BLASTX nr result
ID: Papaver29_contig00029844
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Papaver29_contig00029844
(443 letters)
Database: ./nr
77,306,371 sequences; 28,104,191,420 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_010244378.1| PREDICTED: RNA polymerase sigma factor sigC ... 224 3e-56
ref|XP_006355305.1| PREDICTED: RNA polymerase sigma factor sigC-... 222 7e-56
ref|XP_009623297.1| PREDICTED: RNA polymerase sigma factor sigC ... 220 4e-55
ref|XP_009623296.1| PREDICTED: RNA polymerase sigma factor sigC ... 220 4e-55
ref|XP_012077339.1| PREDICTED: RNA polymerase sigma factor sigC ... 219 6e-55
gb|KDP34138.1| hypothetical protein JCGZ_07709 [Jatropha curcas] 219 6e-55
gb|AKC88685.1| sigma factor [Francoa sonchifolia] 218 2e-54
ref|XP_009757464.1| PREDICTED: RNA polymerase sigma factor sigC ... 217 2e-54
ref|XP_009757459.1| PREDICTED: RNA polymerase sigma factor sigC ... 217 2e-54
ref|XP_004245130.1| PREDICTED: RNA polymerase sigma factor sigC ... 216 5e-54
ref|XP_013675845.1| PREDICTED: RNA polymerase sigma factor sigC-... 215 9e-54
ref|XP_010047303.1| PREDICTED: RNA polymerase sigma factor sigC ... 215 1e-53
gb|KCW79184.1| hypothetical protein EUGRSUZ_C00620 [Eucalyptus g... 215 1e-53
ref|XP_007012219.1| RNApolymerase sigma-subunit C, putative [The... 215 1e-53
ref|XP_002877947.1| predicted protein [Arabidopsis lyrata subsp.... 214 3e-53
ref|XP_010427052.1| PREDICTED: RNA polymerase sigma factor sigC-... 213 3e-53
ref|XP_010427051.1| PREDICTED: RNA polymerase sigma factor sigC-... 213 3e-53
ref|XP_010504173.1| PREDICTED: RNA polymerase sigma factor sigC ... 213 3e-53
ref|XP_010504172.1| PREDICTED: RNA polymerase sigma factor sigC ... 213 3e-53
ref|XP_010504171.1| PREDICTED: RNA polymerase sigma factor sigC ... 213 3e-53
>ref|XP_010244378.1| PREDICTED: RNA polymerase sigma factor sigC [Nelumbo nucifera]
gi|720088207|ref|XP_010244379.1| PREDICTED: RNA
polymerase sigma factor sigC [Nelumbo nucifera]
Length = 558
Score = 224 bits (570), Expect = 3e-56
Identities = 107/145 (73%), Positives = 127/145 (87%)
Frame = +1
