLNVSSGNGKMPALCSKMLQKLEEFVIRDEQLSKENSPS 808
              VIATGYNSC YI+DSSTS   N  S NG+MPA C  +LQKLEEFVI+DEQL KE    
Sbjct: 57   VVVIATGYNSCSYIYDSSTST--NQGSDNGRMPARCVNLLQKLEEFVIKDEQLIKEGLRE 114

Query: 807  GIVXXXXXXXXXXXLCYIQKVLRSGRLHPNP 715
            GI            LCYIQ+V RSG LHP P
Sbjct: 115  GIASSLLSGSLSMALCYIQRVFRSGPLHPQP 145


>ref|XP_012078222.1| PREDICTED: general transcription factor IIH subunit 3 isoform X2
           [Jatropha curcas] gi|643723184|gb|KDP32789.1|
           hypothetical protein JCGZ_12081 [Jatropha curcas]
          Length = 296

 Score =  221 bits (563), Expect(2) = 3e-93
 Identities = 105/126 (83%), Positives = 112/126 (88%)
 Frame = -2

Query: 664 FSAQRSMVPIDSCIVGVQHSAFLQQASYITGGVYLKPPQLDGLFQYLSTVFATDLHSRSF 485
           FSAQRSMVPIDSC VG  +SAFLQQASYITGGVY+KP  LDGLFQYL TVFATDLH RSF
Sbjct: 168 FSAQRSMVPIDSCYVGSHNSAFLQQASYITGGVYVKPQHLDGLFQYLVTVFATDLHCRSF 227

Query: 484 LQLPKPVGVDFRASCFCHKSTIDMGYICSVCLSIFCKQHKKCSTCGSVFGQANPEVKLPT 305
           LQLP+P GVDFRASCFCHK+TIDMGYICSVCLSIFCKQHKKCSTCGSVFGQ+  +    +
Sbjct: 228 LQLPRPAGVDFRASCFCHKTTIDMGYICSVCLSIFCKQHKKCSTCGSVFGQSQSDNSSAS 287

Query: 304 DRKRKA 287
           DRKRKA
Sbjct: 288 DRKRKA 293



 Score =  150 bits (379), Expect(2) = 3e-93
 Identities = 84/151 (55%), Positives = 100/151 (66%)
 Frame = -3

Query: 1167 MDSAPSKQYSDDVSLVMVLLDTNPFFWGGENTTTKVSFSNFLIHVISFLNSXXXXXXXXX 988
            M S PSK YSDDVSLVMVLLDTNPFFW    TT+ + FS FL HV++FLNS         
Sbjct: 1    MASVPSKLYSDDVSLVMVLLDTNPFFW----TTSSLLFSQFLSHVLAFLNSILLLNQLNQ 56

Query: 987  XXVIATGYNSCDYIFDSSTSESLNVSSGNGKMPALCSKMLQKLEEFVIRDEQLSKENSPS 808
              VIATGYNSC+Y++DSS +   N SS +G+MPAL S +LQ LEEF+I+DE+L KE S  
Sbjct: 57   VVVIATGYNSCNYVYDSSLAA--NQSSEDGRMPALYSNLLQALEEFMIKDEKLGKEESQG 114

Query: 807  GIVXXXXXXXXXXXLCYIQKVLRSGRLHPNP 715
             I            LCYIQ+V RSG L+P P
Sbjct: 115  KIASSLLSGSLSMALCYIQRVFRSGPLNPQP 145


>ref|XP_010999370.1| PREDICTED: general transcription factor IIH subunit 3 isoform X2
           [Populus euphratica] gi|743911031|ref|XP_010999371.1|
           PREDICTED: general transcription factor IIH subunit 3
           isoform X2 [Populus euphratica]
          Length = 298

 Score =  220 bits (560), Expect(2) = 1e-92
 Identities = 103/126 (81%), Positives = 111/126 (88%)
 Frame = -2

Query: 664 FSAQRSMVPIDSCIVGVQHSAFLQQASYITGGVYLKPPQLDGLFQYLSTVFATDLHSRSF 485
           FSAQRSMVPIDSC VG  +SAFLQQASYITGGVY+KP  LDGLFQYL+TVFATDLHSRSF
Sbjct: 170 FSAQRSMVPIDSCYVGAHNSAFLQQASYITGGVYVKPQHLDGLFQYLTTVFATDLHSRSF 229

