BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver29_contig00030354
         (2778 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_010258908.1| PREDICTED: CCR4-NOT transcription complex su...  1130   0.0  
ref|XP_010258902.1| PREDICTED: CCR4-NOT transcription complex su...  1130   0.0  
ref|XP_010258907.1| PREDICTED: CCR4-NOT transcription complex su...  1125   0.0  
ref|XP_010258906.1| PREDICTED: CCR4-NOT transcription complex su...  1125   0.0  
ref|XP_010258905.1| PREDICTED: CCR4-NOT transcription complex su...  1125   0.0  
ref|XP_010258901.1| PREDICTED: CCR4-NOT transcription complex su...  1125   0.0  
ref|XP_010258903.1| PREDICTED: CCR4-NOT transcription complex su...  1115   0.0  
ref|XP_010258904.1| PREDICTED: CCR4-NOT transcription complex su...  1107   0.0  
ref|XP_010662444.1| PREDICTED: CCR4-NOT transcription complex su...  1035   0.0  
gb|KJB49218.1| hypothetical protein B456_008G107100 [Gossypium r...   997   0.0  
gb|KJB49217.1| hypothetical protein B456_008G107100 [Gossypium r...   997   0.0  
ref|XP_012437512.1| PREDICTED: CCR4-NOT transcription complex su...   997   0.0  
gb|KJB49219.1| hypothetical protein B456_008G107100 [Gossypium r...   995   0.0  
ref|XP_006445336.1| hypothetical protein CICLE_v10018430mg [Citr...   994   0.0  
ref|XP_006445334.1| hypothetical protein CICLE_v10018430mg [Citr...   994   0.0  
ref|XP_006445333.1| hypothetical protein CICLE_v10018430mg [Citr...   994   0.0  
gb|KDO85685.1| hypothetical protein CISIN_1g0000721mg [Citrus si...   993   0.0  
gb|KDO85680.1| hypothetical protein CISIN_1g0000721mg, partial [...   993   0.0  
gb|KDO85679.1| hypothetical protein CISIN_1g0000721mg, partial [...   993   0.0  
gb|KDO85674.1| hypothetical protein CISIN_1g0000721mg, partial [...   993   0.0  

>ref|XP_010258908.1| PREDICTED: CCR4-NOT transcription complex subunit 1 isoform X8
            [Nelumbo nucifera]
          Length = 2437

 Score = 1130 bits (2924), Expect = 0.0
 Identities = 620/965 (64%), Positives = 720/965 (74%), Gaps = 39/965 (4%)
 Frame = -1

Query: 2778 EVLLKNLGVEMKDVKPTSLLKDRIRELEGNPDFSNKDVMATKPQIIPEVNPPI-----SV 2614
            EVL KNLGV+MKDVKPTSLLKDR+RE+EGNPDFSNKD+ A++ Q++ EVN  I      V
Sbjct: 1170 EVLFKNLGVDMKDVKPTSLLKDRVREVEGNPDFSNKDIGASQAQMVTEVNSGILSTLGQV 1229

Query: 2613 EPQADVVISSHPG----------------GLLTEDEKMPALTLPERLPSGQGLP-VTPSQ 2485
            E Q +VV  SHPG                G L EDEKM AL+L +RLPSGQGL  V PSQ
Sbjct: 1230 ELQPEVVNPSHPGHSNVLSQYATPLHLASGPLMEDEKMAALSLSDRLPSGQGLSQVAPSQ 1289

Query: 2484 SPFSVSQIPTPIANIGTDVIVNPKISALGLQLQFQRIVPMAMERAIKEIMSPVVQRSVTI 2305
            +PFSVSQ+PTPI NIGT VIVN K+S LGLQL FQRI+P+AMERAIKEI+SP+VQRSVTI
Sbjct: 1290 TPFSVSQLPTPIPNIGTHVIVNQKLSNLGLQLHFQRILPVAMERAIKEIISPIVQRSVTI 1349

Query: 2304 AIQTTKELVLKDYAMESDETRIYNAAHLMVASLAGSLAHVTCKEPLRVSISSHLRNMIQP 2125
            A+QTTKELVLKDYAMESDE+RIYNAAHLMVASLAGSLAHVTCKEPLR SISSHLRN++Q 
Sbjct: 1350 AMQTTKELVLKDYAMESDESRIYNAAHLMVASLAGSLAHVTCKEPLRGSISSHLRNLLQA 1409

Query: 2124 LNVSNDL-EQAVQISTNDNLDLGCAVVEKAAIEKALQTIDGEIAGQLAVRRKRRDAVGPA 1948
            L+++++L EQAVQ+ TNDNLDLGCAV+E+AA EKALQ+IDGEIA QL++RRK R+ VGP 
Sbjct: 1410 LSIASELLEQAVQLVTNDNLDLGCAVIEQAATEKALQSIDGEIAQQLSLRRKHREGVGPT 1469

Query: 1947 YFDATTYTQGPMGGVPEALRPKPGRLSLSQQRVXXN---------------ALPAVQNXX 1813
            YFDA+TYTQGPMG VPEALRPKPGRLS SQQRV  +                + A     
Sbjct: 1470 YFDASTYTQGPMGVVPEALRPKPGRLSHSQQRVYEDFVRFPWQNQPSQSSSTIAAGSPVS 1529

Query: 1812 XXXXXXXSLPRSYGLASGQPNPTLYSSTQGDPGFGSVVQPLALASEDMDPASTQILXXXX 1633
                    L R+YG  SGQ +  +YSS QG  GF +V QP+ + SE+MD ASTQ+L    
Sbjct: 1530 SGGSISSGLSRAYGSMSGQLSSGIYSSVQGGQGFSAVGQPMDIISEEMDAASTQLLSASS 1589

Query: 1632 XXXXXSDVVTQHGXXXXXXXXXXXSTIASTEPISVDPSDSTKDSGATAQPLPESFGTEHL 1453
                 +D V QH             +  + E +SV+PS S KDSGAT QP P     E L
Sbjct: 1590 PHIGVTDGVMQHTSEINSTVASFPPSAGAPELLSVEPSPSVKDSGATTQPSPTISAAERL 1649

Query: 1452 STSVGD-LLSTEDVLEKYHIVAQNLEDLISKDSKDVEVQGVIDEVPEIILXXXXXXXXXX 1276
               + + LLST D LEKY +VAQ LE  ++KD++D E+QGVI EVPEIIL          
Sbjct: 1650 GGGMSEPLLSTGDALEKYLLVAQKLEAFVAKDARDAEIQGVIAEVPEIILRCISRDEAAL 1709

Query: 1275 XXXXXVFKSLYGNTSNSTHVGAQIAILVALRDVCKVAVKEQLTVLVIYSEDEYKFNKDII 1096
                 VFKSLY N SNS HVGA +AIL A+RDVCK+ VKE LT  VIYS++E KFNK+I 
Sbjct: 1710 AVAQKVFKSLYENASNSVHVGAHLAILAAIRDVCKLVVKE-LTSWVIYSDEERKFNKEIT 1768

Query: 1095 VGLIRSELLNLAEYGMHMAKLIDAGRNTTATEFAISLLQALVTQESGIGVSELHNLIEAL 916
            VGLIRSELLNLAEY +HMAKLID GRN  ATEF+ISLLQ LV QESG+ VSELHNL++AL
Sbjct: 1769 VGLIRSELLNLAEYNVHMAKLIDGGRNKAATEFSISLLQTLVVQESGVSVSELHNLVDAL 1828

Query: 915  AKLTTRPGSPESLPQLLEIARDVSANTSAPSGYMVSNDEKANQARDRKAPSARPSVSRGD 736
            AKL  RPGSPESL QL+EIAR+ ++N++A SG  V  D+KA Q+RD+K PS R S+S  +
Sbjct: 1829 AKLAMRPGSPESLQQLVEIARNPASNSAALSGLAVGKDDKARQSRDKKVPSGR-SMSGRE 1887

Query: 735  DYNNVESMTADPHGFREQVSILFNEWYRISEAMGTNDVAVTRFVSQLQQSGLLKGDDMTD 556
            DYNN ES  ADP GFREQVS+LF EWYRI E  GTND A T ++SQLQQ+GLLK DDM+D
Sbjct: 1888 DYNNAES-AADPAGFREQVSVLFAEWYRICELPGTNDAAYTHYISQLQQNGLLKADDMSD 1946

Query: 555  CFFRLLTELSVTHCLSTEVFTPGXXXXXXXXXXXXXSFVAIDMYAKLVILILKYCAVDQG 376
             FFR+LTELSV HCLS+E                  SF+AIDMYAKLV+LI KYC VDQG
Sbjct: 1947 RFFRILTELSVAHCLSSESLQS-------PQQLQHLSFIAIDMYAKLVVLIFKYCVVDQG 1999

Query: 375  SNKLFLLPKILLVTVRVIQKDADEKKTAFNPRPYFRLFVNWLLDLGSPDSVLEGANFQIL 196
            S+KL LLPKIL VTVRVIQKDA+EKK +FNPRPYFRLF+NWLLDLGSPD +L+G+NFQ+L
Sbjct: 2000 SSKLLLLPKILAVTVRVIQKDAEEKKASFNPRPYFRLFINWLLDLGSPDPLLDGSNFQVL 2059

Query: 195  TAFANAFHTLQPLKVPGFSFAWLELVSHRSFMPKLLYGNSQKTSLYVQRLLVDLFKFMEP 16
            TAFANAFH LQPLKVPGFSFAWLELVSHRS+MPKLL  N QK   +VQRLLVDLFKF+EP
Sbjct: 2060 TAFANAFHALQPLKVPGFSFAWLELVSHRSYMPKLLTLNLQKGWPFVQRLLVDLFKFLEP 2119

Query: 15   YLRNA 1
            YLRNA
Sbjct: 2120 YLRNA 2124


>ref|XP_010258902.1| PREDICTED: CCR4-NOT transcription complex subunit 1 isoform X2
            [Nelumbo nucifera]
          Length = 2452

 Score = 1130 bits (2924), Expect = 0.0
 Identities = 620/965 (64%), Positives = 720/965 (74%), Gaps = 39/965 (4%)
 Frame = -1

Query: 2778 EVLLKNLGVEMKDVKPTSLLKDRIRELEGNPDFSNKDVMATKPQIIPEVNPPI-----SV 2614
            EVL KNLGV+MKDVKPTSLLKDR+RE+EGNPDFSNKD+ A++ Q++ EVN  I      V
Sbjct: 1185 EVLFKNLGVDMKDVKPTSLLKDRVREVEGNPDFSNKDIGASQAQMVTEVNSGILSTLGQV 1244

Query: 2613 EPQADVVISSHPG----------------GLLTEDEKMPALTLPERLPSGQGLP-VTPSQ 2485
            E Q +VV  SHPG                G L EDEKM AL+L +RLPSGQGL  V PSQ
Sbjct: 1245 ELQPEVVNPSHPGHSNVLSQYATPLHLASGPLMEDEKMAALSLSDRLPSGQGLSQVAPSQ 1304

Query: 2484 SPFSVSQIPTPIANIGTDVIVNPKISALGLQLQFQRIVPMAMERAIKEIMSPVVQRSVTI 2305
            +PFSVSQ+PTPI NIGT VIVN K+S LGLQL FQRI+P+AMERAIKEI+SP+VQRSVTI
Sbjct: 1305 TPFSVSQLPTPIPNIGTHVIVNQKLSNLGLQLHFQRILPVAMERAIKEIISPIVQRSVTI 1364

Query: 2304 AIQTTKELVLKDYAMESDETRIYNAAHLMVASLAGSLAHVTCKEPLRVSISSHLRNMIQP 2125
            A+QTTKELVLKDYAMESDE+RIYNAAHLMVASLAGSLAHVTCKEPLR SISSHLRN++Q 
Sbjct: 1365 AMQTTKELVLKDYAMESDESRIYNAAHLMVASLAGSLAHVTCKEPLRGSISSHLRNLLQA 1424

Query: 2124 LNVSNDL-EQAVQISTNDNLDLGCAVVEKAAIEKALQTIDGEIAGQLAVRRKRRDAVGPA 1948
            L+++++L EQAVQ+ TNDNLDLGCAV+E+AA EKALQ+IDGEIA QL++RRK R+ VGP 
Sbjct: 1425 LSIASELLEQAVQLVTNDNLDLGCAVIEQAATEKALQSIDGEIAQQLSLRRKHREGVGPT 1484

Query: 1947 YFDATTYTQGPMGGVPEALRPKPGRLSLSQQRVXXN---------------ALPAVQNXX 1813
            YFDA+TYTQGPMG VPEALRPKPGRLS SQQRV  +                + A     
Sbjct: 1485 YFDASTYTQGPMGVVPEALRPKPGRLSHSQQRVYEDFVRFPWQNQPSQSSSTIAAGSPVS 1544

Query: 1812 XXXXXXXSLPRSYGLASGQPNPTLYSSTQGDPGFGSVVQPLALASEDMDPASTQILXXXX 1633
                    L R+YG  SGQ +  +YSS QG  GF +V QP+ + SE+MD ASTQ+L    
Sbjct: 1545 SGGSISSGLSRAYGSMSGQLSSGIYSSVQGGQGFSAVGQPMDIISEEMDAASTQLLSASS 1604

Query: 1632 XXXXXSDVVTQHGXXXXXXXXXXXSTIASTEPISVDPSDSTKDSGATAQPLPESFGTEHL 1453
                 +D V QH             +  + E +SV+PS S KDSGAT QP P     E L
Sbjct: 1605 PHIGVTDGVMQHTSEINSTVASFPPSAGAPELLSVEPSPSVKDSGATTQPSPTISAAERL 1664

Query: 1452 STSVGD-LLSTEDVLEKYHIVAQNLEDLISKDSKDVEVQGVIDEVPEIILXXXXXXXXXX 1276
               + + LLST D LEKY +VAQ LE  ++KD++D E+QGVI EVPEIIL          
Sbjct: 1665 GGGMSEPLLSTGDALEKYLLVAQKLEAFVAKDARDAEIQGVIAEVPEIILRCISRDEAAL 1724

Query: 1275 XXXXXVFKSLYGNTSNSTHVGAQIAILVALRDVCKVAVKEQLTVLVIYSEDEYKFNKDII 1096
                 VFKSLY N SNS HVGA +AIL A+RDVCK+ VKE LT  VIYS++E KFNK+I 
Sbjct: 1725 AVAQKVFKSLYENASNSVHVGAHLAILAAIRDVCKLVVKE-LTSWVIYSDEERKFNKEIT 1783

Query: 1095 VGLIRSELLNLAEYGMHMAKLIDAGRNTTATEFAISLLQALVTQESGIGVSELHNLIEAL 916
            VGLIRSELLNLAEY +HMAKLID GRN  ATEF+ISLLQ LV QESG+ VSELHNL++AL
Sbjct: 1784 VGLIRSELLNLAEYNVHMAKLIDGGRNKAATEFSISLLQTLVVQESGVSVSELHNLVDAL 1843

Query: 915  AKLTTRPGSPESLPQLLEIARDVSANTSAPSGYMVSNDEKANQARDRKAPSARPSVSRGD 736
            AKL  RPGSPESL QL+EIAR+ ++N++A SG  V  D+KA Q+RD+K PS R S+S  +
Sbjct: 1844 AKLAMRPGSPESLQQLVEIARNPASNSAALSGLAVGKDDKARQSRDKKVPSGR-SMSGRE 1902

Query: 735  DYNNVESMTADPHGFREQVSILFNEWYRISEAMGTNDVAVTRFVSQLQQSGLLKGDDMTD 556
            DYNN ES  ADP GFREQVS+LF EWYRI E  GTND A T ++SQLQQ+GLLK DDM+D
Sbjct: 1903 DYNNAES-AADPAGFREQVSVLFAEWYRICELPGTNDAAYTHYISQLQQNGLLKADDMSD 1961

Query: 555  CFFRLLTELSVTHCLSTEVFTPGXXXXXXXXXXXXXSFVAIDMYAKLVILILKYCAVDQG 376
             FFR+LTELSV HCLS+E                  SF+AIDMYAKLV+LI KYC VDQG
Sbjct: 1962 RFFRILTELSVAHCLSSESLQS-------PQQLQHLSFIAIDMYAKLVVLIFKYCVVDQG 2014

Query: 375  SNKLFLLPKILLVTVRVIQKDADEKKTAFNPRPYFRLFVNWLLDLGSPDSVLEGANFQIL 196
            S+KL LLPKIL VTVRVIQKDA+EKK +FNPRPYFRLF+NWLLDLGSPD +L+G+NFQ+L
Sbjct: 2015 SSKLLLLPKILAVTVRVIQKDAEEKKASFNPRPYFRLFINWLLDLGSPDPLLDGSNFQVL 2074

Query: 195  TAFANAFHTLQPLKVPGFSFAWLELVSHRSFMPKLLYGNSQKTSLYVQRLLVDLFKFMEP 16
            TAFANAFH LQPLKVPGFSFAWLELVSHRS+MPKLL  N QK   +VQRLLVDLFKF+EP
Sbjct: 2075 TAFANAFHALQPLKVPGFSFAWLELVSHRSYMPKLLTLNLQKGWPFVQRLLVDLFKFLEP 2134

Query: 15   YLRNA 1
            YLRNA
Sbjct: 2135 YLRNA 2139


>ref|XP_010258907.1| PREDICTED: CCR4-NOT transcription complex subunit 1 isoform X7
            [Nelumbo nucifera]
          Length = 2439

 Score = 1125 bits (2911), Expect = 0.0
 Identities = 620/967 (64%), Positives = 720/967 (74%), Gaps = 41/967 (4%)
 Frame = -1

Query: 2778 EVLLKNLGVEMKDVKPTSLLKDRIRELEGNPDFSNKDVMATKPQIIPEVNPPI-----SV 2614
            EVL KNLGV+MKDVKPTSLLKDR+RE+EGNPDFSNKD+ A++ Q++ EVN  I      V
Sbjct: 1170 EVLFKNLGVDMKDVKPTSLLKDRVREVEGNPDFSNKDIGASQAQMVTEVNSGILSTLGQV 1229

Query: 2613 EPQADVVISSHPG----------------GLLTEDEKMPALTLPERLPSGQGLP-VTPSQ 2485
            E Q +VV  SHPG                G L EDEKM AL+L +RLPSGQGL  V PSQ
Sbjct: 1230 ELQPEVVNPSHPGHSNVLSQYATPLHLASGPLMEDEKMAALSLSDRLPSGQGLSQVAPSQ 1289

Query: 2484 SPFSVSQIPTPIANIGTDVIVNPKISALGLQLQFQRIVPMAMERAIKEIMSPVVQRSVTI 2305
            +PFSVSQ+PTPI NIGT VIVN K+S LGLQL FQRI+P+AMERAIKEI+SP+VQRSVTI
Sbjct: 1290 TPFSVSQLPTPIPNIGTHVIVNQKLSNLGLQLHFQRILPVAMERAIKEIISPIVQRSVTI 1349