Query: 7 RSKRVIVAKNESEMSRGVKEVVNLERIRTMLEEETGRVASFKSWAEAARIDERLLKERLH 186
+S+R+++A+NESEMSR VKEV LERIR+ LEEE GRV SF SWAEA +DE+ L++RLH
Sbjct: 256 KSRRLMIARNESEMSRAVKEVSCLERIRSNLEEELGRVISFSSWAEAVGLDEKELQQRLH 315
Query: 187 FGWYCRDKLLKSTRSLVLFLARNYRGVGISLEDLLQAGYMGVLLGAERYDHTRGYRFSTY 366
FGWYCRDKLL+STRSLV++LARNYRG+GI+ EDLLQAG GVL GAER+DHTRGYRFSTY
Sbjct: 316 FGWYCRDKLLRSTRSLVVYLARNYRGLGIAFEDLLQAGNFGVLQGAERFDHTRGYRFSTY 375
Query: 367 VQYWIRKSMSAYVAQNSRGIQLPAT 441
VQYWIRKSMS VAQ+SRG+ +P T
Sbjct: 376 VQYWIRKSMSTLVAQHSRGVHIPLT 400
>ref|XP_006355305.1| PREDICTED: RNA polymerase sigma factor sigC-like [Solanum
tuberosum]
Length = 555
Score = 222 bits (566), Expect = 7e-56
Identities = 105/145 (72%), Positives = 130/145 (89%)
Frame = +1
Query: 7 RSKRVIVAKNESEMSRGVKEVVNLERIRTMLEEETGRVASFKSWAEAARIDERLLKERLH 186
R+KR +AKNE+EMSRGVK V LERIR++LEEETGRVA+F SWAEAA I+++ L++RLH
Sbjct: 254 RNKRQKIAKNEAEMSRGVKLVAQLERIRSILEEETGRVATFSSWAEAAGIEQKELQQRLH 313
Query: 187 FGWYCRDKLLKSTRSLVLFLARNYRGVGISLEDLLQAGYMGVLLGAERYDHTRGYRFSTY 366
FGWYCRD+LLKSTRSLVL+LARNYRG+G++ EDL+QAG MGVL GA R+DHTRGY+FSTY
Sbjct: 314 FGWYCRDELLKSTRSLVLYLARNYRGLGVAFEDLIQAGNMGVLQGAVRFDHTRGYKFSTY 373
Query: 367 VQYWIRKSMSAYVAQNSRGIQLPAT 441
VQYWIRKS+S VAQ++RG+++P T
Sbjct: 374 VQYWIRKSLSKLVAQHARGVRIPFT 398
>ref|XP_009623297.1| PREDICTED: RNA polymerase sigma factor sigC isoform X2 [Nicotiana
tomentosiformis]
Length = 560
Score = 220 bits (560), Expect = 4e-55
Identities = 105/145 (72%), Positives = 129/145 (88%)
Frame = +1
Query: 7 RSKRVIVAKNESEMSRGVKEVVNLERIRTMLEEETGRVASFKSWAEAARIDERLLKERLH 186
R+KR +AKNE+EMSRGVK V LERIR++LEEETGRVASF SWAEAA ++++ L++RLH
Sbjct: 259 RNKRQKIAKNEAEMSRGVKLVAELERIRSILEEETGRVASFSSWAEAAGVEQKELQQRLH 318
Query: 187 FGWYCRDKLLKSTRSLVLFLARNYRGVGISLEDLLQAGYMGVLLGAERYDHTRGYRFSTY 366
FGWYCRD+LLKSTRSLVL+LARNYRG+G++ EDL+QAG MGVL GA R+D TRGY+FSTY
Sbjct: 319 FGWYCRDELLKSTRSLVLYLARNYRGLGVAFEDLIQAGNMGVLQGAVRFDDTRGYKFSTY 378
Query: 367 VQYWIRKSMSAYVAQNSRGIQLPAT 441
VQYWIRKS+S VAQ++RGI++P T
Sbjct: 379 VQYWIRKSLSKLVAQHARGIRIPFT 403
>ref|XP_009623296.1| PREDICTED: RNA polymerase sigma factor sigC isoform X1 [Nicotiana
tomentosiformis]