Query: 484 LQLPKPVGVDFRASCFCHKSTIDMGYICSVCLSIFCKQHKKCSTCGSVFGQANPEVKLPT 305
           +QLP+P GVDFRASCFCHK+TIDMGYICSVCLSIFC  HKKCSTCGSVFGQA  +    +
Sbjct: 230 IQLPRPAGVDFRASCFCHKTTIDMGYICSVCLSIFCNHHKKCSTCGSVFGQAQSDTSSTS 289

Query: 304 DRKRKA 287
           D KRKA
Sbjct: 290 DLKRKA 295



 Score =  149 bits (377), Expect(2) = 1e-92
 Identities = 80/151 (52%), Positives = 102/151 (67%)
 Frame = -3

Query: 1167 MDSAPSKQYSDDVSLVMVLLDTNPFFWGGENTTTKVSFSNFLIHVISFLNSXXXXXXXXX 988
            M S PSK YSDDVSL++VLLDTNPFFW     ++ +SFS FL HV++F+NS         
Sbjct: 1    MTSVPSKLYSDDVSLLVVLLDTNPFFW---TASSSLSFSQFLSHVLAFVNSILLLNQLNQ 57

Query: 987  XXVIATGYNSCDYIFDSSTSESLNVSSGNGKMPALCSKMLQKLEEFVIRDEQLSKENSPS 808
              VIA+GYN+CDYI+DSS S++  + S NG++P+L S +LQKLEEF+I+DE+L KE S  
Sbjct: 58   VVVIASGYNTCDYIYDSS-SDASQLGSENGRIPSLYSNLLQKLEEFMIKDEKLGKEQSQR 116

Query: 807  GIVXXXXXXXXXXXLCYIQKVLRSGRLHPNP 715
             I            LCYIQ+V RSG LHP P
Sbjct: 117  AIKSSLLSGSLSMALCYIQRVFRSGPLHPQP 147


>ref|XP_002307429.2| basal transcription factor complex subunit-related family protein
           [Populus trichocarpa] gi|550339079|gb|EEE94425.2| basal
           transcription factor complex subunit-related family
           protein [Populus trichocarpa]
          Length = 298

 Score =  220 bits (560), Expect(2) = 2e-92
 Identities = 103/126 (81%), Positives = 111/126 (88%)
 Frame = -2

Query: 664 FSAQRSMVPIDSCIVGVQHSAFLQQASYITGGVYLKPPQLDGLFQYLSTVFATDLHSRSF 485
           FSAQRSMVPIDSC VG  +SAFLQQASYITGGVY+KP  LDGLFQYL+TVFATDLHSRSF
Sbjct: 170 FSAQRSMVPIDSCYVGAHNSAFLQQASYITGGVYVKPQHLDGLFQYLTTVFATDLHSRSF 229

Query: 484 LQLPKPVGVDFRASCFCHKSTIDMGYICSVCLSIFCKQHKKCSTCGSVFGQANPEVKLPT 305
           +QLP+P GVDFRASCFCHK+TIDMGYICSVCLSIFC  HKKCSTCGSVFGQA  +    +
Sbjct: 230 IQLPRPAGVDFRASCFCHKTTIDMGYICSVCLSIFCNHHKKCSTCGSVFGQAQSDTSSTS 289

Query: 304 DRKRKA 287
           D KRKA
Sbjct: 290 DLKRKA 295



 Score =  149 bits (376), Expect(2) = 2e-92
 Identities = 81/151 (53%), Positives = 101/151 (66%)
 Frame = -3

Query: 1167 MDSAPSKQYSDDVSLVMVLLDTNPFFWGGENTTTKVSFSNFLIHVISFLNSXXXXXXXXX 988
            M S PSK YSDDVSLV+VLLDTNPFFW      + +SFS FL HV++F+NS         
Sbjct: 1    MTSVPSKLYSDDVSLVVVLLDTNPFFW---TPPSSLSFSQFLSHVLAFVNSILLLNQLNQ 57

Query: 987  XXVIATGYNSCDYIFDSSTSESLNVSSGNGKMPALCSKMLQKLEEFVIRDEQLSKENSPS 808
              VIA+GYN+CDYI+DSS S++  + S +G+MP+L S +LQKLEEF+I+DE+L KE S  
Sbjct: 58   VVVIASGYNTCDYIYDSS-SDASQLGSEDGRMPSLYSNLLQKLEEFMIKDEKLGKEQSQR 116

