BLASTX nr result

ID: Papaver29_contig00028604 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver29_contig00028604
         (1436 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006348862.1| PREDICTED: F-box protein At3g07870-like isof...    49   2e-07
ref|XP_006348865.1| PREDICTED: F-box protein At3g07870-like isof...    49   2e-07

>ref|XP_006348862.1| PREDICTED: F-box protein At3g07870-like isoform X1 [Solanum
            tuberosum] gi|565364298|ref|XP_006348863.1| PREDICTED:
            F-box protein At3g07870-like isoform X2 [Solanum
            tuberosum] gi|565364300|ref|XP_006348864.1| PREDICTED:
            F-box protein At3g07870-like isoform X3 [Solanum
            tuberosum]
          Length = 464

 Score = 48.9 bits (115), Expect(2) = 2e-07
 Identities = 25/70 (35%), Positives = 42/70 (60%)
 Frame = -2

Query: 1366 SSYLPEELMIESILTRLPARTLAVCCCVSKLWYNSILNDSRFSVIHYNQNKNKPILVFNL 1187
            S YLPEEL+++ I T+LP +++  C  V K WY S+L    F+  H N+ ++  +L+ N 
Sbjct: 2    SDYLPEELLLD-IFTKLPVKSILRCRSVCKSWY-SLLTSPSFTFTHLNRKRDDHMLIRNY 59

Query: 1186 LNVSRAGDLF 1157
               +R  D++
Sbjct: 60   AKNTRRIDMY 69



 Score = 35.4 bits (80), Expect(2) = 2e-07
 Identities = 33/100 (33%), Positives = 46/100 (46%), Gaps = 9/100 (9%)
 Frame = -3

Query: 1119 FLSGQNARGIYEPVGYCNGLACVKLADSPIDTYGAITVLNPNKSESLIYSYVPPTVGYIY 940
            FL     RG    VG  NG+ C+   D+  DT   +   N +  +S+    +P  V   Y
Sbjct: 83   FLDFLFRRGSVSIVGSFNGILCLADTDTDTDTLTHLYFCNLSIRKSV---KLPEPV---Y 136

Query: 939  LCH---------GFGLDPLSQVYKPVIVFASKANSEVSLH 847
            LC+         GFG DP++  YK V V  +K +S VS H
Sbjct: 137  LCNDRNTFGYTLGFGFDPVTNDYKVVRVVHTKGHS-VSPH 175


>ref|XP_006348865.1| PREDICTED: F-box protein At3g07870-like isoform X4 [Solanum
            tuberosum]
          Length = 397

 Score = 48.9 bits (115), Expect(2) = 2e-07
 Identities = 25/70 (35%), Positives = 42/70 (60%)
 Frame = -2

Query: 1366 SSYLPEELMIESILTRLPARTLAVCCCVSKLWYNSILNDSRFSVIHYNQNKNKPILVFNL 1187
            S YLPEEL+++ I T+LP +++  C  V K WY S+L    F+  H N+ ++  +L+ N 
Sbjct: 2    SDYLPEELLLD-IFTKLPVKSILRCRSVCKSWY-SLLTSPSFTFTHLNRKRDDHMLIRNY 59

Query: 1186 LNVSRAGDLF 1157
               +R  D++
Sbjct: 60   AKNTRRIDMY 69



 Score = 35.4 bits (80), Expect(2) = 2e-07
 Identities = 33/100 (33%), Positives = 46/100 (46%), Gaps = 9/100 (9%)
 Frame = -3

Query: 1119 FLSGQNARGIYEPVGYCNGLACVKLADSPIDTYGAITVLNPNKSESLIYSYVPPTVGYIY 940
            FL     RG    VG  NG+ C+   D+  DT   +   N +  +S+    +P  V   Y
Sbjct: 83   FLDFLFRRGSVSIVGSFNGILCLADTDTDTDTLTHLYFCNLSIRKSV---KLPEPV---Y 136

Query: 939  LCH---------GFGLDPLSQVYKPVIVFASKANSEVSLH 847
            LC+         GFG DP++  YK V V  +K +S VS H
Sbjct: 137  LCNDRNTFGYTLGFGFDPVTNDYKVVRVVHTKGHS-VSPH 175


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