Query: 2304 AIQTTKELVLKDYAMESDETRIYNAAHLMVASLAGSLAHVTCKEPLRVSISSHLRNMIQP 2125
            A+QTTKELVLKDYAMESDE+RIYNAAHLMVASLAGSLAHVTCKEPLR SISSHLRN++Q 
Sbjct: 1350 AMQTTKELVLKDYAMESDESRIYNAAHLMVASLAGSLAHVTCKEPLRGSISSHLRNLLQA 1409

Query: 2124 LNVSNDL-EQAVQISTNDNLDLGCAVVEKAAIEKALQTIDGEIAGQLAVRRKRRDAVGPA 1948
            L+++++L EQAVQ+ TNDNLDLGCAV+E+AA EKALQ+IDGEIA QL++RRK R+ VGP 
Sbjct: 1410 LSIASELLEQAVQLVTNDNLDLGCAVIEQAATEKALQSIDGEIAQQLSLRRKHREGVGPT 1469

Query: 1947 YFDATTYTQGPMGGVPEALRPKPGRLSLSQQRVXXN---------------ALPAVQNXX 1813
            YFDA+TYTQGPMG VPEALRPKPGRLS SQQRV  +                + A     
Sbjct: 1470 YFDASTYTQGPMGVVPEALRPKPGRLSHSQQRVYEDFVRFPWQNQPSQSSSTIAAGSPVS 1529

Query: 1812 XXXXXXXSLPRSYGLASGQPNPTLYSSTQGDPGFGSVVQPLALASEDMDPASTQILXXXX 1633
                    L R+YG  SGQ +  +YSS QG  GF +V QP+ + SE+MD ASTQ+L    
Sbjct: 1530 SGGSISSGLSRAYGSMSGQLSSGIYSSVQGGQGFSAVGQPMDIISEEMDAASTQLLSASS 1589

Query: 1632 XXXXXSDVVTQHGXXXXXXXXXXXSTIASTEPISVDPSDSTKDSGATAQPLPESFGTEHL 1453
                 +D V QH             +  + E +SV+PS S KDSGAT QP P     E L
Sbjct: 1590 PHIGVTDGVMQHTSEINSTVASFPPSAGAPELLSVEPSPSVKDSGATTQPSPTISAAERL 1649

Query: 1452 STSVGD-LLSTEDVLEKYHIVAQNLEDLISKDSKDVEVQGVIDEVPEIILXXXXXXXXXX 1276
               + + LLST D LEKY +VAQ LE  ++KD++D E+QGVI EVPEIIL          
Sbjct: 1650 GGGMSEPLLSTGDALEKYLLVAQKLEAFVAKDARDAEIQGVIAEVPEIILRCISRDEAAL 1709

Query: 1275 XXXXXVFKSLYGNTSNSTHVGAQIAILVALRDVCKVAVKEQLTVLVIYSEDEYKFNKDII 1096
                 VFKSLY N SNS HVGA +AIL A+RDVCK+ VKE LT  VIYS++E KFNK+I 
Sbjct: 1710 AVAQKVFKSLYENASNSVHVGAHLAILAAIRDVCKLVVKE-LTSWVIYSDEERKFNKEIT 1768

Query: 1095 VGLIRSELLNLAEYGMHMAKLIDAGRNTTATEFAISLLQALVTQESGIGVSELHNLIEAL 916
            VGLIRSELLNLAEY +HMAKLID GRN  ATEF+ISLLQ LV QESG+ VSELHNL++AL
Sbjct: 1769 VGLIRSELLNLAEYNVHMAKLIDGGRNKAATEFSISLLQTLVVQESGVSVSELHNLVDAL 1828

Query: 915  AK--LTTRPGSPESLPQLLEIARDVSANTSAPSGYMVSNDEKANQARDRKAPSARPSVSR 742
            AK  L  RPGSPESL QL+EIAR+ ++N++A SG  V  D+KA Q+RD+K PS R S+S 
Sbjct: 1829 AKFQLAMRPGSPESLQQLVEIARNPASNSAALSGLAVGKDDKARQSRDKKVPSGR-SMSG 1887

Query: 741  GDDYNNVESMTADPHGFREQVSILFNEWYRISEAMGTNDVAVTRFVSQLQQSGLLKGDDM 562
             +DYNN ES  ADP GFREQVS+LF EWYRI E  GTND A T ++SQLQQ+GLLK DDM
Sbjct: 1888 REDYNNAES-AADPAGFREQVSVLFAEWYRICELPGTNDAAYTHYISQLQQNGLLKADDM 1946

Query: 561  TDCFFRLLTELSVTHCLSTEVFTPGXXXXXXXXXXXXXSFVAIDMYAKLVILILKYCAVD 382
            +D FFR+LTELSV HCLS+E                  SF+AIDMYAKLV+LI KYC VD
Sbjct: 1947 SDRFFRILTELSVAHCLSSESLQS-------PQQLQHLSFIAIDMYAKLVVLIFKYCVVD 1999

Query: 381  QGSNKLFLLPKILLVTVRVIQKDADEKKTAFNPRPYFRLFVNWLLDLGSPDSVLEGANFQ 202
            QGS+KL LLPKIL VTVRVIQKDA+EKK +FNPRPYFRLF+NWLLDLGSPD +L+G+NFQ
Sbjct: 2000 QGSSKLLLLPKILAVTVRVIQKDAEEKKASFNPRPYFRLFINWLLDLGSPDPLLDGSNFQ 2059

Query: 201  ILTAFANAFHTLQPLKVPGFSFAWLELVSHRSFMPKLLYGNSQKTSLYVQRLLVDLFKFM 22
            +LTAFANAFH LQPLKVPGFSFAWLELVSHRS+MPKLL  N QK   +VQRLLVDLFKF+
Sbjct: 2060 VLTAFANAFHALQPLKVPGFSFAWLELVSHRSYMPKLLTLNLQKGWPFVQRLLVDLFKFL 2119

Query: 21   EPYLRNA 1
            EPYLRNA
Sbjct: 2120 EPYLRNA 2126


>ref|XP_010258906.1| PREDICTED: CCR4-NOT transcription complex subunit 1 isoform X6
            [Nelumbo nucifera]
          Length = 2446

 Score = 1125 bits (2911), Expect = 0.0
 Identities = 620/967 (64%), Positives = 720/967 (74%), Gaps = 41/967 (4%)
 Frame = -1

Query: 2778 EVLLKNLGVEMKDVKPTSLLKDRIRELEGNPDFSNKDVMATKPQIIPEVNPPI-----SV 2614
            EVL KNLGV+MKDVKPTSLLKDR+RE+EGNPDFSNKD+ A++ Q++ EVN  I      V
Sbjct: 1177 EVLFKNLGVDMKDVKPTSLLKDRVREVEGNPDFSNKDIGASQAQMVTEVNSGILSTLGQV 1236

Query: 2613 EPQADVVISSHPG----------------GLLTEDEKMPALTLPERLPSGQGLP-VTPSQ 2485
            E Q +VV  SHPG                G L EDEKM AL+L +RLPSGQGL  V PSQ
Sbjct: 1237 ELQPEVVNPSHPGHSNVLSQYATPLHLASGPLMEDEKMAALSLSDRLPSGQGLSQVAPSQ 1296

Query: 2484 SPFSVSQIPTPIANIGTDVIVNPKISALGLQLQFQRIVPMAMERAIKEIMSPVVQRSVTI 2305
            +PFSVSQ+PTPI NIGT VIVN K+S LGLQL FQRI+P+AMERAIKEI+SP+VQRSVTI
Sbjct: 1297 TPFSVSQLPTPIPNIGTHVIVNQKLSNLGLQLHFQRILPVAMERAIKEIISPIVQRSVTI 1356

Query: 2304 AIQTTKELVLKDYAMESDETRIYNAAHLMVASLAGSLAHVTCKEPLRVSISSHLRNMIQP 2125
            A+QTTKELVLKDYAMESDE+RIYNAAHLMVASLAGSLAHVTCKEPLR SISSHLRN++Q 
Sbjct: 1357 AMQTTKELVLKDYAMESDESRIYNAAHLMVASLAGSLAHVTCKEPLRGSISSHLRNLLQA 1416

Query: 2124 LNVSNDL-EQAVQISTNDNLDLGCAVVEKAAIEKALQTIDGEIAGQLAVRRKRRDAVGPA 1948
            L+++++L EQAVQ+ TNDNLDLGCAV+E+AA EKALQ+IDGEIA QL++RRK R+ VGP 
Sbjct: 1417 LSIASELLEQAVQLVTNDNLDLGCAVIEQAATEKALQSIDGEIAQQLSLRRKHREGVGPT 1476

Query: 1947 YFDATTYTQGPMGGVPEALRPKPGRLSLSQQRVXXN---------------ALPAVQNXX 1813
            YFDA+TYTQGPMG VPEALRPKPGRLS SQQRV  +                + A     
Sbjct: 1477 YFDASTYTQGPMGVVPEALRPKPGRLSHSQQRVYEDFVRFPWQNQPSQSSSTIAAGSPVS 1536

Query: 1812 XXXXXXXSLPRSYGLASGQPNPTLYSSTQGDPGFGSVVQPLALASEDMDPASTQILXXXX 1633
                    L R+YG  SGQ +  +YSS QG  GF +V QP+ + SE+MD ASTQ+L    
Sbjct: 1537 SGGSISSGLSRAYGSMSGQLSSGIYSSVQGGQGFSAVGQPMDIISEEMDAASTQLLSASS 1596

Query: 1632 XXXXXSDVVTQHGXXXXXXXXXXXSTIASTEPISVDPSDSTKDSGATAQPLPESFGTEHL 1453
                 +D V QH             +  + E +SV+PS S KDSGAT QP P     E L
Sbjct: 1597 PHIGVTDGVMQHTSEINSTVASFPPSAGAPELLSVEPSPSVKDSGATTQPSPTISAAERL 1656

Query: 1452 STSVGD-LLSTEDVLEKYHIVAQNLEDLISKDSKDVEVQGVIDEVPEIILXXXXXXXXXX 1276
               + + LLST D LEKY +VAQ LE  ++KD++D E+QGVI EVPEIIL          
Sbjct: 1657 GGGMSEPLLSTGDALEKYLLVAQKLEAFVAKDARDAEIQGVIAEVPEIILRCISRDEAAL 1716

Query: 1275 XXXXXVFKSLYGNTSNSTHVGAQIAILVALRDVCKVAVKEQLTVLVIYSEDEYKFNKDII 1096
                 VFKSLY N SNS HVGA +AIL A+RDVCK+ VKE LT  VIYS++E KFNK+I 
Sbjct: 1717 AVAQKVFKSLYENASNSVHVGAHLAILAAIRDVCKLVVKE-LTSWVIYSDEERKFNKEIT 1775

Query: 1095 VGLIRSELLNLAEYGMHMAKLIDAGRNTTATEFAISLLQALVTQESGIGVSELHNLIEAL 916
            VGLIRSELLNLAEY +HMAKLID GRN  ATEF+ISLLQ LV QESG+ VSELHNL++AL
Sbjct: 1776 VGLIRSELLNLAEYNVHMAKLIDGGRNKAATEFSISLLQTLVVQESGVSVSELHNLVDAL 1835

Query: 915  AK--LTTRPGSPESLPQLLEIARDVSANTSAPSGYMVSNDEKANQARDRKAPSARPSVSR 742
            AK  L  RPGSPESL QL+EIAR+ ++N++A SG  V  D+KA Q+RD+K PS R S+S 
Sbjct: 1836 AKFQLAMRPGSPESLQQLVEIARNPASNSAALSGLAVGKDDKARQSRDKKVPSGR-SMSG 1894

Query: 741  GDDYNNVESMTADPHGFREQVSILFNEWYRISEAMGTNDVAVTRFVSQLQQSGLLKGDDM 562
             +DYNN ES  ADP GFREQVS+LF EWYRI E  GTND A T ++SQLQQ+GLLK DDM
Sbjct: 1895 REDYNNAES-AADPAGFREQVSVLFAEWYRICELPGTNDAAYTHYISQLQQNGLLKADDM 1953

Query: 561  TDCFFRLLTELSVTHCLSTEVFTPGXXXXXXXXXXXXXSFVAIDMYAKLVILILKYCAVD 382
            +D FFR+LTELSV HCLS+E                  SF+AIDMYAKLV+LI KYC VD
Sbjct: 1954 SDRFFRILTELSVAHCLSSESLQS-------PQQLQHLSFIAIDMYAKLVVLIFKYCVVD 2006

Query: 381  QGSNKLFLLPKILLVTVRVIQKDADEKKTAFNPRPYFRLFVNWLLDLGSPDSVLEGANFQ 202
            QGS+KL LLPKIL VTVRVIQKDA+EKK +FNPRPYFRLF+NWLLDLGSPD +L+G+NFQ
Sbjct: 2007 QGSSKLLLLPKILAVTVRVIQKDAEEKKASFNPRPYFRLFINWLLDLGSPDPLLDGSNFQ 2066

Query: 201  ILTAFANAFHTLQPLKVPGFSFAWLELVSHRSFMPKLLYGNSQKTSLYVQRLLVDLFKFM 22
            +LTAFANAFH LQPLKVPGFSFAWLELVSHRS+MPKLL  N QK   +VQRLLVDLFKF+
Sbjct: 2067 VLTAFANAFHALQPLKVPGFSFAWLELVSHRSYMPKLLTLNLQKGWPFVQRLLVDLFKFL 2126

Query: 21   EPYLRNA 1
            EPYLRNA
Sbjct: 2127 EPYLRNA 2133


>ref|XP_010258905.1| PREDICTED: CCR4-NOT transcription complex subunit 1 isoform X5
            [Nelumbo nucifera]
          Length = 2447

 Score = 1125 bits (2911), Expect = 0.0
 Identities = 620/967 (64%), Positives = 720/967 (74%), Gaps = 41/967 (4%)
 Frame = -1

Query: 2778 EVLLKNLGVEMKDVKPTSLLKDRIRELEGNPDFSNKDVMATKPQIIPEVNPPI-----SV 2614
            EVL KNLGV+MKDVKPTSLLKDR+RE+EGNPDFSNKD+ A++ Q++ EVN  I      V
Sbjct: 1178 EVLFKNLGVDMKDVKPTSLLKDRVREVEGNPDFSNKDIGASQAQMVTEVNSGILSTLGQV 1237

Query: 2613 EPQADVVISSHPG----------------GLLTEDEKMPALTLPERLPSGQGLP-VTPSQ 2485
            E Q +VV  SHPG                G L EDEKM AL+L +RLPSGQGL  V PSQ
Sbjct: 1238 ELQPEVVNPSHPGHSNVLSQYATPLHLASGPLMEDEKMAALSLSDRLPSGQGLSQVAPSQ 1297

Query: 2484 SPFSVSQIPTPIANIGTDVIVNPKISALGLQLQFQRIVPMAMERAIKEIMSPVVQRSVTI 2305
            +PFSVSQ+PTPI NIGT VIVN K+S LGLQL FQRI+P+AMERAIKEI+SP+VQRSVTI
Sbjct: 1298 TPFSVSQLPTPIPNIGTHVIVNQKLSNLGLQLHFQRILPVAMERAIKEIISPIVQRSVTI 1357

Query: 2304 AIQTTKELVLKDYAMESDETRIYNAAHLMVASLAGSLAHVTCKEPLRVSISSHLRNMIQP 2125
            A+QTTKELVLKDYAMESDE+RIYNAAHLMVASLAGSLAHVTCKEPLR SISSHLRN++Q 
Sbjct: 1358 AMQTTKELVLKDYAMESDESRIYNAAHLMVASLAGSLAHVTCKEPLRGSISSHLRNLLQA 1417

Query: 2124 LNVSNDL-EQAVQISTNDNLDLGCAVVEKAAIEKALQTIDGEIAGQLAVRRKRRDAVGPA 1948
            L+++++L EQAVQ+ TNDNLDLGCAV+E+AA EKALQ+IDGEIA QL++RRK R+ VGP 
Sbjct: 1418 LSIASELLEQAVQLVTNDNLDLGCAVIEQAATEKALQSIDGEIAQQLSLRRKHREGVGPT 1477

Query: 1947 YFDATTYTQGPMGGVPEALRPKPGRLSLSQQRVXXN---------------ALPAVQNXX 1813
            YFDA+TYTQGPMG VPEALRPKPGRLS SQQRV  +                + A     
Sbjct: 1478 YFDASTYTQGPMGVVPEALRPKPGRLSHSQQRVYEDFVRFPWQNQPSQSSSTIAAGSPVS 1537

Query: 1812 XXXXXXXSLPRSYGLASGQPNPTLYSSTQGDPGFGSVVQPLALASEDMDPASTQILXXXX 1633
                    L R+YG  SGQ +  +YSS QG  GF +V QP+ + SE+MD ASTQ+L    
Sbjct: 1538 SGGSISSGLSRAYGSMSGQLSSGIYSSVQGGQGFSAVGQPMDIISEEMDAASTQLLSASS 1597

Query: 1632 XXXXXSDVVTQHGXXXXXXXXXXXSTIASTEPISVDPSDSTKDSGATAQPLPESFGTEHL 1453
                 +D V QH             +  + E +SV+PS S KDSGAT QP P     E L
Sbjct: 1598 PHIGVTDGVMQHTSEINSTVASFPPSAGAPELLSVEPSPSVKDSGATTQPSPTISAAERL 1657

Query: 1452 STSVGD-LLSTEDVLEKYHIVAQNLEDLISKDSKDVEVQGVIDEVPEIILXXXXXXXXXX 1276
               + + LLST D LEKY +VAQ LE  ++KD++D E+QGVI EVPEIIL          
Sbjct: 1658 GGGMSEPLLSTGDALEKYLLVAQKLEAFVAKDARDAEIQGVIAEVPEIILRCISRDEAAL 1717

Query: 1275 XXXXXVFKSLYGNTSNSTHVGAQIAILVALRDVCKVAVKEQLTVLVIYSEDEYKFNKDII 1096
                 VFKSLY N SNS HVGA +AIL A+RDVCK+ VKE LT  VIYS++E KFNK+I 
Sbjct: 1718 AVAQKVFKSLYENASNSVHVGAHLAILAAIRDVCKLVVKE-LTSWVIYSDEERKFNKEIT 1776

Query: 1095 VGLIRSELLNLAEYGMHMAKLIDAGRNTTATEFAISLLQALVTQESGIGVSELHNLIEAL 916
            VGLIRSELLNLAEY +HMAKLID GRN  ATEF+ISLLQ LV QESG+ VSELHNL++AL
Sbjct: 1777 VGLIRSELLNLAEYNVHMAKLIDGGRNKAATEFSISLLQTLVVQESGVSVSELHNLVDAL 1836

Query: 915  AK--LTTRPGSPESLPQLLEIARDVSANTSAPSGYMVSNDEKANQARDRKAPSARPSVSR 742
            AK  L  RPGSPESL QL+EIAR+ ++N++A SG  V  D+KA Q+RD+K PS R S+S 
Sbjct: 1837 AKFQLAMRPGSPESLQQLVEIARNPASNSAALSGLAVGKDDKARQSRDKKVPSGR-SMSG 1895