Query: 807  GIVXXXXXXXXXXXLCYIQKVLRSGRLHPNP 715
             I            LCYIQ+V RSG LHP P
Sbjct: 117  AIKSSLLSGSLSMALCYIQRVFRSGPLHPQP 147


>ref|XP_009363173.1| PREDICTED: general transcription factor IIH subunit 3 [Pyrus x
           bretschneideri] gi|694371047|ref|XP_009363174.1|
           PREDICTED: general transcription factor IIH subunit 3
           [Pyrus x bretschneideri]
           gi|694371051|ref|XP_009363175.1| PREDICTED: general
           transcription factor IIH subunit 3 [Pyrus x
           bretschneideri]
          Length = 297

 Score =  216 bits (549), Expect(2) = 2e-92
 Identities = 103/125 (82%), Positives = 111/125 (88%)
 Frame = -2

Query: 664 FSAQRSMVPIDSCIVGVQHSAFLQQASYITGGVYLKPPQLDGLFQYLSTVFATDLHSRSF 485
           FSAQRSMVPIDSC +G  +SAFLQQASYITGGVYLKP Q +GLFQYLSTVFATDLHSR+F
Sbjct: 169 FSAQRSMVPIDSCYMGSSNSAFLQQASYITGGVYLKPQQPNGLFQYLSTVFATDLHSRAF 228

Query: 484 LQLPKPVGVDFRASCFCHKSTIDMGYICSVCLSIFCKQHKKCSTCGSVFGQANPEVKLPT 305
           LQLPK +GVDFRASCFCHK TIDMGYICSVCLSIFCK HKKCSTCGSVFGQA  +    +
Sbjct: 229 LQLPKSLGVDFRASCFCHKKTIDMGYICSVCLSIFCKHHKKCSTCGSVFGQAQLDASSTS 288

Query: 304 DRKRK 290
           +RKRK
Sbjct: 289 NRKRK 293



 Score =  153 bits (387), Expect(2) = 2e-92
 Identities = 87/152 (57%), Positives = 99/152 (65%), Gaps = 1/152 (0%)
 Frame = -3

Query: 1167 MDSAPSKQYSDDVSLVMVLLDTNPFFWGGENTTTKVSFSNFLIHVISFLNSXXXXXXXXX 988
            M SAPSK Y+DDVSL+MVLLDTNPFFW   N    + FS FL HV++FLNS         
Sbjct: 1    MASAPSKLYADDVSLLMVLLDTNPFFWSSSN----LPFSKFLPHVLTFLNSILLLNQLNQ 56

Query: 987  XXVIATGYNSCDYIFDSSTSESLNVSSGNGK-MPALCSKMLQKLEEFVIRDEQLSKENSP 811
              VIATGYNSC YI+DSS+    N  S +G+ MPA CS +LQKLEEFVI+DEQL KE S 
Sbjct: 57   VVVIATGYNSCSYIYDSSSDS--NQGSDHGRIMPARCSNLLQKLEEFVIKDEQLFKEGSR 114

Query: 810  SGIVXXXXXXXXXXXLCYIQKVLRSGRLHPNP 715
             GI            LCYIQ+V RSG LHP P
Sbjct: 115  EGISSSLLSGSLSMALCYIQRVFRSGPLHPQP 146


>gb|KDO80684.1| hypothetical protein CISIN_1g022374mg [Citrus sinensis]
          Length = 298

 Score =  214 bits (545), Expect(2) = 3e-92
 Identities = 104/130 (80%), Positives = 113/130 (86%), Gaps = 2/130 (1%)
 Frame = -2

Query: 664 FSAQRSMVPIDSCIVGVQHSAFLQQASYITGGVYLKPPQLDGLFQYLSTVFATDLHSRSF 485
           FSAQRSMVPIDSC +G Q+SAFLQQASYITGGV+ KP QLDGLFQYL T+F TDLHSR+F
Sbjct: 168 FSAQRSMVPIDSCYLGAQNSAFLQQASYITGGVHHKPQQLDGLFQYLLTIFGTDLHSRNF 227