Length = 572
Score = 220 bits (560), Expect = 4e-55
Identities = 105/145 (72%), Positives = 129/145 (88%)
Frame = +1
Query: 7 RSKRVIVAKNESEMSRGVKEVVNLERIRTMLEEETGRVASFKSWAEAARIDERLLKERLH 186
R+KR +AKNE+EMSRGVK V LERIR++LEEETGRVASF SWAEAA ++++ L++RLH
Sbjct: 271 RNKRQKIAKNEAEMSRGVKLVAELERIRSILEEETGRVASFSSWAEAAGVEQKELQQRLH 330
Query: 187 FGWYCRDKLLKSTRSLVLFLARNYRGVGISLEDLLQAGYMGVLLGAERYDHTRGYRFSTY 366
FGWYCRD+LLKSTRSLVL+LARNYRG+G++ EDL+QAG MGVL GA R+D TRGY+FSTY
Sbjct: 331 FGWYCRDELLKSTRSLVLYLARNYRGLGVAFEDLIQAGNMGVLQGAVRFDDTRGYKFSTY 390
Query: 367 VQYWIRKSMSAYVAQNSRGIQLPAT 441
VQYWIRKS+S VAQ++RGI++P T
Sbjct: 391 VQYWIRKSLSKLVAQHARGIRIPFT 415
>ref|XP_012077339.1| PREDICTED: RNA polymerase sigma factor sigC [Jatropha curcas]
Length = 606
Score = 219 bits (558), Expect = 6e-55
Identities = 102/147 (69%), Positives = 129/147 (87%)
Frame = +1
Query: 1 NKRSKRVIVAKNESEMSRGVKEVVNLERIRTMLEEETGRVASFKSWAEAARIDERLLKER 180
N +S+R+++A+NE+EMSRGVK + NLE+IRT LE+ETGR S WAEAA +D ++L+++
Sbjct: 302 NSKSRRLMIARNEAEMSRGVKVLANLEKIRTTLEQETGRAVSLSCWAEAAGLDMKVLQQQ 361
Query: 181 LHFGWYCRDKLLKSTRSLVLFLARNYRGVGISLEDLLQAGYMGVLLGAERYDHTRGYRFS 360
LHFGWYCRD+L++STRSLVLFLARNYRG+GI+LEDLLQAG MGVL GAER+D RGYRFS
Sbjct: 362 LHFGWYCRDELVRSTRSLVLFLARNYRGMGIALEDLLQAGNMGVLQGAERFDDARGYRFS 421
Query: 361 TYVQYWIRKSMSAYVAQNSRGIQLPAT 441
TYVQYWIRKSMS V++++RGIQ+P T
Sbjct: 422 TYVQYWIRKSMSKIVSRHARGIQIPCT 448
>gb|KDP34138.1| hypothetical protein JCGZ_07709 [Jatropha curcas]
Length = 564
Score = 219 bits (558), Expect = 6e-55
Identities = 102/147 (69%), Positives = 129/147 (87%)
Frame = +1
Query: 1 NKRSKRVIVAKNESEMSRGVKEVVNLERIRTMLEEETGRVASFKSWAEAARIDERLLKER 180
N +S+R+++A+NE+EMSRGVK + NLE+IRT LE+ETGR S WAEAA +D ++L+++
Sbjct: 260 NSKSRRLMIARNEAEMSRGVKVLANLEKIRTTLEQETGRAVSLSCWAEAAGLDMKVLQQQ 319
Query: 181 LHFGWYCRDKLLKSTRSLVLFLARNYRGVGISLEDLLQAGYMGVLLGAERYDHTRGYRFS 360
LHFGWYCRD+L++STRSLVLFLARNYRG+GI+LEDLLQAG MGVL GAER+D RGYRFS
Sbjct: 320 LHFGWYCRDELVRSTRSLVLFLARNYRGMGIALEDLLQAGNMGVLQGAERFDDARGYRFS 379
Query: 361 TYVQYWIRKSMSAYVAQNSRGIQLPAT 441
TYVQYWIRKSMS V++++RGIQ+P T
Sbjct: 380 TYVQYWIRKSMSKIVSRHARGIQIPCT 406