Query: 741  GDDYNNVESMTADPHGFREQVSILFNEWYRISEAMGTNDVAVTRFVSQLQQSGLLKGDDM 562
             +DYNN ES  ADP GFREQVS+LF EWYRI E  GTND A T ++SQLQQ+GLLK DDM
Sbjct: 1896 REDYNNAES-AADPAGFREQVSVLFAEWYRICELPGTNDAAYTHYISQLQQNGLLKADDM 1954

Query: 561  TDCFFRLLTELSVTHCLSTEVFTPGXXXXXXXXXXXXXSFVAIDMYAKLVILILKYCAVD 382
            +D FFR+LTELSV HCLS+E                  SF+AIDMYAKLV+LI KYC VD
Sbjct: 1955 SDRFFRILTELSVAHCLSSESLQS-------PQQLQHLSFIAIDMYAKLVVLIFKYCVVD 2007

Query: 381  QGSNKLFLLPKILLVTVRVIQKDADEKKTAFNPRPYFRLFVNWLLDLGSPDSVLEGANFQ 202
            QGS+KL LLPKIL VTVRVIQKDA+EKK +FNPRPYFRLF+NWLLDLGSPD +L+G+NFQ
Sbjct: 2008 QGSSKLLLLPKILAVTVRVIQKDAEEKKASFNPRPYFRLFINWLLDLGSPDPLLDGSNFQ 2067

Query: 201  ILTAFANAFHTLQPLKVPGFSFAWLELVSHRSFMPKLLYGNSQKTSLYVQRLLVDLFKFM 22
            +LTAFANAFH LQPLKVPGFSFAWLELVSHRS+MPKLL  N QK   +VQRLLVDLFKF+
Sbjct: 2068 VLTAFANAFHALQPLKVPGFSFAWLELVSHRSYMPKLLTLNLQKGWPFVQRLLVDLFKFL 2127

Query: 21   EPYLRNA 1
            EPYLRNA
Sbjct: 2128 EPYLRNA 2134


>ref|XP_010258901.1| PREDICTED: CCR4-NOT transcription complex subunit 1 isoform X1
            [Nelumbo nucifera]
          Length = 2454

 Score = 1125 bits (2911), Expect = 0.0
 Identities = 620/967 (64%), Positives = 720/967 (74%), Gaps = 41/967 (4%)
 Frame = -1

Query: 2778 EVLLKNLGVEMKDVKPTSLLKDRIRELEGNPDFSNKDVMATKPQIIPEVNPPI-----SV 2614
            EVL KNLGV+MKDVKPTSLLKDR+RE+EGNPDFSNKD+ A++ Q++ EVN  I      V
Sbjct: 1185 EVLFKNLGVDMKDVKPTSLLKDRVREVEGNPDFSNKDIGASQAQMVTEVNSGILSTLGQV 1244

Query: 2613 EPQADVVISSHPG----------------GLLTEDEKMPALTLPERLPSGQGLP-VTPSQ 2485
            E Q +VV  SHPG                G L EDEKM AL+L +RLPSGQGL  V PSQ
Sbjct: 1245 ELQPEVVNPSHPGHSNVLSQYATPLHLASGPLMEDEKMAALSLSDRLPSGQGLSQVAPSQ 1304

Query: 2484 SPFSVSQIPTPIANIGTDVIVNPKISALGLQLQFQRIVPMAMERAIKEIMSPVVQRSVTI 2305
            +PFSVSQ+PTPI NIGT VIVN K+S LGLQL FQRI+P+AMERAIKEI+SP+VQRSVTI
Sbjct: 1305 TPFSVSQLPTPIPNIGTHVIVNQKLSNLGLQLHFQRILPVAMERAIKEIISPIVQRSVTI 1364

Query: 2304 AIQTTKELVLKDYAMESDETRIYNAAHLMVASLAGSLAHVTCKEPLRVSISSHLRNMIQP 2125
            A+QTTKELVLKDYAMESDE+RIYNAAHLMVASLAGSLAHVTCKEPLR SISSHLRN++Q 
Sbjct: 1365 AMQTTKELVLKDYAMESDESRIYNAAHLMVASLAGSLAHVTCKEPLRGSISSHLRNLLQA 1424

Query: 2124 LNVSNDL-EQAVQISTNDNLDLGCAVVEKAAIEKALQTIDGEIAGQLAVRRKRRDAVGPA 1948
            L+++++L EQAVQ+ TNDNLDLGCAV+E+AA EKALQ+IDGEIA QL++RRK R+ VGP 
Sbjct: 1425 LSIASELLEQAVQLVTNDNLDLGCAVIEQAATEKALQSIDGEIAQQLSLRRKHREGVGPT 1484

Query: 1947 YFDATTYTQGPMGGVPEALRPKPGRLSLSQQRVXXN---------------ALPAVQNXX 1813
            YFDA+TYTQGPMG VPEALRPKPGRLS SQQRV  +                + A     
Sbjct: 1485 YFDASTYTQGPMGVVPEALRPKPGRLSHSQQRVYEDFVRFPWQNQPSQSSSTIAAGSPVS 1544

Query: 1812 XXXXXXXSLPRSYGLASGQPNPTLYSSTQGDPGFGSVVQPLALASEDMDPASTQILXXXX 1633
                    L R+YG  SGQ +  +YSS QG  GF +V QP+ + SE+MD ASTQ+L    
Sbjct: 1545 SGGSISSGLSRAYGSMSGQLSSGIYSSVQGGQGFSAVGQPMDIISEEMDAASTQLLSASS 1604

Query: 1632 XXXXXSDVVTQHGXXXXXXXXXXXSTIASTEPISVDPSDSTKDSGATAQPLPESFGTEHL 1453
                 +D V QH             +  + E +SV+PS S KDSGAT QP P     E L
Sbjct: 1605 PHIGVTDGVMQHTSEINSTVASFPPSAGAPELLSVEPSPSVKDSGATTQPSPTISAAERL 1664

Query: 1452 STSVGD-LLSTEDVLEKYHIVAQNLEDLISKDSKDVEVQGVIDEVPEIILXXXXXXXXXX 1276
               + + LLST D LEKY +VAQ LE  ++KD++D E+QGVI EVPEIIL          
Sbjct: 1665 GGGMSEPLLSTGDALEKYLLVAQKLEAFVAKDARDAEIQGVIAEVPEIILRCISRDEAAL 1724

Query: 1275 XXXXXVFKSLYGNTSNSTHVGAQIAILVALRDVCKVAVKEQLTVLVIYSEDEYKFNKDII 1096
                 VFKSLY N SNS HVGA +AIL A+RDVCK+ VKE LT  VIYS++E KFNK+I 
Sbjct: 1725 AVAQKVFKSLYENASNSVHVGAHLAILAAIRDVCKLVVKE-LTSWVIYSDEERKFNKEIT 1783

Query: 1095 VGLIRSELLNLAEYGMHMAKLIDAGRNTTATEFAISLLQALVTQESGIGVSELHNLIEAL 916
            VGLIRSELLNLAEY +HMAKLID GRN  ATEF+ISLLQ LV QESG+ VSELHNL++AL
Sbjct: 1784 VGLIRSELLNLAEYNVHMAKLIDGGRNKAATEFSISLLQTLVVQESGVSVSELHNLVDAL 1843

Query: 915  AK--LTTRPGSPESLPQLLEIARDVSANTSAPSGYMVSNDEKANQARDRKAPSARPSVSR 742
            AK  L  RPGSPESL QL+EIAR+ ++N++A SG  V  D+KA Q+RD+K PS R S+S 
Sbjct: 1844 AKFQLAMRPGSPESLQQLVEIARNPASNSAALSGLAVGKDDKARQSRDKKVPSGR-SMSG 1902

Query: 741  GDDYNNVESMTADPHGFREQVSILFNEWYRISEAMGTNDVAVTRFVSQLQQSGLLKGDDM 562
             +DYNN ES  ADP GFREQVS+LF EWYRI E  GTND A T ++SQLQQ+GLLK DDM
Sbjct: 1903 REDYNNAES-AADPAGFREQVSVLFAEWYRICELPGTNDAAYTHYISQLQQNGLLKADDM 1961

Query: 561  TDCFFRLLTELSVTHCLSTEVFTPGXXXXXXXXXXXXXSFVAIDMYAKLVILILKYCAVD 382
            +D FFR+LTELSV HCLS+E                  SF+AIDMYAKLV+LI KYC VD
Sbjct: 1962 SDRFFRILTELSVAHCLSSESLQS-------PQQLQHLSFIAIDMYAKLVVLIFKYCVVD 2014

Query: 381  QGSNKLFLLPKILLVTVRVIQKDADEKKTAFNPRPYFRLFVNWLLDLGSPDSVLEGANFQ 202
            QGS+KL LLPKIL VTVRVIQKDA+EKK +FNPRPYFRLF+NWLLDLGSPD +L+G+NFQ
Sbjct: 2015 QGSSKLLLLPKILAVTVRVIQKDAEEKKASFNPRPYFRLFINWLLDLGSPDPLLDGSNFQ 2074

Query: 201  ILTAFANAFHTLQPLKVPGFSFAWLELVSHRSFMPKLLYGNSQKTSLYVQRLLVDLFKFM 22
            +LTAFANAFH LQPLKVPGFSFAWLELVSHRS+MPKLL  N QK   +VQRLLVDLFKF+
Sbjct: 2075 VLTAFANAFHALQPLKVPGFSFAWLELVSHRSYMPKLLTLNLQKGWPFVQRLLVDLFKFL 2134

Query: 21   EPYLRNA 1
            EPYLRNA
Sbjct: 2135 EPYLRNA 2141


>ref|XP_010258903.1| PREDICTED: CCR4-NOT transcription complex subunit 1 isoform X3
            [Nelumbo nucifera]
          Length = 2451

 Score = 1115 bits (2884), Expect = 0.0
 Identities = 617/967 (63%), Positives = 717/967 (74%), Gaps = 41/967 (4%)
 Frame = -1

Query: 2778 EVLLKNLGVEMKDVKPTSLLKDRIRELEGNPDFSNKDVMATKPQIIPEVNPPI-----SV 2614
            EVL KNLGV+MKDVKPTSLLKDR+RE+EGNPDFSNKD+ A++ Q++ EVN  I      V
Sbjct: 1185 EVLFKNLGVDMKDVKPTSLLKDRVREVEGNPDFSNKDIGASQAQMVTEVNSGILSTLGQV 1244

Query: 2613 EPQADVVISSHPG----------------GLLTEDEKMPALTLPERLPSGQGLP-VTPSQ 2485
            E Q +VV  SHPG                G L EDEKM AL+L +RLPSGQGL  V PSQ
Sbjct: 1245 ELQPEVVNPSHPGHSNVLSQYATPLHLASGPLMEDEKMAALSLSDRLPSGQGLSQVAPSQ 1304

Query: 2484 SPFSVSQIPTPIANIGTDVIVNPKISALGLQLQFQRIVPMAMERAIKEIMSPVVQRSVTI 2305
            +PFS   +PTPI NIGT VIVN K+S LGLQL FQRI+P+AMERAIKEI+SP+VQRSVTI
Sbjct: 1305 TPFS---LPTPIPNIGTHVIVNQKLSNLGLQLHFQRILPVAMERAIKEIISPIVQRSVTI 1361

Query: 2304 AIQTTKELVLKDYAMESDETRIYNAAHLMVASLAGSLAHVTCKEPLRVSISSHLRNMIQP 2125
            A+QTTKELVLKDYAMESDE+RIYNAAHLMVASLAGSLAHVTCKEPLR SISSHLRN++Q 
Sbjct: 1362 AMQTTKELVLKDYAMESDESRIYNAAHLMVASLAGSLAHVTCKEPLRGSISSHLRNLLQA 1421

Query: 2124 LNVSNDL-EQAVQISTNDNLDLGCAVVEKAAIEKALQTIDGEIAGQLAVRRKRRDAVGPA 1948
            L+++++L EQAVQ+ TNDNLDLGCAV+E+AA EKALQ+IDGEIA QL++RRK R+ VGP 
Sbjct: 1422 LSIASELLEQAVQLVTNDNLDLGCAVIEQAATEKALQSIDGEIAQQLSLRRKHREGVGPT 1481

Query: 1947 YFDATTYTQGPMGGVPEALRPKPGRLSLSQQRVXXN---------------ALPAVQNXX 1813
            YFDA+TYTQGPMG VPEALRPKPGRLS SQQRV  +                + A     
Sbjct: 1482 YFDASTYTQGPMGVVPEALRPKPGRLSHSQQRVYEDFVRFPWQNQPSQSSSTIAAGSPVS 1541

Query: 1812 XXXXXXXSLPRSYGLASGQPNPTLYSSTQGDPGFGSVVQPLALASEDMDPASTQILXXXX 1633
                    L R+YG  SGQ +  +YSS QG  GF +V QP+ + SE+MD ASTQ+L    
Sbjct: 1542 SGGSISSGLSRAYGSMSGQLSSGIYSSVQGGQGFSAVGQPMDIISEEMDAASTQLLSASS 1601

Query: 1632 XXXXXSDVVTQHGXXXXXXXXXXXSTIASTEPISVDPSDSTKDSGATAQPLPESFGTEHL 1453
                 +D V QH             +  + E +SV+PS S KDSGAT QP P     E L
Sbjct: 1602 PHIGVTDGVMQHTSEINSTVASFPPSAGAPELLSVEPSPSVKDSGATTQPSPTISAAERL 1661

Query: 1452 STSVGD-LLSTEDVLEKYHIVAQNLEDLISKDSKDVEVQGVIDEVPEIILXXXXXXXXXX 1276
               + + LLST D LEKY +VAQ LE  ++KD++D E+QGVI EVPEIIL          
Sbjct: 1662 GGGMSEPLLSTGDALEKYLLVAQKLEAFVAKDARDAEIQGVIAEVPEIILRCISRDEAAL 1721

Query: 1275 XXXXXVFKSLYGNTSNSTHVGAQIAILVALRDVCKVAVKEQLTVLVIYSEDEYKFNKDII 1096
                 VFKSLY N SNS HVGA +AIL A+RDVCK+ VKE LT  VIYS++E KFNK+I 
Sbjct: 1722 AVAQKVFKSLYENASNSVHVGAHLAILAAIRDVCKLVVKE-LTSWVIYSDEERKFNKEIT 1780

Query: 1095 VGLIRSELLNLAEYGMHMAKLIDAGRNTTATEFAISLLQALVTQESGIGVSELHNLIEAL 916
            VGLIRSELLNLAEY +HMAKLID GRN  ATEF+ISLLQ LV QESG+ VSELHNL++AL
Sbjct: 1781 VGLIRSELLNLAEYNVHMAKLIDGGRNKAATEFSISLLQTLVVQESGVSVSELHNLVDAL 1840

Query: 915  AK--LTTRPGSPESLPQLLEIARDVSANTSAPSGYMVSNDEKANQARDRKAPSARPSVSR 742
            AK  L  RPGSPESL QL+EIAR+ ++N++A SG  V  D+KA Q+RD+K PS R S+S 
Sbjct: 1841 AKFQLAMRPGSPESLQQLVEIARNPASNSAALSGLAVGKDDKARQSRDKKVPSGR-SMSG 1899

Query: 741  GDDYNNVESMTADPHGFREQVSILFNEWYRISEAMGTNDVAVTRFVSQLQQSGLLKGDDM 562
             +DYNN ES  ADP GFREQVS+LF EWYRI E  GTND A T ++SQLQQ+GLLK DDM
Sbjct: 1900 REDYNNAES-AADPAGFREQVSVLFAEWYRICELPGTNDAAYTHYISQLQQNGLLKADDM 1958

Query: 561  TDCFFRLLTELSVTHCLSTEVFTPGXXXXXXXXXXXXXSFVAIDMYAKLVILILKYCAVD 382
            +D FFR+LTELSV HCLS+E                  SF+AIDMYAKLV+LI KYC VD
Sbjct: 1959 SDRFFRILTELSVAHCLSSESLQS-------PQQLQHLSFIAIDMYAKLVVLIFKYCVVD 2011

Query: 381  QGSNKLFLLPKILLVTVRVIQKDADEKKTAFNPRPYFRLFVNWLLDLGSPDSVLEGANFQ 202
            QGS+KL LLPKIL VTVRVIQKDA+EKK +FNPRPYFRLF+NWLLDLGSPD +L+G+NFQ
Sbjct: 2012 QGSSKLLLLPKILAVTVRVIQKDAEEKKASFNPRPYFRLFINWLLDLGSPDPLLDGSNFQ 2071

Query: 201  ILTAFANAFHTLQPLKVPGFSFAWLELVSHRSFMPKLLYGNSQKTSLYVQRLLVDLFKFM 22
            +LTAFANAFH LQPLKVPGFSFAWLELVSHRS+MPKLL  N QK   +VQRLLVDLFKF+
Sbjct: 2072 VLTAFANAFHALQPLKVPGFSFAWLELVSHRSYMPKLLTLNLQKGWPFVQRLLVDLFKFL 2131

Query: 21   EPYLRNA 1
            EPYLRNA
Sbjct: 2132 EPYLRNA 2138


>ref|XP_010258904.1| PREDICTED: CCR4-NOT transcription complex subunit 1 isoform X4
            [Nelumbo nucifera]
          Length = 2448

 Score = 1107 bits (2863), Expect = 0.0
 Identities = 615/967 (63%), Positives = 715/967 (73%), Gaps = 41/967 (4%)
 Frame = -1

Query: 2778 EVLLKNLGVEMKDVKPTSLLKDRIRELEGNPDFSNKDVMATKPQIIPEVNPPI-----SV 2614
            EVL KNLGV+MKDVKPTSLLKDR+RE+EGNPDFSNKD+ A++ Q++ EVN  I      V
Sbjct: 1185 EVLFKNLGVDMKDVKPTSLLKDRVREVEGNPDFSNKDIGASQAQMVTEVNSGILSTLGQV 1244

Query: 2613 EPQADVVISSHPG----------------GLLTEDEKMPALTLPERLPSGQGLP-VTPSQ 2485
            E Q +VV  SHPG                G L EDEKM AL+L +RLPSGQGL  V PSQ
Sbjct: 1245 ELQPEVVNPSHPGHSNVLSQYATPLHLASGPLMEDEKMAALSLSDRLPSGQGLSQVAPSQ 1304

Query: 2484 SPFSVSQIPTPIANIGTDVIVNPKISALGLQLQFQRIVPMAMERAIKEIMSPVVQRSVTI 2305
            +PFSVSQ+PTPI NIGT VIVN K+S LGLQL FQRI+P+AMERAIKEI+SP+VQRSVTI
Sbjct: 1305 TPFSVSQLPTPIPNIGTHVIVNQKLSNLGLQLHFQRILPVAMERAIKEIISPIVQRSVTI 1364

Query: 2304 AIQTTKELVLKDYAMESDETRIYNAAHLMVASLAGSLAHVTCKEPLRVSISSHLRNMIQP 2125
            A+QTTKELVLKDYAMESDE+RIYNAAHLMVASLAGSLAHVTCKEPLR SISSHLRN++Q 
Sbjct: 1365 AMQTTKELVLKDYAMESDESRIYNAAHLMVASLAGSLAHVTCKEPLRGSISSHLRNLLQA 1424