Query: 484 LQLPKPVGVDFRASCFCHKSTIDMGYICSVCLSIFCKQHKKCSTCGSVFGQANPEVKLP- 308
           LQLPKPVGVDFRASCFCHK+TIDMGYICSVCLSI+CK  KKCSTCGSVFGQA  +   P 
Sbjct: 228 LQLPKPVGVDFRASCFCHKNTIDMGYICSVCLSIYCKHLKKCSTCGSVFGQAQTQSDEPS 287

Query: 307 -TDRKRKAID 281
            T+RKRK  D
Sbjct: 288 ATNRKRKTTD 297



 Score =  154 bits (389), Expect(2) = 3e-92
 Identities = 82/151 (54%), Positives = 102/151 (67%)
 Frame = -3

Query: 1167 MDSAPSKQYSDDVSLVMVLLDTNPFFWGGENTTTKVSFSNFLIHVISFLNSXXXXXXXXX 988
            M SAPSK YSDDVSLV+VLLDTNPFFW    +++ +SFS FL HV++FLN+         
Sbjct: 1    MASAPSKLYSDDVSLVVVLLDTNPFFW----SSSSLSFSQFLTHVLAFLNAILTLNQLNQ 56

Query: 987  XXVIATGYNSCDYIFDSSTSESLNVSSGNGKMPALCSKMLQKLEEFVIRDEQLSKENSPS 808
              VIATGYNSCDY++DSS++   N S GNG+MP+LC+ +LQ LEEF+ +DEQL K+    
Sbjct: 57   VVVIATGYNSCDYVYDSSSTG--NQSVGNGRMPSLCATLLQNLEEFMNKDEQLGKQEPEG 114

Query: 807  GIVXXXXXXXXXXXLCYIQKVLRSGRLHPNP 715
             I            LCYIQ+V RSG LHP P
Sbjct: 115  RIACSLLSGSLSMALCYIQRVFRSGLLHPQP 145


>gb|KDO80685.1| hypothetical protein CISIN_1g022374mg [Citrus sinensis]
          Length = 293

 Score =  214 bits (545), Expect(2) = 3e-92
 Identities = 104/130 (80%), Positives = 113/130 (86%), Gaps = 2/130 (1%)
 Frame = -2

Query: 664 FSAQRSMVPIDSCIVGVQHSAFLQQASYITGGVYLKPPQLDGLFQYLSTVFATDLHSRSF 485
           FSAQRSMVPIDSC +G Q+SAFLQQASYITGGV+ KP QLDGLFQYL T+F TDLHSR+F
Sbjct: 163 FSAQRSMVPIDSCYLGAQNSAFLQQASYITGGVHHKPQQLDGLFQYLLTIFGTDLHSRNF 222

Query: 484 LQLPKPVGVDFRASCFCHKSTIDMGYICSVCLSIFCKQHKKCSTCGSVFGQANPEVKLP- 308
           LQLPKPVGVDFRASCFCHK+TIDMGYICSVCLSI+CK  KKCSTCGSVFGQA  +   P 
Sbjct: 223 LQLPKPVGVDFRASCFCHKNTIDMGYICSVCLSIYCKHLKKCSTCGSVFGQAQTQSDEPS 282

Query: 307 -TDRKRKAID 281
            T+RKRK  D
Sbjct: 283 ATNRKRKTTD 292



 Score =  154 bits (389), Expect(2) = 3e-92
 Identities = 82/151 (54%), Positives = 102/151 (67%)
 Frame = -3

Query: 1167 MDSAPSKQYSDDVSLVMVLLDTNPFFWGGENTTTKVSFSNFLIHVISFLNSXXXXXXXXX 988
            M SAPSK YSDDVSLV+VLLDTNPFFW    +++ +SFS FL HV++FLN+         
Sbjct: 1    MASAPSKLYSDDVSLVVVLLDTNPFFW----SSSSLSFSQFLTHVLAFLNAILTLNQLNQ 56

Query: 987  XXVIATGYNSCDYIFDSSTSESLNVSSGNGKMPALCSKMLQKLEEFVIRDEQLSKENSPS 808
              VIATGYNSCDY++DSS++   N S GNG+MP+LC+ +LQ LEEF+ +DEQL K+    
Sbjct: 57   VVVIATGYNSCDYVYDSSSTG--NQSVGNGRMPSLCATLLQNLEEFMNKDEQLGKQEPEG 114

