BLASTX nr result
ID: Papaver29_contig00027225
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Papaver29_contig00027225
(1942 letters)
Database: ./nr
77,306,371 sequences; 28,104,191,420 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|KOM42591.1| hypothetical protein LR48_Vigan05g019500 [Vigna a... 1140 0.0
ref|XP_014500879.1| PREDICTED: U5 small nuclear ribonucleoprotei... 1140 0.0
ref|XP_009337975.1| PREDICTED: U5 small nuclear ribonucleoprotei... 1140 0.0
ref|XP_002518663.1| U520, putative [Ricinus communis] gi|2235420... 1137 0.0
ref|XP_008370796.1| PREDICTED: U5 small nuclear ribonucleoprotei... 1135 0.0
ref|XP_007010915.1| U5 small nuclear ribonucleoprotein helicase,... 1135 0.0
ref|XP_007010914.1| U5 small nuclear ribonucleoprotein helicase,... 1135 0.0
ref|XP_012073544.1| PREDICTED: U5 small nuclear ribonucleoprotei... 1134 0.0
gb|KHG18677.1| U5 small nuclear ribonucleoprotein helicase [Goss... 1133 0.0
ref|XP_009346826.1| PREDICTED: U5 small nuclear ribonucleoprotei... 1132 0.0
ref|XP_008388784.1| PREDICTED: U5 small nuclear ribonucleoprotei... 1132 0.0
ref|XP_004488845.1| PREDICTED: U5 small nuclear ribonucleoprotei... 1132 0.0
ref|XP_006598183.1| PREDICTED: U5 small nuclear ribonucleoprotei... 1130 0.0
gb|KJB73065.1| hypothetical protein B456_011G217300 [Gossypium r... 1130 0.0
ref|XP_012454175.1| PREDICTED: U5 small nuclear ribonucleoprotei... 1130 0.0
ref|XP_002266580.1| PREDICTED: U5 small nuclear ribonucleoprotei... 1129 0.0
emb|CAN75158.1| hypothetical protein VITISV_042645 [Vitis vinifera] 1129 0.0
ref|XP_003595992.2| U5 small nuclear ribonucleoprotein 200 kDa h... 1129 0.0
gb|KHN26799.1| U5 small nuclear ribonucleoprotein 200 kDa helica... 1128 0.0
ref|XP_010270595.1| PREDICTED: U5 small nuclear ribonucleoprotei... 1128 0.0
>gb|KOM42591.1| hypothetical protein LR48_Vigan05g019500 [Vigna angularis]
Length = 2184
Score = 1140 bits (2950), Expect = 0.0
Identities = 567/672 (84%), Positives = 609/672 (90%), Gaps = 25/672 (3%)
Frame = -1
Query: 1942 GVNLPAHTVIIKGTQIYNPEKGAWTELSPLDVMQMLGRAGRPQYDTYGEGIIITGHSELQ 1763
GVNLPAHTVIIKGTQIYNPEKGAWTELSPLDVMQMLGRAGRPQYD+YGEGII+TGHSELQ
Sbjct: 854 GVNLPAHTVIIKGTQIYNPEKGAWTELSPLDVMQMLGRAGRPQYDSYGEGIIVTGHSELQ 913
Query: 1762 YYLSLMNAQLPIESQFVSKLADQLNAEIVLGTVQNAKEACNWLGYTYLYIRMLRNPTLYG 1583
YYLSLMN QLPIESQFVSKLADQLNAEIVLGTVQNA+EACNW+GYTYLY+RMLRNP+LYG
Sbjct: 914 YYLSLMNQQLPIESQFVSKLADQLNAEIVLGTVQNAREACNWIGYTYLYVRMLRNPSLYG 973
Query: 1582 LAADVLSRDKLLEERRADLIHSAATVLEKNNLVKYDRKSGYFQVTDLGRIASYYYITHGT 1403
+A D+L+RD LEERRADLIH+AAT+L++NNLVKYDRKSGYFQVTDLGRIASYYYITHGT
Sbjct: 974 IAPDILTRDITLEERRADLIHTAATILDRNNLVKYDRKSGYFQVTDLGRIASYYYITHGT 1033
Query: 1402 ISTYNEHLKPTMGDIELCRLFSLSEEFKYVTVRQDEKMELAKLLDRVPIPVKESLEEPSA 1223
ISTYNEHLKPTMGDIELCRLFSLSEEFKYVTVRQDEKMELAKLLDRVPIP+KESLEEPSA
Sbjct: 1034 ISTYNEHLKPTMGDIELCRLFSLSEEFKYVTVRQDEKMELAKLLDRVPIPIKESLEEPSA 1093
Query: 1222 KINVLLQAYISQLKLEGLSLTSDMVFITQSAGRLMRALFEIVLKRGWAQVAEKALNLCKM 1043
KINVLLQAYISQLKLEGLSLTSDMVFITQSAGRL+RALFEIVLKRGWAQ+AEKALNLCKM
Sbjct: 1094 KINVLLQAYISQLKLEGLSLTSDMVFITQSAGRLLRALFEIVLKRGWAQLAEKALNLCKM 1153
Query: 1042 VGKQMWSVQMPLRQFHGIQKDLLTKLERKELAWDRYYDLTSTEIGELIRQQKVGKMLHKY 863
V K+MWSVQ PLRQF+GI DLLTKLE+K+LAW+RYYDL+S EIGELIR K+G+ LHK+
Sbjct: 1154 VTKRMWSVQTPLRQFNGIPSDLLTKLEKKDLAWERYYDLSSQEIGELIRAPKMGRTLHKF 1213
Query: 862 IHQFPKLNLAAHVQPITRTVLRVELTITPDFMWEDRVHG--------------------- 746
IHQFPKLNLAAHVQPITRTVLRVELTITPDF W+DR+HG
Sbjct: 1214 IHQFPKLNLAAHVQPITRTVLRVELTITPDFAWDDRIHGYVEPFWVIVEDNDGEYILHHE 1273
Query: 745 ----XXXXXXEDHTLSFTVPIYEPLPPQYFIRVVSDKWLNSQSVLPVSFRHLILPEKYPP 578
EDHTL+FTVPIYEPLPPQYFI VVSDKWL SQ+VLPVSFRHLILPEKYPP
Sbjct: 1274 YFMLKKQYIDEDHTLNFTVPIYEPLPPQYFIHVVSDKWLGSQTVLPVSFRHLILPEKYPP 1333
Query: 577 PTELLDLQPLPVTALRNPAYEALYQEFKHFNPVQTQVFTVLYNTDDNVLVAAPTGSGKTI 398
PTELLDLQPLPVTALRNP+YEALYQ+FKHFNPVQTQVFTVLYN+DDNVLVAAPTGSGKTI
Sbjct: 1334 PTELLDLQPLPVTALRNPSYEALYQDFKHFNPVQTQVFTVLYNSDDNVLVAAPTGSGKTI 1393
Query: 397 CAEFAVLRNHQKGSNNVMRVVYIAPMEALAKESYRDWERKFGKGLGLRVVELTGETSTDL 218
CAEFAVLRNHQKG ++VMRVVY+AP+EALAKE YRDWERKFG GL LRVVELTGET+TDL
Sbjct: 1394 CAEFAVLRNHQKGPDSVMRVVYVAPIEALAKERYRDWERKFGNGLKLRVVELTGETATDL 1453
Query: 217 KLLEKGQIVISTPEKWDSLSRRWKHRKHIQQVSLFVIDEXXXXXXXXXXXLEVIVSRMRY 38
KLLEKGQI+ISTPEKWD+LSRRWK RKH+QQVSLF+IDE LEV+VSRMRY
Sbjct: 1454 KLLEKGQIIISTPEKWDALSRRWKQRKHVQQVSLFIIDELHLIGGQGGPVLEVVVSRMRY 1513
Query: 37 IASQSENKIRIV 2
IASQ ENKIRIV
Sbjct: 1514 IASQVENKIRIV 1525
Score = 162 bits (410), Expect = 1e-36
Identities = 106/381 (27%), Positives = 191/381 (50%), Gaps = 8/381 (2%)
Frame = -1
Query: 1942 GVNLPAHTVIIKGTQIYNPEKGAWTELSPLDVMQMLGRAGRPQYDTYGEGIIITGHSELQ 1763
GV L AH V++ GTQ Y+ + A T+ D++QM+G A RP D G+ +I+ +
Sbjct: 1691 GVTLSAHLVVVMGTQYYDGRENAQTDYPVTDLLQMMGHASRPLVDNSGKCVILCHAPRKE 1750
Query: 1762 YYLSLMNAQLPIESQFVSKLADQLNAEIVLGTVQNAKEACNWLGYTYLYIRMLRNPTLYG 1583
YY + P+ES L D LNAEIV G ++N ++A ++L +T++Y R+ +NP Y
Sbjct: 1751 YYKKFLYEAFPVESHLHHFLHDNLNAEIVAGIIENKQDAVDYLTWTFMYRRLTQNPNYYN 1810
Query: 1582 LAADVLSRDKLLEERRADLIHSAATVLEKNNLVKYDRKSGYFQVTDLGRIASYYYITHGT 1403
L + L + ++++ + + LE + + + +LG IASYYYI++ T
Sbjct: 1811 LQG---VSHRHLSDHLSEMVENTLSDLEASKCMTIEDDMD-LSPLNLGMIASYYYISYTT 1866
Query: 1402 ISTYNEHLKPTMGDIELCRLFSLSEEFKYVTVRQDEKMELAKLLDRVPIPVKE-SLEEPS 1226
I ++ + L + S + E+ + +R E+ + KL++ + + +P
Sbjct: 1867 IERFSSSVTSKTKMKGLLEILSSASEYAQLPIRPGEEEVVRKLINHQRFSFENPKVTDPH 1926
Query: 1225 AKINVLLQAYISQLKLEGLSLTSDMVFITQSAGRLMRALFEIVLKRGWAQVAEKALNLCK 1046
K N LLQA+ S+ + G +L D + SA RL++A+ +++ GW +A + + +
Sbjct: 1927 VKANALLQAHFSR-QFVGGNLALDQKEVLLSANRLLQAMVDVISSNGWLSLALLTMEVSQ 1985
Query: 1045 MVGKQMWSVQMPLRQFHGIQKDLLTKL-ERKELAWDRYYDLTSTEIGELIRQQKVGKM-- 875
MV + MW L Q KDL K + + + +DL E E R++ +G
Sbjct: 1986 MVTQGMWERDSMLLQLPHFTKDLAKKCQDNPGKSIETVFDLLEMEDDE--RRELLGMSDS 2043
Query: 874 ----LHKYIHQFPKLNLAAHV 824
+ ++ ++FP ++L+ V
Sbjct: 2044 ELLDIARFCNRFPNIDLSYEV 2064
Score = 94.0 bits (232), Expect = 4e-16
Identities = 65/201 (32%), Positives = 109/201 (54%), Gaps = 8/201 (3%)
Frame = -1
Query: 580 PPTELLDLQPLPVTALRNPAYEALYQEFKHFNPVQTQVFTVLYNTDDNVLVAAPTGSGKT 401
P +L+ + +P A PA++ + Q N VQ++V+ DN+L+ APTG+GKT
Sbjct: 492 PNEKLVKISSMPDWA--QPAFKGMTQ----LNRVQSKVYETALFKPDNLLLCAPTGAGKT 545
Query: 400 ICAEFAVL------RNHQKGS--NNVMRVVYIAPMEALAKESYRDWERKFGKGLGLRVVE 245
A +L RN + GS ++ ++VY+APM+AL E + + + ++V E
Sbjct: 546 NVAVLTILQQIARHRNPEDGSIDHSAYKIVYVAPMKALVAEVVGNLSNRLQE-YDVKVRE 604
Query: 244 LTGETSTDLKLLEKGQIVISTPEKWDSLSRRWKHRKHIQQVSLFVIDEXXXXXXXXXXXL 65
L+G+ S + +E+ QI+++TPEKWD ++R+ R + Q V L +IDE L
Sbjct: 605 LSGDQSLTRQQIEETQIIVTTPEKWDIITRKSGDRTYTQLVKLVIIDEIHLLHDNRGPVL 664
Query: 64 EVIVSRMRYIASQSENKIRIV 2
E IV+R +++ IR+V
Sbjct: 665 ESIVARTVRQIETTKDYIRLV 685
>ref|XP_014500879.1| PREDICTED: U5 small nuclear ribonucleoprotein 200 kDa helicase [Vigna
radiata var. radiata]
Length = 2184
Score = 1140 bits (2948), Expect = 0.0
Identities = 568/672 (84%), Positives = 609/672 (90%), Gaps = 25/672 (3%)
Frame = -1
Query: 1942 GVNLPAHTVIIKGTQIYNPEKGAWTELSPLDVMQMLGRAGRPQYDTYGEGIIITGHSELQ 1763
GVNLPAHTVIIKGTQIYNPEKGAWTELSPLDVMQMLGRAGRPQYD+YGEGII+TGHSELQ
Sbjct: 854 GVNLPAHTVIIKGTQIYNPEKGAWTELSPLDVMQMLGRAGRPQYDSYGEGIIVTGHSELQ 913
Query: 1762 YYLSLMNAQLPIESQFVSKLADQLNAEIVLGTVQNAKEACNWLGYTYLYIRMLRNPTLYG 1583
YYLSLMN QLPIESQFVSKLADQLNAEIVLGTVQNA+EACNW+GYTYLY+RMLRNP+LYG
Sbjct: 914 YYLSLMNQQLPIESQFVSKLADQLNAEIVLGTVQNAREACNWIGYTYLYVRMLRNPSLYG 973
Query: 1582 LAADVLSRDKLLEERRADLIHSAATVLEKNNLVKYDRKSGYFQVTDLGRIASYYYITHGT 1403
+A DVL+RD LEERRADLIH+AAT+L++NNLVKYDRKSGYFQVTDLGRIASYYYITHGT
Sbjct: 974 IAPDVLTRDITLEERRADLIHTAATILDRNNLVKYDRKSGYFQVTDLGRIASYYYITHGT 1033
Query: 1402 ISTYNEHLKPTMGDIELCRLFSLSEEFKYVTVRQDEKMELAKLLDRVPIPVKESLEEPSA 1223
ISTYNEHLKPTMGDIELCRLFSLSEEFKYVTVRQDEKMELAKLLDRVPIP+KESLEEPSA
Sbjct: 1034 ISTYNEHLKPTMGDIELCRLFSLSEEFKYVTVRQDEKMELAKLLDRVPIPIKESLEEPSA 1093
Query: 1222 KINVLLQAYISQLKLEGLSLTSDMVFITQSAGRLMRALFEIVLKRGWAQVAEKALNLCKM 1043
KINVLLQAYISQLKLEGLSLTSDMVFITQSAGRL+RALFEIVLKRGWAQ+AEKALNLCKM
Sbjct: 1094 KINVLLQAYISQLKLEGLSLTSDMVFITQSAGRLLRALFEIVLKRGWAQLAEKALNLCKM 1153
Query: 1042 VGKQMWSVQMPLRQFHGIQKDLLTKLERKELAWDRYYDLTSTEIGELIRQQKVGKMLHKY 863
V K+MWSVQ PLRQF+GI DLLTKLE+K+LAW+RYYDL+S EIGELIR K+G+ LHK+
Sbjct: 1154 VTKRMWSVQTPLRQFNGIPSDLLTKLEKKDLAWERYYDLSSQEIGELIRAPKMGRTLHKF 1213
Query: 862 IHQFPKLNLAAHVQPITRTVLRVELTITPDFMWEDRVHG--------------------- 746
IHQFPKLNLAAHVQPITRTVLRVELTITPDF W+DR+HG
Sbjct: 1214 IHQFPKLNLAAHVQPITRTVLRVELTITPDFAWDDRIHGYVEPFWVIVEDNDGEYILHHE 1273
Query: 745 ----XXXXXXEDHTLSFTVPIYEPLPPQYFIRVVSDKWLNSQSVLPVSFRHLILPEKYPP 578
EDHTL+FTVPIYEPLPPQYFI VVSDKWL SQ+VLPVSFRHLILPEKYPP
Sbjct: 1274 YFMLKKQYIDEDHTLNFTVPIYEPLPPQYFIHVVSDKWLGSQTVLPVSFRHLILPEKYPP 1333
Query: 577 PTELLDLQPLPVTALRNPAYEALYQEFKHFNPVQTQVFTVLYNTDDNVLVAAPTGSGKTI 398
PTELLDLQPLPVTALRNP+YEALYQ+FKHFNPVQTQVFTVLYN+DDNVLVAAPTGSGKTI