>gb|AKC88685.1| sigma factor [Francoa sonchifolia]
Length = 540
Score = 218 bits (554), Expect = 2e-54
Identities = 102/147 (69%), Positives = 128/147 (87%)
Frame = +1
Query: 1 NKRSKRVIVAKNESEMSRGVKEVVNLERIRTMLEEETGRVASFKSWAEAARIDERLLKER 180
N R +R+++A+NE+EMSRGVK + +LERIRT LE+ETGRV S +WAEAA IDE++L +
Sbjct: 234 NSRGRRLMIARNEAEMSRGVKVIQDLERIRTTLEKETGRVVSLSTWAEAAGIDEKVLNQD 293
Query: 181 LHFGWYCRDKLLKSTRSLVLFLARNYRGVGISLEDLLQAGYMGVLLGAERYDHTRGYRFS 360
L +GWYCRD+LL+STRSLVL+LARNYRG+GI+ EDLLQAG +GVL GAER+DHTRGY+ S
Sbjct: 294 LRYGWYCRDELLRSTRSLVLYLARNYRGLGIASEDLLQAGKLGVLQGAERFDHTRGYKLS 353
Query: 361 TYVQYWIRKSMSAYVAQNSRGIQLPAT 441
TYVQYWIRKSMS VAQ++RG+Q+P T
Sbjct: 354 TYVQYWIRKSMSRMVAQHARGVQIPYT 380
>ref|XP_009757464.1| PREDICTED: RNA polymerase sigma factor sigC isoform X2 [Nicotiana
sylvestris]
Length = 554
Score = 217 bits (553), Expect = 2e-54
Identities = 104/145 (71%), Positives = 127/145 (87%)
Frame = +1
Query: 7 RSKRVIVAKNESEMSRGVKEVVNLERIRTMLEEETGRVASFKSWAEAARIDERLLKERLH 186
R+KR +AKNE+EMSRGVK V LERIR++LEEETGRVASF SWAEAA ++++ L+ LH
Sbjct: 253 RNKRQKIAKNEAEMSRGVKLVAELERIRSILEEETGRVASFSSWAEAAGVEQKELQHHLH 312
Query: 187 FGWYCRDKLLKSTRSLVLFLARNYRGVGISLEDLLQAGYMGVLLGAERYDHTRGYRFSTY 366
FGWYCRD+LLKSTRSLVL+LARNYRG+G++ EDL+QAG MGVL GA R+D TRGY+FSTY
Sbjct: 313 FGWYCRDELLKSTRSLVLYLARNYRGLGVAFEDLIQAGNMGVLQGAVRFDDTRGYKFSTY 372
Query: 367 VQYWIRKSMSAYVAQNSRGIQLPAT 441
VQYWIRKS+S VAQ++RGI++P T
Sbjct: 373 VQYWIRKSLSKLVAQHARGIRIPFT 397
>ref|XP_009757459.1| PREDICTED: RNA polymerase sigma factor sigC isoform X1 [Nicotiana
sylvestris]
Length = 584
Score = 217 bits (553), Expect = 2e-54
Identities = 104/145 (71%), Positives = 127/145 (87%)
Frame = +1
Query: 7 RSKRVIVAKNESEMSRGVKEVVNLERIRTMLEEETGRVASFKSWAEAARIDERLLKERLH 186
R+KR +AKNE+EMSRGVK V LERIR++LEEETGRVASF SWAEAA ++++ L+ LH
Sbjct: 283 RNKRQKIAKNEAEMSRGVKLVAELERIRSILEEETGRVASFSSWAEAAGVEQKELQHHLH 342
Query: 187 FGWYCRDKLLKSTRSLVLFLARNYRGVGISLEDLLQAGYMGVLLGAERYDHTRGYRFSTY 366
FGWYCRD+LLKSTRSLVL+LARNYRG+G++ EDL+QAG MGVL GA R+D TRGY+FSTY
Sbjct: 343 FGWYCRDELLKSTRSLVLYLARNYRGLGVAFEDLIQAGNMGVLQGAVRFDDTRGYKFSTY 402
Query: 367 VQYWIRKSMSAYVAQNSRGIQLPAT 441