Query: 807  GIVXXXXXXXXXXXLCYIQKVLRSGRLHPNP 715
             I            LCYIQ+V RSG LHP P
Sbjct: 115  RIACSLLSGSLSMALCYIQRVFRSGLLHPQP 145


>ref|XP_006472762.1| PREDICTED: general transcription factor IIH subunit 3-like isoform
           X1 [Citrus sinensis]
          Length = 298

 Score =  214 bits (545), Expect(2) = 8e-92
 Identities = 104/130 (80%), Positives = 113/130 (86%), Gaps = 2/130 (1%)
 Frame = -2

Query: 664 FSAQRSMVPIDSCIVGVQHSAFLQQASYITGGVYLKPPQLDGLFQYLSTVFATDLHSRSF 485
           FSAQRSMVPIDSC +G Q+SAFLQQASYITGGV+ KP QLDGLFQYL T+F TDLHSR+F
Sbjct: 168 FSAQRSMVPIDSCYLGAQNSAFLQQASYITGGVHHKPQQLDGLFQYLLTIFGTDLHSRNF 227

Query: 484 LQLPKPVGVDFRASCFCHKSTIDMGYICSVCLSIFCKQHKKCSTCGSVFGQANPEVKLP- 308
           LQLPKPVGVDFRASCFCHK+TIDMGYICSVCLSI+CK  KKCSTCGSVFGQA  +   P 
Sbjct: 228 LQLPKPVGVDFRASCFCHKNTIDMGYICSVCLSIYCKHLKKCSTCGSVFGQAQTQSDEPS 287

Query: 307 -TDRKRKAID 281
            T+RKRK  D
Sbjct: 288 ATNRKRKTTD 297



 Score =  152 bits (385), Expect(2) = 8e-92
 Identities = 81/151 (53%), Positives = 101/151 (66%)
 Frame = -3

Query: 1167 MDSAPSKQYSDDVSLVMVLLDTNPFFWGGENTTTKVSFSNFLIHVISFLNSXXXXXXXXX 988
            M SAPSK YSDDVSLV+VLLDTNPFFW    +++ +SFS FL HV++F N+         
Sbjct: 1    MASAPSKLYSDDVSLVVVLLDTNPFFW----SSSSLSFSQFLTHVLAFFNAILTLNQLNQ 56

Query: 987  XXVIATGYNSCDYIFDSSTSESLNVSSGNGKMPALCSKMLQKLEEFVIRDEQLSKENSPS 808
              VIATGYNSCDY++DSS++   N S GNG+MP+LC+ +LQ LEEF+ +DEQL K+    
Sbjct: 57   VVVIATGYNSCDYVYDSSSTG--NQSVGNGRMPSLCATLLQNLEEFMNKDEQLGKQEPEG 114

Query: 807  GIVXXXXXXXXXXXLCYIQKVLRSGRLHPNP 715
             I            LCYIQ+V RSG LHP P
Sbjct: 115  RIACSLLSGSLSMALCYIQRVFRSGLLHPQP 145


>ref|XP_012078217.1| PREDICTED: general transcription factor IIH subunit 3 isoform X1
           [Jatropha curcas] gi|802635559|ref|XP_012078218.1|
           PREDICTED: general transcription factor IIH subunit 3
           isoform X1 [Jatropha curcas]
           gi|802635562|ref|XP_012078219.1| PREDICTED: general
           transcription factor IIH subunit 3 isoform X1 [Jatropha
           curcas] gi|802635602|ref|XP_012078220.1| PREDICTED:
           general transcription factor IIH subunit 3 isoform X1
           [Jatropha curcas]
          Length = 297

 Score =  216 bits (551), Expect(2) = 8e-92
 Identities = 105/127 (82%), Positives = 112/127 (88%), Gaps = 1/127 (0%)
 Frame = -2

Query: 664 FSAQRSMVPIDSCIVGVQHSAFLQQ-ASYITGGVYLKPPQLDGLFQYLSTVFATDLHSRS 488
           FSAQRSMVPIDSC VG  +SAFLQQ ASYITGGVY+KP  LDGLFQYL TVFATDLH RS
Sbjct: 168 FSAQRSMVPIDSCYVGSHNSAFLQQQASYITGGVYVKPQHLDGLFQYLVTVFATDLHCRS 227