Sbjct: 1334 PTELLDLQPLPVTALRNPSYEALYQDFKHFNPVQTQVFTVLYNSDDNVLVAAPTGSGKTI 1393
Query: 397 CAEFAVLRNHQKGSNNVMRVVYIAPMEALAKESYRDWERKFGKGLGLRVVELTGETSTDL 218
CAEFAVLRNHQKG ++VMRVVY+AP+EALAKE YRDWERKFG GL LRVVELTGET+TDL
Sbjct: 1394 CAEFAVLRNHQKGPDSVMRVVYVAPIEALAKERYRDWERKFGIGLKLRVVELTGETATDL 1453
Query: 217 KLLEKGQIVISTPEKWDSLSRRWKHRKHIQQVSLFVIDEXXXXXXXXXXXLEVIVSRMRY 38
KLLEKGQI+ISTPEKWD+LSRRWK RKH+QQVSLF+IDE LEV+VSRMRY
Sbjct: 1454 KLLEKGQIIISTPEKWDALSRRWKQRKHVQQVSLFIIDELHLIGGQGGPVLEVVVSRMRY 1513
Query: 37 IASQSENKIRIV 2
IASQ ENKIRIV
Sbjct: 1514 IASQVENKIRIV 1525
Score = 163 bits (412), Expect = 6e-37
Identities = 106/381 (27%), Positives = 191/381 (50%), Gaps = 8/381 (2%)
Frame = -1
Query: 1942 GVNLPAHTVIIKGTQIYNPEKGAWTELSPLDVMQMLGRAGRPQYDTYGEGIIITGHSELQ 1763
GV L AH V++ GTQ Y+ + A T+ D++QM+G A RP D G+ +I+ +
Sbjct: 1691 GVTLSAHLVVVMGTQYYDGRENAQTDYPVTDLLQMMGHASRPLVDNSGKCVILCHAPRKE 1750
Query: 1762 YYLSLMNAQLPIESQFVSKLADQLNAEIVLGTVQNAKEACNWLGYTYLYIRMLRNPTLYG 1583
YY + P+ES L D LNAEIV G ++N ++A ++L +T++Y R+ +NP Y
Sbjct: 1751 YYKKFLYEAFPVESHLHHFLHDNLNAEIVAGIIENKQDAVDYLTWTFMYRRLTQNPNYYN 1810
Query: 1582 LAADVLSRDKLLEERRADLIHSAATVLEKNNLVKYDRKSGYFQVTDLGRIASYYYITHGT 1403
L + L + ++++ + + LE + + + +LG IASYYYI++ T
Sbjct: 1811 LQG---VSHRHLSDHLSEMVENTLSDLEASKCITIEDDMD-LSPLNLGMIASYYYISYTT 1866
Query: 1402 ISTYNEHLKPTMGDIELCRLFSLSEEFKYVTVRQDEKMELAKLLDRVPIPVKE-SLEEPS 1226
I ++ + L + S + E+ + +R E+ + KL++ + + +P
Sbjct: 1867 IERFSSSVTSKTKMKGLLEILSSASEYAQLPIRPGEEEVVRKLINHQRFSFENPKVTDPH 1926
Query: 1225 AKINVLLQAYISQLKLEGLSLTSDMVFITQSAGRLMRALFEIVLKRGWAQVAEKALNLCK 1046
K N LLQA+ S+ + G +L D + SA RL++A+ +++ GW +A + + +
Sbjct: 1927 VKANALLQAHFSR-QFVGGNLALDQKEVLLSANRLLQAMVDVISSNGWLSLALLTMEVSQ 1985
Query: 1045 MVGKQMWSVQMPLRQFHGIQKDLLTKL-ERKELAWDRYYDLTSTEIGELIRQQKVGKM-- 875
MV + MW L Q KDL K + + + +DL E E R++ +G
Sbjct: 1986 MVTQGMWERDSMLLQLPHFTKDLAKKCQDNPGKSIETVFDLLEMEDDE--RRELLGMSDS 2043
Query: 874 ----LHKYIHQFPKLNLAAHV 824
+ ++ ++FP ++L+ V
Sbjct: 2044 QLLDIARFCNRFPNIDLSYEV 2064
Score = 94.4 bits (233), Expect = 3e-16
Identities = 65/201 (32%), Positives = 109/201 (54%), Gaps = 8/201 (3%)
Frame = -1
Query: 580 PPTELLDLQPLPVTALRNPAYEALYQEFKHFNPVQTQVFTVLYNTDDNVLVAAPTGSGKT 401
P +L+ + +P A PA++ + Q N VQ++V+ DN+L+ APTG+GKT
Sbjct: 492 PNEKLVKISSMPDWA--QPAFKGMTQ----LNRVQSKVYETALFKPDNLLLCAPTGAGKT 545
Query: 400 ICAEFAVL------RNHQKGS--NNVMRVVYIAPMEALAKESYRDWERKFGKGLGLRVVE 245
A +L RN + GS ++ ++VY+APM+AL E + + + ++V E
Sbjct: 546 NVAVLTILQQIARHRNPEDGSIDHSAYKIVYVAPMKALVAEVVGNLSNRLQE-YDVKVRE 604
Query: 244 LTGETSTDLKLLEKGQIVISTPEKWDSLSRRWKHRKHIQQVSLFVIDEXXXXXXXXXXXL 65
L+G+ S + +E+ QI+++TPEKWD ++R+ R + Q V L +IDE L
Sbjct: 605 LSGDQSLTRQQIEETQIIVTTPEKWDIITRKSGDRTYTQLVKLLIIDEIHLLHDNRGPVL 664
Query: 64 EVIVSRMRYIASQSENKIRIV 2
E IV+R +++ IR+V
Sbjct: 665 ESIVARTVRQIETTKDYIRLV 685
>ref|XP_009337975.1| PREDICTED: U5 small nuclear ribonucleoprotein 200 kDa helicase-like
[Pyrus x bretschneideri]
Length = 2180
Score = 1140 bits (2948), Expect = 0.0
Identities = 568/672 (84%), Positives = 606/672 (90%), Gaps = 25/672 (3%)
Frame = -1
Query: 1942 GVNLPAHTVIIKGTQIYNPEKGAWTELSPLDVMQMLGRAGRPQYDTYGEGIIITGHSELQ 1763
GVNLPAHTVIIKGTQIY+PEKGAWTELSPLDVMQMLGRAGRPQYD+YGEGIIITGH+ELQ
Sbjct: 849 GVNLPAHTVIIKGTQIYDPEKGAWTELSPLDVMQMLGRAGRPQYDSYGEGIIITGHNELQ 908
Query: 1762 YYLSLMNAQLPIESQFVSKLADQLNAEIVLGTVQNAKEACNWLGYTYLYIRMLRNPTLYG 1583
YYLSLMN QLPIESQF+SKLADQLNAEIVLGTVQNA+EACNW+GYTYLY+RMLRNPTLYG
Sbjct: 909 YYLSLMNQQLPIESQFISKLADQLNAEIVLGTVQNAREACNWIGYTYLYVRMLRNPTLYG 968
Query: 1582 LAADVLSRDKLLEERRADLIHSAATVLEKNNLVKYDRKSGYFQVTDLGRIASYYYITHGT 1403
L ADVLSRD LEERRADLIHSAAT+L+KNNL+KYDRKSGYFQVTDLGRIASYYYITHGT
Sbjct: 969 LEADVLSRDITLEERRADLIHSAATILDKNNLIKYDRKSGYFQVTDLGRIASYYYITHGT 1028
Query: 1402 ISTYNEHLKPTMGDIELCRLFSLSEEFKYVTVRQDEKMELAKLLDRVPIPVKESLEEPSA 1223
ISTYNEHLKPTMGDIELCRLFSLSEEFKYVTVRQDEKMELAKLLDRVPIPVKESLEEPSA
Sbjct: 1029 ISTYNEHLKPTMGDIELCRLFSLSEEFKYVTVRQDEKMELAKLLDRVPIPVKESLEEPSA 1088
Query: 1222 KINVLLQAYISQLKLEGLSLTSDMVFITQSAGRLMRALFEIVLKRGWAQVAEKALNLCKM 1043
KINVLLQAYISQLKLEGLSLTSDMV+ITQSAGRL+RALFEIVLKRGWAQ+AEKALN+CKM
Sbjct: 1089 KINVLLQAYISQLKLEGLSLTSDMVYITQSAGRLLRALFEIVLKRGWAQLAEKALNMCKM 1148
Query: 1042 VGKQMWSVQMPLRQFHGIQKDLLTKLERKELAWDRYYDLTSTEIGELIRQQKVGKMLHKY 863
V K+MWSVQ PLRQF GI D+L KLE+K+LAWDRYYDL+S E+GELIR K+G+ LHK+
Sbjct: 1149 VNKKMWSVQTPLRQFTGISNDILMKLEKKDLAWDRYYDLSSQELGELIRMPKMGRTLHKF 1208
Query: 862 IHQFPKLNLAAHVQPITRTVLRVELTITPDFMWEDRVHG--------------------- 746
IHQFPKLNLAAHVQPITRTVLRVELTITPDF WED+VHG
Sbjct: 1209 IHQFPKLNLAAHVQPITRTVLRVELTITPDFQWEDKVHGYVEPFWVIVEDNDGEFVLHHE 1268
Query: 745 ----XXXXXXEDHTLSFTVPIYEPLPPQYFIRVVSDKWLNSQSVLPVSFRHLILPEKYPP 578
EDHTL+FTVPIYEPLPPQYFIRVVSD+WL SQ+VLPVSFRHLILPEKYPP
Sbjct: 1269 YFLLKKQYIDEDHTLNFTVPIYEPLPPQYFIRVVSDRWLGSQTVLPVSFRHLILPEKYPP 1328
Query: 577 PTELLDLQPLPVTALRNPAYEALYQEFKHFNPVQTQVFTVLYNTDDNVLVAAPTGSGKTI 398
PTELLDLQPLPVTALRNP YEALYQ+FKHFNPVQTQVFTVLYN+DDNVLVAAPTGSGKTI
Sbjct: 1329 PTELLDLQPLPVTALRNPLYEALYQDFKHFNPVQTQVFTVLYNSDDNVLVAAPTGSGKTI 1388
Query: 397 CAEFAVLRNHQKGSNNVMRVVYIAPMEALAKESYRDWERKFGKGLGLRVVELTGETSTDL 218
CAEFAVLRNHQKGS+NVMRVVYIAP+EALAKE YRDWE+KFGKGL LRV LTGET+TDL
Sbjct: 1389 CAEFAVLRNHQKGSDNVMRVVYIAPIEALAKERYRDWEKKFGKGLNLRVELLTGETATDL 1448
Query: 217 KLLEKGQIVISTPEKWDSLSRRWKHRKHIQQVSLFVIDEXXXXXXXXXXXLEVIVSRMRY 38
KLLEKGQI+ISTPEKWD+ SRRWK RKH+QQVSLF++DE LEVIVSRMRY
Sbjct: 1449 KLLEKGQIIISTPEKWDAFSRRWKQRKHVQQVSLFIVDELHLIGGQGGPILEVIVSRMRY 1508
Query: 37 IASQSENKIRIV 2
IASQ ENKIRIV
Sbjct: 1509 IASQPENKIRIV 1520
Score = 158 bits (399), Expect = 2e-35
Identities = 105/379 (27%), Positives = 187/379 (49%), Gaps = 6/379 (1%)
Frame = -1
Query: 1942 GVNLPAHTVIIKGTQIYNPEKGAWTELSPLDVMQMLGRAGRPQYDTYGEGIIITGHSELQ 1763
GV L AH V++ GTQ Y+ + T+ D++QM+G A RP D G+ +I+ +
Sbjct: 1687 GVPLSAHLVVVMGTQYYDGRENVHTDYPVTDLLQMMGHASRPLLDNSGKCVILCHAPRKE 1746
Query: 1762 YYLSLMNAQLPIESQFVSKLADQLNAEIVLGTVQNAKEACNWLGYTYLYIRMLRNPTLYG 1583
YY + P+ES L D LNAE+V G ++N ++A ++L +T+LY R+ +NP Y
Sbjct: 1747 YYKKFLYEAFPVESHLHHYLHDNLNAEVVAGIIENKQDAVDYLTWTFLYRRLTQNPNYYN 1806
Query: 1582 LAADVLSRDKLLEERRADLIHSAATVLEKNNLVKYDRKSGYFQVTDLGRIASYYYITHGT 1403
L + L + ++LI + + LE + V + +LG IASYYYI++ T
Sbjct: 1807 LQG---VTQRHLSDHLSELIENTLSDLEASKCVAIEDDMD-LSPLNLGMIASYYYISYTT 1862
Query: 1402 ISTYNEHLKPTMGDIELCRLFSLSEEFKYVTVRQDEKMELAKLLDRVPIPV-KESLEEPS 1226
I ++ L L + + + E+ + +R E+ + +L++ +P
Sbjct: 1863 IERFSSSLTSKTKMKGLLEILTHASEYSQLPIRPGEEEVVRRLINHQRFSFDNPKCTDPH 1922
Query: 1225 AKINVLLQAYISQLKLEGLSLTSDMVFITQSAGRLMRALFEIVLKRGWAQVAEKALNLCK 1046
K N LLQA+ ++ L G +L D + SA RL++A+ +++ GW +A A+ + +
Sbjct: 1923 VKANSLLQAHFARQPLGG-NLALDQREVILSASRLLQAMVDVISSNGWLSLAVLAMEVSQ 1981
Query: 1045 MVGKQMWSVQMPLRQFHGIQKDLLTKL-ERKELAWDRYYDLTSTEIGEL--IRQQKVGKM 875
MV + MW L Q K+L + E + + +DL + E + Q ++
Sbjct: 1982 MVTQGMWDRDSMLLQLPHFTKELAKRCQENPGKSIETVFDLVELDDDERRDLLQMSDSQL 2041
Query: 874 LH--KYIHQFPKLNLAAHV 824
L ++ ++FP +++ V
Sbjct: 2042 LDIARFCNRFPNIDMVYEV 2060
Score = 99.0 bits (245), Expect = 1e-17
Identities = 67/203 (33%), Positives = 110/203 (54%), Gaps = 8/203 (3%)
Frame = -1
Query: 586 YPPPTELLDLQPLPVTALRNPAYEALYQEFKHFNPVQTQVFTVLYNTDDNVLVAAPTGSG 407
+ P +L+++ +P A PA++ + Q N VQ++V+ DN+L+ APTG+G
Sbjct: 485 FNPDEKLVNISAMPEWA--QPAFKGMTQ----LNRVQSRVYETALFKADNILLCAPTGAG 538
Query: 406 KT------ICAEFAVLRNHQKGSNNVM--RVVYIAPMEALAKESYRDWERKFGKGLGLRV 251
KT I +FA+ N + GS N ++VY+APM+AL E + + K G+ V
Sbjct: 539 KTNVAVLTILQQFALNMNKEDGSINHSDYKIVYVAPMKALVAEVVGNLSNRL-KDYGVNV 597
Query: 250 VELTGETSTDLKLLEKGQIVISTPEKWDSLSRRWKHRKHIQQVSLFVIDEXXXXXXXXXX 71
EL+G+ + + +E+ QI+++TPEKWD ++R+ R + Q V L +IDE
Sbjct: 598 RELSGDQTLTRQQIEETQIIVTTPEKWDIITRKSGDRTYTQLVKLLIIDEIHLLHDNRGP 657
Query: 70 XLEVIVSRMRYIASQSENKIRIV 2
LE IV+R ++ IR+V
Sbjct: 658 VLESIVARTVRQIETMKDHIRLV 680
>ref|XP_002518663.1| U520, putative [Ricinus communis] gi|223542044|gb|EEF43588.1| U520,
putative [Ricinus communis]
Length = 1809
Score = 1137 bits (2941), Expect = 0.0
Identities = 567/672 (84%), Positives = 607/672 (90%), Gaps = 25/672 (3%)
Frame = -1
Query: 1942 GVNLPAHTVIIKGTQIYNPEKGAWTELSPLDVMQMLGRAGRPQYDTYGEGIIITGHSELQ 1763
GVNLPAHTVIIKGTQIYNPEKGAWTELSPLDVMQMLGRAGRPQYD+YGEGIIITGH+ELQ
Sbjct: 482 GVNLPAHTVIIKGTQIYNPEKGAWTELSPLDVMQMLGRAGRPQYDSYGEGIIITGHTELQ 541
Query: 1762 YYLSLMNAQLPIESQFVSKLADQLNAEIVLGTVQNAKEACNWLGYTYLYIRMLRNPTLYG 1583
YYLSLMN QLPIESQFVSKLADQLNAEIVLGTVQNA+EACNWLGYTYLYIRMLRNPTLYG
Sbjct: 542 YYLSLMNQQLPIESQFVSKLADQLNAEIVLGTVQNAREACNWLGYTYLYIRMLRNPTLYG 601
Query: 1582 LAADVLSRDKLLEERRADLIHSAATVLEKNNLVKYDRKSGYFQVTDLGRIASYYYITHGT 1403
LA DVL+RD LEERRADLIHS+AT+L+KNNLVKYDRKSGYFQVTDLGRIASYYYITHGT
Sbjct: 602 LAPDVLTRDITLEERRADLIHSSATILDKNNLVKYDRKSGYFQVTDLGRIASYYYITHGT 661
Query: 1402 ISTYNEHLKPTMGDIELCRLFSLSEEFKYVTVRQDEKMELAKLLDRVPIPVKESLEEPSA 1223
ISTYNEHLKPTMGDIELCRLFSLSEEFKYVTVRQDEKMELAKLLDRVPIP+KESLEEPSA