Query: 2124 LNVSND-LEQAVQISTNDNLDLGCAVVEKAAIEKALQTIDGEIAGQLAVRRKRRDAVGPA 1948
            L+++++ LEQAVQ+ TNDNLDLGCAV+E+AA EKALQ+IDGEIA QL++RRK R+ VGP 
Sbjct: 1425 LSIASELLEQAVQLVTNDNLDLGCAVIEQAATEKALQSIDGEIAQQLSLRRKHREGVGPT 1484

Query: 1947 YFDATTYTQGPMGGVPEALRPKPGRLSLSQQRV---------------XXNALPAVQNXX 1813
            YFDA+TYTQGPMG VPEALRPKPGRLS SQQRV                 + + A     
Sbjct: 1485 YFDASTYTQGPMGVVPEALRPKPGRLSHSQQRVYEDFVRFPWQNQPSQSSSTIAAGSPVS 1544

Query: 1812 XXXXXXXSLPRSYGLASGQPNPTLYSSTQGDPGFGSVVQPLALASEDMDPASTQILXXXX 1633
                    L R+YG  SGQ +  +YSS QG  GF +V QP+ + SE+MD ASTQ+L    
Sbjct: 1545 SGGSISSGLSRAYGSMSGQLSSGIYSSVQGGQGFSAVGQPMDIISEEMDAASTQLLSASS 1604

Query: 1632 XXXXXSDVVTQHGXXXXXXXXXXXSTIASTEPISVDPSDSTKDSGATAQPLPESFGTEHL 1453
                 +D V QH             +  + E +SV+PS S KDSGAT QP P     E L
Sbjct: 1605 PHIGVTDGVMQHTSEINSTVASFPPSAGAPELLSVEPSPSVKDSGATTQPSPTISAAERL 1664

Query: 1452 STSVGD-LLSTEDVLEKYHIVAQNLEDLISKDSKDVEVQGVIDEVPEIILXXXXXXXXXX 1276
               + + LLST D LEKY +VAQ LE  ++KD++D E+QGVI EVPEIIL          
Sbjct: 1665 GGGMSEPLLSTGDALEKYLLVAQKLEAFVAKDARDAEIQGVIAEVPEIILRCISRDEAAL 1724

Query: 1275 XXXXXVFKSLYGNTSNSTHVGAQIAILVALRDVCKVAVKEQLTVLVIYSEDEYKFNKDII 1096
                 VFKSLY N SNS HVGA +AIL A+RDVCK+ VKE LT  VIYS++E KFNK+I 
Sbjct: 1725 AVAQKVFKSLYENASNSVHVGAHLAILAAIRDVCKLVVKE-LTSWVIYSDEERKFNKEIT 1783

Query: 1095 VGLIRSELLNLAEYGMHMAKLIDAGRNTTATEFAISLLQALVTQESGIGVSELHNLIEAL 916
            VGLIRSELLNLAEY +HMAKLID GRN  ATEF+ISLLQ LV QESG+ VSELHNL++AL
Sbjct: 1784 VGLIRSELLNLAEYNVHMAKLIDGGRNKAATEFSISLLQTLVVQESGVSVSELHNLVDAL 1843

Query: 915  AK--LTTRPGSPESLPQLLEIARDVSANTSAPSGYMVSNDEKANQARDRKAPSARPSVSR 742
            AK  L  RPGSPESL QL+EIAR+ ++N++A SG  V  D+KA Q+RD+K PS R S+S 
Sbjct: 1844 AKFQLAMRPGSPESLQQLVEIARNPASNSAALSGLAVGKDDKARQSRDKKVPSGR-SMSG 1902

Query: 741  GDDYNNVESMTADPHGFREQVSILFNEWYRISEAMGTNDVAVTRFVSQLQQSGLLKGDDM 562
             +DYNN ES  ADP GFREQVS+LF EWYRI E  GTND A T ++SQLQQ+GLLK DDM
Sbjct: 1903 REDYNNAES-AADPAGFREQVSVLFAEWYRICELPGTNDAAYTHYISQLQQNGLLKADDM 1961

Query: 561  TDCFFRLLTELSVTHCLSTEVFTPGXXXXXXXXXXXXXSFVAIDMYAKLVILILKYCAVD 382
            +D FFR+LTELSV HCLS+E                  SF+AIDMYAKLV+LI K     
Sbjct: 1962 SDRFFRILTELSVAHCLSSE-------SLQSPQQLQHLSFIAIDMYAKLVVLIFK----- 2009

Query: 381  QGSNKLFLLPKILLVTVRVIQKDADEKKTAFNPRPYFRLFVNWLLDLGSPDSVLEGANFQ 202
             GS+KL LLPKIL VTVRVIQKDA+EKK +FNPRPYFRLF+NWLLDLGSPD +L+G+NFQ
Sbjct: 2010 -GSSKLLLLPKILAVTVRVIQKDAEEKKASFNPRPYFRLFINWLLDLGSPDPLLDGSNFQ 2068

Query: 201  ILTAFANAFHTLQPLKVPGFSFAWLELVSHRSFMPKLLYGNSQKTSLYVQRLLVDLFKFM 22
            +LTAFANAFH LQPLKVPGFSFAWLELVSHRS+MPKLL  N QK   +VQRLLVDLFKF+
Sbjct: 2069 VLTAFANAFHALQPLKVPGFSFAWLELVSHRSYMPKLLTLNLQKGWPFVQRLLVDLFKFL 2128

Query: 21   EPYLRNA 1
            EPYLRNA
Sbjct: 2129 EPYLRNA 2135


>ref|XP_010662444.1| PREDICTED: CCR4-NOT transcription complex subunit 1-like [Vitis
            vinifera]
          Length = 2457

 Score = 1035 bits (2675), Expect = 0.0
 Identities = 574/967 (59%), Positives = 688/967 (71%), Gaps = 41/967 (4%)
 Frame = -1

Query: 2778 EVLLKNLGVEMKDVKPTSLLKDRIRELEGNPDFSNKDVMATKPQIIPEVNPPI-----SV 2614
            EVL KNLGV+MK+VKPTSLLKDR+RE+EGNPDFSNKDV A++PQ++ ++NP I      V
Sbjct: 1191 EVLFKNLGVDMKEVKPTSLLKDRVREIEGNPDFSNKDVGASQPQMVSDINPGIMSTLSQV 1250

Query: 2613 EPQADVVISSHPGG-----------------LLTEDEKMPALTLPERLPSGQGLP-VTPS 2488
            E Q D+V SSHPGG                  LTED+K+  L+L +RLP+GQGL  V P+
Sbjct: 1251 ELQPDIVNSSHPGGHLNVMTQYPSGLHLASGSLTEDDKIATLSLGDRLPTGQGLSQVPPA 1310

Query: 2487 QSPFSVSQIPTPIANIGTDVIVNPKISALGLQLQFQRIVPMAMERAIKEIMSPVVQRSVT 2308
            QSP+SV QIP PI NIG+ +I N K+ ALGL   FQR+VP+AMERAIK+IM+P+VQRSVT
Sbjct: 1311 QSPYSVGQIPAPIPNIGSHIIFNQKLGALGLHY-FQRVVPIAMERAIKDIMAPIVQRSVT 1369

Query: 2307 IAIQTTKELVLKDYAMESDETRIYNAAHLMVASLAGSLAHVTCKEPLRVSISSHLRNMIQ 2128
            IA QTTKELVLKDYAMESDE+RIYNAAHLMVASLAGSLAHVTCKEPLR +I++ LRN  Q
Sbjct: 1370 IATQTTKELVLKDYAMESDESRIYNAAHLMVASLAGSLAHVTCKEPLRGAITNQLRNSFQ 1429

Query: 2127 PLNVSNDL-EQAVQISTNDNLDLGCAVVEKAAIEKALQTIDGEIAGQLAVRRKRRDAVGP 1951
             LN+  +L EQAV + TNDNLDLGCAV+E AA EKALQTIDGEI  QL++RRK R+ VGP
Sbjct: 1430 GLNIGTELLEQAVPLVTNDNLDLGCAVIENAATEKALQTIDGEITQQLSLRRKHREGVGP 1489

Query: 1950 AYFDATTYTQGPMGGVPEALRPKPGRLSLSQQRVXX---------------NALPAVQNX 1816
             Y+DA+ YTQGPMG +PEALRP+PG LS SQQRV                 NA+PA    
Sbjct: 1490 -YYDASIYTQGPMGVIPEALRPRPGHLSHSQQRVYEDFVRFPWQNQSGQSSNAVPAGPPA 1548

Query: 1815 XXXXXXXXSLPRSYGLASGQPNPTLYSSTQGDPGFGSVVQPLALASEDMDPASTQILXXX 1636
                     L R+Y  +SGQ +P  YS+  G  G  S  QPL L SEDMDP+S Q L   
Sbjct: 1549 AASGPGSSGLSRAYASSSGQLSPGFYSTGTGATGL-SATQPLDLISEDMDPSSAQFLSGS 1607

Query: 1635 XXXXXXSDVVTQHGXXXXXXXXXXXSTIASTEPI-SVDPSDSTKDSGATAQPLPESFGTE 1459
                   D V+ HG            ++A T  + +V+ S+  K+ GA A  LP +  TE
Sbjct: 1608 SSRIGVMDGVSPHGSKLNSVSFP---SVAPTPEVHAVEASNVGKELGAAALSLPAASTTE 1664

Query: 1458 HLSTSVGD-LLSTEDVLEKYHIVAQNLEDLISKDSKDVEVQGVIDEVPEIILXXXXXXXX 1282
            H  + + + LL+T D L+KY IVAQ LE L++KDS D E+QGVI ++PEIIL        
Sbjct: 1665 HPGSGISEPLLNTGDALDKYQIVAQKLETLLTKDSGDAEIQGVIAQIPEIILKCIRRDEA 1724

Query: 1281 XXXXXXXVFKSLYGNTSNSTHVGAQIAILVALRDVCKVAVKEQLTVLVIYSEDEYKFNKD 1102
                   VFKSLY N SN+ HV A +AIL  +RDVCK+ VKE LT  VIYS++E KFN D
Sbjct: 1725 ALAVAQKVFKSLYENASNNLHVSAHLAILATIRDVCKLVVKE-LTSWVIYSDEERKFNTD 1783

Query: 1101 IIVGLIRSELLNLAEYGMHMAKLIDAGRNTTATEFAISLLQALVTQESGIGVSELHNLIE 922
            I VGLI  +LLNLAEY MHMAKLIDAGRN  ATEFAISLLQ L+ Q+S + VSEL NL++
Sbjct: 1784 ITVGLIHKDLLNLAEYNMHMAKLIDAGRNKAATEFAISLLQTLLIQDSRVSVSELPNLVD 1843

Query: 921  ALAKLTTRPGSPESLPQLLEIARDVSANTSAPSGYMVSNDEKANQARDRKAPSARPSVSR 742
            AL KL  RPGSPESL QL+EIAR+ +AN +  SG  V  D+K  Q+R++K+ S R   SR
Sbjct: 1844 ALGKLAMRPGSPESLQQLVEIARNPAANAAILSGLNVGKDDKEKQSREKKS-SDRSMTSR 1902

Query: 741  GDDYNNVESMTADPHGFREQVSILFNEWYRISEAMGTNDVAVTRFVSQLQQSGLLKGDDM 562
             +DY N +S+  DP GFR+QVS+LF +WY+I E  GTND A+T F+SQLQQSG L GDD 
Sbjct: 1903 -EDYTNADSVGVDPVGFRDQVSVLFADWYQIYELHGTNDPAITHFISQLQQSGFLNGDDT 1961

Query: 561  TDCFFRLLTELSVTHCLSTEVFTPGXXXXXXXXXXXXXSFVAIDMYAKLVILILKYCAVD 382
            +D FFRLLTEL+V HCLS+E    G             SF+AID+YAKLVILILK+C ++
Sbjct: 1962 SDRFFRLLTELAVAHCLSSEGINSGSLSLHSPQTGQNMSFLAIDVYAKLVILILKFCVME 2021

Query: 381  QGSNKLFLLPKILLVTVRVIQKDADEKKTAFNPRPYFRLFVNWLLDLGSPDSVLEGANFQ 202
             G +KL LLPKI  VTVRVIQ+D++EKK +FNPRPYFRLF+NWL DL SPD +L+GANFQ
Sbjct: 2022 HGPSKLLLLPKIFSVTVRVIQRDSEEKKASFNPRPYFRLFINWLFDLVSPDPILDGANFQ 2081

Query: 201  ILTAFANAFHTLQPLKVPGFSFAWLELVSHRSFMPKLLYGNSQKTSLYVQRLLVDLFKFM 22
            +L AFANAFH LQPLK+P FSFAWLELVSHRSFMPKLL  N  K  LYVQRLLVDLFKFM
Sbjct: 2082 VLIAFANAFHALQPLKIPAFSFAWLELVSHRSFMPKLLTVNPPKGWLYVQRLLVDLFKFM 2141

Query: 21   EPYLRNA 1
            EPYLRNA
Sbjct: 2142 EPYLRNA 2148


>gb|KJB49218.1| hypothetical protein B456_008G107100 [Gossypium raimondii]
          Length = 2290

 Score =  997 bits (2578), Expect = 0.0
 Identities = 559/963 (58%), Positives = 683/963 (70%), Gaps = 37/963 (3%)
 Frame = -1

Query: 2778 EVLLKNLGVEMKDVKPTSLLKDRIRELEGNPDFSNKDVMATKPQIIPE-----VNPPISV 2614
            EVL KNLGV+MKD+ PTSLLKDR RELEGNPDFSNKDV A++PQ++PE     ++P   V
Sbjct: 1155 EVLFKNLGVDMKDITPTSLLKDRKRELEGNPDFSNKDVGASQPQMVPEAKTGIISPLNHV 1214

Query: 2613 EPQADVVISSHPGG-----------------LLTEDEKMPALTLPERLPSGQGL-PVTPS 2488
            +   +V    +PGG                  L EDEK+ AL L ++LPS QGL   +PS
Sbjct: 1215 DIPLEVASPPNPGGHTHLLSQYAGPLRLSSGALVEDEKLAALGLSDQLPSAQGLFQASPS 1274

Query: 2487 QSPFSVSQIPTPIANIGTDVIVNPKISALGLQLQFQRIVPMAMERAIKEIMSPVVQRSVT 2308
            QSPFSVSQ+ TPI NIGT VI+N K+SALGL L FQR+VP+AM+RAIKEI++ +VQRSV+
Sbjct: 1275 QSPFSVSQLSTPIPNIGTHVIINQKLSALGLHLHFQRVVPIAMDRAIKEIVAGIVQRSVS 1334

Query: 2307 IAIQTTKELVLKDYAMESDETRIYNAAHLMVASLAGSLAHVTCKEPLRVSISSHLRNMIQ 2128
            IA QTTKELVLKDYAMESDETRIYNAAHLMVASLAGSLAHVTCKEPLR SISS LR+ +Q
Sbjct: 1335 IATQTTKELVLKDYAMESDETRIYNAAHLMVASLAGSLAHVTCKEPLRGSISSQLRSSLQ 1394

Query: 2127 PLNVSNDL-EQAVQISTNDNLDLGCAVVEKAAIEKALQTIDGEIAGQLAVRRKRRDAVGP 1951
             LNV +DL EQAVQ+ TNDNLDLGCAV+E+AA +KA+QTIDGEIA QLA+RRK RD   P
Sbjct: 1395 GLNVGSDLLEQAVQLVTNDNLDLGCAVIEQAATDKAIQTIDGEIANQLALRRKHRD---P 1451

Query: 1950 AYFDATTYTQGPMGGVPEALRPKPGRLSLSQQRVXXN--ALP----------AVQNXXXX 1807
            A+FD + Y QG MG VPEALRPKPG L++SQQRV  +   LP           +      
Sbjct: 1452 AFFDPSMYGQGSMGVVPEALRPKPGHLTVSQQRVYEDFVRLPWQNQSGQTTHTMSAGPST 1511

Query: 1806 XXXXXSLPRSYGLASGQPNPTLYSSTQGDPGFGSVVQPLALASEDMDPASTQILXXXXXX 1627
                  L  ++G  SGQ  P  Y+S  G+ G   V      ASE ++  S  +L      
Sbjct: 1512 SPGDTGLTGTFGSTSGQVTPG-YTSGPGNLGQADV------ASEAIETTSASLLSVPSVH 1564

Query: 1626 XXXSDVVTQHGXXXXXXXXXXXSTIASTEPISVDPSDSTKDSGATAQPLPESFGTEHLST 1447
                  +TQ             ST A+ E +SV+ +D+ K+ G T+Q LP    TE L +
Sbjct: 1565 IGSGTGLTQQTTENDPLNASFPSTTAAPELLSVETTDAVKEFGPTSQSLPSPAATERLGS 1624

Query: 1446 SVGDL-LSTEDVLEKYHIVAQNLEDLISKDSKDVEVQGVIDEVPEIILXXXXXXXXXXXX 1270
            S+ +  LST D L+KY IVAQ LE+L++ D ++ ++QGVI EVPEIIL            
Sbjct: 1625 SISETSLSTRDALDKYQIVAQKLENLVTSDGREADIQGVISEVPEIILRCVSRDEAALAV 1684

Query: 1269 XXXVFKSLYGNTSNSTHVGAQIAILVALRDVCKVAVKEQLTVLVIYSEDEYKFNKDIIVG 1090
               VFK LY N SNS HV A +AIL A+RDVCK+AVKE LT  VIYSEDE KFNKDI VG
Sbjct: 1685 AQKVFKGLYENASNSLHVSAHLAILAAVRDVCKLAVKE-LTSWVIYSEDERKFNKDITVG 1743

Query: 1089 LIRSELLNLAEYGMHMAKLIDAGRNTTATEFAISLLQALVTQESGIGVSELHNLIEALAK 910
            LIRSELLNLAEY +HMAK ID GRN  ATEFA+SLLQ LV+ ES + +SELHNL++ALAK
Sbjct: 1744 LIRSELLNLAEYNVHMAKYIDGGRNKAATEFAVSLLQTLVSDESRV-ISELHNLVDALAK 1802

Query: 909  LTTRPGSPESLPQLLEIARDVSANTSAPSGYMVSNDEKANQARDRKAPSARPSVSRGDDY 730
            + ++PG+PESL QL+E+ R+ SA+ +A S   V+ ++KA Q+RD+K PS  P+    +D 
Sbjct: 1803 VASKPGAPESLQQLIEMIRNPSASMAALSSATVAKEDKAKQSRDKKGPSHAPA--NREDN 1860

Query: 729  NNVESMTADPHGFREQVSILFNEWYRISEAMGTNDVAVTRFVSQLQQSGLLKGDDMTDCF 550
            +++E++  DP GF+EQVS+LF EWY+I E  G ND     ++ QL Q+GLLKGDDMT+ F
Sbjct: 1861 SSMEALEPDPAGFKEQVSMLFAEWYQICELPGANDGPCNHYILQLYQNGLLKGDDMTERF 1920