VQYWIRKS+S VAQ++RGI++P T
Sbjct: 403 VQYWIRKSLSKLVAQHARGIRIPFT 427
>ref|XP_004245130.1| PREDICTED: RNA polymerase sigma factor sigC [Solanum lycopersicum]
Length = 551
Score = 216 bits (550), Expect = 5e-54
Identities = 101/145 (69%), Positives = 129/145 (88%)
Frame = +1
Query: 7 RSKRVIVAKNESEMSRGVKEVVNLERIRTMLEEETGRVASFKSWAEAARIDERLLKERLH 186
R+KR +AKNE+EMS+GVK V LERIR++LEEETG+VA+F SWA+AA I+++ L++ LH
Sbjct: 250 RTKRQKIAKNEAEMSKGVKLVAQLERIRSILEEETGQVATFSSWAKAAGIEQKELQQHLH 309
Query: 187 FGWYCRDKLLKSTRSLVLFLARNYRGVGISLEDLLQAGYMGVLLGAERYDHTRGYRFSTY 366
FGWYCRD+LLKSTRSLVL+LARNYRG+G++ EDL+QAG MGVL GA R+DHTRGY+FSTY
Sbjct: 310 FGWYCRDELLKSTRSLVLYLARNYRGLGVAFEDLIQAGNMGVLQGAVRFDHTRGYKFSTY 369
Query: 367 VQYWIRKSMSAYVAQNSRGIQLPAT 441
VQYWIRKS+S VAQ++RG+++P T
Sbjct: 370 VQYWIRKSLSKLVAQHARGVRIPFT 394
>ref|XP_013675845.1| PREDICTED: RNA polymerase sigma factor sigC-like [Brassica napus]
Length = 564
Score = 215 bits (548), Expect = 9e-54
Identities = 101/145 (69%), Positives = 127/145 (87%)
Frame = +1
Query: 7 RSKRVIVAKNESEMSRGVKEVVNLERIRTMLEEETGRVASFKSWAEAARIDERLLKERLH 186
R KR +++NESEMS+GVK V ++ERIRT LEEE+G+VAS WAEAA ++E+LL LH
Sbjct: 261 RKKRERISRNESEMSQGVKIVADMERIRTKLEEESGKVASMSCWAEAAGMNEKLLMRNLH 320
Query: 187 FGWYCRDKLLKSTRSLVLFLARNYRGVGISLEDLLQAGYMGVLLGAERYDHTRGYRFSTY 366
FGWYCRD+L+KSTRSLVLFLARNYRG+GI+ EDL+QAGY+GVL GAER+DHTRGY+FSTY
Sbjct: 321 FGWYCRDELVKSTRSLVLFLARNYRGLGIAHEDLIQAGYVGVLQGAERFDHTRGYKFSTY 380
Query: 367 VQYWIRKSMSAYVAQNSRGIQLPAT 441
VQYWIRKSMS V++++RG+ +PA+
Sbjct: 381 VQYWIRKSMSMMVSRHARGVHIPAS 405
>ref|XP_010047303.1| PREDICTED: RNA polymerase sigma factor sigC [Eucalyptus grandis]
gi|629114510|gb|KCW79185.1| hypothetical protein
EUGRSUZ_C00620 [Eucalyptus grandis]
Length = 556
Score = 215 bits (547), Expect = 1e-53
Identities = 99/147 (67%), Positives = 127/147 (86%)
Frame = +1
Query: 1 NKRSKRVIVAKNESEMSRGVKEVVNLERIRTMLEEETGRVASFKSWAEAARIDERLLKER 180
N + +R I+A+NE+EMSRGVK V LE++R +LEEE+G+V S ++WAEAA +DE +L++
Sbjct: 252 NSKRRRSIIARNEAEMSRGVKVVAELEKLRAILEEESGQVPSLRTWAEAAGVDENVLRQN 311
Query: 181 LHFGWYCRDKLLKSTRSLVLFLARNYRGVGISLEDLLQAGYMGVLLGAERYDHTRGYRFS 360