Sbjct: 662 ISTYNEHLKPTMGDIELCRLFSLSEEFKYVTVRQDEKMELAKLLDRVPIPIKESLEEPSA 721
Query: 1222 KINVLLQAYISQLKLEGLSLTSDMVFITQSAGRLMRALFEIVLKRGWAQVAEKALNLCKM 1043
KINVLLQAYISQLKLEGLSLTSDMVFITQSAGRL+RALFEIVLKRGWAQ+ EKALNLCKM
Sbjct: 722 KINVLLQAYISQLKLEGLSLTSDMVFITQSAGRLLRALFEIVLKRGWAQLTEKALNLCKM 781
Query: 1042 VGKQMWSVQMPLRQFHGIQKDLLTKLERKELAWDRYYDLTSTEIGELIRQQKVGKMLHKY 863
+ K+MWSVQ PLRQF+GI ++L KLE+K+LAW+RYYDL+S EIGELIR K+G+ LHK+
Sbjct: 782 INKRMWSVQTPLRQFNGIPNEILMKLEKKDLAWERYYDLSSQEIGELIRFPKMGRTLHKF 841
Query: 862 IHQFPKLNLAAHVQPITRTVLRVELTITPDFMWEDRVHG--------------------- 746
IHQFPKLNLAAHVQPITRTVLRVELTITPDF WED+VHG
Sbjct: 842 IHQFPKLNLAAHVQPITRTVLRVELTITPDFQWEDKVHGYVEPFWVIVEDNDGEYILHHE 901
Query: 745 ----XXXXXXEDHTLSFTVPIYEPLPPQYFIRVVSDKWLNSQSVLPVSFRHLILPEKYPP 578
EDHTL+FTVPIYEPLPPQYFIRVVSDKWL SQ+VLPVSFRHLILPEKYPP
Sbjct: 902 YFMLKKQYIDEDHTLNFTVPIYEPLPPQYFIRVVSDKWLGSQTVLPVSFRHLILPEKYPP 961
Query: 577 PTELLDLQPLPVTALRNPAYEALYQEFKHFNPVQTQVFTVLYNTDDNVLVAAPTGSGKTI 398
PTELLDLQPLPVTALRNP+YEALYQ+FKHFNPVQTQVFTVLYNTDDNVLVAAPTGSGKTI
Sbjct: 962 PTELLDLQPLPVTALRNPSYEALYQDFKHFNPVQTQVFTVLYNTDDNVLVAAPTGSGKTI 1021
Query: 397 CAEFAVLRNHQKGSNNVMRVVYIAPMEALAKESYRDWERKFGKGLGLRVVELTGETSTDL 218
CAEFA+LRNHQKG ++V R VYIAP+EA+AKE YRDWERKFG+GLG+RVVELTGET+TDL
Sbjct: 1022 CAEFAILRNHQKGPDSVTRAVYIAPLEAIAKERYRDWERKFGRGLGMRVVELTGETATDL 1081
Query: 217 KLLEKGQIVISTPEKWDSLSRRWKHRKHIQQVSLFVIDEXXXXXXXXXXXLEVIVSRMRY 38
KLLEK QI+ISTPEKWD+LSRRWK RK++QQVSLF+IDE LEVIVSRMRY
Sbjct: 1082 KLLEKSQIIISTPEKWDALSRRWKQRKYVQQVSLFIIDELHLIGGQGGPILEVIVSRMRY 1141
Query: 37 IASQSENKIRIV 2
IASQ ENKIRIV
Sbjct: 1142 IASQIENKIRIV 1153
Score = 162 bits (411), Expect = 8e-37
Identities = 106/379 (27%), Positives = 190/379 (50%), Gaps = 6/379 (1%)
Frame = -1
Query: 1942 GVNLPAHTVIIKGTQIYNPEKGAWTELSPLDVMQMLGRAGRPQYDTYGEGIIITGHSELQ 1763
GV L AH V++ GTQ Y+ + A T+ D++QM+G A RP D G+ +I+ +
Sbjct: 1320 GVPLAAHLVVVMGTQYYDGRENAHTDYPVTDLLQMMGHASRPLLDNSGKCVILCHAPRKE 1379
Query: 1762 YYLSLMNAQLPIESQFVSKLADQLNAEIVLGTVQNAKEACNWLGYTYLYIRMLRNPTLYG 1583
YY + P+ES L D NAE+V G ++N ++A ++L +T++Y R+ +NP Y
Sbjct: 1380 YYKKFLYEAFPVESHLHHFLHDNFNAEVVAGVIENKQDAVDYLTWTFMYRRLTQNPNYYN 1439
Query: 1582 LAADVLSRDKLLEERRADLIHSAATVLEKNNLVKYDRKSGYFQVTDLGRIASYYYITHGT 1403
L + L + ++L+ + + LE + V + +LG IASYYYI++ T
Sbjct: 1440 LQG---VSHRHLSDHLSELVENTLSDLEASKCVAIEEDMD-LSPLNLGMIASYYYISYTT 1495
Query: 1402 ISTYNEHLKPTMGDIELCRLFSLSEEFKYVTVRQDEKMELAKLLDRVPIPVKE-SLEEPS 1226
I ++ L L + + + E+ + +R E+ L +L++ + +P
Sbjct: 1496 IERFSSSLTSKTRMKGLLEILASASEYAQLPIRPGEEEVLRRLINHQRFSFENPRYSDPH 1555
Query: 1225 AKINVLLQAYISQLKLEGLSLTSDMVFITQSAGRLMRALFEIVLKRGWAQVAEKALNLCK 1046
K NVLLQA+ S+ + G +L D + S+ RL++A+ +++ GW +A A+ + +
Sbjct: 1556 VKANVLLQAHFSRHSVGG-NLALDQREVLLSSSRLLQAMVDVISSNGWLSLALLAMEVSQ 1614
Query: 1045 MVGKQMWSVQMPLRQFHGIQKDLLTKL-ERKELAWDRYYDLTSTEIGEL--IRQQKVGKM 875
MV + MW L Q K+L K E + + +DL E E + Q ++
Sbjct: 1615 MVTQGMWERDSMLLQLPHFTKELAKKCQENPGKSIETVFDLVEMEDDERRELLQMSNSEL 1674
Query: 874 LH--KYIHQFPKLNLAAHV 824
L ++ ++FP ++++ V
Sbjct: 1675 LDVVRFCNRFPNIDMSYEV 1693
Score = 95.5 bits (236), Expect = 2e-16
Identities = 75/228 (32%), Positives = 119/228 (52%), Gaps = 20/228 (8%)
Frame = -1
Query: 625 LPV-SFRH-------LILPEKYPPPT----ELLDLQPLPVTALRNPAYEALYQEFKHFNP 482
LPV S+RH + +P P P +L+ + +P A PA++ + Q N
Sbjct: 93 LPVGSYRHTSKGYEEVHVPALKPRPIASDEKLVKISDMPGWA--QPAFKGMQQ----LNR 146
Query: 481 VQTQVFTVLYNTDDNVLVAAPTGSGKTICAEFAVLR------NHQKGSNNVM--RVVYIA 326
VQ++V+ DNVL+ APTG+GKT A +L+ N + GS N ++VY+A
Sbjct: 147 VQSRVYETALFKADNVLLCAPTGAGKTNVAVLTILQQLGLKMNKEDGSFNHSDYKIVYVA 206
Query: 325 PMEALAKESYRDWERKFGKGLGLRVVELTGETSTDLKLLEKGQIVISTPEKWDSLSRRWK 146
PM+AL E + + + G++V EL+G+ S + +E+ QI+++TPEKWD ++R+
Sbjct: 207 PMKALVAEVVGNLSNRLQE-YGVKVRELSGDQSLTRQQIEETQIIVTTPEKWDIITRKSG 265
Query: 145 HRKHIQQVSLFVIDEXXXXXXXXXXXLEVIVSRMRYIASQSENKIRIV 2
R + Q V L +IDE LE IV+R ++ IR+V
Sbjct: 266 DRTYTQLVKLLIIDEIHLLHDNRGPVLESIVARTVRQIETTKEHIRLV 313
>ref|XP_008370796.1| PREDICTED: U5 small nuclear ribonucleoprotein 200 kDa helicase-like
[Malus domestica]
Length = 2180
Score = 1135 bits (2937), Expect = 0.0
Identities = 567/672 (84%), Positives = 605/672 (90%), Gaps = 25/672 (3%)
Frame = -1
Query: 1942 GVNLPAHTVIIKGTQIYNPEKGAWTELSPLDVMQMLGRAGRPQYDTYGEGIIITGHSELQ 1763
GVNLPAHTVIIKGTQIY+PEKGAWTELSPLDVMQMLGRAGRPQ D+YGEGIIITGH+ELQ
Sbjct: 849 GVNLPAHTVIIKGTQIYDPEKGAWTELSPLDVMQMLGRAGRPQXDSYGEGIIITGHNELQ 908
Query: 1762 YYLSLMNAQLPIESQFVSKLADQLNAEIVLGTVQNAKEACNWLGYTYLYIRMLRNPTLYG 1583
YYLSLMN QLPIESQF+SKLADQLNAEIVLGTVQNA+EACNW+GYTYLY+RMLRNPTLYG
Sbjct: 909 YYLSLMNQQLPIESQFISKLADQLNAEIVLGTVQNAREACNWIGYTYLYVRMLRNPTLYG 968
Query: 1582 LAADVLSRDKLLEERRADLIHSAATVLEKNNLVKYDRKSGYFQVTDLGRIASYYYITHGT 1403
L ADVLSRD LEERRADLIHSAAT+L+KNNL+KYDRKSGYFQVTDLGRIASYYYITHGT
Sbjct: 969 LEADVLSRDITLEERRADLIHSAATILDKNNLIKYDRKSGYFQVTDLGRIASYYYITHGT 1028
Query: 1402 ISTYNEHLKPTMGDIELCRLFSLSEEFKYVTVRQDEKMELAKLLDRVPIPVKESLEEPSA 1223
ISTYNEHLKPTMGDIELCRLFSLSEEFKYVTVRQDEKMELAKLLDRVPIPVKESLEEPSA
Sbjct: 1029 ISTYNEHLKPTMGDIELCRLFSLSEEFKYVTVRQDEKMELAKLLDRVPIPVKESLEEPSA 1088
Query: 1222 KINVLLQAYISQLKLEGLSLTSDMVFITQSAGRLMRALFEIVLKRGWAQVAEKALNLCKM 1043
KINVLLQAYISQLKLEGLSLTSDMV+ITQSAGRL+RALFEIVLKRGWAQ+AEKALN+CKM
Sbjct: 1089 KINVLLQAYISQLKLEGLSLTSDMVYITQSAGRLLRALFEIVLKRGWAQLAEKALNMCKM 1148
Query: 1042 VGKQMWSVQMPLRQFHGIQKDLLTKLERKELAWDRYYDLTSTEIGELIRQQKVGKMLHKY 863
V K+MWSVQ PLRQF GI D+L KLE+K+LAWDRYYDL+S E+GELIR K+G+ LHK+
Sbjct: 1149 VNKKMWSVQTPLRQFTGISNDILMKLEKKDLAWDRYYDLSSQELGELIRMPKMGRTLHKF 1208
Query: 862 IHQFPKLNLAAHVQPITRTVLRVELTITPDFMWEDRVHG--------------------- 746
IHQFPKLNLAAHVQPITRTVLRVELTITPDF WED+VHG
Sbjct: 1209 IHQFPKLNLAAHVQPITRTVLRVELTITPDFQWEDKVHGYVEPFWVIVEDNDGEFVLHHE 1268
Query: 745 ----XXXXXXEDHTLSFTVPIYEPLPPQYFIRVVSDKWLNSQSVLPVSFRHLILPEKYPP 578
EDHTL+FTVPIYEPLPPQYFIRVVSD+WL SQ+VLPVSFRHLILPEKYPP
Sbjct: 1269 YFLLKKQYIDEDHTLNFTVPIYEPLPPQYFIRVVSDRWLGSQTVLPVSFRHLILPEKYPP 1328
Query: 577 PTELLDLQPLPVTALRNPAYEALYQEFKHFNPVQTQVFTVLYNTDDNVLVAAPTGSGKTI 398
PTELLDLQPLPVTALRNP YEALYQ+FKHFNPVQTQVFTVLYN+DDNVLVAAPTGSGKTI
Sbjct: 1329 PTELLDLQPLPVTALRNPLYEALYQDFKHFNPVQTQVFTVLYNSDDNVLVAAPTGSGKTI 1388
Query: 397 CAEFAVLRNHQKGSNNVMRVVYIAPMEALAKESYRDWERKFGKGLGLRVVELTGETSTDL 218
CAEFA+LRNHQKGS+NVMRVVYIAP+EALAKE YRDWE+KFGKGL RV LTGET+TDL
Sbjct: 1389 CAEFALLRNHQKGSDNVMRVVYIAPIEALAKERYRDWEKKFGKGLNXRVELLTGETATDL 1448
Query: 217 KLLEKGQIVISTPEKWDSLSRRWKHRKHIQQVSLFVIDEXXXXXXXXXXXLEVIVSRMRY 38
KLLEKGQI+ISTPEKWD+LSRRWK RKH+QQVSLF+IDE LEVIVSRMRY
Sbjct: 1449 KLLEKGQIIISTPEKWDALSRRWKQRKHVQQVSLFIIDELHLIGGQGGPILEVIVSRMRY 1508
Query: 37 IASQSENKIRIV 2
IASQ ENKIRIV
Sbjct: 1509 IASQPENKIRIV 1520
Score = 154 bits (390), Expect = 2e-34
Identities = 95/328 (28%), Positives = 164/328 (50%), Gaps = 1/328 (0%)
Frame = -1
Query: 1942 GVNLPAHTVIIKGTQIYNPEKGAWTELSPLDVMQMLGRAGRPQYDTYGEGIIITGHSELQ 1763
GV L AH V++ GTQ Y+ + T+ D++QM+G A RP D G+ +I+ +
Sbjct: 1687 GVPLSAHLVVVMGTQYYDGRENVHTDYPVTDLLQMMGHASRPLLDNSGKCVILCHAPRKE 1746
Query: 1762 YYLSLMNAQLPIESQFVSKLADQLNAEIVLGTVQNAKEACNWLGYTYLYIRMLRNPTLYG 1583
YY + P+ES L D LNAE+V G ++N ++A ++L +T+LY R+ +NP Y
Sbjct: 1747 YYKKFLYEAFPVESHLHHYLHDNLNAEVVAGIIENKQDAVDYLTWTFLYRRLTQNPNYYN 1806
Query: 1582 LAADVLSRDKLLEERRADLIHSAATVLEKNNLVKYDRKSGYFQVTDLGRIASYYYITHGT 1403
L + L + ++LI + + LE + V + +LG IASYYYI++ T
Sbjct: 1807 LQG---VTQRHLSDHLSELIENTLSDLEASKCVAIEDDMD-LSPLNLGMIASYYYISYTT 1862
Query: 1402 ISTYNEHLKPTMGDIELCRLFSLSEEFKYVTVRQDEKMELAKLLDRVPIPV-KESLEEPS 1226
I ++ L L + + + E+ + +R E+ + +L++ +P
Sbjct: 1863 IERFSSSLTSKTKMKGLLEILTHASEYSQLPIRPGEEEVVRRLINHQRFSFDNPKCTDPH 1922
Query: 1225 AKINVLLQAYISQLKLEGLSLTSDMVFITQSAGRLMRALFEIVLKRGWAQVAEKALNLCK 1046
K N LLQA+ ++ L G +L D + SA RL++A+ +++ GW +A A+ + +
Sbjct: 1923 VKANALLQAHFARQPLGG-NLALDQREVILSASRLLQAMVDVISSNGWLSLAVLAMEVSQ 1981
Query: 1045 MVGKQMWSVQMPLRQFHGIQKDLLTKLE 962
MV + MW L Q +L + +
Sbjct: 1982 MVTQGMWDRDSMLLQLPHFTXELAKRCQ 2009
Score = 96.3 bits (238), Expect = 9e-17
Identities = 66/203 (32%), Positives = 109/203 (53%), Gaps = 8/203 (3%)
Frame = -1
Query: 586 YPPPTELLDLQPLPVTALRNPAYEALYQEFKHFNPVQTQVFTVLYNTDDNVLVAAPTGSG 407
+ P +L+ + +P A PA++ + Q N VQ++V+ DN+L+ APTG+G
Sbjct: 485 FXPDEKLVXISAMPEWA--QPAFKGMTQ----LNRVQSRVYETALFKADNILLCAPTGAG 538
Query: 406 KT------ICAEFAVLRNHQKGSNNVM--RVVYIAPMEALAKESYRDWERKFGKGLGLRV 251
KT I +FA+ N + GS N ++VY+APM+AL E + + K + V
Sbjct: 539 KTNVAVLTILQQFALNMNKEDGSINHSDYKIVYVAPMKALVAEVVGNLSNRL-KDYXVXV 597
Query: 250 VELTGETSTDLKLLEKGQIVISTPEKWDSLSRRWKHRKHIQQVSLFVIDEXXXXXXXXXX 71
EL+G+ + + +E+ QI+++TPEKWD ++R+ R + Q V L +IDE
Sbjct: 598 RELSGDQTLTRQQIEETQIIVTTPEKWDIITRKSGDRTYTQLVKLLIIDEIHLLHDNRGP 657
Query: 70 XLEVIVSRMRYIASQSENKIRIV 2
LE IV+R +++ IR+V
Sbjct: 658 VLESIVARTVRQIETTKDHIRLV 680
>ref|XP_007010915.1| U5 small nuclear ribonucleoprotein helicase, putative isoform 2