Query: 549  FRLLTELSVTHCLSTEVFTPGXXXXXXXXXXXXXSFVAIDMYAKLVILILKYCAVDQGSN 370
            FR++TELSV HCLS+EV + G              F+AID+YAKLV+ ILKYC V+QGS+
Sbjct: 1921 FRIITELSVAHCLSSEVMSSGALQSPQQAQTLS--FLAIDIYAKLVLAILKYCPVEQGSS 1978

Query: 369  KLFLLPKILLVTVRVIQKDADEKKTAFNPRPYFRLFVNWLLDLGSPDSVLEGANFQILTA 190
            KLFL+ KIL VTVR IQKDA++KK +FNPRPYFRLF+NWLLDLGS D V +GANFQILTA
Sbjct: 1979 KLFLMSKILTVTVRFIQKDAEDKKASFNPRPYFRLFINWLLDLGSLDPVTDGANFQILTA 2038

Query: 189  FANAFHTLQPLKVPGFSFAWLELVSHRSFMPKLLYGNSQKTSLYVQRLLVDLFKFMEPYL 10
            FANAFH LQPLKVP F FAWLELVSHR+FMPKLL GNSQK   Y+QRLLVDL +F+EP+L
Sbjct: 2039 FANAFHALQPLKVPSFCFAWLELVSHRTFMPKLLTGNSQKGWPYIQRLLVDLLQFLEPFL 2098

Query: 9    RNA 1
            RNA
Sbjct: 2099 RNA 2101


>gb|KJB49217.1| hypothetical protein B456_008G107100 [Gossypium raimondii]
          Length = 2411

 Score =  997 bits (2578), Expect = 0.0
 Identities = 559/963 (58%), Positives = 683/963 (70%), Gaps = 37/963 (3%)
 Frame = -1

Query: 2778 EVLLKNLGVEMKDVKPTSLLKDRIRELEGNPDFSNKDVMATKPQIIPE-----VNPPISV 2614
            EVL KNLGV+MKD+ PTSLLKDR RELEGNPDFSNKDV A++PQ++PE     ++P   V
Sbjct: 1155 EVLFKNLGVDMKDITPTSLLKDRKRELEGNPDFSNKDVGASQPQMVPEAKTGIISPLNHV 1214

Query: 2613 EPQADVVISSHPGG-----------------LLTEDEKMPALTLPERLPSGQGL-PVTPS 2488
            +   +V    +PGG                  L EDEK+ AL L ++LPS QGL   +PS
Sbjct: 1215 DIPLEVASPPNPGGHTHLLSQYAGPLRLSSGALVEDEKLAALGLSDQLPSAQGLFQASPS 1274

Query: 2487 QSPFSVSQIPTPIANIGTDVIVNPKISALGLQLQFQRIVPMAMERAIKEIMSPVVQRSVT 2308
            QSPFSVSQ+ TPI NIGT VI+N K+SALGL L FQR+VP+AM+RAIKEI++ +VQRSV+
Sbjct: 1275 QSPFSVSQLSTPIPNIGTHVIINQKLSALGLHLHFQRVVPIAMDRAIKEIVAGIVQRSVS 1334

Query: 2307 IAIQTTKELVLKDYAMESDETRIYNAAHLMVASLAGSLAHVTCKEPLRVSISSHLRNMIQ 2128
            IA QTTKELVLKDYAMESDETRIYNAAHLMVASLAGSLAHVTCKEPLR SISS LR+ +Q
Sbjct: 1335 IATQTTKELVLKDYAMESDETRIYNAAHLMVASLAGSLAHVTCKEPLRGSISSQLRSSLQ 1394

Query: 2127 PLNVSNDL-EQAVQISTNDNLDLGCAVVEKAAIEKALQTIDGEIAGQLAVRRKRRDAVGP 1951
             LNV +DL EQAVQ+ TNDNLDLGCAV+E+AA +KA+QTIDGEIA QLA+RRK RD   P
Sbjct: 1395 GLNVGSDLLEQAVQLVTNDNLDLGCAVIEQAATDKAIQTIDGEIANQLALRRKHRD---P 1451

Query: 1950 AYFDATTYTQGPMGGVPEALRPKPGRLSLSQQRVXXN--ALP----------AVQNXXXX 1807
            A+FD + Y QG MG VPEALRPKPG L++SQQRV  +   LP           +      
Sbjct: 1452 AFFDPSMYGQGSMGVVPEALRPKPGHLTVSQQRVYEDFVRLPWQNQSGQTTHTMSAGPST 1511

Query: 1806 XXXXXSLPRSYGLASGQPNPTLYSSTQGDPGFGSVVQPLALASEDMDPASTQILXXXXXX 1627
                  L  ++G  SGQ  P  Y+S  G+ G   V      ASE ++  S  +L      
Sbjct: 1512 SPGDTGLTGTFGSTSGQVTPG-YTSGPGNLGQADV------ASEAIETTSASLLSVPSVH 1564

Query: 1626 XXXSDVVTQHGXXXXXXXXXXXSTIASTEPISVDPSDSTKDSGATAQPLPESFGTEHLST 1447
                  +TQ             ST A+ E +SV+ +D+ K+ G T+Q LP    TE L +
Sbjct: 1565 IGSGTGLTQQTTENDPLNASFPSTTAAPELLSVETTDAVKEFGPTSQSLPSPAATERLGS 1624

Query: 1446 SVGDL-LSTEDVLEKYHIVAQNLEDLISKDSKDVEVQGVIDEVPEIILXXXXXXXXXXXX 1270
            S+ +  LST D L+KY IVAQ LE+L++ D ++ ++QGVI EVPEIIL            
Sbjct: 1625 SISETSLSTRDALDKYQIVAQKLENLVTSDGREADIQGVISEVPEIILRCVSRDEAALAV 1684

Query: 1269 XXXVFKSLYGNTSNSTHVGAQIAILVALRDVCKVAVKEQLTVLVIYSEDEYKFNKDIIVG 1090
               VFK LY N SNS HV A +AIL A+RDVCK+AVKE LT  VIYSEDE KFNKDI VG
Sbjct: 1685 AQKVFKGLYENASNSLHVSAHLAILAAVRDVCKLAVKE-LTSWVIYSEDERKFNKDITVG 1743

Query: 1089 LIRSELLNLAEYGMHMAKLIDAGRNTTATEFAISLLQALVTQESGIGVSELHNLIEALAK 910
            LIRSELLNLAEY +HMAK ID GRN  ATEFA+SLLQ LV+ ES + +SELHNL++ALAK
Sbjct: 1744 LIRSELLNLAEYNVHMAKYIDGGRNKAATEFAVSLLQTLVSDESRV-ISELHNLVDALAK 1802

Query: 909  LTTRPGSPESLPQLLEIARDVSANTSAPSGYMVSNDEKANQARDRKAPSARPSVSRGDDY 730
            + ++PG+PESL QL+E+ R+ SA+ +A S   V+ ++KA Q+RD+K PS  P+    +D 
Sbjct: 1803 VASKPGAPESLQQLIEMIRNPSASMAALSSATVAKEDKAKQSRDKKGPSHAPA--NREDN 1860

Query: 729  NNVESMTADPHGFREQVSILFNEWYRISEAMGTNDVAVTRFVSQLQQSGLLKGDDMTDCF 550
            +++E++  DP GF+EQVS+LF EWY+I E  G ND     ++ QL Q+GLLKGDDMT+ F
Sbjct: 1861 SSMEALEPDPAGFKEQVSMLFAEWYQICELPGANDGPCNHYILQLYQNGLLKGDDMTERF 1920

Query: 549  FRLLTELSVTHCLSTEVFTPGXXXXXXXXXXXXXSFVAIDMYAKLVILILKYCAVDQGSN 370
            FR++TELSV HCLS+EV + G              F+AID+YAKLV+ ILKYC V+QGS+
Sbjct: 1921 FRIITELSVAHCLSSEVMSSGALQSPQQAQTLS--FLAIDIYAKLVLAILKYCPVEQGSS 1978

Query: 369  KLFLLPKILLVTVRVIQKDADEKKTAFNPRPYFRLFVNWLLDLGSPDSVLEGANFQILTA 190
            KLFL+ KIL VTVR IQKDA++KK +FNPRPYFRLF+NWLLDLGS D V +GANFQILTA
Sbjct: 1979 KLFLMSKILTVTVRFIQKDAEDKKASFNPRPYFRLFINWLLDLGSLDPVTDGANFQILTA 2038

Query: 189  FANAFHTLQPLKVPGFSFAWLELVSHRSFMPKLLYGNSQKTSLYVQRLLVDLFKFMEPYL 10
            FANAFH LQPLKVP F FAWLELVSHR+FMPKLL GNSQK   Y+QRLLVDL +F+EP+L
Sbjct: 2039 FANAFHALQPLKVPSFCFAWLELVSHRTFMPKLLTGNSQKGWPYIQRLLVDLLQFLEPFL 2098

Query: 9    RNA 1
            RNA
Sbjct: 2099 RNA 2101


>ref|XP_012437512.1| PREDICTED: CCR4-NOT transcription complex subunit 1-like [Gossypium
            raimondii] gi|763782145|gb|KJB49216.1| hypothetical
            protein B456_008G107100 [Gossypium raimondii]
          Length = 2413

 Score =  997 bits (2578), Expect = 0.0
 Identities = 559/963 (58%), Positives = 683/963 (70%), Gaps = 37/963 (3%)
 Frame = -1

Query: 2778 EVLLKNLGVEMKDVKPTSLLKDRIRELEGNPDFSNKDVMATKPQIIPE-----VNPPISV 2614
            EVL KNLGV+MKD+ PTSLLKDR RELEGNPDFSNKDV A++PQ++PE     ++P   V
Sbjct: 1155 EVLFKNLGVDMKDITPTSLLKDRKRELEGNPDFSNKDVGASQPQMVPEAKTGIISPLNHV 1214

Query: 2613 EPQADVVISSHPGG-----------------LLTEDEKMPALTLPERLPSGQGL-PVTPS 2488
            +   +V    +PGG                  L EDEK+ AL L ++LPS QGL   +PS
Sbjct: 1215 DIPLEVASPPNPGGHTHLLSQYAGPLRLSSGALVEDEKLAALGLSDQLPSAQGLFQASPS 1274

Query: 2487 QSPFSVSQIPTPIANIGTDVIVNPKISALGLQLQFQRIVPMAMERAIKEIMSPVVQRSVT 2308
            QSPFSVSQ+ TPI NIGT VI+N K+SALGL L FQR+VP+AM+RAIKEI++ +VQRSV+
Sbjct: 1275 QSPFSVSQLSTPIPNIGTHVIINQKLSALGLHLHFQRVVPIAMDRAIKEIVAGIVQRSVS 1334

Query: 2307 IAIQTTKELVLKDYAMESDETRIYNAAHLMVASLAGSLAHVTCKEPLRVSISSHLRNMIQ 2128
            IA QTTKELVLKDYAMESDETRIYNAAHLMVASLAGSLAHVTCKEPLR SISS LR+ +Q
Sbjct: 1335 IATQTTKELVLKDYAMESDETRIYNAAHLMVASLAGSLAHVTCKEPLRGSISSQLRSSLQ 1394

Query: 2127 PLNVSNDL-EQAVQISTNDNLDLGCAVVEKAAIEKALQTIDGEIAGQLAVRRKRRDAVGP 1951
             LNV +DL EQAVQ+ TNDNLDLGCAV+E+AA +KA+QTIDGEIA QLA+RRK RD   P
Sbjct: 1395 GLNVGSDLLEQAVQLVTNDNLDLGCAVIEQAATDKAIQTIDGEIANQLALRRKHRD---P 1451

Query: 1950 AYFDATTYTQGPMGGVPEALRPKPGRLSLSQQRVXXN--ALP----------AVQNXXXX 1807
            A+FD + Y QG MG VPEALRPKPG L++SQQRV  +   LP           +      
Sbjct: 1452 AFFDPSMYGQGSMGVVPEALRPKPGHLTVSQQRVYEDFVRLPWQNQSGQTTHTMSAGPST 1511

Query: 1806 XXXXXSLPRSYGLASGQPNPTLYSSTQGDPGFGSVVQPLALASEDMDPASTQILXXXXXX 1627
                  L  ++G  SGQ  P  Y+S  G+ G   V      ASE ++  S  +L      
Sbjct: 1512 SPGDTGLTGTFGSTSGQVTPG-YTSGPGNLGQADV------ASEAIETTSASLLSVPSVH 1564

Query: 1626 XXXSDVVTQHGXXXXXXXXXXXSTIASTEPISVDPSDSTKDSGATAQPLPESFGTEHLST 1447
                  +TQ             ST A+ E +SV+ +D+ K+ G T+Q LP    TE L +
Sbjct: 1565 IGSGTGLTQQTTENDPLNASFPSTTAAPELLSVETTDAVKEFGPTSQSLPSPAATERLGS 1624

Query: 1446 SVGDL-LSTEDVLEKYHIVAQNLEDLISKDSKDVEVQGVIDEVPEIILXXXXXXXXXXXX 1270
            S+ +  LST D L+KY IVAQ LE+L++ D ++ ++QGVI EVPEIIL            
Sbjct: 1625 SISETSLSTRDALDKYQIVAQKLENLVTSDGREADIQGVISEVPEIILRCVSRDEAALAV 1684

Query: 1269 XXXVFKSLYGNTSNSTHVGAQIAILVALRDVCKVAVKEQLTVLVIYSEDEYKFNKDIIVG 1090
               VFK LY N SNS HV A +AIL A+RDVCK+AVKE LT  VIYSEDE KFNKDI VG
Sbjct: 1685 AQKVFKGLYENASNSLHVSAHLAILAAVRDVCKLAVKE-LTSWVIYSEDERKFNKDITVG 1743

Query: 1089 LIRSELLNLAEYGMHMAKLIDAGRNTTATEFAISLLQALVTQESGIGVSELHNLIEALAK 910
            LIRSELLNLAEY +HMAK ID GRN  ATEFA+SLLQ LV+ ES + +SELHNL++ALAK
Sbjct: 1744 LIRSELLNLAEYNVHMAKYIDGGRNKAATEFAVSLLQTLVSDESRV-ISELHNLVDALAK 1802

Query: 909  LTTRPGSPESLPQLLEIARDVSANTSAPSGYMVSNDEKANQARDRKAPSARPSVSRGDDY 730
            + ++PG+PESL QL+E+ R+ SA+ +A S   V+ ++KA Q+RD+K PS  P+    +D 
Sbjct: 1803 VASKPGAPESLQQLIEMIRNPSASMAALSSATVAKEDKAKQSRDKKGPSHAPA--NREDN 1860

Query: 729  NNVESMTADPHGFREQVSILFNEWYRISEAMGTNDVAVTRFVSQLQQSGLLKGDDMTDCF 550
            +++E++  DP GF+EQVS+LF EWY+I E  G ND     ++ QL Q+GLLKGDDMT+ F
Sbjct: 1861 SSMEALEPDPAGFKEQVSMLFAEWYQICELPGANDGPCNHYILQLYQNGLLKGDDMTERF 1920

Query: 549  FRLLTELSVTHCLSTEVFTPGXXXXXXXXXXXXXSFVAIDMYAKLVILILKYCAVDQGSN 370
            FR++TELSV HCLS+EV + G              F+AID+YAKLV+ ILKYC V+QGS+
Sbjct: 1921 FRIITELSVAHCLSSEVMSSGALQSPQQAQTLS--FLAIDIYAKLVLAILKYCPVEQGSS 1978

Query: 369  KLFLLPKILLVTVRVIQKDADEKKTAFNPRPYFRLFVNWLLDLGSPDSVLEGANFQILTA 190
            KLFL+ KIL VTVR IQKDA++KK +FNPRPYFRLF+NWLLDLGS D V +GANFQILTA
Sbjct: 1979 KLFLMSKILTVTVRFIQKDAEDKKASFNPRPYFRLFINWLLDLGSLDPVTDGANFQILTA 2038

Query: 189  FANAFHTLQPLKVPGFSFAWLELVSHRSFMPKLLYGNSQKTSLYVQRLLVDLFKFMEPYL 10
            FANAFH LQPLKVP F FAWLELVSHR+FMPKLL GNSQK   Y+QRLLVDL +F+EP+L
Sbjct: 2039 FANAFHALQPLKVPSFCFAWLELVSHRTFMPKLLTGNSQKGWPYIQRLLVDLLQFLEPFL 2098

Query: 9    RNA 1
            RNA
Sbjct: 2099 RNA 2101


>gb|KJB49219.1| hypothetical protein B456_008G107100 [Gossypium raimondii]
          Length = 2412

 Score =  995 bits (2572), Expect = 0.0
 Identities = 560/963 (58%), Positives = 684/963 (71%), Gaps = 37/963 (3%)
 Frame = -1

Query: 2778 EVLLKNLGVEMKDVKPTSLLKDRIRELEGNPDFSNKDVMATKPQIIPE-----VNPPISV 2614
            EVL KNLGV+MKD+ PTSLLKDR RELEGNPDFSNKDV A++PQ++PE     ++P   V
Sbjct: 1155 EVLFKNLGVDMKDITPTSLLKDRKRELEGNPDFSNKDVGASQPQMVPEAKTGIISPLNHV 1214

Query: 2613 EPQADVVISSHPGG-----------------LLTEDEKMPALTLPERLPSGQGL-PVTPS 2488
            +   +V    +PGG                  L EDEK+ AL L ++LPS QGL   +PS
Sbjct: 1215 DIPLEVASPPNPGGHTHLLSQYAGPLRLSSGALVEDEKLAALGLSDQLPSAQGLFQASPS 1274

Query: 2487 QSPFSVSQIPTPIANIGTDVIVNPKISALGLQLQFQRIVPMAMERAIKEIMSPVVQRSVT 2308
            QSPFSVSQ+ TPI NIGT VI+N K+SALGL L FQR+VP+AM+RAIKEI++ +VQRSV+
Sbjct: 1275 QSPFSVSQLSTPIPNIGTHVIINQKLSALGLHLHFQRVVPIAMDRAIKEIVAGIVQRSVS 1334

Query: 2307 IAIQTTKELVLKDYAMESDETRIYNAAHLMVASLAGSLAHVTCKEPLRVSISSHLRNMIQ 2128
            IA QTTKELVLKDYAMESDETRIYNAAHLMVASLAGSLAHVTCKEPLR SISS LR+ +Q
Sbjct: 1335 IATQTTKELVLKDYAMESDETRIYNAAHLMVASLAGSLAHVTCKEPLRGSISSQLRSSLQ 1394

Query: 2127 PLNVSNDL-EQAVQISTNDNLDLGCAVVEKAAIEKALQTIDGEIAGQLAVRRKRRDAVGP 1951
             LNV +DL EQAVQ+ TNDNLDLGCAV+E+AA +KA+QTIDGEIA QLA+RRK RD   P
Sbjct: 1395 GLNVGSDLLEQAVQLVTNDNLDLGCAVIEQAATDKAIQTIDGEIANQLALRRKHRD---P 1451