LHFGW+CRD+LL+STRSLV+FL RNYRG+GI+ EDL+QAG MGVL GAER+DHTRGYRFS
Sbjct: 312 LHFGWFCRDELLRSTRSLVIFLTRNYRGLGIAHEDLIQAGNMGVLRGAERFDHTRGYRFS 371
Query: 361 TYVQYWIRKSMSAYVAQNSRGIQLPAT 441
TYVQYWIRKSMS VA ++RGI++P T
Sbjct: 372 TYVQYWIRKSMSRMVAWHARGIRIPTT 398
>gb|KCW79184.1| hypothetical protein EUGRSUZ_C00620 [Eucalyptus grandis]
Length = 501
Score = 215 bits (547), Expect = 1e-53
Identities = 99/147 (67%), Positives = 127/147 (86%)
Frame = +1
Query: 1 NKRSKRVIVAKNESEMSRGVKEVVNLERIRTMLEEETGRVASFKSWAEAARIDERLLKER 180
N + +R I+A+NE+EMSRGVK V LE++R +LEEE+G+V S ++WAEAA +DE +L++
Sbjct: 252 NSKRRRSIIARNEAEMSRGVKVVAELEKLRAILEEESGQVPSLRTWAEAAGVDENVLRQN 311
Query: 181 LHFGWYCRDKLLKSTRSLVLFLARNYRGVGISLEDLLQAGYMGVLLGAERYDHTRGYRFS 360
LHFGW+CRD+LL+STRSLV+FL RNYRG+GI+ EDL+QAG MGVL GAER+DHTRGYRFS
Sbjct: 312 LHFGWFCRDELLRSTRSLVIFLTRNYRGLGIAHEDLIQAGNMGVLRGAERFDHTRGYRFS 371
Query: 361 TYVQYWIRKSMSAYVAQNSRGIQLPAT 441
TYVQYWIRKSMS VA ++RGI++P T
Sbjct: 372 TYVQYWIRKSMSRMVAWHARGIRIPTT 398
>ref|XP_007012219.1| RNApolymerase sigma-subunit C, putative [Theobroma cacao]
gi|508782582|gb|EOY29838.1| RNApolymerase sigma-subunit
C, putative [Theobroma cacao]
Length = 848
Score = 215 bits (547), Expect = 1e-53
Identities = 101/147 (68%), Positives = 127/147 (86%)
Frame = +1
Query: 1 NKRSKRVIVAKNESEMSRGVKEVVNLERIRTMLEEETGRVASFKSWAEAARIDERLLKER 180
+ RS+R+ +A+NE+EMS+GVK V NLERIRT LEEETGR AS WAEAA + E++L++
Sbjct: 544 DSRSRRLRIARNEAEMSKGVKVVANLERIRTTLEEETGRAASLSCWAEAAGVSEKVLQQH 603
Query: 181 LHFGWYCRDKLLKSTRSLVLFLARNYRGVGISLEDLLQAGYMGVLLGAERYDHTRGYRFS 360
L FGWYCRD+LL+STRSLVL+ ARNYRG+GI+ EDL+QAG +GVL GAER+DHTRGYRFS
Sbjct: 604 LRFGWYCRDELLRSTRSLVLYFARNYRGLGIAHEDLIQAGSLGVLQGAERFDHTRGYRFS 663
Query: 361 TYVQYWIRKSMSAYVAQNSRGIQLPAT 441
TYVQ+WIRKS+S VA+++RGIQ+P T
Sbjct: 664 TYVQFWIRKSVSRIVARHARGIQVPCT 690
>ref|XP_002877947.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297323785|gb|EFH54206.1| predicted protein
[Arabidopsis lyrata subsp. lyrata]
Length = 568
Score = 214 bits (544), Expect = 3e-53
Identities = 100/145 (68%), Positives = 126/145 (86%)
Frame = +1