[Theobroma cacao] gi|508727828|gb|EOY19725.1| U5 small
nuclear ribonucleoprotein helicase, putative isoform 2
[Theobroma cacao]
Length = 2062
Score = 1135 bits (2937), Expect = 0.0
Identities = 565/672 (84%), Positives = 609/672 (90%), Gaps = 25/672 (3%)
Frame = -1
Query: 1942 GVNLPAHTVIIKGTQIYNPEKGAWTELSPLDVMQMLGRAGRPQYDTYGEGIIITGHSELQ 1763
GVNLPAHTVIIKGTQIY+PEKGAWTELSPLDVMQMLGRAGRPQYD+YGEGIIITGHSELQ
Sbjct: 732 GVNLPAHTVIIKGTQIYSPEKGAWTELSPLDVMQMLGRAGRPQYDSYGEGIIITGHSELQ 791
Query: 1762 YYLSLMNAQLPIESQFVSKLADQLNAEIVLGTVQNAKEACNWLGYTYLYIRMLRNPTLYG 1583
YYLSLMN QLPIESQFVSKLADQLNAEIVLGTVQNA+EACNW+ YTYLY+RMLRNPTLYG
Sbjct: 792 YYLSLMNQQLPIESQFVSKLADQLNAEIVLGTVQNAREACNWITYTYLYVRMLRNPTLYG 851
Query: 1582 LAADVLSRDKLLEERRADLIHSAATVLEKNNLVKYDRKSGYFQVTDLGRIASYYYITHGT 1403
L ADVLSRD L+ERRADLIHSAAT+L+KNNLVKYDRKSGYFQVTDLGRIASYYYITHGT
Sbjct: 852 LPADVLSRDLTLDERRADLIHSAATILDKNNLVKYDRKSGYFQVTDLGRIASYYYITHGT 911
Query: 1402 ISTYNEHLKPTMGDIELCRLFSLSEEFKYVTVRQDEKMELAKLLDRVPIPVKESLEEPSA 1223
ISTYNEHLKPTMGDIEL RLFSLSEEFKYVTVRQDEKMELAKLLDRVPIP+KESLEEPSA
Sbjct: 912 ISTYNEHLKPTMGDIELYRLFSLSEEFKYVTVRQDEKMELAKLLDRVPIPIKESLEEPSA 971
Query: 1222 KINVLLQAYISQLKLEGLSLTSDMVFITQSAGRLMRALFEIVLKRGWAQVAEKALNLCKM 1043
KINVLLQAYISQLKLEGLSLTSDMV+ITQSAGRL+RALFEIVLKRGWAQ+AEKALNLCKM
Sbjct: 972 KINVLLQAYISQLKLEGLSLTSDMVYITQSAGRLLRALFEIVLKRGWAQLAEKALNLCKM 1031
Query: 1042 VGKQMWSVQMPLRQFHGIQKDLLTKLERKELAWDRYYDLTSTEIGELIRQQKVGKMLHKY 863
V K+MW+VQ PLRQFHGI ++L KLE+K+LAWDRYYDL+S EIGELIR QK+G+ LH++
Sbjct: 1032 VTKRMWNVQTPLRQFHGIPNEILMKLEKKDLAWDRYYDLSSQEIGELIRFQKMGRTLHRF 1091
Query: 862 IHQFPKLNLAAHVQPITRTVLRVELTITPDFMWEDRVHG--------------------- 746
IHQFPKLNLAAHVQPITRTVLRVELTITPDF WED+VHG
Sbjct: 1092 IHQFPKLNLAAHVQPITRTVLRVELTITPDFQWEDKVHGYVEPFWVIVEDNDGEYVLHHE 1151
Query: 745 ----XXXXXXEDHTLSFTVPIYEPLPPQYFIRVVSDKWLNSQSVLPVSFRHLILPEKYPP 578
EDHTL+FTVPIYEPLPPQYFIRVVSDKWL SQ++LPVSFRHLILPEKYPP
Sbjct: 1152 YFLLKKQYIDEDHTLNFTVPIYEPLPPQYFIRVVSDKWLGSQTILPVSFRHLILPEKYPP 1211
Query: 577 PTELLDLQPLPVTALRNPAYEALYQEFKHFNPVQTQVFTVLYNTDDNVLVAAPTGSGKTI 398
PTELLDLQPLPVTALRNP+YEALYQ+FKHFNPVQTQVFTVLYNTDDNVLVAAPTGSGKTI
Sbjct: 1212 PTELLDLQPLPVTALRNPSYEALYQDFKHFNPVQTQVFTVLYNTDDNVLVAAPTGSGKTI 1271
Query: 397 CAEFAVLRNHQKGSNNVMRVVYIAPMEALAKESYRDWERKFGKGLGLRVVELTGETSTDL 218
CAEFA+LRNHQKG +++MRVVYIAP+EA+AKE YRDWE+KFG+GLG+RVVELTGETS DL
Sbjct: 1272 CAEFAILRNHQKGPDSIMRVVYIAPLEAIAKERYRDWEKKFGRGLGMRVVELTGETSMDL 1331
Query: 217 KLLEKGQIVISTPEKWDSLSRRWKHRKHIQQVSLFVIDEXXXXXXXXXXXLEVIVSRMRY 38
KLLEKGQIVISTPEKWD+LSRRWK RK++QQVS+F++DE LEVIVSRMRY
Sbjct: 1332 KLLEKGQIVISTPEKWDALSRRWKQRKYVQQVSVFIVDELHLIGGQGGPVLEVIVSRMRY 1391
Query: 37 IASQSENKIRIV 2
IASQ ENKIRIV
Sbjct: 1392 IASQVENKIRIV 1403
Score = 155 bits (392), Expect = 1e-34
Identities = 104/380 (27%), Positives = 188/380 (49%), Gaps = 7/380 (1%)
Frame = -1
Query: 1942 GVNLPAHTVIIKGTQIYNPEKGAWTELSPLDVMQMLGRAGRPQYDTYGEGIIITGHSELQ 1763
GV L AH V++ GTQ Y+ + A T+ D++QM+G A RP D G+ +I+ +
Sbjct: 1569 GVPLSAHLVVVMGTQYYDGRENAHTDYPVTDLLQMMGHASRPLLDNSGKCVILCHAPRKE 1628
Query: 1762 YYLSLMNAQLPIESQFVSKLADQLNAEIVLGTVQNAKEACNWLGYTYLYIRMLRNPTLYG 1583
YY + P+ES L D NAEIV ++N ++A ++L +T++Y R+ +NP Y
Sbjct: 1629 YYKKFLYEAFPVESHLHHFLHDNFNAEIVALVIENKQDAVDYLTWTFMYRRLTQNPNYYN 1688
Query: 1582 LAADVLSRDKLLEERRADLIHSAATVLEKNNLVKYDRKSGYFQVTDLGRIASYYYITHGT 1403
L + L + ++L+ + T LE + + + +LG IASYYYI++ T
Sbjct: 1689 LQG---VSHRHLSDHLSELVENTLTDLEASKCITIEDDMD-LSPLNLGMIASYYYISYTT 1744
Query: 1402 ISTYNEHLKPTMGDIELCRLFSLSEEFKYVTVRQDEKMELAKLLDRVPIPVKE-SLEEPS 1226
I ++ L L + + + E+ + +R E+ L +L++ + +P
Sbjct: 1745 IERFSSSLTSKTKMKGLLEILASASEYAQLPIRPGEEDVLRRLINHQRFSFENPRCTDPH 1804
Query: 1225 AKINVLLQAYISQLKLEGLSLTSDMVFITQSAGRLMRALFEIVLKRGWAQVAEKALNLCK 1046
K N LLQA+ ++ + G +L D + A RL++A+ +++ GW +A A+ + +
Sbjct: 1805 VKANALLQAHFTRQHVGG-NLALDQREVLLYATRLLQAMVDVISSNGWLSLALLAMEVSQ 1863
Query: 1045 MVGKQMWSVQMPLRQFHGIQKDLLTKLERK-----ELAWDRYYDLTSTEIGELIRQQKVG 881
MV + MW L Q KDL + + E +D ++ E EL++ +
Sbjct: 1864 MVTQGMWERDSMLLQLPHFTKDLAKRCQENPGKNIETIFD-LVEMEDDERRELLQMSDLQ 1922
Query: 880 KM-LHKYIHQFPKLNLAAHV 824
+ + K+ ++FP ++L+ V
Sbjct: 1923 LLDIAKFCNRFPNIDLSYDV 1942
Score = 90.9 bits (224), Expect = 4e-15
Identities = 65/211 (30%), Positives = 110/211 (52%), Gaps = 9/211 (4%)
Frame = -1
Query: 607 HLILPEKYPPPTE--LLDLQPLPVTALRNPAYEALYQEFKHFNPVQTQVFTVLYNTDDNV 434
H+ P+ P ++ L+ + +P A PA++ + Q N VQ++V+ DN+
Sbjct: 360 HVPAPKSKPLESDERLVKISEMPEWA--QPAFKGMQQ----LNRVQSKVYETALFAADNI 413
Query: 433 LVAAPTGSGKTICAEFAVLRN-----HQKGSNNVM--RVVYIAPMEALAKESYRDWERKF 275
L+ APTG+GKT A +L+ GS N ++VY+APM+AL E + +
Sbjct: 414 LLCAPTGAGKTNVAVLTILQQLALNMDSDGSINHSNYKIVYVAPMKALVAEVVGNLSHRL 473
Query: 274 GKGLGLRVVELTGETSTDLKLLEKGQIVISTPEKWDSLSRRWKHRKHIQQVSLFVIDEXX 95
+ G+ V EL+G+ + + +++ QI+++TPEKWD ++R+ R + Q V L +IDE
Sbjct: 474 -EAYGVTVRELSGDQTLTRQQIDETQIIVTTPEKWDIITRKSGDRTYTQLVKLLIIDEIH 532
Query: 94 XXXXXXXXXLEVIVSRMRYIASQSENKIRIV 2
LE IV+R ++ IR+V
Sbjct: 533 LLHDNRGPVLESIVARTVRQIETTKEHIRLV 563
>ref|XP_007010914.1| U5 small nuclear ribonucleoprotein helicase, putative isoform 1
[Theobroma cacao] gi|508727827|gb|EOY19724.1| U5 small
nuclear ribonucleoprotein helicase, putative isoform 1
[Theobroma cacao]
Length = 2176
Score = 1135 bits (2937), Expect = 0.0
Identities = 565/672 (84%), Positives = 609/672 (90%), Gaps = 25/672 (3%)
Frame = -1
Query: 1942 GVNLPAHTVIIKGTQIYNPEKGAWTELSPLDVMQMLGRAGRPQYDTYGEGIIITGHSELQ 1763
GVNLPAHTVIIKGTQIY+PEKGAWTELSPLDVMQMLGRAGRPQYD+YGEGIIITGHSELQ
Sbjct: 846 GVNLPAHTVIIKGTQIYSPEKGAWTELSPLDVMQMLGRAGRPQYDSYGEGIIITGHSELQ 905
Query: 1762 YYLSLMNAQLPIESQFVSKLADQLNAEIVLGTVQNAKEACNWLGYTYLYIRMLRNPTLYG 1583
YYLSLMN QLPIESQFVSKLADQLNAEIVLGTVQNA+EACNW+ YTYLY+RMLRNPTLYG
Sbjct: 906 YYLSLMNQQLPIESQFVSKLADQLNAEIVLGTVQNAREACNWITYTYLYVRMLRNPTLYG 965
Query: 1582 LAADVLSRDKLLEERRADLIHSAATVLEKNNLVKYDRKSGYFQVTDLGRIASYYYITHGT 1403
L ADVLSRD L+ERRADLIHSAAT+L+KNNLVKYDRKSGYFQVTDLGRIASYYYITHGT
Sbjct: 966 LPADVLSRDLTLDERRADLIHSAATILDKNNLVKYDRKSGYFQVTDLGRIASYYYITHGT 1025
Query: 1402 ISTYNEHLKPTMGDIELCRLFSLSEEFKYVTVRQDEKMELAKLLDRVPIPVKESLEEPSA 1223
ISTYNEHLKPTMGDIEL RLFSLSEEFKYVTVRQDEKMELAKLLDRVPIP+KESLEEPSA
Sbjct: 1026 ISTYNEHLKPTMGDIELYRLFSLSEEFKYVTVRQDEKMELAKLLDRVPIPIKESLEEPSA 1085
Query: 1222 KINVLLQAYISQLKLEGLSLTSDMVFITQSAGRLMRALFEIVLKRGWAQVAEKALNLCKM 1043
KINVLLQAYISQLKLEGLSLTSDMV+ITQSAGRL+RALFEIVLKRGWAQ+AEKALNLCKM
Sbjct: 1086 KINVLLQAYISQLKLEGLSLTSDMVYITQSAGRLLRALFEIVLKRGWAQLAEKALNLCKM 1145
Query: 1042 VGKQMWSVQMPLRQFHGIQKDLLTKLERKELAWDRYYDLTSTEIGELIRQQKVGKMLHKY 863
V K+MW+VQ PLRQFHGI ++L KLE+K+LAWDRYYDL+S EIGELIR QK+G+ LH++
Sbjct: 1146 VTKRMWNVQTPLRQFHGIPNEILMKLEKKDLAWDRYYDLSSQEIGELIRFQKMGRTLHRF 1205
Query: 862 IHQFPKLNLAAHVQPITRTVLRVELTITPDFMWEDRVHG--------------------- 746
IHQFPKLNLAAHVQPITRTVLRVELTITPDF WED+VHG
Sbjct: 1206 IHQFPKLNLAAHVQPITRTVLRVELTITPDFQWEDKVHGYVEPFWVIVEDNDGEYVLHHE 1265
Query: 745 ----XXXXXXEDHTLSFTVPIYEPLPPQYFIRVVSDKWLNSQSVLPVSFRHLILPEKYPP 578
EDHTL+FTVPIYEPLPPQYFIRVVSDKWL SQ++LPVSFRHLILPEKYPP
Sbjct: 1266 YFLLKKQYIDEDHTLNFTVPIYEPLPPQYFIRVVSDKWLGSQTILPVSFRHLILPEKYPP 1325
Query: 577 PTELLDLQPLPVTALRNPAYEALYQEFKHFNPVQTQVFTVLYNTDDNVLVAAPTGSGKTI 398
PTELLDLQPLPVTALRNP+YEALYQ+FKHFNPVQTQVFTVLYNTDDNVLVAAPTGSGKTI
Sbjct: 1326 PTELLDLQPLPVTALRNPSYEALYQDFKHFNPVQTQVFTVLYNTDDNVLVAAPTGSGKTI 1385
Query: 397 CAEFAVLRNHQKGSNNVMRVVYIAPMEALAKESYRDWERKFGKGLGLRVVELTGETSTDL 218
CAEFA+LRNHQKG +++MRVVYIAP+EA+AKE YRDWE+KFG+GLG+RVVELTGETS DL
Sbjct: 1386 CAEFAILRNHQKGPDSIMRVVYIAPLEAIAKERYRDWEKKFGRGLGMRVVELTGETSMDL 1445
Query: 217 KLLEKGQIVISTPEKWDSLSRRWKHRKHIQQVSLFVIDEXXXXXXXXXXXLEVIVSRMRY 38
KLLEKGQIVISTPEKWD+LSRRWK RK++QQVS+F++DE LEVIVSRMRY
Sbjct: 1446 KLLEKGQIVISTPEKWDALSRRWKQRKYVQQVSVFIVDELHLIGGQGGPVLEVIVSRMRY 1505
Query: 37 IASQSENKIRIV 2
IASQ ENKIRIV
Sbjct: 1506 IASQVENKIRIV 1517
Score = 155 bits (392), Expect = 1e-34
Identities = 104/380 (27%), Positives = 188/380 (49%), Gaps = 7/380 (1%)
Frame = -1
Query: 1942 GVNLPAHTVIIKGTQIYNPEKGAWTELSPLDVMQMLGRAGRPQYDTYGEGIIITGHSELQ 1763
GV L AH V++ GTQ Y+ + A T+ D++QM+G A RP D G+ +I+ +
Sbjct: 1683 GVPLSAHLVVVMGTQYYDGRENAHTDYPVTDLLQMMGHASRPLLDNSGKCVILCHAPRKE 1742
Query: 1762 YYLSLMNAQLPIESQFVSKLADQLNAEIVLGTVQNAKEACNWLGYTYLYIRMLRNPTLYG 1583
YY + P+ES L D NAEIV ++N ++A ++L +T++Y R+ +NP Y
Sbjct: 1743 YYKKFLYEAFPVESHLHHFLHDNFNAEIVALVIENKQDAVDYLTWTFMYRRLTQNPNYYN 1802
Query: 1582 LAADVLSRDKLLEERRADLIHSAATVLEKNNLVKYDRKSGYFQVTDLGRIASYYYITHGT 1403
L + L + ++L+ + T LE + + + +LG IASYYYI++ T
Sbjct: 1803 LQG---VSHRHLSDHLSELVENTLTDLEASKCITIEDDMD-LSPLNLGMIASYYYISYTT 1858
Query: 1402 ISTYNEHLKPTMGDIELCRLFSLSEEFKYVTVRQDEKMELAKLLDRVPIPVKE-SLEEPS 1226
I ++ L L + + + E+ + +R E+ L +L++ + +P
Sbjct: 1859 IERFSSSLTSKTKMKGLLEILASASEYAQLPIRPGEEDVLRRLINHQRFSFENPRCTDPH 1918
Query: 1225 AKINVLLQAYISQLKLEGLSLTSDMVFITQSAGRLMRALFEIVLKRGWAQVAEKALNLCK 1046
K N LLQA+ ++ + G +L D + A RL++A+ +++ GW +A A+ + +