Query: 1950 AYFDATTYTQGPMGGVPEALRPKPGRLSLSQQRVXXN--ALP----------AVQNXXXX 1807
            A+FD + Y QG MG VPEALRPKPG L++SQQRV  +   LP           +      
Sbjct: 1452 AFFDPSMYGQGSMGVVPEALRPKPGHLTVSQQRVYEDFVRLPWQNQSGQTTHTMSAGPST 1511

Query: 1806 XXXXXSLPRSYGLASGQPNPTLYSSTQGDPGFGSVVQPLALASEDMDPASTQILXXXXXX 1627
                  L  ++G  SGQ  P  Y+S  G+ G   V      ASE ++  S  +L      
Sbjct: 1512 SPGDTGLTGTFGSTSGQVTPG-YTSGPGNLGQADV------ASEAIETTSASLLSVPSVH 1564

Query: 1626 XXXSDVVTQHGXXXXXXXXXXXSTIASTEPISVDPSDSTKDSGATAQPLPESFGTEHLST 1447
                  +TQ             ST A+ E +SV+ +D+ K+ G T+Q LP    TE L +
Sbjct: 1565 IGSGTGLTQQTTENDPLNASFPSTTAAPELLSVETTDAVKEFGPTSQSLPSPAATERLGS 1624

Query: 1446 SVGDL-LSTEDVLEKYHIVAQNLEDLISKDSKDVEVQGVIDEVPEIILXXXXXXXXXXXX 1270
            S+ +  LST D L+KY IVAQ LE+L++ D ++ ++QGVI EVPEIIL            
Sbjct: 1625 SISETSLSTRDALDKYQIVAQKLENLVTSDGREADIQGVISEVPEIILRCVSRDEAALAV 1684

Query: 1269 XXXVFKSLYGNTSNSTHVGAQIAILVALRDVCKVAVKEQLTVLVIYSEDEYKFNKDIIVG 1090
               VFK LY N SNS HV A +AIL A+RDVCK+AVKE LT  VIYSEDE KFNKDI VG
Sbjct: 1685 AQKVFKGLYENASNSLHVSAHLAILAAVRDVCKLAVKE-LTSWVIYSEDERKFNKDITVG 1743

Query: 1089 LIRSELLNLAEYGMHMAKLIDAGRNTTATEFAISLLQALVTQESGIGVSELHNLIEALAK 910
            LIRSELLNLAEY +HMAK ID GRNT ATEFA+SLLQ LV+ ES + +SELHNL++ALAK
Sbjct: 1744 LIRSELLNLAEYNVHMAKYIDGGRNT-ATEFAVSLLQTLVSDESRV-ISELHNLVDALAK 1801

Query: 909  LTTRPGSPESLPQLLEIARDVSANTSAPSGYMVSNDEKANQARDRKAPSARPSVSRGDDY 730
            + ++PG+PESL QL+E+ R+ SA+ +A S   V+ ++KA Q+RD+K PS  P+    +D 
Sbjct: 1802 VASKPGAPESLQQLIEMIRNPSASMAALSSATVAKEDKAKQSRDKKGPSHAPA--NREDN 1859

Query: 729  NNVESMTADPHGFREQVSILFNEWYRISEAMGTNDVAVTRFVSQLQQSGLLKGDDMTDCF 550
            +++E++  DP GF+EQVS+LF EWY+I E  G ND     ++ QL Q+GLLKGDDMT+ F
Sbjct: 1860 SSMEALEPDPAGFKEQVSMLFAEWYQICELPGANDGPCNHYILQLYQNGLLKGDDMTERF 1919

Query: 549  FRLLTELSVTHCLSTEVFTPGXXXXXXXXXXXXXSFVAIDMYAKLVILILKYCAVDQGSN 370
            FR++TELSV HCLS+EV + G              F+AID+YAKLV+ ILKYC V+QGS+
Sbjct: 1920 FRIITELSVAHCLSSEVMSSGALQSPQQAQTLS--FLAIDIYAKLVLAILKYCPVEQGSS 1977

Query: 369  KLFLLPKILLVTVRVIQKDADEKKTAFNPRPYFRLFVNWLLDLGSPDSVLEGANFQILTA 190
            KLFL+ KIL VTVR IQKDA++KK +FNPRPYFRLF+NWLLDLGS D V +GANFQILTA
Sbjct: 1978 KLFLMSKILTVTVRFIQKDAEDKKASFNPRPYFRLFINWLLDLGSLDPVTDGANFQILTA 2037

Query: 189  FANAFHTLQPLKVPGFSFAWLELVSHRSFMPKLLYGNSQKTSLYVQRLLVDLFKFMEPYL 10
            FANAFH LQPLKVP F FAWLELVSHR+FMPKLL GNSQK   Y+QRLLVDL +F+EP+L
Sbjct: 2038 FANAFHALQPLKVPSFCFAWLELVSHRTFMPKLLTGNSQKGWPYIQRLLVDLLQFLEPFL 2097

Query: 9    RNA 1
            RNA
Sbjct: 2098 RNA 2100


>ref|XP_006445336.1| hypothetical protein CICLE_v10018430mg [Citrus clementina]
            gi|557547598|gb|ESR58576.1| hypothetical protein
            CICLE_v10018430mg [Citrus clementina]
          Length = 2362

 Score =  994 bits (2569), Expect = 0.0
 Identities = 557/963 (57%), Positives = 678/963 (70%), Gaps = 37/963 (3%)
 Frame = -1

Query: 2778 EVLLKNLGVEMKDVKPTSLLKDRIRELEGNPDFSNKDVMATKPQIIPEVNPPI-----SV 2614
            EVL KNLGV+MKD+ PTSLLKDR RE+EGNPDFSNKDV A++PQ++PEV P I      V
Sbjct: 1157 EVLFKNLGVDMKDITPTSLLKDRKREIEGNPDFSNKDVGASQPQLVPEVKPAIVSPLGHV 1216

Query: 2613 EPQADVVISSHPGG-----------------LLTEDEKMPALTLPERLPSGQGL-PVTPS 2488
            +   DV    + GG                  L EDEK+ AL + ++LPS QGL   + S
Sbjct: 1217 DLPLDVASPPNSGGPTHLLSQYAAPLRLSSGTLMEDEKLAALGISDQLPSAQGLFQASQS 1276

Query: 2487 QSPFSVSQIPTPIANIGTDVIVNPKISALGLQLQFQRIVPMAMERAIKEIMSPVVQRSVT 2308
            QSPFSVSQ+ TPI NIGT VI+N K++ALGL L FQR+VP+AM+RAIKEI+S +VQRSV+
Sbjct: 1277 QSPFSVSQLSTPIPNIGTHVIINQKLTALGLHLHFQRVVPIAMDRAIKEIVSGIVQRSVS 1336

Query: 2307 IAIQTTKELVLKDYAMESDETRIYNAAHLMVASLAGSLAHVTCKEPLRVSISSHLRNMIQ 2128
            IA QTTKELVLKDYAMESDETRIYNAAHLMVASLAGSLAHVTCKEPLR SISS LRN +Q
Sbjct: 1337 IATQTTKELVLKDYAMESDETRIYNAAHLMVASLAGSLAHVTCKEPLRGSISSQLRNSLQ 1396

Query: 2127 PLNVSNDL-EQAVQISTNDNLDLGCAVVEKAAIEKALQTIDGEIAGQLAVRRKRRDAVGP 1951
             L ++++L EQAVQ+ TNDNLDLGCAV+E+AA +KA+QTIDGEIA QL++RRK R+ VG 
Sbjct: 1397 GLTIASELLEQAVQLVTNDNLDLGCAVIEQAATDKAIQTIDGEIAQQLSLRRKHREGVGS 1456

Query: 1950 AYFDATTYTQGPMGGVPEALRPKPGRLSLSQQRVXXN--ALP----------AVQNXXXX 1807
            ++FD   Y QG MG VPEALRPKPG LS+SQQRV  +   LP          A+      
Sbjct: 1457 SFFDPNIYAQGSMG-VPEALRPKPGHLSVSQQRVYEDFVRLPWQNQSSQGSHAMSAGSLT 1515

Query: 1806 XXXXXSLPRSYGLASGQPNPTLYSSTQGDPGFGSVVQPLALASEDMDPASTQILXXXXXX 1627
                 +   +YGLA GQ N   YSS+ G  GF +V +P  +AS   +  S   L      
Sbjct: 1516 SSGDAAQASAYGLAGGQGNQG-YSSSAGSTGFDAVSRPSDVASGTTESTSAGFLSTSLVH 1574

Query: 1626 XXXSDVVTQHGXXXXXXXXXXXSTIASTEPISVDPSDSTKDSGATAQPLPESFGTEHLST 1447
               +D    H             T A+TE  + D ++  K+ GA++Q LP +   E + +
Sbjct: 1575 IGAADGGILHNSESESVNAAF--TPAATELYAADSTEPVKEPGASSQSLPSTAAPERIGS 1632

Query: 1446 SVGD-LLSTEDVLEKYHIVAQNLEDLISKDSKDVEVQGVIDEVPEIILXXXXXXXXXXXX 1270
            S+ +  L T D L+KYHIVAQ L+ LI  D+++ EVQGVI EVPEIIL            
Sbjct: 1633 SILEPSLQTRDALDKYHIVAQKLDALIGNDAREAEVQGVISEVPEIILRCISRDEAALAV 1692

Query: 1269 XXXVFKSLYGNTSNSTHVGAQIAILVALRDVCKVAVKEQLTVLVIYSEDEYKFNKDIIVG 1090
               VFK LY N SN+ H  A +AIL A+RDVCK+ VKE LT  VIYS++E KFN+DI +G
Sbjct: 1693 AQKVFKGLYENASNNLHFSAHLAILAAIRDVCKLVVKE-LTSWVIYSDEERKFNRDITMG 1751

Query: 1089 LIRSELLNLAEYGMHMAKLIDAGRNTTATEFAISLLQALVTQESGIGVSELHNLIEALAK 910
            LIRSELLNLAEY +HMAKLID GRN  ATEFAISLLQ LVT ES + +SELHNL++ALAK
Sbjct: 1752 LIRSELLNLAEYNVHMAKLIDGGRNKAATEFAISLLQTLVTDESRVVISELHNLVDALAK 1811

Query: 909  LTTRPGSPESLPQLLEIARDVSANTSAPSGYMVSNDEKANQARDRKAPSARPSVSRGDDY 730
            L  +PGSPESL QL+EI R+ +AN +A SG   + D+KA Q++D+KA S   + +  +DY
Sbjct: 1812 LAAKPGSPESLQQLIEIVRNPAANANASSGATTAKDDKARQSKDKKAHSH--TTANREDY 1869

Query: 729  NNVESMTADPHGFREQVSILFNEWYRISEAMGTNDVAVTRFVSQLQQSGLLKGDDMTDCF 550
            N  ES+  DP GF EQVS+LF EWY+I E  G+ND A TR+V QL Q+GLLKGDDMTD F
Sbjct: 1870 NIPESVDPDPVGFPEQVSMLFAEWYQICELPGSNDAACTRYVLQLHQNGLLKGDDMTDRF 1929

Query: 549  FRLLTELSVTHCLSTEVFTPGXXXXXXXXXXXXXSFVAIDMYAKLVILILKYCAVDQGSN 370
            FR LTE+SV HCLS+EV  PG              F+AID+YAKL++ ILK C V+QGS+
Sbjct: 1930 FRRLTEVSVAHCLSSEVINPGTLQSPQQSQSLS--FLAIDIYAKLMLSILKCCPVEQGSS 1987

Query: 369  KLFLLPKILLVTVRVIQKDADEKKTAFNPRPYFRLFVNWLLDLGSPDSVLEGANFQILTA 190
            K+FLL KIL VTV+ I KDA+EKK +FNPRPYFRLF+NWLLD+ S D V +G+NFQIL+A
Sbjct: 1988 KIFLLSKILTVTVKFILKDAEEKKASFNPRPYFRLFINWLLDMSSLDPVADGSNFQILSA 2047

Query: 189  FANAFHTLQPLKVPGFSFAWLELVSHRSFMPKLLYGNSQKTSLYVQRLLVDLFKFMEPYL 10
            FANAFH LQPLKVP FSFAWLELVSHRSFMPKLL GN QK   Y+QRLLV+L +F+EP+L
Sbjct: 2048 FANAFHVLQPLKVPAFSFAWLELVSHRSFMPKLLIGNGQKGWPYIQRLLVNLLQFLEPFL 2107

Query: 9    RNA 1
            RNA
Sbjct: 2108 RNA 2110


>ref|XP_006445334.1| hypothetical protein CICLE_v10018430mg [Citrus clementina]
            gi|557547596|gb|ESR58574.1| hypothetical protein
            CICLE_v10018430mg [Citrus clementina]
          Length = 2423

 Score =  994 bits (2569), Expect = 0.0
 Identities = 557/963 (57%), Positives = 678/963 (70%), Gaps = 37/963 (3%)
 Frame = -1

Query: 2778 EVLLKNLGVEMKDVKPTSLLKDRIRELEGNPDFSNKDVMATKPQIIPEVNPPI-----SV 2614
            EVL KNLGV+MKD+ PTSLLKDR RE+EGNPDFSNKDV A++PQ++PEV P I      V
Sbjct: 1157 EVLFKNLGVDMKDITPTSLLKDRKREIEGNPDFSNKDVGASQPQLVPEVKPAIVSPLGHV 1216

Query: 2613 EPQADVVISSHPGG-----------------LLTEDEKMPALTLPERLPSGQGL-PVTPS 2488
            +   DV    + GG                  L EDEK+ AL + ++LPS QGL   + S
Sbjct: 1217 DLPLDVASPPNSGGPTHLLSQYAAPLRLSSGTLMEDEKLAALGISDQLPSAQGLFQASQS 1276

Query: 2487 QSPFSVSQIPTPIANIGTDVIVNPKISALGLQLQFQRIVPMAMERAIKEIMSPVVQRSVT 2308
            QSPFSVSQ+ TPI NIGT VI+N K++ALGL L FQR+VP+AM+RAIKEI+S +VQRSV+
Sbjct: 1277 QSPFSVSQLSTPIPNIGTHVIINQKLTALGLHLHFQRVVPIAMDRAIKEIVSGIVQRSVS 1336

Query: 2307 IAIQTTKELVLKDYAMESDETRIYNAAHLMVASLAGSLAHVTCKEPLRVSISSHLRNMIQ 2128
            IA QTTKELVLKDYAMESDETRIYNAAHLMVASLAGSLAHVTCKEPLR SISS LRN +Q
Sbjct: 1337 IATQTTKELVLKDYAMESDETRIYNAAHLMVASLAGSLAHVTCKEPLRGSISSQLRNSLQ 1396

Query: 2127 PLNVSNDL-EQAVQISTNDNLDLGCAVVEKAAIEKALQTIDGEIAGQLAVRRKRRDAVGP 1951
             L ++++L EQAVQ+ TNDNLDLGCAV+E+AA +KA+QTIDGEIA QL++RRK R+ VG 
Sbjct: 1397 GLTIASELLEQAVQLVTNDNLDLGCAVIEQAATDKAIQTIDGEIAQQLSLRRKHREGVGS 1456

Query: 1950 AYFDATTYTQGPMGGVPEALRPKPGRLSLSQQRVXXN--ALP----------AVQNXXXX 1807
            ++FD   Y QG MG VPEALRPKPG LS+SQQRV  +   LP          A+      
Sbjct: 1457 SFFDPNIYAQGSMG-VPEALRPKPGHLSVSQQRVYEDFVRLPWQNQSSQGSHAMSAGSLT 1515

Query: 1806 XXXXXSLPRSYGLASGQPNPTLYSSTQGDPGFGSVVQPLALASEDMDPASTQILXXXXXX 1627
                 +   +YGLA GQ N   YSS+ G  GF +V +P  +AS   +  S   L      
Sbjct: 1516 SSGDAAQASAYGLAGGQGNQG-YSSSAGSTGFDAVSRPSDVASGTTESTSAGFLSTSLVH 1574

Query: 1626 XXXSDVVTQHGXXXXXXXXXXXSTIASTEPISVDPSDSTKDSGATAQPLPESFGTEHLST 1447
               +D    H             T A+TE  + D ++  K+ GA++Q LP +   E + +
Sbjct: 1575 IGAADGGILHNSESESVNAAF--TPAATELYAADSTEPVKEPGASSQSLPSTAAPERIGS 1632

Query: 1446 SVGD-LLSTEDVLEKYHIVAQNLEDLISKDSKDVEVQGVIDEVPEIILXXXXXXXXXXXX 1270
            S+ +  L T D L+KYHIVAQ L+ LI  D+++ EVQGVI EVPEIIL            
Sbjct: 1633 SILEPSLQTRDALDKYHIVAQKLDALIGNDAREAEVQGVISEVPEIILRCISRDEAALAV 1692

Query: 1269 XXXVFKSLYGNTSNSTHVGAQIAILVALRDVCKVAVKEQLTVLVIYSEDEYKFNKDIIVG 1090
               VFK LY N SN+ H  A +AIL A+RDVCK+ VKE LT  VIYS++E KFN+DI +G
Sbjct: 1693 AQKVFKGLYENASNNLHFSAHLAILAAIRDVCKLVVKE-LTSWVIYSDEERKFNRDITMG 1751

Query: 1089 LIRSELLNLAEYGMHMAKLIDAGRNTTATEFAISLLQALVTQESGIGVSELHNLIEALAK 910
            LIRSELLNLAEY +HMAKLID GRN  ATEFAISLLQ LVT ES + +SELHNL++ALAK
Sbjct: 1752 LIRSELLNLAEYNVHMAKLIDGGRNKAATEFAISLLQTLVTDESRVVISELHNLVDALAK 1811

Query: 909  LTTRPGSPESLPQLLEIARDVSANTSAPSGYMVSNDEKANQARDRKAPSARPSVSRGDDY 730
            L  +PGSPESL QL+EI R+ +AN +A SG   + D+KA Q++D+KA S   + +  +DY
Sbjct: 1812 LAAKPGSPESLQQLIEIVRNPAANANASSGATTAKDDKARQSKDKKAHSH--TTANREDY 1869

Query: 729  NNVESMTADPHGFREQVSILFNEWYRISEAMGTNDVAVTRFVSQLQQSGLLKGDDMTDCF 550
            N  ES+  DP GF EQVS+LF EWY+I E  G+ND A TR+V QL Q+GLLKGDDMTD F
Sbjct: 1870 NIPESVDPDPVGFPEQVSMLFAEWYQICELPGSNDAACTRYVLQLHQNGLLKGDDMTDRF 1929

Query: 549  FRLLTELSVTHCLSTEVFTPGXXXXXXXXXXXXXSFVAIDMYAKLVILILKYCAVDQGSN 370
            FR LTE+SV HCLS+EV  PG              F+AID+YAKL++ ILK C V+QGS+
Sbjct: 1930 FRRLTEVSVAHCLSSEVINPGTLQSPQQSQSLS--FLAIDIYAKLMLSILKCCPVEQGSS 1987

Query: 369  KLFLLPKILLVTVRVIQKDADEKKTAFNPRPYFRLFVNWLLDLGSPDSVLEGANFQILTA 190
            K+FLL KIL VTV+ I KDA+EKK +FNPRPYFRLF+NWLLD+ S D V +G+NFQIL+A
Sbjct: 1988 KIFLLSKILTVTVKFILKDAEEKKASFNPRPYFRLFINWLLDMSSLDPVADGSNFQILSA 2047