Query: 7 RSKRVIVAKNESEMSRGVKEVVNLERIRTMLEEETGRVASFKSWAEAARIDERLLKERLH 186
R KR ++KNE+EMS GVK V ++ERIRT LEEE+G+VAS WAEAA ++E+LL LH
Sbjct: 265 RKKRERISKNEAEMSTGVKIVADMERIRTQLEEESGKVASLSCWAEAAGMNEKLLMRNLH 324
Query: 187 FGWYCRDKLLKSTRSLVLFLARNYRGVGISLEDLLQAGYMGVLLGAERYDHTRGYRFSTY 366
+GWYCRD+LLKSTRSLVLFLARNYRG+GI+ EDL+QAGY+GVL GAER+DHTRGY+FSTY
Sbjct: 325 YGWYCRDELLKSTRSLVLFLARNYRGLGIAHEDLIQAGYVGVLQGAERFDHTRGYKFSTY 384
Query: 367 VQYWIRKSMSAYVAQNSRGIQLPAT 441
VQYWIRKSMS V++++RG+ +P++
Sbjct: 385 VQYWIRKSMSMMVSRHARGVHIPSS 409
>ref|XP_010427052.1| PREDICTED: RNA polymerase sigma factor sigC-like isoform X2
[Camelina sativa]
Length = 563
Score = 213 bits (543), Expect = 3e-53
Identities = 100/145 (68%), Positives = 126/145 (86%)
Frame = +1
Query: 7 RSKRVIVAKNESEMSRGVKEVVNLERIRTMLEEETGRVASFKSWAEAARIDERLLKERLH 186
R KR +++NE+EMS GVK V ++ERIRT LEEE+G+VAS WAEAA ++E+LL LH
Sbjct: 260 RKKRERISRNEAEMSTGVKIVADMERIRTQLEEESGKVASLSCWAEAAGMNEKLLMRNLH 319
Query: 187 FGWYCRDKLLKSTRSLVLFLARNYRGVGISLEDLLQAGYMGVLLGAERYDHTRGYRFSTY 366
+GWYCRD+LLKSTRSLVLFLARNYRG+GI+ EDL+QAGY+GVL GAER+DHTRGY+FSTY
Sbjct: 320 YGWYCRDELLKSTRSLVLFLARNYRGLGIAHEDLVQAGYVGVLQGAERFDHTRGYKFSTY 379
Query: 367 VQYWIRKSMSAYVAQNSRGIQLPAT 441
VQYWIRKSMS V++++RG+ +PA+
Sbjct: 380 VQYWIRKSMSMMVSRHARGVHIPAS 404
>ref|XP_010427051.1| PREDICTED: RNA polymerase sigma factor sigC-like isoform X1
[Camelina sativa]
Length = 572
Score = 213 bits (543), Expect = 3e-53
Identities = 100/145 (68%), Positives = 126/145 (86%)
Frame = +1
Query: 7 RSKRVIVAKNESEMSRGVKEVVNLERIRTMLEEETGRVASFKSWAEAARIDERLLKERLH 186
R KR +++NE+EMS GVK V ++ERIRT LEEE+G+VAS WAEAA ++E+LL LH
Sbjct: 269 RKKRERISRNEAEMSTGVKIVADMERIRTQLEEESGKVASLSCWAEAAGMNEKLLMRNLH 328
Query: 187 FGWYCRDKLLKSTRSLVLFLARNYRGVGISLEDLLQAGYMGVLLGAERYDHTRGYRFSTY 366
+GWYCRD+LLKSTRSLVLFLARNYRG+GI+ EDL+QAGY+GVL GAER+DHTRGY+FSTY
Sbjct: 329 YGWYCRDELLKSTRSLVLFLARNYRGLGIAHEDLVQAGYVGVLQGAERFDHTRGYKFSTY 388
Query: 367 VQYWIRKSMSAYVAQNSRGIQLPAT 441
VQYWIRKSMS V++++RG+ +PA+
Sbjct: 389 VQYWIRKSMSMMVSRHARGVHIPAS 413
>ref|XP_010504173.1| PREDICTED: RNA polymerase sigma factor sigC isoform X5 [Camelina
sativa]
Length = 499