Sbjct: 1919 VKANALLQAHFTRQHVGG-NLALDQREVLLYATRLLQAMVDVISSNGWLSLALLAMEVSQ 1977
Query: 1045 MVGKQMWSVQMPLRQFHGIQKDLLTKLERK-----ELAWDRYYDLTSTEIGELIRQQKVG 881
MV + MW L Q KDL + + E +D ++ E EL++ +
Sbjct: 1978 MVTQGMWERDSMLLQLPHFTKDLAKRCQENPGKNIETIFD-LVEMEDDERRELLQMSDLQ 2036
Query: 880 KM-LHKYIHQFPKLNLAAHV 824
+ + K+ ++FP ++L+ V
Sbjct: 2037 LLDIAKFCNRFPNIDLSYDV 2056
Score = 90.9 bits (224), Expect = 4e-15
Identities = 65/211 (30%), Positives = 110/211 (52%), Gaps = 9/211 (4%)
Frame = -1
Query: 607 HLILPEKYPPPTE--LLDLQPLPVTALRNPAYEALYQEFKHFNPVQTQVFTVLYNTDDNV 434
H+ P+ P ++ L+ + +P A PA++ + Q N VQ++V+ DN+
Sbjct: 474 HVPAPKSKPLESDERLVKISEMPEWA--QPAFKGMQQ----LNRVQSKVYETALFAADNI 527
Query: 433 LVAAPTGSGKTICAEFAVLRN-----HQKGSNNVM--RVVYIAPMEALAKESYRDWERKF 275
L+ APTG+GKT A +L+ GS N ++VY+APM+AL E + +
Sbjct: 528 LLCAPTGAGKTNVAVLTILQQLALNMDSDGSINHSNYKIVYVAPMKALVAEVVGNLSHRL 587
Query: 274 GKGLGLRVVELTGETSTDLKLLEKGQIVISTPEKWDSLSRRWKHRKHIQQVSLFVIDEXX 95
+ G+ V EL+G+ + + +++ QI+++TPEKWD ++R+ R + Q V L +IDE
Sbjct: 588 -EAYGVTVRELSGDQTLTRQQIDETQIIVTTPEKWDIITRKSGDRTYTQLVKLLIIDEIH 646
Query: 94 XXXXXXXXXLEVIVSRMRYIASQSENKIRIV 2
LE IV+R ++ IR+V
Sbjct: 647 LLHDNRGPVLESIVARTVRQIETTKEHIRLV 677
>ref|XP_012073544.1| PREDICTED: U5 small nuclear ribonucleoprotein 200 kDa helicase
[Jatropha curcas] gi|643728789|gb|KDP36726.1|
hypothetical protein JCGZ_08017 [Jatropha curcas]
Length = 2179
Score = 1134 bits (2934), Expect = 0.0
Identities = 566/672 (84%), Positives = 608/672 (90%), Gaps = 25/672 (3%)
Frame = -1
Query: 1942 GVNLPAHTVIIKGTQIYNPEKGAWTELSPLDVMQMLGRAGRPQYDTYGEGIIITGHSELQ 1763
GVNLPAH+VIIKGTQIYNPEKGAWTELSPLDVMQMLGRAGRPQ+D+YGEGIIITGHSELQ
Sbjct: 848 GVNLPAHSVIIKGTQIYNPEKGAWTELSPLDVMQMLGRAGRPQFDSYGEGIIITGHSELQ 907
Query: 1762 YYLSLMNAQLPIESQFVSKLADQLNAEIVLGTVQNAKEACNWLGYTYLYIRMLRNPTLYG 1583
YYLSLMN QLPIESQFVSKLADQLNAEIVLGTVQNA+EACNWLGYTYLY+RMLRNPTLYG
Sbjct: 908 YYLSLMNQQLPIESQFVSKLADQLNAEIVLGTVQNAREACNWLGYTYLYVRMLRNPTLYG 967
Query: 1582 LAADVLSRDKLLEERRADLIHSAATVLEKNNLVKYDRKSGYFQVTDLGRIASYYYITHGT 1403
LA DVL+RD LEERRADLIHSAAT+LEKNNLVKYDRKSGYFQVTDLGRIASYYYITHGT
Sbjct: 968 LAPDVLTRDITLEERRADLIHSAATILEKNNLVKYDRKSGYFQVTDLGRIASYYYITHGT 1027
Query: 1402 ISTYNEHLKPTMGDIELCRLFSLSEEFKYVTVRQDEKMELAKLLDRVPIPVKESLEEPSA 1223
ISTYNEHLKPTMGDIELCRLFSLSEEFKYVTVRQDEKMELAKLLDRVPIP+KESLEEPSA
Sbjct: 1028 ISTYNEHLKPTMGDIELCRLFSLSEEFKYVTVRQDEKMELAKLLDRVPIPIKESLEEPSA 1087
Query: 1222 KINVLLQAYISQLKLEGLSLTSDMVFITQSAGRLMRALFEIVLKRGWAQVAEKALNLCKM 1043
KINVLLQAYISQLKLEGLSLTSDMVFITQSAGRLMRALFEIVLKRGWAQ+AEKALNLCKM
Sbjct: 1088 KINVLLQAYISQLKLEGLSLTSDMVFITQSAGRLMRALFEIVLKRGWAQLAEKALNLCKM 1147
Query: 1042 VGKQMWSVQMPLRQFHGIQKDLLTKLERKELAWDRYYDLTSTEIGELIRQQKVGKMLHKY 863
V K+MWSVQ PLRQF+GI ++L KLE+K+LAW+R+YDL+S EIGELIR K+G+ LHK+
Sbjct: 1148 VNKRMWSVQTPLRQFNGIPNEILMKLEKKDLAWERFYDLSSQEIGELIRFPKMGRTLHKF 1207
Query: 862 IHQFPKLNLAAHVQPITRTVLRVELTITPDFMWEDRVHG--------------------- 746
IHQFPKLNLAAHVQPITRTVLR+ELTITPDF WED+VHG
Sbjct: 1208 IHQFPKLNLAAHVQPITRTVLRIELTITPDFQWEDKVHGYVEPFWVIVEDNDGEYILHHE 1267
Query: 745 ----XXXXXXEDHTLSFTVPIYEPLPPQYFIRVVSDKWLNSQSVLPVSFRHLILPEKYPP 578
EDHTL+FTVPIYEPL PQYFIRVVSDKWL SQ+VLPVSFRHLILPEKYPP
Sbjct: 1268 YFMLKKQYIDEDHTLNFTVPIYEPLSPQYFIRVVSDKWLGSQTVLPVSFRHLILPEKYPP 1327
Query: 577 PTELLDLQPLPVTALRNPAYEALYQEFKHFNPVQTQVFTVLYNTDDNVLVAAPTGSGKTI 398
PTELLDLQPLPVTALRNP+YEALYQ+FKHFNPVQTQVFTVLYNTDDN+LVAAPTGSGKTI
Sbjct: 1328 PTELLDLQPLPVTALRNPSYEALYQDFKHFNPVQTQVFTVLYNTDDNILVAAPTGSGKTI 1387
Query: 397 CAEFAVLRNHQKGSNNVMRVVYIAPMEALAKESYRDWERKFGKGLGLRVVELTGETSTDL 218
CAEFA+LRN QKG +++MR VYIAP+EA+AKE YRDWERKFG+GLG+RVVELTGET+TDL
Sbjct: 1388 CAEFAILRNLQKGPDSIMRAVYIAPLEAIAKERYRDWERKFGQGLGIRVVELTGETATDL 1447
Query: 217 KLLEKGQIVISTPEKWDSLSRRWKHRKHIQQVSLFVIDEXXXXXXXXXXXLEVIVSRMRY 38
KLLEKGQI+ISTPEKWD+LSRRWK RK++QQVSLF+IDE LEVIVSRMRY
Sbjct: 1448 KLLEKGQIIISTPEKWDALSRRWKQRKYVQQVSLFIIDELHLIGGQGGPVLEVIVSRMRY 1507
Query: 37 IASQSENKIRIV 2
IASQ ENKIRIV
Sbjct: 1508 IASQIENKIRIV 1519
Score = 166 bits (420), Expect = 7e-38
Identities = 110/379 (29%), Positives = 190/379 (50%), Gaps = 6/379 (1%)
Frame = -1
Query: 1942 GVNLPAHTVIIKGTQIYNPEKGAWTELSPLDVMQMLGRAGRPQYDTYGEGIIITGHSELQ 1763
GV L AH VI+ GTQ Y+ + A T+ D++QM+G A RP D G+ +I+ +
Sbjct: 1686 GVPLSAHLVIVMGTQYYDGRENAHTDYPVTDLLQMMGHASRPLLDNSGKCVILCHAPRKE 1745
Query: 1762 YYLSLMNAQLPIESQFVSKLADQLNAEIVLGTVQNAKEACNWLGYTYLYIRMLRNPTLYG 1583
YY + P+ES L D NAE+V G ++N ++A ++L +T++Y R+ +NP Y
Sbjct: 1746 YYKKFLYEAFPVESHLHHFLHDNFNAEVVAGVIENKQDAVDYLTWTFMYRRLTQNPNYYN 1805
Query: 1582 LAADVLSRDKLLEERRADLIHSAATVLEKNNLVKYDRKSGYFQVTDLGRIASYYYITHGT 1403
L + L + ++L+ + LE + V + +LG IASYYYI++ T
Sbjct: 1806 LQG---VSHRHLSDHLSELVENTLKDLEASKCVAIEEDMD-LSPLNLGMIASYYYISYTT 1861
Query: 1402 ISTYNEHLKPTMGDIELCRLFSLSEEFKYVTVRQDEKMELAKLLDRVPIPVKE-SLEEPS 1226
I ++ L P L + + + E+ + VR E+ L +L++ + +P
Sbjct: 1862 IERFSSSLTPKTKMKGLLEILASASEYAQLPVRPGEEEVLRRLINHQRFSFENPRYTDPH 1921
Query: 1225 AKINVLLQAYISQLKLEGLSLTSDMVFITQSAGRLMRALFEIVLKRGWAQVAEKALNLCK 1046
K NVLLQA+ S+ + G +L D + SA RL++A+ +++ GW +A A+ + +
Sbjct: 1922 VKANVLLQAHFSRQYVGG-NLALDQREVLLSAARLLQAIVDVISSNGWLSLALLAMEVSQ 1980
Query: 1045 MVGKQMWSVQMPLRQFHGIQKDLLTKL-ERKELAWDRYYDLTSTEIGEL--IRQQKVGKM 875
MV + MW L Q K+L K E + + +DL E E + Q ++
Sbjct: 1981 MVTQGMWERDSMLLQLPHFTKELAKKCQENPGKSIETVFDLVEMEDDERRELLQMSDSQL 2040
Query: 874 LH--KYIHQFPKLNLAAHV 824
L ++ ++FP ++++ V
Sbjct: 2041 LDIVRFCNRFPNIDMSYEV 2059
Score = 94.7 bits (234), Expect = 3e-16
Identities = 65/205 (31%), Positives = 107/205 (52%), Gaps = 7/205 (3%)
Frame = -1
Query: 595 PEKYPPPTELLDLQPLPVTALRNPAYEALYQEFKHFNPVQTQVFTVLYNTDDNVLVAAPT 416
P P L+ + +P A PA++ + Q N VQ++V+ DN+L+ APT
Sbjct: 482 PRPLEPDERLVKISDMPDWA--QPAFKGMQQ----LNRVQSKVYETALFKADNILLCAPT 535
Query: 415 GSGKT------ICAEFAVLRNHQKGSNNV-MRVVYIAPMEALAKESYRDWERKFGKGLGL 257
G+GKT I + A+ RN N+ ++VY+APM+AL E + + + G+
Sbjct: 536 GAGKTNVAVLTILQQIALNRNPDGSFNHSNYKIVYVAPMKALVAEVVGNLSNRLQE-YGV 594
Query: 256 RVVELTGETSTDLKLLEKGQIVISTPEKWDSLSRRWKHRKHIQQVSLFVIDEXXXXXXXX 77
+V EL+G+ + + +E+ QI+++TPEKWD ++R+ R + Q V L +IDE
Sbjct: 595 KVKELSGDQTLTRQQIEETQIIVTTPEKWDIITRKSGDRTYTQLVKLLIIDEIHLLHDNR 654
Query: 76 XXXLEVIVSRMRYIASQSENKIRIV 2
LE IV+R ++ IR+V
Sbjct: 655 GPVLESIVARTVRQIETTKEHIRLV 679
>gb|KHG18677.1| U5 small nuclear ribonucleoprotein helicase [Gossypium arboreum]
Length = 2177
Score = 1133 bits (2930), Expect = 0.0
Identities = 562/672 (83%), Positives = 606/672 (90%), Gaps = 25/672 (3%)
Frame = -1
Query: 1942 GVNLPAHTVIIKGTQIYNPEKGAWTELSPLDVMQMLGRAGRPQYDTYGEGIIITGHSELQ 1763
GVNLPAHTVIIKGTQIY+PEKGAWTELSPLDVMQMLGRAGRPQYD+YGEGIIITGHSELQ
Sbjct: 846 GVNLPAHTVIIKGTQIYSPEKGAWTELSPLDVMQMLGRAGRPQYDSYGEGIIITGHSELQ 905
Query: 1762 YYLSLMNAQLPIESQFVSKLADQLNAEIVLGTVQNAKEACNWLGYTYLYIRMLRNPTLYG 1583
YYLSLMN QLPIESQF+SKLADQLNAEIVLGTVQNA+EACNW+GYTYLYIRMLRNPTLYG
Sbjct: 906 YYLSLMNQQLPIESQFISKLADQLNAEIVLGTVQNAREACNWIGYTYLYIRMLRNPTLYG 965
Query: 1582 LAADVLSRDKLLEERRADLIHSAATVLEKNNLVKYDRKSGYFQVTDLGRIASYYYITHGT 1403
L ADVLSRD LEERRADLIHSAAT+L+KNNLVKYDRKSGYFQVTDLGRIASYYYITHGT
Sbjct: 966 LPADVLSRDLTLEERRADLIHSAATILDKNNLVKYDRKSGYFQVTDLGRIASYYYITHGT 1025
Query: 1402 ISTYNEHLKPTMGDIELCRLFSLSEEFKYVTVRQDEKMELAKLLDRVPIPVKESLEEPSA 1223
ISTYNEHLKPTMGDIELCRLFSLSEEF+YVTVRQDEKMELAKLLDRVPIP+KESLEEPSA
Sbjct: 1026 ISTYNEHLKPTMGDIELCRLFSLSEEFRYVTVRQDEKMELAKLLDRVPIPIKESLEEPSA 1085
Query: 1222 KINVLLQAYISQLKLEGLSLTSDMVFITQSAGRLMRALFEIVLKRGWAQVAEKALNLCKM 1043
KINVLLQAYISQLKLEGLSLTSDMV+ITQSAGRL+RALFEIVLKRGWAQ+AEKALNLCKM
Sbjct: 1086 KINVLLQAYISQLKLEGLSLTSDMVYITQSAGRLLRALFEIVLKRGWAQLAEKALNLCKM 1145
Query: 1042 VGKQMWSVQMPLRQFHGIQKDLLTKLERKELAWDRYYDLTSTEIGELIRQQKVGKMLHKY 863
V K+MW+VQ PLRQF+GI ++L KLE+K+LAWDRYYDL+S EIGELIR K+G+ LH++
Sbjct: 1146 VTKRMWNVQTPLRQFNGIPNEILMKLEKKDLAWDRYYDLSSQEIGELIRYPKMGRTLHRF 1205
Query: 862 IHQFPKLNLAAHVQPITRTVLRVELTITPDFMWEDRVHG--------------------- 746
IHQFPKLNLAAHVQPITRT+LRVELTITPDF WED+VHG
Sbjct: 1206 IHQFPKLNLAAHVQPITRTILRVELTITPDFQWEDKVHGYVEPFWVIIEDNDGEYILHHE 1265
Query: 745 ----XXXXXXEDHTLSFTVPIYEPLPPQYFIRVVSDKWLNSQSVLPVSFRHLILPEKYPP 578
EDHTL+FTVPIYEPLPPQYFIRVVSDKWL SQ+VLP+SFRHLILPEKYPP
Sbjct: 1266 YFLLKKQYIDEDHTLNFTVPIYEPLPPQYFIRVVSDKWLGSQTVLPISFRHLILPEKYPP 1325
Query: 577 PTELLDLQPLPVTALRNPAYEALYQEFKHFNPVQTQVFTVLYNTDDNVLVAAPTGSGKTI 398
PTELLDLQPLPVTALRNP+YEALYQ+FKHFNPVQTQVFTVLYNTDDNVLVAAPTGSGKTI
Sbjct: 1326 PTELLDLQPLPVTALRNPSYEALYQDFKHFNPVQTQVFTVLYNTDDNVLVAAPTGSGKTI 1385
Query: 397 CAEFAVLRNHQKGSNNVMRVVYIAPMEALAKESYRDWERKFGKGLGLRVVELTGETSTDL 218
CAEFA+LRNHQKG ++ MRVVYIAP+EA+AKE YRDWERKFGKGLG+RVVELTGE + DL
Sbjct: 1386 CAEFAILRNHQKGPDSTMRVVYIAPLEAIAKERYRDWERKFGKGLGMRVVELTGELAMDL 1445
Query: 217 KLLEKGQIVISTPEKWDSLSRRWKHRKHIQQVSLFVIDEXXXXXXXXXXXLEVIVSRMRY 38
KLLEKGQ++ISTPEKWD+LSRRWK RK +QQVSLF++DE LEVIVSRMRY
Sbjct: 1446 KLLEKGQVIISTPEKWDALSRRWKQRKFVQQVSLFIVDELHLIGGQGGPVLEVIVSRMRY 1505
Query: 37 IASQSENKIRIV 2