Query: 487 FLQLPKPVGVDFRASCFCHKSTIDMGYICSVCLSIFCKQHKKCSTCGSVFGQANPEVKLP 308
           FLQLP+P GVDFRASCFCHK+TIDMGYICSVCLSIFCKQHKKCSTCGSVFGQ+  +    
Sbjct: 228 FLQLPRPAGVDFRASCFCHKTTIDMGYICSVCLSIFCKQHKKCSTCGSVFGQSQSDNSSA 287

Query: 307 TDRKRKA 287
           +DRKRKA
Sbjct: 288 SDRKRKA 294



 Score =  150 bits (379), Expect(2) = 8e-92
 Identities = 84/151 (55%), Positives = 100/151 (66%)
 Frame = -3

Query: 1167 MDSAPSKQYSDDVSLVMVLLDTNPFFWGGENTTTKVSFSNFLIHVISFLNSXXXXXXXXX 988
            M S PSK YSDDVSLVMVLLDTNPFFW    TT+ + FS FL HV++FLNS         
Sbjct: 1    MASVPSKLYSDDVSLVMVLLDTNPFFW----TTSSLLFSQFLSHVLAFLNSILLLNQLNQ 56

Query: 987  XXVIATGYNSCDYIFDSSTSESLNVSSGNGKMPALCSKMLQKLEEFVIRDEQLSKENSPS 808
              VIATGYNSC+Y++DSS +   N SS +G+MPAL S +LQ LEEF+I+DE+L KE S  
Sbjct: 57   VVVIATGYNSCNYVYDSSLAA--NQSSEDGRMPALYSNLLQALEEFMIKDEKLGKEESQG 114

Query: 807  GIVXXXXXXXXXXXLCYIQKVLRSGRLHPNP 715
             I            LCYIQ+V RSG L+P P
Sbjct: 115  KIASSLLSGSLSMALCYIQRVFRSGPLNPQP 145


>ref|XP_006472763.1| PREDICTED: general transcription factor IIH subunit 3-like isoform
           X2 [Citrus sinensis]
          Length = 293

 Score =  214 bits (545), Expect(2) = 8e-92
 Identities = 104/130 (80%), Positives = 113/130 (86%), Gaps = 2/130 (1%)
 Frame = -2

Query: 664 FSAQRSMVPIDSCIVGVQHSAFLQQASYITGGVYLKPPQLDGLFQYLSTVFATDLHSRSF 485
           FSAQRSMVPIDSC +G Q+SAFLQQASYITGGV+ KP QLDGLFQYL T+F TDLHSR+F
Sbjct: 163 FSAQRSMVPIDSCYLGAQNSAFLQQASYITGGVHHKPQQLDGLFQYLLTIFGTDLHSRNF 222

Query: 484 LQLPKPVGVDFRASCFCHKSTIDMGYICSVCLSIFCKQHKKCSTCGSVFGQANPEVKLP- 308
           LQLPKPVGVDFRASCFCHK+TIDMGYICSVCLSI+CK  KKCSTCGSVFGQA  +   P 
Sbjct: 223 LQLPKPVGVDFRASCFCHKNTIDMGYICSVCLSIYCKHLKKCSTCGSVFGQAQTQSDEPS 282

Query: 307 -TDRKRKAID 281
            T+RKRK  D
Sbjct: 283 ATNRKRKTTD 292



 Score =  152 bits (385), Expect(2) = 8e-92
 Identities = 81/151 (53%), Positives = 101/151 (66%)
 Frame = -3

Query: 1167 MDSAPSKQYSDDVSLVMVLLDTNPFFWGGENTTTKVSFSNFLIHVISFLNSXXXXXXXXX 988
            M SAPSK YSDDVSLV+VLLDTNPFFW    +++ +SFS FL HV++F N+         
Sbjct: 1    MASAPSKLYSDDVSLVVVLLDTNPFFW----SSSSLSFSQFLTHVLAFFNAILTLNQLNQ 56

Query: 987  XXVIATGYNSCDYIFDSSTSESLNVSSGNGKMPALCSKMLQKLEEFVIRDEQLSKENSPS 808
              VIATGYNSCDY++DSS++   N S GNG+MP+LC+ +LQ LEEF+ +DEQL K+    
Sbjct: 57   VVVIATGYNSCDYVYDSSSTG--NQSVGNGRMPSLCATLLQNLEEFMNKDEQLGKQEPEG 114