Score = 213 bits (543), Expect = 3e-53
Identities = 100/145 (68%), Positives = 126/145 (86%)
Frame = +1
Query: 7 RSKRVIVAKNESEMSRGVKEVVNLERIRTMLEEETGRVASFKSWAEAARIDERLLKERLH 186
R KR +++NE+EMS GVK V ++ERIRT LEEE+G+VAS WAEAA ++E+LL LH
Sbjct: 196 RKKRERISRNEAEMSTGVKIVADMERIRTQLEEESGKVASLSCWAEAAGMNEKLLMRNLH 255
Query: 187 FGWYCRDKLLKSTRSLVLFLARNYRGVGISLEDLLQAGYMGVLLGAERYDHTRGYRFSTY 366
+GWYCRD+LLKSTRSLVLFLARNYRG+GI+ EDL+QAGY+GVL GAER+DHTRGY+FSTY
Sbjct: 256 YGWYCRDELLKSTRSLVLFLARNYRGLGIAHEDLVQAGYVGVLQGAERFDHTRGYKFSTY 315
Query: 367 VQYWIRKSMSAYVAQNSRGIQLPAT 441
VQYWIRKSMS V++++RG+ +PA+
Sbjct: 316 VQYWIRKSMSMMVSRHARGVHIPAS 340
>ref|XP_010504172.1| PREDICTED: RNA polymerase sigma factor sigC isoform X4 [Camelina
sativa]
Length = 560
Score = 213 bits (543), Expect = 3e-53
Identities = 100/145 (68%), Positives = 126/145 (86%)
Frame = +1
Query: 7 RSKRVIVAKNESEMSRGVKEVVNLERIRTMLEEETGRVASFKSWAEAARIDERLLKERLH 186
R KR +++NE+EMS GVK V ++ERIRT LEEE+G+VAS WAEAA ++E+LL LH
Sbjct: 257 RKKRERISRNEAEMSTGVKIVADMERIRTQLEEESGKVASLSCWAEAAGMNEKLLMRNLH 316
Query: 187 FGWYCRDKLLKSTRSLVLFLARNYRGVGISLEDLLQAGYMGVLLGAERYDHTRGYRFSTY 366
+GWYCRD+LLKSTRSLVLFLARNYRG+GI+ EDL+QAGY+GVL GAER+DHTRGY+FSTY
Sbjct: 317 YGWYCRDELLKSTRSLVLFLARNYRGLGIAHEDLVQAGYVGVLQGAERFDHTRGYKFSTY 376
Query: 367 VQYWIRKSMSAYVAQNSRGIQLPAT 441
VQYWIRKSMS V++++RG+ +PA+
Sbjct: 377 VQYWIRKSMSMMVSRHARGVHIPAS 401
>ref|XP_010504171.1| PREDICTED: RNA polymerase sigma factor sigC isoform X3 [Camelina
sativa]
Length = 569
Score = 213 bits (543), Expect = 3e-53
Identities = 100/145 (68%), Positives = 126/145 (86%)
Frame = +1
Query: 7 RSKRVIVAKNESEMSRGVKEVVNLERIRTMLEEETGRVASFKSWAEAARIDERLLKERLH 186
R KR +++NE+EMS GVK V ++ERIRT LEEE+G+VAS WAEAA ++E+LL LH
Sbjct: 266 RKKRERISRNEAEMSTGVKIVADMERIRTQLEEESGKVASLSCWAEAAGMNEKLLMRNLH 325
Query: 187 FGWYCRDKLLKSTRSLVLFLARNYRGVGISLEDLLQAGYMGVLLGAERYDHTRGYRFSTY 366
+GWYCRD+LLKSTRSLVLFLARNYRG+GI+ EDL+QAGY+GVL GAER+DHTRGY+FSTY
Sbjct: 326 YGWYCRDELLKSTRSLVLFLARNYRGLGIAHEDLVQAGYVGVLQGAERFDHTRGYKFSTY 385
Query: 367 VQYWIRKSMSAYVAQNSRGIQLPAT 441
VQYWIRKSMS V++++RG+ +PA+
Sbjct: 386 VQYWIRKSMSMMVSRHARGVHIPAS 410