IASQ E KIRIV
Sbjct: 1506 IASQVEKKIRIV 1517
Score = 153 bits (387), Expect = 5e-34
Identities = 103/380 (27%), Positives = 187/380 (49%), Gaps = 7/380 (1%)
Frame = -1
Query: 1942 GVNLPAHTVIIKGTQIYNPEKGAWTELSPLDVMQMLGRAGRPQYDTYGEGIIITGHSELQ 1763
GV L AH V++ GTQ Y+ + A T+ D++QM+G A RP D G+ +I+ +
Sbjct: 1684 GVPLSAHLVVVMGTQYYDGRENAHTDYPVTDLLQMMGHASRPLLDNSGKCVILCHAPRKE 1743
Query: 1762 YYLSLMNAQLPIESQFVSKLADQLNAEIVLGTVQNAKEACNWLGYTYLYIRMLRNPTLYG 1583
YY + P+ES L D NAEIV ++N ++A ++L +T++Y R+ +NP Y
Sbjct: 1744 YYKKFLYEAFPVESHLHHFLHDNFNAEIVATVIENKQDAVDYLTWTFMYRRLTQNPNYYN 1803
Query: 1582 LAADVLSRDKLLEERRADLIHSAATVLEKNNLVKYDRKSGYFQVTDLGRIASYYYITHGT 1403
L + L + ++L+ + LE + + + +LG IASYYYI++ T
Sbjct: 1804 LQG---VSHRHLSDHLSELVENTLNDLEASKCITIEDDMD-LSPLNLGMIASYYYISYTT 1859
Query: 1402 ISTYNEHLKPTMGDIELCRLFSLSEEFKYVTVRQDEKMELAKLLDRVPIPV-KESLEEPS 1226
I ++ L L + + + E+ + +R E+ L +L++ +P
Sbjct: 1860 IERFSSSLTSKTKMKGLLEILASASEYANLPIRPGEEEVLRRLINHQRFSFDNPRCTDPH 1919
Query: 1225 AKINVLLQAYISQLKLEGLSLTSDMVFITQSAGRLMRALFEIVLKRGWAQVAEKALNLCK 1046
K N LLQA+ S+ + G +L+ D + A RL++A+ +++ GW +A A+ + +
Sbjct: 1920 VKANALLQAHFSRQHVGG-NLSLDQREVLLFATRLLQAMVDVISSNGWLSLALLAMEVSQ 1978
Query: 1045 MVGKQMWSVQMPLRQFHGIQKDLLTKLERK-----ELAWDRYYDLTSTEIGELIRQQKVG 881
MV + MW L Q K+L + + E +D ++ E EL++ +
Sbjct: 1979 MVTQGMWERDSMLLQLPYFTKELAKRCQENPGKNIETIFD-LVEMEDDERRELLQMSDLQ 2037
Query: 880 KM-LHKYIHQFPKLNLAAHV 824
+ + K+ ++FP ++L+ V
Sbjct: 2038 LLDIAKFCNRFPNIDLSYEV 2057
Score = 90.1 bits (222), Expect = 6e-15
Identities = 72/232 (31%), Positives = 118/232 (50%), Gaps = 19/232 (8%)
Frame = -1
Query: 640 NSQSVLPV-SFRH-------LILPEKYPPPTE----LLDLQPLPVTALRNPAYEALYQEF 497
N + LPV S+RH + +P P E L+ + +P A PA++ + Q
Sbjct: 453 NKKCDLPVGSYRHHSKGYEEVHVPALKAKPLESNERLVKISEMPDWA--QPAFKGMQQ-- 508
Query: 496 KHFNPVQTQVFTVLYNTDDNVLVAAPTGSGKTICAEFAVLRN-----HQKGSNNV--MRV 338
N VQ++V+ + DN+L+ APTG+GKT A +L+ GS N ++
Sbjct: 509 --LNRVQSKVYETALFSADNILLCAPTGAGKTNVAVLTILQQLALNMDADGSINHGNYKI 566
Query: 337 VYIAPMEALAKESYRDWERKFGKGLGLRVVELTGETSTDLKLLEKGQIVISTPEKWDSLS 158
VY+APM+AL E + + + G+ V EL+G+ + + +++ QI+++TPEKWD ++
Sbjct: 567 VYVAPMKALVAEVVGNLSHRL-EAYGVTVRELSGDQTLTRQQIDETQIIVTTPEKWDIIT 625
Query: 157 RRWKHRKHIQQVSLFVIDEXXXXXXXXXXXLEVIVSRMRYIASQSENKIRIV 2
R+ R + Q V L +IDE LE IV+R ++ IR+V
Sbjct: 626 RKSGDRTYTQLVKLLIIDEIHLLHDNRGPVLESIVARTVRQIETTKEHIRLV 677
>ref|XP_009346826.1| PREDICTED: U5 small nuclear ribonucleoprotein 200 kDa helicase-like
[Pyrus x bretschneideri]
Length = 2179
Score = 1132 bits (2929), Expect = 0.0
Identities = 564/672 (83%), Positives = 607/672 (90%), Gaps = 25/672 (3%)
Frame = -1
Query: 1942 GVNLPAHTVIIKGTQIYNPEKGAWTELSPLDVMQMLGRAGRPQYDTYGEGIIITGHSELQ 1763
GVNLPAHTVIIKGTQIY+PEKGAWTELSPLDVMQMLGRAGRPQ+D+YGEGIIITGH+ELQ
Sbjct: 848 GVNLPAHTVIIKGTQIYDPEKGAWTELSPLDVMQMLGRAGRPQFDSYGEGIIITGHNELQ 907
Query: 1762 YYLSLMNAQLPIESQFVSKLADQLNAEIVLGTVQNAKEACNWLGYTYLYIRMLRNPTLYG 1583
YYLSLMN QLPIESQF+SKLADQLNAEIVLGTVQNA+EACNW+GYTYLY+RMLRNPTLYG
Sbjct: 908 YYLSLMNQQLPIESQFISKLADQLNAEIVLGTVQNAREACNWIGYTYLYVRMLRNPTLYG 967
Query: 1582 LAADVLSRDKLLEERRADLIHSAATVLEKNNLVKYDRKSGYFQVTDLGRIASYYYITHGT 1403
L ADVLSRD LEERRADLIHSAAT+L+K+NL+KYDRKSGYFQVTDLGRIASYYYITHGT
Sbjct: 968 LEADVLSRDITLEERRADLIHSAATILDKSNLIKYDRKSGYFQVTDLGRIASYYYITHGT 1027
Query: 1402 ISTYNEHLKPTMGDIELCRLFSLSEEFKYVTVRQDEKMELAKLLDRVPIPVKESLEEPSA 1223
ISTYNEHLKPTMGDIELCRLFSLSEEFKYVTVRQDEKMELAKLLDRVPIPVKESLEEPSA
Sbjct: 1028 ISTYNEHLKPTMGDIELCRLFSLSEEFKYVTVRQDEKMELAKLLDRVPIPVKESLEEPSA 1087
Query: 1222 KINVLLQAYISQLKLEGLSLTSDMVFITQSAGRLMRALFEIVLKRGWAQVAEKALNLCKM 1043
KINVLLQAYISQLKLEGLSLTSDMV+ITQSAGRL+RALFEIVLKRGWAQ+AEKA+N+CKM
Sbjct: 1088 KINVLLQAYISQLKLEGLSLTSDMVYITQSAGRLLRALFEIVLKRGWAQLAEKAMNMCKM 1147
Query: 1042 VGKQMWSVQMPLRQFHGIQKDLLTKLERKELAWDRYYDLTSTEIGELIRQQKVGKMLHKY 863
V K+MWSVQ PLRQF GI D+L KLE+K+LAWDRYYDL+S E+GELIR K+G+ LHK+
Sbjct: 1148 VNKKMWSVQTPLRQFTGIANDILMKLEKKDLAWDRYYDLSSQELGELIRMPKMGRTLHKF 1207
Query: 862 IHQFPKLNLAAHVQPITRTVLRVELTITPDFMWEDRVHG--------------------- 746
IHQFPKLNLAAHVQPITRTVLRVELTITPDF WED+VHG
Sbjct: 1208 IHQFPKLNLAAHVQPITRTVLRVELTITPDFQWEDKVHGYVEPFWVIVEDNDGEFVLHHE 1267
Query: 745 ----XXXXXXEDHTLSFTVPIYEPLPPQYFIRVVSDKWLNSQSVLPVSFRHLILPEKYPP 578
EDHTL+FTVPIYEPLPPQYFIRVVSD+WL SQ+VLPVSFRHLILPEKYPP
Sbjct: 1268 YFLLKKQYIDEDHTLNFTVPIYEPLPPQYFIRVVSDRWLGSQTVLPVSFRHLILPEKYPP 1327
Query: 577 PTELLDLQPLPVTALRNPAYEALYQEFKHFNPVQTQVFTVLYNTDDNVLVAAPTGSGKTI 398
PTELLDLQPLPVTALRNP YEALYQ+FKHFNPVQTQVFTVLYN+DDNVLVAAPTGSGKTI
Sbjct: 1328 PTELLDLQPLPVTALRNPLYEALYQDFKHFNPVQTQVFTVLYNSDDNVLVAAPTGSGKTI 1387
Query: 397 CAEFAVLRNHQKGSNNVMRVVYIAPMEALAKESYRDWERKFGKGLGLRVVELTGETSTDL 218
CAEFAVLR+HQK S+NVMRVVYIAP+EALAKE YRDWE+KFGKGL LRV LTGET+TDL
Sbjct: 1388 CAEFAVLRSHQKRSDNVMRVVYIAPIEALAKERYRDWEKKFGKGLNLRVELLTGETTTDL 1447
Query: 217 KLLEKGQIVISTPEKWDSLSRRWKHRKHIQQVSLFVIDEXXXXXXXXXXXLEVIVSRMRY 38
KLLE+GQI+ISTPEKWD+LSRRWK RKH+QQVSLF++DE LEVIVSRMRY
Sbjct: 1448 KLLERGQIIISTPEKWDALSRRWKQRKHVQQVSLFIVDELHLIGGQGGPILEVIVSRMRY 1507
Query: 37 IASQSENKIRIV 2
IASQSENKIRIV
Sbjct: 1508 IASQSENKIRIV 1519
Score = 158 bits (400), Expect = 1e-35
Identities = 104/380 (27%), Positives = 187/380 (49%), Gaps = 7/380 (1%)
Frame = -1
Query: 1942 GVNLPAHTVIIKGTQIYNPEKGAWTELSPLDVMQMLGRAGRPQYDTYGEGIIITGHSELQ 1763
GV L AH V++ GTQ Y+ + T+ D++QM+G A RP D G+ +I+ +
Sbjct: 1686 GVPLSAHLVVVMGTQYYDGRENVHTDYPVTDLLQMMGHASRPLLDNSGKCVILCHAPRKE 1745
Query: 1762 YYLSLMNAQLPIESQFVSKLADQLNAEIVLGTVQNAKEACNWLGYTYLYIRMLRNPTLYG 1583
YY + P+ES L D LNAE+V G ++N ++A ++L +T+LY R+ +NP Y
Sbjct: 1746 YYKKFLYEAFPVESHLHHYLHDNLNAEVVAGIIENKQDAVDYLTWTFLYRRLTQNPNYYN 1805
Query: 1582 LAADVLSRDKLLEERRADLIHSAATVLEKNNLVKYDRKSGYFQVTDLGRIASYYYITHGT 1403
L + L + ++L+ + + LE + V + +LG IASYYYI++ T
Sbjct: 1806 LQG---VTQRHLSDHLSELVENTLSDLEASKCVAIEDDMD-LSPLNLGMIASYYYISYTT 1861
Query: 1402 ISTYNEHLKPTMGDIELCRLFSLSEEFKYVTVRQDEKMELAKLLDRVPIPV-KESLEEPS 1226
I ++ L L + + + E+ + +R E+ + +L++ +P
Sbjct: 1862 IERFSSSLTSKTKMKGLLEILTHASEYSQLPIRPGEEEVVRRLINHQRFSFDNPKCTDPH 1921
Query: 1225 AKINVLLQAYISQLKLEGLSLTSDMVFITQSAGRLMRALFEIVLKRGWAQVAEKALNLCK 1046
K N LLQA+ ++ L G +L D + SA RL++A+ +++ GW +A A+ + +
Sbjct: 1922 VKANALLQAHFARQPLGG-NLALDQREVILSASRLLQAMVDVISSNGWLSLAVLAMEVSQ 1980
Query: 1045 MVGKQMWSVQMPLRQFHGIQKDLLTKLERK-----ELAWDRYYDLTSTEIGELIRQQKVG 881
MV + MW L Q K+L + + E +D +L E EL++
Sbjct: 1981 MVTQGMWDRDSMLLQLPHFTKELAKRCQENPGKSIETVFD-LVELDDDERRELLQMSDSQ 2039
Query: 880 KM-LHKYIHQFPKLNLAAHV 824
+ + ++ ++FP +++ V
Sbjct: 2040 LLDIARFCNRFPNIDMLYEV 2059
Score = 101 bits (251), Expect = 3e-18
Identities = 68/206 (33%), Positives = 111/206 (53%), Gaps = 8/206 (3%)
Frame = -1
Query: 595 PEKYPPPTELLDLQPLPVTALRNPAYEALYQEFKHFNPVQTQVFTVLYNTDDNVLVAAPT 416
P + P +L+ + +P A PA++ + Q N VQ++V+ DN+L+ APT
Sbjct: 481 PRPFSPDEKLVKISAMPEWA--QPAFKGMTQ----LNRVQSRVYETALFKADNILLCAPT 534
Query: 415 GSGKT------ICAEFAVLRNHQKGSNNVM--RVVYIAPMEALAKESYRDWERKFGKGLG 260
G+GKT I +FA+ N + GS N ++VY+APM+AL E + + K G
Sbjct: 535 GAGKTNVAVLTILQQFALNMNKEDGSINHSDYKIVYVAPMKALVAEVVGNLSNRL-KDYG 593
Query: 259 LRVVELTGETSTDLKLLEKGQIVISTPEKWDSLSRRWKHRKHIQQVSLFVIDEXXXXXXX 80
+ V EL+G+ + + +E+ QI+++TPEKWD ++R+ R + Q V L +IDE
Sbjct: 594 VTVRELSGDQTLTRQQIEETQIIVTTPEKWDIITRKSGDRTYTQLVKLLIIDEIHLLHDN 653
Query: 79 XXXXLEVIVSRMRYIASQSENKIRIV 2
LE IV+R +++ IR+V
Sbjct: 654 RGPVLESIVARTVRQIETTKDHIRLV 679
>ref|XP_008388784.1| PREDICTED: U5 small nuclear ribonucleoprotein 200 kDa helicase-like
[Malus domestica]
Length = 2180
Score = 1132 bits (2927), Expect = 0.0
Identities = 565/672 (84%), Positives = 606/672 (90%), Gaps = 25/672 (3%)
Frame = -1
Query: 1942 GVNLPAHTVIIKGTQIYNPEKGAWTELSPLDVMQMLGRAGRPQYDTYGEGIIITGHSELQ 1763
GVNLPAHTVIIKGTQIY+PEKGAWTELSPLDVMQMLGRAGRPQ+D+YGEGIIITGH+ELQ
Sbjct: 849 GVNLPAHTVIIKGTQIYDPEKGAWTELSPLDVMQMLGRAGRPQFDSYGEGIIITGHNELQ 908
Query: 1762 YYLSLMNAQLPIESQFVSKLADQLNAEIVLGTVQNAKEACNWLGYTYLYIRMLRNPTLYG 1583
YYLSLMN QLPIESQF+SKLADQLNAEIVLGTVQNA+EACNW+GYTYLY+RMLRNPTLYG
Sbjct: 909 YYLSLMNQQLPIESQFISKLADQLNAEIVLGTVQNAREACNWIGYTYLYVRMLRNPTLYG 968
Query: 1582 LAADVLSRDKLLEERRADLIHSAATVLEKNNLVKYDRKSGYFQVTDLGRIASYYYITHGT 1403
L ADVLSRD LEERRADLIHSAAT+L+K+NL+KYDRKSGYFQVTDLGRIASYYYITHGT
Sbjct: 969 LEADVLSRDITLEERRADLIHSAATILDKSNLIKYDRKSGYFQVTDLGRIASYYYITHGT 1028
Query: 1402 ISTYNEHLKPTMGDIELCRLFSLSEEFKYVTVRQDEKMELAKLLDRVPIPVKESLEEPSA 1223
ISTYNEHLKPTMGDIELCRLFSLSEEFKYVTVRQDEKMELAKLLDRVPIPVKESLEEPSA
Sbjct: 1029 ISTYNEHLKPTMGDIELCRLFSLSEEFKYVTVRQDEKMELAKLLDRVPIPVKESLEEPSA 1088
Query: 1222 KINVLLQAYISQLKLEGLSLTSDMVFITQSAGRLMRALFEIVLKRGWAQVAEKALNLCKM 1043
KINVLLQAYISQLKLEGLSLTSDMV+ITQSAGRL+RALFEIVLKRGWAQ+AEKALN+CKM
Sbjct: 1089 KINVLLQAYISQLKLEGLSLTSDMVYITQSAGRLLRALFEIVLKRGWAQLAEKALNMCKM 1148
Query: 1042 VGKQMWSVQMPLRQFHGIQKDLLTKLERKELAWDRYYDLTSTEIGELIRQQKVGKMLHKY 863
V K+MWSVQ PLRQF GI D+L KLE+K+LAWDRYYDL+S E+GELIR K+G+ LHK+