Query: 807  GIVXXXXXXXXXXXLCYIQKVLRSGRLHPNP 715
             I            LCYIQ+V RSG LHP P
Sbjct: 115  RIACSLLSGSLSMALCYIQRVFRSGLLHPQP 145


>ref|XP_007223251.1| hypothetical protein PRUPE_ppa009386mg [Prunus persica]
           gi|462420187|gb|EMJ24450.1| hypothetical protein
           PRUPE_ppa009386mg [Prunus persica]
          Length = 295

 Score =  210 bits (535), Expect(2) = 1e-91
 Identities = 102/125 (81%), Positives = 111/125 (88%)
 Frame = -2

Query: 664 FSAQRSMVPIDSCIVGVQHSAFLQQASYITGGVYLKPPQLDGLFQYLSTVFATDLHSRSF 485
           FSAQRS VPIDSC +G  +SAFLQQASYITGGVYLKP Q +GLFQYLSTVFATDLHSR+F
Sbjct: 168 FSAQRS-VPIDSCYMGSSNSAFLQQASYITGGVYLKPQQPNGLFQYLSTVFATDLHSRAF 226

Query: 484 LQLPKPVGVDFRASCFCHKSTIDMGYICSVCLSIFCKQHKKCSTCGSVFGQANPEVKLPT 305
           LQLPK +GVDFRASCFCHK TIDMGYICSVCLSIFCK HKKCSTCGSVFGQA  +V   +
Sbjct: 227 LQLPKSLGVDFRASCFCHKKTIDMGYICSVCLSIFCKHHKKCSTCGSVFGQAQSDVNSTS 286

Query: 304 DRKRK 290
           ++KRK
Sbjct: 287 NKKRK 291



 Score =  156 bits (394), Expect(2) = 1e-91
 Identities = 87/151 (57%), Positives = 99/151 (65%)
 Frame = -3

Query: 1167 MDSAPSKQYSDDVSLVMVLLDTNPFFWGGENTTTKVSFSNFLIHVISFLNSXXXXXXXXX 988
            M SAPSK Y+DDVSL+MVLLDTNPFFW    +++ + FS FL HV++FLNS         
Sbjct: 1    MASAPSKLYADDVSLLMVLLDTNPFFW----SSSSLPFSVFLSHVLTFLNSILLLNQLNQ 56

Query: 987  XXVIATGYNSCDYIFDSSTSESLNVSSGNGKMPALCSKMLQKLEEFVIRDEQLSKENSPS 808
              VIATGYNSC YI+DSSTS   N  S NG+MPA C  +LQKLEEFVI DEQL KE    
Sbjct: 57   VVVIATGYNSCSYIYDSSTST--NQGSDNGRMPARCVNLLQKLEEFVIEDEQLIKEGLRE 114

Query: 807  GIVXXXXXXXXXXXLCYIQKVLRSGRLHPNP 715
            GI            LCYIQ+V RSG LHP P
Sbjct: 115  GIASSLLSGSLSMALCYIQRVFRSGPLHPQP 145


>ref|XP_008391898.1| PREDICTED: general transcription factor IIH subunit 3 [Malus
           domestica] gi|657998960|ref|XP_008391899.1| PREDICTED:
           general transcription factor IIH subunit 3 [Malus
           domestica]
          Length = 297

 Score =  216 bits (549), Expect(2) = 7e-91
 Identities = 103/125 (82%), Positives = 111/125 (88%)
 Frame = -2

Query: 664 FSAQRSMVPIDSCIVGVQHSAFLQQASYITGGVYLKPPQLDGLFQYLSTVFATDLHSRSF 485
           FSAQRSMVPIDSC +G  +SAFLQQASYITGGVYLKP Q +GLFQYLSTVFATDLHSR+F
Sbjct: 169 FSAQRSMVPIDSCYMGSSNSAFLQQASYITGGVYLKPQQPNGLFQYLSTVFATDLHSRAF 228

Query: 484 LQLPKPVGVDFRASCFCHKSTIDMGYICSVCLSIFCKQHKKCSTCGSVFGQANPEVKLPT 305
           LQLPK +GVDFRASCFCHK TIDMGYICSVCLSIFCK HKKCSTCGSVFGQA  +    +
Sbjct: 229 LQLPKSLGVDFRASCFCHKKTIDMGYICSVCLSIFCKHHKKCSTCGSVFGQAQLDASSTS 288