Query: 189  FANAFHTLQPLKVPGFSFAWLELVSHRSFMPKLLYGNSQKTSLYVQRLLVDLFKFMEPYL 10
            FANAFH LQPLKVP FSFAWLELVSHRSFMPKLL GN QK   Y+QRLLV+L +F+EP+L
Sbjct: 2048 FANAFHVLQPLKVPAFSFAWLELVSHRSFMPKLLIGNGQKGWPYIQRLLVNLLQFLEPFL 2107

Query: 9    RNA 1
            RNA
Sbjct: 2108 RNA 2110


>ref|XP_006445333.1| hypothetical protein CICLE_v10018430mg [Citrus clementina]
            gi|568875531|ref|XP_006490846.1| PREDICTED: CCR4-NOT
            transcription complex subunit 1-like isoform X2 [Citrus
            sinensis] gi|557547595|gb|ESR58573.1| hypothetical
            protein CICLE_v10018430mg [Citrus clementina]
          Length = 2421

 Score =  994 bits (2569), Expect = 0.0
 Identities = 557/963 (57%), Positives = 678/963 (70%), Gaps = 37/963 (3%)
 Frame = -1

Query: 2778 EVLLKNLGVEMKDVKPTSLLKDRIRELEGNPDFSNKDVMATKPQIIPEVNPPI-----SV 2614
            EVL KNLGV+MKD+ PTSLLKDR RE+EGNPDFSNKDV A++PQ++PEV P I      V
Sbjct: 1157 EVLFKNLGVDMKDITPTSLLKDRKREIEGNPDFSNKDVGASQPQLVPEVKPAIVSPLGHV 1216

Query: 2613 EPQADVVISSHPGG-----------------LLTEDEKMPALTLPERLPSGQGL-PVTPS 2488
            +   DV    + GG                  L EDEK+ AL + ++LPS QGL   + S
Sbjct: 1217 DLPLDVASPPNSGGPTHLLSQYAAPLRLSSGTLMEDEKLAALGISDQLPSAQGLFQASQS 1276

Query: 2487 QSPFSVSQIPTPIANIGTDVIVNPKISALGLQLQFQRIVPMAMERAIKEIMSPVVQRSVT 2308
            QSPFSVSQ+ TPI NIGT VI+N K++ALGL L FQR+VP+AM+RAIKEI+S +VQRSV+
Sbjct: 1277 QSPFSVSQLSTPIPNIGTHVIINQKLTALGLHLHFQRVVPIAMDRAIKEIVSGIVQRSVS 1336

Query: 2307 IAIQTTKELVLKDYAMESDETRIYNAAHLMVASLAGSLAHVTCKEPLRVSISSHLRNMIQ 2128
            IA QTTKELVLKDYAMESDETRIYNAAHLMVASLAGSLAHVTCKEPLR SISS LRN +Q
Sbjct: 1337 IATQTTKELVLKDYAMESDETRIYNAAHLMVASLAGSLAHVTCKEPLRGSISSQLRNSLQ 1396

Query: 2127 PLNVSNDL-EQAVQISTNDNLDLGCAVVEKAAIEKALQTIDGEIAGQLAVRRKRRDAVGP 1951
             L ++++L EQAVQ+ TNDNLDLGCAV+E+AA +KA+QTIDGEIA QL++RRK R+ VG 
Sbjct: 1397 GLTIASELLEQAVQLVTNDNLDLGCAVIEQAATDKAIQTIDGEIAQQLSLRRKHREGVGS 1456

Query: 1950 AYFDATTYTQGPMGGVPEALRPKPGRLSLSQQRVXXN--ALP----------AVQNXXXX 1807
            ++FD   Y QG MG VPEALRPKPG LS+SQQRV  +   LP          A+      
Sbjct: 1457 SFFDPNIYAQGSMG-VPEALRPKPGHLSVSQQRVYEDFVRLPWQNQSSQGSHAMSAGSLT 1515

Query: 1806 XXXXXSLPRSYGLASGQPNPTLYSSTQGDPGFGSVVQPLALASEDMDPASTQILXXXXXX 1627
                 +   +YGLA GQ N   YSS+ G  GF +V +P  +AS   +  S   L      
Sbjct: 1516 SSGDAAQASAYGLAGGQGNQG-YSSSAGSTGFDAVSRPSDVASGTTESTSAGFLSTSLVH 1574

Query: 1626 XXXSDVVTQHGXXXXXXXXXXXSTIASTEPISVDPSDSTKDSGATAQPLPESFGTEHLST 1447
               +D    H             T A+TE  + D ++  K+ GA++Q LP +   E + +
Sbjct: 1575 IGAADGGILHNSESESVNAAF--TPAATELYAADSTEPVKEPGASSQSLPSTAAPERIGS 1632

Query: 1446 SVGD-LLSTEDVLEKYHIVAQNLEDLISKDSKDVEVQGVIDEVPEIILXXXXXXXXXXXX 1270
            S+ +  L T D L+KYHIVAQ L+ LI  D+++ EVQGVI EVPEIIL            
Sbjct: 1633 SILEPSLQTRDALDKYHIVAQKLDALIGNDAREAEVQGVISEVPEIILRCISRDEAALAV 1692

Query: 1269 XXXVFKSLYGNTSNSTHVGAQIAILVALRDVCKVAVKEQLTVLVIYSEDEYKFNKDIIVG 1090
               VFK LY N SN+ H  A +AIL A+RDVCK+ VKE LT  VIYS++E KFN+DI +G
Sbjct: 1693 AQKVFKGLYENASNNLHFSAHLAILAAIRDVCKLVVKE-LTSWVIYSDEERKFNRDITMG 1751

Query: 1089 LIRSELLNLAEYGMHMAKLIDAGRNTTATEFAISLLQALVTQESGIGVSELHNLIEALAK 910
            LIRSELLNLAEY +HMAKLID GRN  ATEFAISLLQ LVT ES + +SELHNL++ALAK
Sbjct: 1752 LIRSELLNLAEYNVHMAKLIDGGRNKAATEFAISLLQTLVTDESRVVISELHNLVDALAK 1811

Query: 909  LTTRPGSPESLPQLLEIARDVSANTSAPSGYMVSNDEKANQARDRKAPSARPSVSRGDDY 730
            L  +PGSPESL QL+EI R+ +AN +A SG   + D+KA Q++D+KA S   + +  +DY
Sbjct: 1812 LAAKPGSPESLQQLIEIVRNPAANANASSGATTAKDDKARQSKDKKAHSH--TTANREDY 1869

Query: 729  NNVESMTADPHGFREQVSILFNEWYRISEAMGTNDVAVTRFVSQLQQSGLLKGDDMTDCF 550
            N  ES+  DP GF EQVS+LF EWY+I E  G+ND A TR+V QL Q+GLLKGDDMTD F
Sbjct: 1870 NIPESVDPDPVGFPEQVSMLFAEWYQICELPGSNDAACTRYVLQLHQNGLLKGDDMTDRF 1929

Query: 549  FRLLTELSVTHCLSTEVFTPGXXXXXXXXXXXXXSFVAIDMYAKLVILILKYCAVDQGSN 370
            FR LTE+SV HCLS+EV  PG              F+AID+YAKL++ ILK C V+QGS+
Sbjct: 1930 FRRLTEVSVAHCLSSEVINPGTLQSPQQSQSLS--FLAIDIYAKLMLSILKCCPVEQGSS 1987

Query: 369  KLFLLPKILLVTVRVIQKDADEKKTAFNPRPYFRLFVNWLLDLGSPDSVLEGANFQILTA 190
            K+FLL KIL VTV+ I KDA+EKK +FNPRPYFRLF+NWLLD+ S D V +G+NFQIL+A
Sbjct: 1988 KIFLLSKILTVTVKFILKDAEEKKASFNPRPYFRLFINWLLDMSSLDPVADGSNFQILSA 2047

Query: 189  FANAFHTLQPLKVPGFSFAWLELVSHRSFMPKLLYGNSQKTSLYVQRLLVDLFKFMEPYL 10
            FANAFH LQPLKVP FSFAWLELVSHRSFMPKLL GN QK   Y+QRLLV+L +F+EP+L
Sbjct: 2048 FANAFHVLQPLKVPAFSFAWLELVSHRSFMPKLLIGNGQKGWPYIQRLLVNLLQFLEPFL 2107

Query: 9    RNA 1
            RNA
Sbjct: 2108 RNA 2110


>gb|KDO85685.1| hypothetical protein CISIN_1g0000721mg [Citrus sinensis]
          Length = 1498

 Score =  993 bits (2568), Expect = 0.0
 Identities = 557/963 (57%), Positives = 678/963 (70%), Gaps = 37/963 (3%)
 Frame = -1

Query: 2778 EVLLKNLGVEMKDVKPTSLLKDRIRELEGNPDFSNKDVMATKPQIIPEVNPPI-----SV 2614
            EVL KNLGV+MKD+ PTSLLKDR RE+EGNPDFSNKDV A++PQ++PEV P I      V
Sbjct: 234  EVLFKNLGVDMKDITPTSLLKDRKREIEGNPDFSNKDVGASQPQLVPEVKPAIVSPLGHV 293

Query: 2613 EPQADVVISSHPGG-----------------LLTEDEKMPALTLPERLPSGQGL-PVTPS 2488
            +   DV    + GG                  L EDEK+ AL + ++LPS QGL   + S
Sbjct: 294  DLPLDVASPPNSGGPTHLLSQYAAPLRLSSGTLMEDEKLAALGISDQLPSAQGLFQASQS 353

Query: 2487 QSPFSVSQIPTPIANIGTDVIVNPKISALGLQLQFQRIVPMAMERAIKEIMSPVVQRSVT 2308
            QSPFSVSQ+ TPI NIGT VI+N K++ALGL L FQR+VP+AM+RAIKEI+S +VQRSV+
Sbjct: 354  QSPFSVSQLSTPIPNIGTHVIINQKLTALGLHLHFQRVVPIAMDRAIKEIVSGIVQRSVS 413

Query: 2307 IAIQTTKELVLKDYAMESDETRIYNAAHLMVASLAGSLAHVTCKEPLRVSISSHLRNMIQ 2128
            IA QTTKELVLKDYAMESDETRIYNAAHLMVASLAGSLAHVTCKEPLR SISS LRN +Q
Sbjct: 414  IATQTTKELVLKDYAMESDETRIYNAAHLMVASLAGSLAHVTCKEPLRGSISSQLRNSLQ 473

Query: 2127 PLNVSNDL-EQAVQISTNDNLDLGCAVVEKAAIEKALQTIDGEIAGQLAVRRKRRDAVGP 1951
             L ++++L EQAVQ+ TNDNLDLGCAV+E+AA +KA+QTIDGEIA QL++RRK R+ VG 
Sbjct: 474  GLTIASELLEQAVQLVTNDNLDLGCAVIEQAATDKAIQTIDGEIAQQLSLRRKHREGVGS 533

Query: 1950 AYFDATTYTQGPMGGVPEALRPKPGRLSLSQQRVXXN--ALP----------AVQNXXXX 1807
            ++FD   Y QG MG VPEALRPKPG LS+SQQRV  +   LP          A+      
Sbjct: 534  SFFDPNIYAQGSMG-VPEALRPKPGHLSVSQQRVYEDFVRLPWQNQSSQGSHAMSAGSLT 592

Query: 1806 XXXXXSLPRSYGLASGQPNPTLYSSTQGDPGFGSVVQPLALASEDMDPASTQILXXXXXX 1627
                 +   +YGLA GQ N   YSS+ G  GF +V +P  +AS   +  S   L      
Sbjct: 593  SSGDAAQASAYGLAGGQGNQG-YSSSAGSTGFDAVSRPSDVASGTTESTSAGFLSTSLVH 651

Query: 1626 XXXSDVVTQHGXXXXXXXXXXXSTIASTEPISVDPSDSTKDSGATAQPLPESFGTEHLST 1447
               +D    H             T A+TE  + D ++  K+ GA++Q LP +   E + +
Sbjct: 652  IGAADGGILHNSESESVNAAF--TPAATELYAADSTEPVKEPGASSQSLPSTAAPERIGS 709

Query: 1446 SVGD-LLSTEDVLEKYHIVAQNLEDLISKDSKDVEVQGVIDEVPEIILXXXXXXXXXXXX 1270
            S+ +  L T D L+KYHIVAQ L+ LI  D+++ EVQGVI EVPEIIL            
Sbjct: 710  SILEPSLQTRDALDKYHIVAQKLDALIGNDAREAEVQGVISEVPEIILRCISRDEAALAV 769

Query: 1269 XXXVFKSLYGNTSNSTHVGAQIAILVALRDVCKVAVKEQLTVLVIYSEDEYKFNKDIIVG 1090
               VFK LY N SN+ H  A +AIL A+RDVCK+ VKE LT  VIYS++E KFN+DI +G
Sbjct: 770  AQKVFKGLYENASNNLHFSAHLAILAAIRDVCKLVVKE-LTSWVIYSDEERKFNRDITMG 828

Query: 1089 LIRSELLNLAEYGMHMAKLIDAGRNTTATEFAISLLQALVTQESGIGVSELHNLIEALAK 910
            LIRSELLNLAEY +HMAKLID GRN  ATEFAISLLQ LVT ES + +SELHNL++ALAK
Sbjct: 829  LIRSELLNLAEYNVHMAKLIDGGRNKAATEFAISLLQTLVTDESRVVISELHNLVDALAK 888

Query: 909  LTTRPGSPESLPQLLEIARDVSANTSAPSGYMVSNDEKANQARDRKAPSARPSVSRGDDY 730
            L  +PGSPESL QL+EI R+ +AN +A SG   + D+KA Q++D+KA S   + +  +DY
Sbjct: 889  LAAKPGSPESLQQLIEIVRNPAANANASSGATTAKDDKARQSKDKKAYSH--TTANREDY 946

Query: 729  NNVESMTADPHGFREQVSILFNEWYRISEAMGTNDVAVTRFVSQLQQSGLLKGDDMTDCF 550
            N  ES+  DP GF EQVS+LF EWY+I E  G+ND A TR+V QL Q+GLLKGDDMTD F
Sbjct: 947  NIPESVDPDPVGFPEQVSMLFAEWYQICELPGSNDAACTRYVLQLHQNGLLKGDDMTDRF 1006

Query: 549  FRLLTELSVTHCLSTEVFTPGXXXXXXXXXXXXXSFVAIDMYAKLVILILKYCAVDQGSN 370
            FR LTE+SV HCLS+EV  PG              F+AID+YAKL++ ILK C V+QGS+
Sbjct: 1007 FRRLTEVSVAHCLSSEVINPGTLQSPQQSQSLS--FLAIDIYAKLMLSILKCCPVEQGSS 1064

Query: 369  KLFLLPKILLVTVRVIQKDADEKKTAFNPRPYFRLFVNWLLDLGSPDSVLEGANFQILTA 190
            K+FLL KIL VTV+ I KDA+EKK +FNPRPYFRLF+NWLLD+ S D V +G+NFQIL+A
Sbjct: 1065 KIFLLSKILTVTVKFILKDAEEKKASFNPRPYFRLFINWLLDMSSLDPVADGSNFQILSA 1124

Query: 189  FANAFHTLQPLKVPGFSFAWLELVSHRSFMPKLLYGNSQKTSLYVQRLLVDLFKFMEPYL 10
            FANAFH LQPLKVP FSFAWLELVSHRSFMPKLL GN QK   Y+QRLLV+L +F+EP+L
Sbjct: 1125 FANAFHVLQPLKVPAFSFAWLELVSHRSFMPKLLIGNGQKGWPYIQRLLVNLLQFLEPFL 1184

Query: 9    RNA 1
            RNA
Sbjct: 1185 RNA 1187


>gb|KDO85680.1| hypothetical protein CISIN_1g0000721mg, partial [Citrus sinensis]
          Length = 1623

 Score =  993 bits (2568), Expect = 0.0
 Identities = 557/963 (57%), Positives = 678/963 (70%), Gaps = 37/963 (3%)
 Frame = -1

Query: 2778 EVLLKNLGVEMKDVKPTSLLKDRIRELEGNPDFSNKDVMATKPQIIPEVNPPI-----SV 2614
            EVL KNLGV+MKD+ PTSLLKDR RE+EGNPDFSNKDV A++PQ++PEV P I      V
Sbjct: 418  EVLFKNLGVDMKDITPTSLLKDRKREIEGNPDFSNKDVGASQPQLVPEVKPAIVSPLGHV 477

Query: 2613 EPQADVVISSHPGG-----------------LLTEDEKMPALTLPERLPSGQGL-PVTPS 2488
            +   DV    + GG                  L EDEK+ AL + ++LPS QGL   + S
Sbjct: 478  DLPLDVASPPNSGGPTHLLSQYAAPLRLSSGTLMEDEKLAALGISDQLPSAQGLFQASQS 537

Query: 2487 QSPFSVSQIPTPIANIGTDVIVNPKISALGLQLQFQRIVPMAMERAIKEIMSPVVQRSVT 2308
            QSPFSVSQ+ TPI NIGT VI+N K++ALGL L FQR+VP+AM+RAIKEI+S +VQRSV+
Sbjct: 538  QSPFSVSQLSTPIPNIGTHVIINQKLTALGLHLHFQRVVPIAMDRAIKEIVSGIVQRSVS 597

Query: 2307 IAIQTTKELVLKDYAMESDETRIYNAAHLMVASLAGSLAHVTCKEPLRVSISSHLRNMIQ 2128
            IA QTTKELVLKDYAMESDETRIYNAAHLMVASLAGSLAHVTCKEPLR SISS LRN +Q
Sbjct: 598  IATQTTKELVLKDYAMESDETRIYNAAHLMVASLAGSLAHVTCKEPLRGSISSQLRNSLQ 657

Query: 2127 PLNVSNDL-EQAVQISTNDNLDLGCAVVEKAAIEKALQTIDGEIAGQLAVRRKRRDAVGP 1951
             L ++++L EQAVQ+ TNDNLDLGCAV+E+AA +KA+QTIDGEIA QL++RRK R+ VG 
Sbjct: 658  GLTIASELLEQAVQLVTNDNLDLGCAVIEQAATDKAIQTIDGEIAQQLSLRRKHREGVGS 717

Query: 1950 AYFDATTYTQGPMGGVPEALRPKPGRLSLSQQRVXXN--ALP----------AVQNXXXX 1807
            ++FD   Y QG MG VPEALRPKPG LS+SQQRV  +   LP          A+      
Sbjct: 718  SFFDPNIYAQGSMG-VPEALRPKPGHLSVSQQRVYEDFVRLPWQNQSSQGSHAMSAGSLT 776

Query: 1806 XXXXXSLPRSYGLASGQPNPTLYSSTQGDPGFGSVVQPLALASEDMDPASTQILXXXXXX 1627
                 +   +YGLA GQ N   YSS+ G  GF +V +P  +AS   +  S   L      
Sbjct: 777  SSGDAAQASAYGLAGGQGNQG-YSSSAGSTGFDAVSRPSDVASGTTESTSAGFLSTSLVH 835