Sbjct: 1149 VNKKMWSVQTPLRQFTGIANDILMKLEKKDLAWDRYYDLSSQELGELIRMPKMGRTLHKF 1208
Query: 862 IHQFPKLNLAAHVQPITRTVLRVELTITPDFMWEDRVHG--------------------- 746
IHQFPKLNLAAHVQPITRTVLRVELTITPDF WED+VHG
Sbjct: 1209 IHQFPKLNLAAHVQPITRTVLRVELTITPDFQWEDKVHGYVEPFWVIVEDNDGEFVLHHE 1268
Query: 745 ----XXXXXXEDHTLSFTVPIYEPLPPQYFIRVVSDKWLNSQSVLPVSFRHLILPEKYPP 578
EDHTL+FTVPIYEPLPPQYFIRVVSD+WL SQ+VLPVSFRHLILPEKYPP
Sbjct: 1269 YFLLKKQYIDEDHTLNFTVPIYEPLPPQYFIRVVSDRWLGSQTVLPVSFRHLILPEKYPP 1328
Query: 577 PTELLDLQPLPVTALRNPAYEALYQEFKHFNPVQTQVFTVLYNTDDNVLVAAPTGSGKTI 398
PTELLDLQPLPVTALRNP YEALYQ+FKHFNPVQTQVFTVLYN+DDNVLVAAPTGSGKTI
Sbjct: 1329 PTELLDLQPLPVTALRNPLYEALYQDFKHFNPVQTQVFTVLYNSDDNVLVAAPTGSGKTI 1388
Query: 397 CAEFAVLRNHQKGSNNVMRVVYIAPMEALAKESYRDWERKFGKGLGLRVVELTGETSTDL 218
CAEFAVLR+HQK S+NVMRVVYIAP+EALAKE YRDWE+KFGKGL LRV LTGET+TDL
Sbjct: 1389 CAEFAVLRSHQKRSDNVMRVVYIAPIEALAKERYRDWEKKFGKGLNLRVELLTGETATDL 1448
Query: 217 KLLEKGQIVISTPEKWDSLSRRWKHRKHIQQVSLFVIDEXXXXXXXXXXXLEVIVSRMRY 38
KLLE+GQI+ISTPEKWD+LSRRWK RKH+QQVSLF+IDE LEVIVSRMRY
Sbjct: 1449 KLLERGQIIISTPEKWDALSRRWKQRKHVQQVSLFIIDELHLIGGQGGPILEVIVSRMRY 1508
Query: 37 IASQSENKIRIV 2
IASQ ENKIRIV
Sbjct: 1509 IASQXENKIRIV 1520
Score = 158 bits (400), Expect = 1e-35
Identities = 104/380 (27%), Positives = 187/380 (49%), Gaps = 7/380 (1%)
Frame = -1
Query: 1942 GVNLPAHTVIIKGTQIYNPEKGAWTELSPLDVMQMLGRAGRPQYDTYGEGIIITGHSELQ 1763
GV L AH V++ GTQ Y+ + T+ D++QM+G A RP D G+ +I+ +
Sbjct: 1687 GVPLSAHLVVVMGTQYYDGRENVHTDYPVTDLLQMMGHASRPLLDNSGKCVILCHAPRKE 1746
Query: 1762 YYLSLMNAQLPIESQFVSKLADQLNAEIVLGTVQNAKEACNWLGYTYLYIRMLRNPTLYG 1583
YY + P+ES L D LNAE+V G ++N ++A ++L +T+LY R+ +NP Y
Sbjct: 1747 YYKKFLYEAFPVESHLHHYLHDNLNAEVVAGIIENKQDAVDYLTWTFLYRRLTQNPNYYN 1806
Query: 1582 LAADVLSRDKLLEERRADLIHSAATVLEKNNLVKYDRKSGYFQVTDLGRIASYYYITHGT 1403
L + L + ++L+ + + LE + V + +LG IASYYYI++ T
Sbjct: 1807 LQG---VTQRHLSDHLSELVENTLSDLEASKCVAIEDDMD-LSPLNLGMIASYYYISYTT 1862
Query: 1402 ISTYNEHLKPTMGDIELCRLFSLSEEFKYVTVRQDEKMELAKLLDRVPIPV-KESLEEPS 1226
I ++ L L + + + E+ + +R E+ + +L++ +P
Sbjct: 1863 IERFSSSLTSKTKMKGLLEILTHASEYSQLPIRPGEEEVVRRLINHQRFSFDNPKCTDPH 1922
Query: 1225 AKINVLLQAYISQLKLEGLSLTSDMVFITQSAGRLMRALFEIVLKRGWAQVAEKALNLCK 1046
K N LLQA+ ++ L G +L D + SA RL++A+ +++ GW +A A+ + +
Sbjct: 1923 VKANALLQAHFARQPLGG-NLALDQREVILSASRLLQAMVDVISSNGWLSLAVLAMEVSQ 1981
Query: 1045 MVGKQMWSVQMPLRQFHGIQKDLLTKLERK-----ELAWDRYYDLTSTEIGELIRQQKVG 881
MV + MW L Q K+L + + E +D +L E EL++
Sbjct: 1982 MVTQGMWDRDSMLLQLPHFTKELAKRCQENPGKSIETVFD-LVELDDEERRELLQMSDSQ 2040
Query: 880 KM-LHKYIHQFPKLNLAAHV 824
+ + ++ ++FP +++ V
Sbjct: 2041 LLDIARFCNRFPNIDMLYEV 2060
Score = 101 bits (251), Expect = 3e-18
Identities = 68/206 (33%), Positives = 111/206 (53%), Gaps = 8/206 (3%)
Frame = -1
Query: 595 PEKYPPPTELLDLQPLPVTALRNPAYEALYQEFKHFNPVQTQVFTVLYNTDDNVLVAAPT 416
P + P +L+ + +P A PA++ + Q N VQ++V+ DN+L+ APT
Sbjct: 482 PRPFSPDEKLVKISAMPEWA--QPAFKGMTQ----LNRVQSRVYETALFKADNILLCAPT 535
Query: 415 GSGKT------ICAEFAVLRNHQKGSNNVM--RVVYIAPMEALAKESYRDWERKFGKGLG 260
G+GKT I +FA+ N + GS N ++VY+APM+AL E + + K G
Sbjct: 536 GAGKTNVAVLTILQQFALNMNKEDGSINHSDYKIVYVAPMKALVAEVVGNLSNRL-KDYG 594
Query: 259 LRVVELTGETSTDLKLLEKGQIVISTPEKWDSLSRRWKHRKHIQQVSLFVIDEXXXXXXX 80
+ V EL+G+ + + +E+ QI+++TPEKWD ++R+ R + Q V L +IDE
Sbjct: 595 VTVRELSGDQTLTRQQIEETQIIVTTPEKWDIITRKSGDRTYTQLVKLLIIDEIHLLHDN 654
Query: 79 XXXXLEVIVSRMRYIASQSENKIRIV 2
LE IV+R +++ IR+V
Sbjct: 655 RGPVLESIVARTVRQIETTKDHIRLV 680
>ref|XP_004488845.1| PREDICTED: U5 small nuclear ribonucleoprotein 200 kDa helicase [Cicer
arietinum] gi|502089221|ref|XP_004488846.1| PREDICTED: U5
small nuclear ribonucleoprotein 200 kDa helicase [Cicer
arietinum]
Length = 2187
Score = 1132 bits (2927), Expect = 0.0
Identities = 561/672 (83%), Positives = 609/672 (90%), Gaps = 25/672 (3%)
Frame = -1
Query: 1942 GVNLPAHTVIIKGTQIYNPEKGAWTELSPLDVMQMLGRAGRPQYDTYGEGIIITGHSELQ 1763
GVNLPAHTVIIKGTQIYNPEKGAWTELSPLDVMQMLGRAGRPQYD+YGEGII+TGHSELQ
Sbjct: 858 GVNLPAHTVIIKGTQIYNPEKGAWTELSPLDVMQMLGRAGRPQYDSYGEGIIVTGHSELQ 917
Query: 1762 YYLSLMNAQLPIESQFVSKLADQLNAEIVLGTVQNAKEACNWLGYTYLYIRMLRNPTLYG 1583
YYLSLMN QLPIESQF+SKLADQLNAEIVLGTVQNAKEAC+W+GYTYLY+RMLRNP+LYG
Sbjct: 918 YYLSLMNQQLPIESQFISKLADQLNAEIVLGTVQNAKEACHWIGYTYLYVRMLRNPSLYG 977
Query: 1582 LAADVLSRDKLLEERRADLIHSAATVLEKNNLVKYDRKSGYFQVTDLGRIASYYYITHGT 1403
+A DVL++D LEERRADLIH+AAT+L++NNLVKYDRKSGYFQVTDLGRIASYYYITHGT
Sbjct: 978 IAPDVLTKDITLEERRADLIHTAATILDRNNLVKYDRKSGYFQVTDLGRIASYYYITHGT 1037
Query: 1402 ISTYNEHLKPTMGDIELCRLFSLSEEFKYVTVRQDEKMELAKLLDRVPIPVKESLEEPSA 1223
ISTYNEHLKPTMGDIELCRLFSLSEEFKYVTVRQDEKMELAKLLDRVPIP+KESLEEPSA
Sbjct: 1038 ISTYNEHLKPTMGDIELCRLFSLSEEFKYVTVRQDEKMELAKLLDRVPIPIKESLEEPSA 1097
Query: 1222 KINVLLQAYISQLKLEGLSLTSDMVFITQSAGRLMRALFEIVLKRGWAQVAEKALNLCKM 1043
KINVLLQAYISQLKLEGLS+TSDMVFITQSAGRL+RALFEIV+KRGWAQ+AEKALNLCKM
Sbjct: 1098 KINVLLQAYISQLKLEGLSMTSDMVFITQSAGRLLRALFEIVVKRGWAQLAEKALNLCKM 1157
Query: 1042 VGKQMWSVQMPLRQFHGIQKDLLTKLERKELAWDRYYDLTSTEIGELIRQQKVGKMLHKY 863
V K+MWSVQ PLRQF+GI D+LTKLE+K+LAW+RYYDL+S EIGELIR K+G+ LHK+
Sbjct: 1158 VTKRMWSVQTPLRQFNGIPNDILTKLEKKDLAWERYYDLSSQEIGELIRAPKMGRTLHKF 1217
Query: 862 IHQFPKLNLAAHVQPITRTVLRVELTITPDFMWEDRVHG--------------------- 746
IHQFPKLNLAAHVQPITRTVL VELT+TPDF W+DR+HG
Sbjct: 1218 IHQFPKLNLAAHVQPITRTVLGVELTVTPDFAWDDRIHGYVEPFWVIVEDNDGEYILHHE 1277
Query: 745 ----XXXXXXEDHTLSFTVPIYEPLPPQYFIRVVSDKWLNSQSVLPVSFRHLILPEKYPP 578
EDHTL+FTVPIYEPLPPQYFIRVVSDKWL SQ+VLPVSFRHLILPEKYPP
Sbjct: 1278 YFLLKKQYIEEDHTLNFTVPIYEPLPPQYFIRVVSDKWLGSQTVLPVSFRHLILPEKYPP 1337
Query: 577 PTELLDLQPLPVTALRNPAYEALYQEFKHFNPVQTQVFTVLYNTDDNVLVAAPTGSGKTI 398
PTELLDLQPLPVTALRNP+YEALYQEFKHFNPVQTQVFTVLYN+DDNVLVAAPTGSGKTI
Sbjct: 1338 PTELLDLQPLPVTALRNPSYEALYQEFKHFNPVQTQVFTVLYNSDDNVLVAAPTGSGKTI 1397
Query: 397 CAEFAVLRNHQKGSNNVMRVVYIAPMEALAKESYRDWERKFGKGLGLRVVELTGETSTDL 218
CAEFA+LRNHQKG ++VMRVVYIAP+EALAKE YRDW++KFG GL LRVVELTGET+TD+
Sbjct: 1398 CAEFAILRNHQKGPDSVMRVVYIAPIEALAKERYRDWKKKFGGGLELRVVELTGETATDV 1457
Query: 217 KLLEKGQIVISTPEKWDSLSRRWKHRKHIQQVSLFVIDEXXXXXXXXXXXLEVIVSRMRY 38
KLLEKGQI+ISTPEKWD+LSRRWK RKH+QQVSLF+IDE LEVIVSRMRY
Sbjct: 1458 KLLEKGQIIISTPEKWDALSRRWKQRKHVQQVSLFIIDELHLIGGQGGPVLEVIVSRMRY 1517
Query: 37 IASQSENKIRIV 2
IASQ ENKIRIV
Sbjct: 1518 IASQVENKIRIV 1529
Score = 162 bits (410), Expect = 1e-36
Identities = 107/381 (28%), Positives = 191/381 (50%), Gaps = 8/381 (2%)
Frame = -1
Query: 1942 GVNLPAHTVIIKGTQIYNPEKGAWTELSPLDVMQMLGRAGRPQYDTYGEGIIITGHSELQ 1763
GV L AH V++ GTQ Y+ + A T+ D++QM+G A RP D G+ +I+ +
Sbjct: 1695 GVTLSAHLVVVMGTQYYDGRENAQTDYPVTDLLQMMGHASRPLVDNSGKCVILCHAPRKE 1754
Query: 1762 YYLSLMNAQLPIESQFVSKLADQLNAEIVLGTVQNAKEACNWLGYTYLYIRMLRNPTLYG 1583
YY + P+ES L D LNAEIV G ++N ++A ++L +T++Y R+ +NP Y
Sbjct: 1755 YYKKFLYEAFPVESHLHHFLHDNLNAEIVAGIIENKQDAVDYLTWTFMYRRLTQNPNYYN 1814
Query: 1582 LAADVLSRDKLLEERRADLIHSAATVLEKNNLVKYDRKSGYFQVTDLGRIASYYYITHGT 1403
L + L + ++++ + + LE + V + +LG IASYYYI++ T
Sbjct: 1815 LQG---VSHRHLSDHLSEMVENTLSDLEASKCVAIEDDMD-LSPLNLGMIASYYYISYTT 1870
Query: 1402 ISTYNEHLKPTMGDIELCRLFSLSEEFKYVTVRQDEKMELAKLLDRVPIPVKE-SLEEPS 1226
I ++ L L + S + E+ ++ +R E + +L++ + + +P
Sbjct: 1871 IERFSSSLTSKTKMKGLLEVLSSASEYAHLPIRPGEDELVRRLINHQRFSFENPKVTDPH 1930
Query: 1225 AKINVLLQAYISQLKLEGLSLTSDMVFITQSAGRLMRALFEIVLKRGWAQVAEKALNLCK 1046
K N LLQA+ S+ + G +L D + SA RL++A+ +++ GW +A A+ + +
Sbjct: 1931 VKANALLQAHFSR-QFVGGNLALDQREVLLSANRLLQAMVDVISSNGWLTMALLAMEVSQ 1989
Query: 1045 MVGKQMWSVQMPLRQFHGIQKDLLTKL-ERKELAWDRYYDLTSTEIGELIRQQKVGKM-- 875
MV + MW L Q KDL K E + + +DL E E R++ +
Sbjct: 1990 MVTQGMWERDSMLLQLPHFTKDLAKKCQENPGRSIETVFDLLEMEDDE--RRELLNMTDS 2047
Query: 874 ----LHKYIHQFPKLNLAAHV 824
+ ++ ++FP ++L+ +
Sbjct: 2048 QLLDIARFCNRFPNIDLSYEI 2068
Score = 94.7 bits (234), Expect = 3e-16
Identities = 66/201 (32%), Positives = 107/201 (53%), Gaps = 8/201 (3%)
Frame = -1
Query: 580 PPTELLDLQPLPVTALRNPAYEALYQEFKHFNPVQTQVFTVLYNTDDNVLVAAPTGSGKT 401
P +L+ + +P A PA++ + Q N VQ++V+ DN+L+ APTG+GKT
Sbjct: 496 PNEKLVKISAMPDWA--QPAFKGMTQ----LNRVQSKVYETALFKPDNLLLCAPTGAGKT 549
Query: 400 ICAEFAVL------RNHQKGS--NNVMRVVYIAPMEALAKESYRDWERKFGKGLGLRVVE 245
A +L RN GS + ++VY+APM+AL E + + K ++V E
Sbjct: 550 NVAVLTILQQIARHRNPNDGSIDHTAYKIVYVAPMKALVAEVVGNLSNRLEK-YDVKVRE 608
Query: 244 LTGETSTDLKLLEKGQIVISTPEKWDSLSRRWKHRKHIQQVSLFVIDEXXXXXXXXXXXL 65
L+G+ S + +E+ QI+++TPEKWD ++R+ R + Q V L +IDE L
Sbjct: 609 LSGDQSLTRQQIEETQIIVTTPEKWDIITRKSGDRTYTQLVKLLIIDEIHLLHDNRGPVL 668
Query: 64 EVIVSRMRYIASQSENKIRIV 2
E IV+R +++ IR+V
Sbjct: 669 ESIVARTVRQIETTKDYIRLV 689
>ref|XP_006598183.1| PREDICTED: U5 small nuclear ribonucleoprotein 200 kDa helicase-like
isoform X1 [Glycine max] gi|947064385|gb|KRH13646.1|
hypothetical protein GLYMA_15G253800 [Glycine max]
gi|947064386|gb|KRH13647.1| hypothetical protein
GLYMA_15G253800 [Glycine max]
Length = 2183
Score = 1130 bits (2924), Expect = 0.0