Query: 304 DRKRK 290
           +RKRK
Sbjct: 289 NRKRK 293



 Score =  148 bits (373), Expect(2) = 7e-91
 Identities = 85/152 (55%), Positives = 97/152 (63%), Gaps = 1/152 (0%)
 Frame = -3

Query: 1167 MDSAPSKQYSDDVSLVMVLLDTNPFFWGGENTTTKVSFSNFLIHVISFLNSXXXXXXXXX 988
            M SA SK Y+DDVSL+MVLLDTNPFFW   N    + FS FL HV++FLNS         
Sbjct: 1    MASAASKLYADDVSLLMVLLDTNPFFWSSSN----LPFSKFLPHVLAFLNSILLLNQLNQ 56

Query: 987  XXVIATGYNSCDYIFDSSTSESLNVSSGNGK-MPALCSKMLQKLEEFVIRDEQLSKENSP 811
              VI TGYNSC YI+DSS+    N  S +G+ MPA CS +LQKLEEFVI+DEQL KE S 
Sbjct: 57   VVVIXTGYNSCSYIYDSSSDS--NQGSDHGRIMPARCSXLLQKLEEFVIKDEQLFKEGSR 114

Query: 810  SGIVXXXXXXXXXXXLCYIQKVLRSGRLHPNP 715
             GI            LCYIQ+V RSG LHP P
Sbjct: 115  EGISSSLLSGSLSMALCYIQRVFRSGPLHPQP 146


>ref|XP_004290857.1| PREDICTED: general transcription factor IIH subunit 3 isoform X1
           [Fragaria vesca subsp. vesca]
          Length = 300

 Score =  215 bits (548), Expect(2) = 2e-90
 Identities = 103/126 (81%), Positives = 110/126 (87%)
 Frame = -2

Query: 664 FSAQRSMVPIDSCIVGVQHSAFLQQASYITGGVYLKPPQLDGLFQYLSTVFATDLHSRSF 485
           FSAQRSMVPIDSC +G  +SAFLQQASYITGGVYLKP Q DGL QYL+TVFATDLHSR+F
Sbjct: 168 FSAQRSMVPIDSCYMGSNNSAFLQQASYITGGVYLKPQQPDGLLQYLTTVFATDLHSRAF 227

Query: 484 LQLPKPVGVDFRASCFCHKSTIDMGYICSVCLSIFCKQHKKCSTCGSVFGQANPEVKLPT 305
           LQLPK  GVDFRASCFCHK TID GYICSVCLSIFCK HKKCSTCGSVFGQA  EV   T
Sbjct: 228 LQLPKSAGVDFRASCFCHKKTIDTGYICSVCLSIFCKHHKKCSTCGSVFGQAQSEVPSTT 287

Query: 304 DRKRKA 287
           ++KRK+
Sbjct: 288 NKKRKS 293



 Score =  147 bits (370), Expect(2) = 2e-90
 Identities = 80/151 (52%), Positives = 99/151 (65%)
 Frame = -3

Query: 1167 MDSAPSKQYSDDVSLVMVLLDTNPFFWGGENTTTKVSFSNFLIHVISFLNSXXXXXXXXX 988
            M S PSK Y+DDVSL+MVLLDTNPFFW    +++ + FS +L HV++FLNS         
Sbjct: 1    MASVPSKLYADDVSLLMVLLDTNPFFW----SSSSLPFSKYLSHVLTFLNSILLLNQLNQ 56

Query: 987  XXVIATGYNSCDYIFDSSTSESLNVSSGNGKMPALCSKMLQKLEEFVIRDEQLSKENSPS 808
              VIATGY+SC YI+DS+++      S  G+MPALCS +L+KLEEFV +DEQL KE S  
Sbjct: 57   VVVIATGYSSCSYIYDSASAPGQG--SDQGRMPALCSHLLKKLEEFVAKDEQLLKEGSAE 114

Query: 807  GIVXXXXXXXXXXXLCYIQKVLRSGRLHPNP 715
            GI            LCYIQKV RSG  HP+P
Sbjct: 115  GIPSSLLSGSLSMALCYIQKVFRSGPQHPHP 145