Query: 1626 XXXSDVVTQHGXXXXXXXXXXXSTIASTEPISVDPSDSTKDSGATAQPLPESFGTEHLST 1447
               +D    H             T A+TE  + D ++  K+ GA++Q LP +   E + +
Sbjct: 836  IGAADGGILHNSESESVNAAF--TPAATELYAADSTEPVKEPGASSQSLPSTAAPERIGS 893

Query: 1446 SVGD-LLSTEDVLEKYHIVAQNLEDLISKDSKDVEVQGVIDEVPEIILXXXXXXXXXXXX 1270
            S+ +  L T D L+KYHIVAQ L+ LI  D+++ EVQGVI EVPEIIL            
Sbjct: 894  SILEPSLQTRDALDKYHIVAQKLDALIGNDAREAEVQGVISEVPEIILRCISRDEAALAV 953

Query: 1269 XXXVFKSLYGNTSNSTHVGAQIAILVALRDVCKVAVKEQLTVLVIYSEDEYKFNKDIIVG 1090
               VFK LY N SN+ H  A +AIL A+RDVCK+ VKE LT  VIYS++E KFN+DI +G
Sbjct: 954  AQKVFKGLYENASNNLHFSAHLAILAAIRDVCKLVVKE-LTSWVIYSDEERKFNRDITMG 1012

Query: 1089 LIRSELLNLAEYGMHMAKLIDAGRNTTATEFAISLLQALVTQESGIGVSELHNLIEALAK 910
            LIRSELLNLAEY +HMAKLID GRN  ATEFAISLLQ LVT ES + +SELHNL++ALAK
Sbjct: 1013 LIRSELLNLAEYNVHMAKLIDGGRNKAATEFAISLLQTLVTDESRVVISELHNLVDALAK 1072

Query: 909  LTTRPGSPESLPQLLEIARDVSANTSAPSGYMVSNDEKANQARDRKAPSARPSVSRGDDY 730
            L  +PGSPESL QL+EI R+ +AN +A SG   + D+KA Q++D+KA S   + +  +DY
Sbjct: 1073 LAAKPGSPESLQQLIEIVRNPAANANASSGATTAKDDKARQSKDKKAYSH--TTANREDY 1130

Query: 729  NNVESMTADPHGFREQVSILFNEWYRISEAMGTNDVAVTRFVSQLQQSGLLKGDDMTDCF 550
            N  ES+  DP GF EQVS+LF EWY+I E  G+ND A TR+V QL Q+GLLKGDDMTD F
Sbjct: 1131 NIPESVDPDPVGFPEQVSMLFAEWYQICELPGSNDAACTRYVLQLHQNGLLKGDDMTDRF 1190

Query: 549  FRLLTELSVTHCLSTEVFTPGXXXXXXXXXXXXXSFVAIDMYAKLVILILKYCAVDQGSN 370
            FR LTE+SV HCLS+EV  PG              F+AID+YAKL++ ILK C V+QGS+
Sbjct: 1191 FRRLTEVSVAHCLSSEVINPGTLQSPQQSQSLS--FLAIDIYAKLMLSILKCCPVEQGSS 1248

Query: 369  KLFLLPKILLVTVRVIQKDADEKKTAFNPRPYFRLFVNWLLDLGSPDSVLEGANFQILTA 190
            K+FLL KIL VTV+ I KDA+EKK +FNPRPYFRLF+NWLLD+ S D V +G+NFQIL+A
Sbjct: 1249 KIFLLSKILTVTVKFILKDAEEKKASFNPRPYFRLFINWLLDMSSLDPVADGSNFQILSA 1308

Query: 189  FANAFHTLQPLKVPGFSFAWLELVSHRSFMPKLLYGNSQKTSLYVQRLLVDLFKFMEPYL 10
            FANAFH LQPLKVP FSFAWLELVSHRSFMPKLL GN QK   Y+QRLLV+L +F+EP+L
Sbjct: 1309 FANAFHVLQPLKVPAFSFAWLELVSHRSFMPKLLIGNGQKGWPYIQRLLVNLLQFLEPFL 1368

Query: 9    RNA 1
            RNA
Sbjct: 1369 RNA 1371


>gb|KDO85679.1| hypothetical protein CISIN_1g0000721mg, partial [Citrus sinensis]
          Length = 1666

 Score =  993 bits (2568), Expect = 0.0
 Identities = 557/963 (57%), Positives = 678/963 (70%), Gaps = 37/963 (3%)
 Frame = -1

Query: 2778 EVLLKNLGVEMKDVKPTSLLKDRIRELEGNPDFSNKDVMATKPQIIPEVNPPI-----SV 2614
            EVL KNLGV+MKD+ PTSLLKDR RE+EGNPDFSNKDV A++PQ++PEV P I      V
Sbjct: 402  EVLFKNLGVDMKDITPTSLLKDRKREIEGNPDFSNKDVGASQPQLVPEVKPAIVSPLGHV 461

Query: 2613 EPQADVVISSHPGG-----------------LLTEDEKMPALTLPERLPSGQGL-PVTPS 2488
            +   DV    + GG                  L EDEK+ AL + ++LPS QGL   + S
Sbjct: 462  DLPLDVASPPNSGGPTHLLSQYAAPLRLSSGTLMEDEKLAALGISDQLPSAQGLFQASQS 521

Query: 2487 QSPFSVSQIPTPIANIGTDVIVNPKISALGLQLQFQRIVPMAMERAIKEIMSPVVQRSVT 2308
            QSPFSVSQ+ TPI NIGT VI+N K++ALGL L FQR+VP+AM+RAIKEI+S +VQRSV+
Sbjct: 522  QSPFSVSQLSTPIPNIGTHVIINQKLTALGLHLHFQRVVPIAMDRAIKEIVSGIVQRSVS 581

Query: 2307 IAIQTTKELVLKDYAMESDETRIYNAAHLMVASLAGSLAHVTCKEPLRVSISSHLRNMIQ 2128
            IA QTTKELVLKDYAMESDETRIYNAAHLMVASLAGSLAHVTCKEPLR SISS LRN +Q
Sbjct: 582  IATQTTKELVLKDYAMESDETRIYNAAHLMVASLAGSLAHVTCKEPLRGSISSQLRNSLQ 641

Query: 2127 PLNVSNDL-EQAVQISTNDNLDLGCAVVEKAAIEKALQTIDGEIAGQLAVRRKRRDAVGP 1951
             L ++++L EQAVQ+ TNDNLDLGCAV+E+AA +KA+QTIDGEIA QL++RRK R+ VG 
Sbjct: 642  GLTIASELLEQAVQLVTNDNLDLGCAVIEQAATDKAIQTIDGEIAQQLSLRRKHREGVGS 701

Query: 1950 AYFDATTYTQGPMGGVPEALRPKPGRLSLSQQRVXXN--ALP----------AVQNXXXX 1807
            ++FD   Y QG MG VPEALRPKPG LS+SQQRV  +   LP          A+      
Sbjct: 702  SFFDPNIYAQGSMG-VPEALRPKPGHLSVSQQRVYEDFVRLPWQNQSSQGSHAMSAGSLT 760

Query: 1806 XXXXXSLPRSYGLASGQPNPTLYSSTQGDPGFGSVVQPLALASEDMDPASTQILXXXXXX 1627
                 +   +YGLA GQ N   YSS+ G  GF +V +P  +AS   +  S   L      
Sbjct: 761  SSGDAAQASAYGLAGGQGNQG-YSSSAGSTGFDAVSRPSDVASGTTESTSAGFLSTSLVH 819

Query: 1626 XXXSDVVTQHGXXXXXXXXXXXSTIASTEPISVDPSDSTKDSGATAQPLPESFGTEHLST 1447
               +D    H             T A+TE  + D ++  K+ GA++Q LP +   E + +
Sbjct: 820  IGAADGGILHNSESESVNAAF--TPAATELYAADSTEPVKEPGASSQSLPSTAAPERIGS 877

Query: 1446 SVGD-LLSTEDVLEKYHIVAQNLEDLISKDSKDVEVQGVIDEVPEIILXXXXXXXXXXXX 1270
            S+ +  L T D L+KYHIVAQ L+ LI  D+++ EVQGVI EVPEIIL            
Sbjct: 878  SILEPSLQTRDALDKYHIVAQKLDALIGNDAREAEVQGVISEVPEIILRCISRDEAALAV 937

Query: 1269 XXXVFKSLYGNTSNSTHVGAQIAILVALRDVCKVAVKEQLTVLVIYSEDEYKFNKDIIVG 1090
               VFK LY N SN+ H  A +AIL A+RDVCK+ VKE LT  VIYS++E KFN+DI +G
Sbjct: 938  AQKVFKGLYENASNNLHFSAHLAILAAIRDVCKLVVKE-LTSWVIYSDEERKFNRDITMG 996

Query: 1089 LIRSELLNLAEYGMHMAKLIDAGRNTTATEFAISLLQALVTQESGIGVSELHNLIEALAK 910
            LIRSELLNLAEY +HMAKLID GRN  ATEFAISLLQ LVT ES + +SELHNL++ALAK
Sbjct: 997  LIRSELLNLAEYNVHMAKLIDGGRNKAATEFAISLLQTLVTDESRVVISELHNLVDALAK 1056

Query: 909  LTTRPGSPESLPQLLEIARDVSANTSAPSGYMVSNDEKANQARDRKAPSARPSVSRGDDY 730
            L  +PGSPESL QL+EI R+ +AN +A SG   + D+KA Q++D+KA S   + +  +DY
Sbjct: 1057 LAAKPGSPESLQQLIEIVRNPAANANASSGATTAKDDKARQSKDKKAYSH--TTANREDY 1114

Query: 729  NNVESMTADPHGFREQVSILFNEWYRISEAMGTNDVAVTRFVSQLQQSGLLKGDDMTDCF 550
            N  ES+  DP GF EQVS+LF EWY+I E  G+ND A TR+V QL Q+GLLKGDDMTD F
Sbjct: 1115 NIPESVDPDPVGFPEQVSMLFAEWYQICELPGSNDAACTRYVLQLHQNGLLKGDDMTDRF 1174

Query: 549  FRLLTELSVTHCLSTEVFTPGXXXXXXXXXXXXXSFVAIDMYAKLVILILKYCAVDQGSN 370
            FR LTE+SV HCLS+EV  PG              F+AID+YAKL++ ILK C V+QGS+
Sbjct: 1175 FRRLTEVSVAHCLSSEVINPGTLQSPQQSQSLS--FLAIDIYAKLMLSILKCCPVEQGSS 1232

Query: 369  KLFLLPKILLVTVRVIQKDADEKKTAFNPRPYFRLFVNWLLDLGSPDSVLEGANFQILTA 190
            K+FLL KIL VTV+ I KDA+EKK +FNPRPYFRLF+NWLLD+ S D V +G+NFQIL+A
Sbjct: 1233 KIFLLSKILTVTVKFILKDAEEKKASFNPRPYFRLFINWLLDMSSLDPVADGSNFQILSA 1292

Query: 189  FANAFHTLQPLKVPGFSFAWLELVSHRSFMPKLLYGNSQKTSLYVQRLLVDLFKFMEPYL 10
            FANAFH LQPLKVP FSFAWLELVSHRSFMPKLL GN QK   Y+QRLLV+L +F+EP+L
Sbjct: 1293 FANAFHVLQPLKVPAFSFAWLELVSHRSFMPKLLIGNGQKGWPYIQRLLVNLLQFLEPFL 1352

Query: 9    RNA 1
            RNA
Sbjct: 1353 RNA 1355


>gb|KDO85674.1| hypothetical protein CISIN_1g0000721mg, partial [Citrus sinensis]
            gi|641866991|gb|KDO85675.1| hypothetical protein
            CISIN_1g0000721mg, partial [Citrus sinensis]
          Length = 1682

 Score =  993 bits (2568), Expect = 0.0
 Identities = 557/963 (57%), Positives = 678/963 (70%), Gaps = 37/963 (3%)
 Frame = -1

Query: 2778 EVLLKNLGVEMKDVKPTSLLKDRIRELEGNPDFSNKDVMATKPQIIPEVNPPI-----SV 2614
            EVL KNLGV+MKD+ PTSLLKDR RE+EGNPDFSNKDV A++PQ++PEV P I      V
Sbjct: 418  EVLFKNLGVDMKDITPTSLLKDRKREIEGNPDFSNKDVGASQPQLVPEVKPAIVSPLGHV 477

Query: 2613 EPQADVVISSHPGG-----------------LLTEDEKMPALTLPERLPSGQGL-PVTPS 2488
            +   DV    + GG                  L EDEK+ AL + ++LPS QGL   + S
Sbjct: 478  DLPLDVASPPNSGGPTHLLSQYAAPLRLSSGTLMEDEKLAALGISDQLPSAQGLFQASQS 537

Query: 2487 QSPFSVSQIPTPIANIGTDVIVNPKISALGLQLQFQRIVPMAMERAIKEIMSPVVQRSVT 2308
            QSPFSVSQ+ TPI NIGT VI+N K++ALGL L FQR+VP+AM+RAIKEI+S +VQRSV+
Sbjct: 538  QSPFSVSQLSTPIPNIGTHVIINQKLTALGLHLHFQRVVPIAMDRAIKEIVSGIVQRSVS 597

Query: 2307 IAIQTTKELVLKDYAMESDETRIYNAAHLMVASLAGSLAHVTCKEPLRVSISSHLRNMIQ 2128
            IA QTTKELVLKDYAMESDETRIYNAAHLMVASLAGSLAHVTCKEPLR SISS LRN +Q
Sbjct: 598  IATQTTKELVLKDYAMESDETRIYNAAHLMVASLAGSLAHVTCKEPLRGSISSQLRNSLQ 657

Query: 2127 PLNVSNDL-EQAVQISTNDNLDLGCAVVEKAAIEKALQTIDGEIAGQLAVRRKRRDAVGP 1951
             L ++++L EQAVQ+ TNDNLDLGCAV+E+AA +KA+QTIDGEIA QL++RRK R+ VG 
Sbjct: 658  GLTIASELLEQAVQLVTNDNLDLGCAVIEQAATDKAIQTIDGEIAQQLSLRRKHREGVGS 717

Query: 1950 AYFDATTYTQGPMGGVPEALRPKPGRLSLSQQRVXXN--ALP----------AVQNXXXX 1807
            ++FD   Y QG MG VPEALRPKPG LS+SQQRV  +   LP          A+      
Sbjct: 718  SFFDPNIYAQGSMG-VPEALRPKPGHLSVSQQRVYEDFVRLPWQNQSSQGSHAMSAGSLT 776

Query: 1806 XXXXXSLPRSYGLASGQPNPTLYSSTQGDPGFGSVVQPLALASEDMDPASTQILXXXXXX 1627
                 +   +YGLA GQ N   YSS+ G  GF +V +P  +AS   +  S   L      
Sbjct: 777  SSGDAAQASAYGLAGGQGNQG-YSSSAGSTGFDAVSRPSDVASGTTESTSAGFLSTSLVH 835

Query: 1626 XXXSDVVTQHGXXXXXXXXXXXSTIASTEPISVDPSDSTKDSGATAQPLPESFGTEHLST 1447
               +D    H             T A+TE  + D ++  K+ GA++Q LP +   E + +
Sbjct: 836  IGAADGGILHNSESESVNAAF--TPAATELYAADSTEPVKEPGASSQSLPSTAAPERIGS 893

Query: 1446 SVGD-LLSTEDVLEKYHIVAQNLEDLISKDSKDVEVQGVIDEVPEIILXXXXXXXXXXXX 1270
            S+ +  L T D L+KYHIVAQ L+ LI  D+++ EVQGVI EVPEIIL            
Sbjct: 894  SILEPSLQTRDALDKYHIVAQKLDALIGNDAREAEVQGVISEVPEIILRCISRDEAALAV 953

Query: 1269 XXXVFKSLYGNTSNSTHVGAQIAILVALRDVCKVAVKEQLTVLVIYSEDEYKFNKDIIVG 1090
               VFK LY N SN+ H  A +AIL A+RDVCK+ VKE LT  VIYS++E KFN+DI +G
Sbjct: 954  AQKVFKGLYENASNNLHFSAHLAILAAIRDVCKLVVKE-LTSWVIYSDEERKFNRDITMG 1012

Query: 1089 LIRSELLNLAEYGMHMAKLIDAGRNTTATEFAISLLQALVTQESGIGVSELHNLIEALAK 910
            LIRSELLNLAEY +HMAKLID GRN  ATEFAISLLQ LVT ES + +SELHNL++ALAK
Sbjct: 1013 LIRSELLNLAEYNVHMAKLIDGGRNKAATEFAISLLQTLVTDESRVVISELHNLVDALAK 1072

Query: 909  LTTRPGSPESLPQLLEIARDVSANTSAPSGYMVSNDEKANQARDRKAPSARPSVSRGDDY 730
            L  +PGSPESL QL+EI R+ +AN +A SG   + D+KA Q++D+KA S   + +  +DY
Sbjct: 1073 LAAKPGSPESLQQLIEIVRNPAANANASSGATTAKDDKARQSKDKKAYSH--TTANREDY 1130

Query: 729  NNVESMTADPHGFREQVSILFNEWYRISEAMGTNDVAVTRFVSQLQQSGLLKGDDMTDCF 550
            N  ES+  DP GF EQVS+LF EWY+I E  G+ND A TR+V QL Q+GLLKGDDMTD F
Sbjct: 1131 NIPESVDPDPVGFPEQVSMLFAEWYQICELPGSNDAACTRYVLQLHQNGLLKGDDMTDRF 1190

Query: 549  FRLLTELSVTHCLSTEVFTPGXXXXXXXXXXXXXSFVAIDMYAKLVILILKYCAVDQGSN 370
            FR LTE+SV HCLS+EV  PG              F+AID+YAKL++ ILK C V+QGS+
Sbjct: 1191 FRRLTEVSVAHCLSSEVINPGTLQSPQQSQSLS--FLAIDIYAKLMLSILKCCPVEQGSS 1248

Query: 369  KLFLLPKILLVTVRVIQKDADEKKTAFNPRPYFRLFVNWLLDLGSPDSVLEGANFQILTA 190
            K+FLL KIL VTV+ I KDA+EKK +FNPRPYFRLF+NWLLD+ S D V +G+NFQIL+A
Sbjct: 1249 KIFLLSKILTVTVKFILKDAEEKKASFNPRPYFRLFINWLLDMSSLDPVADGSNFQILSA 1308

Query: 189  FANAFHTLQPLKVPGFSFAWLELVSHRSFMPKLLYGNSQKTSLYVQRLLVDLFKFMEPYL 10
            FANAFH LQPLKVP FSFAWLELVSHRSFMPKLL GN QK   Y+QRLLV+L +F+EP+L
Sbjct: 1309 FANAFHVLQPLKVPAFSFAWLELVSHRSFMPKLLIGNGQKGWPYIQRLLVNLLQFLEPFL 1368

Query: 9    RNA 1
            RNA
Sbjct: 1369 RNA 1371