Identities = 560/672 (83%), Positives = 609/672 (90%), Gaps = 25/672 (3%)
Frame = -1
Query: 1942 GVNLPAHTVIIKGTQIYNPEKGAWTELSPLDVMQMLGRAGRPQYDTYGEGIIITGHSELQ 1763
GVNLPAHTVIIKGTQIYNPEKGAWTELSPLDVMQMLGRAGRPQYD+YGEGII+TGHSELQ
Sbjct: 854 GVNLPAHTVIIKGTQIYNPEKGAWTELSPLDVMQMLGRAGRPQYDSYGEGIIVTGHSELQ 913
Query: 1762 YYLSLMNAQLPIESQFVSKLADQLNAEIVLGTVQNAKEACNWLGYTYLYIRMLRNPTLYG 1583
YYLSLMN QLPIESQFVSKLADQLNAEIVLGTVQNA+EACNW+GYTYLY+RMLRNP+LYG
Sbjct: 914 YYLSLMNQQLPIESQFVSKLADQLNAEIVLGTVQNAREACNWIGYTYLYVRMLRNPSLYG 973
Query: 1582 LAADVLSRDKLLEERRADLIHSAATVLEKNNLVKYDRKSGYFQVTDLGRIASYYYITHGT 1403
+A DVL+RD LEERRADLIH+AAT+L++NNLVKYDRKSGYFQVTDLGRIASYYYITHG+
Sbjct: 974 IAPDVLTRDITLEERRADLIHTAATILDRNNLVKYDRKSGYFQVTDLGRIASYYYITHGS 1033
Query: 1402 ISTYNEHLKPTMGDIELCRLFSLSEEFKYVTVRQDEKMELAKLLDRVPIPVKESLEEPSA 1223
ISTYNEHLKPTMGDIELCRLFSLSEEFKYVTVRQDEKMELAKLLDRVPIP+KESLEEPSA
Sbjct: 1034 ISTYNEHLKPTMGDIELCRLFSLSEEFKYVTVRQDEKMELAKLLDRVPIPIKESLEEPSA 1093
Query: 1222 KINVLLQAYISQLKLEGLSLTSDMVFITQSAGRLMRALFEIVLKRGWAQVAEKALNLCKM 1043
KINVLLQAYISQLKLEGLSLTSDMVFITQSAGRL+RALFEIVLKRGWAQ+AEKALNLCKM
Sbjct: 1094 KINVLLQAYISQLKLEGLSLTSDMVFITQSAGRLLRALFEIVLKRGWAQLAEKALNLCKM 1153
Query: 1042 VGKQMWSVQMPLRQFHGIQKDLLTKLERKELAWDRYYDLTSTEIGELIRQQKVGKMLHKY 863
V K+MWSVQ PLRQF+GI DLLTKLE+K+LAW+RYYDL+S EIGELIR K+G+ LHK+
Sbjct: 1154 VTKRMWSVQTPLRQFNGIPSDLLTKLEKKDLAWERYYDLSSQEIGELIRAPKMGRTLHKF 1213
Query: 862 IHQFPKLNLAAHVQPITRTVLRVELTITPDFMWEDRVHG--------------------- 746
IHQFPKLNLAAHVQPITRTVLRVELTITPDF W+DR+HG
Sbjct: 1214 IHQFPKLNLAAHVQPITRTVLRVELTITPDFAWDDRIHGYVEPFWVIVEDNDGEYILHHE 1273
Query: 745 ----XXXXXXEDHTLSFTVPIYEPLPPQYFIRVVSDKWLNSQSVLPVSFRHLILPEKYPP 578
EDHTL+FTVPIYEPLPPQYFIRVVSD+WL SQ+VLPVSFRHLILPEKYPP
Sbjct: 1274 YFMLKKQYIDEDHTLNFTVPIYEPLPPQYFIRVVSDRWLGSQTVLPVSFRHLILPEKYPP 1333
Query: 577 PTELLDLQPLPVTALRNPAYEALYQEFKHFNPVQTQVFTVLYNTDDNVLVAAPTGSGKTI 398
PTELLDLQPLPVTALRNP+YE+LY++FKHFNPVQTQVFTVLYN+DDNVLVAAPTGSGKTI
Sbjct: 1334 PTELLDLQPLPVTALRNPSYESLYKDFKHFNPVQTQVFTVLYNSDDNVLVAAPTGSGKTI 1393
Query: 397 CAEFAVLRNHQKGSNNVMRVVYIAPMEALAKESYRDWERKFGKGLGLRVVELTGETSTDL 218
CAEFA+LRNHQK ++VMRVVY+AP+E+LAKE YRDWE+KFG GL LRVVELTGET+TDL
Sbjct: 1394 CAEFAILRNHQKWPDSVMRVVYVAPIESLAKERYRDWEKKFGGGLKLRVVELTGETATDL 1453
Query: 217 KLLEKGQIVISTPEKWDSLSRRWKHRKHIQQVSLFVIDEXXXXXXXXXXXLEVIVSRMRY 38
KLLEKGQI+ISTPEKWD+LSRRWK RKH+QQVSLF+IDE LEV+VSRMRY
Sbjct: 1454 KLLEKGQIIISTPEKWDALSRRWKQRKHVQQVSLFIIDELHLIGGQGGPILEVVVSRMRY 1513
Query: 37 IASQSENKIRIV 2
IASQ ENKIR+V
Sbjct: 1514 IASQVENKIRVV 1525
Score = 166 bits (420), Expect = 7e-38
Identities = 109/381 (28%), Positives = 192/381 (50%), Gaps = 8/381 (2%)
Frame = -1
Query: 1942 GVNLPAHTVIIKGTQIYNPEKGAWTELSPLDVMQMLGRAGRPQYDTYGEGIIITGHSELQ 1763
GV L AH V++ GTQ Y+ + A T+ D++QM+G A RP D G+ +I+ +
Sbjct: 1691 GVTLSAHLVVVMGTQYYDGRENAQTDYPVTDLLQMMGHASRPLVDNSGKCVILCHAPRKE 1750
Query: 1762 YYLSLMNAQLPIESQFVSKLADQLNAEIVLGTVQNAKEACNWLGYTYLYIRMLRNPTLYG 1583
YY + P+ES L D LNAEIV G ++N ++A ++L +T++Y R+ +NP Y
Sbjct: 1751 YYKKFLYEAFPVESHLHHFLHDNLNAEIVAGIIENKQDAVDYLTWTFMYRRLTQNPNYYN 1810
Query: 1582 LAADVLSRDKLLEERRADLIHSAATVLEKNNLVKYDRKSGYFQVTDLGRIASYYYITHGT 1403
L + L + ++++ + + LE + + + +LG IASYYYI++ T
Sbjct: 1811 LQG---VSHRHLSDHLSEMVENTLSDLEAGKCITIEDDMELAPL-NLGMIASYYYISYTT 1866
Query: 1402 ISTYNEHLKPTMGDIELCRLFSLSEEFKYVTVRQDEKMELAKLLDRVPIPVKE-SLEEPS 1226
I ++ + L + S + E+ + +R E+ + KL++ + + +P
Sbjct: 1867 IERFSSSVTSKTKMKGLLEILSSASEYAQLPIRPGEEEVVRKLINHQRFSFENPKVTDPH 1926
Query: 1225 AKINVLLQAYISQLKLEGLSLTSDMVFITQSAGRLMRALFEIVLKRGWAQVAEKALNLCK 1046
K N LLQA+ S+ + G +L D + SA RL++A+ +++ GW +A A+ + +
Sbjct: 1927 VKTNALLQAHFSR-QFVGGNLALDQKEVLLSANRLLQAMVDVISSNGWLGLALLAMEVSQ 1985
Query: 1045 MVGKQMWSVQMPLRQFHGIQKDLLTKL-ERKELAWDRYYDLTSTEIGELIRQQKVGKM-- 875
MV + MW L Q KDL K E + + +DL E E RQ+ +G
Sbjct: 1986 MVTQGMWERDSMLLQLPHFTKDLAKKCQENPGKSIETVFDLLEMEDNE--RQELLGMSDS 2043
Query: 874 ----LHKYIHQFPKLNLAAHV 824
+ ++ ++FP ++L+ V
Sbjct: 2044 QLLDIARFCNRFPNIDLSYEV 2064
Score = 94.4 bits (233), Expect = 3e-16
Identities = 65/201 (32%), Positives = 109/201 (54%), Gaps = 8/201 (3%)
Frame = -1
Query: 580 PPTELLDLQPLPVTALRNPAYEALYQEFKHFNPVQTQVFTVLYNTDDNVLVAAPTGSGKT 401
P +L+ + +P A PA++ + Q N VQ++V+ DN+L+ APTG+GKT
Sbjct: 492 PNEKLVKISSMPDWA--QPAFKGMTQ----LNRVQSKVYETALFQPDNLLLCAPTGAGKT 545
Query: 400 ICAEFAVL------RNHQKGS--NNVMRVVYIAPMEALAKESYRDWERKFGKGLGLRVVE 245
A +L RN + GS ++ ++VY+APM+AL E + + + ++V E
Sbjct: 546 NVAVLTILQQIARHRNPKDGSIDHSAYKIVYVAPMKALVAEVVGNLSNRL-QDYDVKVRE 604
Query: 244 LTGETSTDLKLLEKGQIVISTPEKWDSLSRRWKHRKHIQQVSLFVIDEXXXXXXXXXXXL 65
L+G+ S + +E+ QI+++TPEKWD ++R+ R + Q V L +IDE L
Sbjct: 605 LSGDQSLTRQQIEETQIIVTTPEKWDIITRKSGDRTYTQLVKLLIIDEIHLLHDNRGPVL 664
Query: 64 EVIVSRMRYIASQSENKIRIV 2
E IV+R +++ IR+V
Sbjct: 665 ESIVARTVRQIETTKDYIRLV 685
>gb|KJB73065.1| hypothetical protein B456_011G217300 [Gossypium raimondii]
Length = 2053
Score = 1130 bits (2922), Expect = 0.0
Identities = 561/672 (83%), Positives = 606/672 (90%), Gaps = 25/672 (3%)
Frame = -1
Query: 1942 GVNLPAHTVIIKGTQIYNPEKGAWTELSPLDVMQMLGRAGRPQYDTYGEGIIITGHSELQ 1763
GVNLPAHTVIIKGTQIY+PEKGAWTELSPLDVMQMLGRAGRPQYD+YGEGIIITGHSELQ
Sbjct: 722 GVNLPAHTVIIKGTQIYSPEKGAWTELSPLDVMQMLGRAGRPQYDSYGEGIIITGHSELQ 781
Query: 1762 YYLSLMNAQLPIESQFVSKLADQLNAEIVLGTVQNAKEACNWLGYTYLYIRMLRNPTLYG 1583
YYLSLMN QLPIESQF+SKLADQLNAEIVLGTVQNA+EACNW+GYTYLYIRMLRNPTLYG
Sbjct: 782 YYLSLMNQQLPIESQFISKLADQLNAEIVLGTVQNAREACNWIGYTYLYIRMLRNPTLYG 841
Query: 1582 LAADVLSRDKLLEERRADLIHSAATVLEKNNLVKYDRKSGYFQVTDLGRIASYYYITHGT 1403
L ADVLSRD LEERRADLIHSAAT+L+KNNLVKYDRKSGYFQVTDLGRIASYYYITHGT
Sbjct: 842 LPADVLSRDLTLEERRADLIHSAATILDKNNLVKYDRKSGYFQVTDLGRIASYYYITHGT 901
Query: 1402 ISTYNEHLKPTMGDIELCRLFSLSEEFKYVTVRQDEKMELAKLLDRVPIPVKESLEEPSA 1223
ISTYNEHLKPTMGDIELCRLFSLSEEF+YVTVRQDEKMELAKLLDRVPIP+KESLEEPSA
Sbjct: 902 ISTYNEHLKPTMGDIELCRLFSLSEEFRYVTVRQDEKMELAKLLDRVPIPIKESLEEPSA 961
Query: 1222 KINVLLQAYISQLKLEGLSLTSDMVFITQSAGRLMRALFEIVLKRGWAQVAEKALNLCKM 1043
KINVLLQAYISQLKLEGLSLTSDMV+ITQSAGRL+RALFEIVLKRGWAQ+AEKALNLCKM
Sbjct: 962 KINVLLQAYISQLKLEGLSLTSDMVYITQSAGRLLRALFEIVLKRGWAQLAEKALNLCKM 1021
Query: 1042 VGKQMWSVQMPLRQFHGIQKDLLTKLERKELAWDRYYDLTSTEIGELIRQQKVGKMLHKY 863
V K+MW+VQ PLRQF+GI ++L KLE+K+LAWDRYYDL+S EIGELIR K+G+ L+++
Sbjct: 1022 VTKRMWNVQTPLRQFNGIPNEILMKLEKKDLAWDRYYDLSSQEIGELIRYPKMGRTLYRF 1081
Query: 862 IHQFPKLNLAAHVQPITRTVLRVELTITPDFMWEDRVHG--------------------- 746
IHQFPKLNLAAHVQPITRTVLRVELTITPDF WED+VHG
Sbjct: 1082 IHQFPKLNLAAHVQPITRTVLRVELTITPDFQWEDKVHGYVEPFWVIIEDNDGEYILHHE 1141
Query: 745 ----XXXXXXEDHTLSFTVPIYEPLPPQYFIRVVSDKWLNSQSVLPVSFRHLILPEKYPP 578
EDHTL+FTVPIYEPLPPQYFIRVVSDKWL SQ+VLP+SFRHLILPEKYPP
Sbjct: 1142 YFLLKKQYIDEDHTLNFTVPIYEPLPPQYFIRVVSDKWLGSQTVLPISFRHLILPEKYPP 1201
Query: 577 PTELLDLQPLPVTALRNPAYEALYQEFKHFNPVQTQVFTVLYNTDDNVLVAAPTGSGKTI 398
PTELLDLQPLPVTALRNP+YEALYQ+FKHFNPVQTQVFTVLYNTDDNVLVAAPTGSGKTI
Sbjct: 1202 PTELLDLQPLPVTALRNPSYEALYQDFKHFNPVQTQVFTVLYNTDDNVLVAAPTGSGKTI 1261
Query: 397 CAEFAVLRNHQKGSNNVMRVVYIAPMEALAKESYRDWERKFGKGLGLRVVELTGETSTDL 218
CAEFA+LRNHQKG ++ +RVVYIAP+EA+AKE YRDWERKFGKGLG+RVVELTGE + DL
Sbjct: 1262 CAEFAILRNHQKGPDSTLRVVYIAPLEAIAKERYRDWERKFGKGLGMRVVELTGELAMDL 1321
Query: 217 KLLEKGQIVISTPEKWDSLSRRWKHRKHIQQVSLFVIDEXXXXXXXXXXXLEVIVSRMRY 38
KLLEKGQ++ISTPEKWD+LSRRWK RK +QQVSLF++DE LEVIVSRMRY
Sbjct: 1322 KLLEKGQVIISTPEKWDALSRRWKQRKFVQQVSLFIVDELHLIGGQGGPVLEVIVSRMRY 1381
Query: 37 IASQSENKIRIV 2
IASQ E KIRIV
Sbjct: 1382 IASQVEKKIRIV 1393
Score = 153 bits (387), Expect = 5e-34
Identities = 103/380 (27%), Positives = 187/380 (49%), Gaps = 7/380 (1%)
Frame = -1
Query: 1942 GVNLPAHTVIIKGTQIYNPEKGAWTELSPLDVMQMLGRAGRPQYDTYGEGIIITGHSELQ 1763
GV L AH V++ GTQ Y+ + A T+ D++QM+G A RP D G+ +I+ +
Sbjct: 1560 GVPLSAHLVVVMGTQYYDGRENAHTDYPVTDLLQMMGHASRPLLDNSGKCVILCHAPRKE 1619
Query: 1762 YYLSLMNAQLPIESQFVSKLADQLNAEIVLGTVQNAKEACNWLGYTYLYIRMLRNPTLYG 1583
YY + P+ES L D NAEIV ++N ++A ++L +T++Y R+ +NP Y
Sbjct: 1620 YYKKFLYEAFPVESHLHHFLHDNFNAEIVATVIENKQDAVDYLTWTFMYRRLTQNPNYYN 1679
Query: 1582 LAADVLSRDKLLEERRADLIHSAATVLEKNNLVKYDRKSGYFQVTDLGRIASYYYITHGT 1403
L + L + ++L+ + LE + + + +LG IASYYYI++ T
Sbjct: 1680 LQG---VSHRHLSDHLSELVENTLNDLEASKCITIEDDMD-LSPLNLGMIASYYYISYTT 1735
Query: 1402 ISTYNEHLKPTMGDIELCRLFSLSEEFKYVTVRQDEKMELAKLLDRVPIPV-KESLEEPS 1226
I ++ L L + + + E+ + +R E+ L +L++ +P
Sbjct: 1736 IERFSSSLTSKTKMKGLLEILASASEYANLPIRPGEEEVLRRLINHQRFSFDNPRCTDPH 1795
Query: 1225 AKINVLLQAYISQLKLEGLSLTSDMVFITQSAGRLMRALFEIVLKRGWAQVAEKALNLCK 1046
K N LLQA+ S+ + G +L+ D + A RL++A+ +++ GW +A A+ + +
Sbjct: 1796 VKANALLQAHFSRQHVGG-NLSLDQREVLLFATRLLQAMVDVISSNGWLSLALLAMEVSQ 1854
Query: 1045 MVGKQMWSVQMPLRQFHGIQKDLLTKLERK-----ELAWDRYYDLTSTEIGELIRQQKVG 881
MV + MW L Q K+L + + E +D ++ E EL++ +
Sbjct: 1855 MVTQGMWERDSMLLQLPYFTKELAKRCQENPGKNIETIFD-LVEMEDDERRELLQMSDLQ 1913
Query: 880 KM-LHKYIHQFPKLNLAAHV 824
+ + K+ ++FP ++L+ V
Sbjct: 1914 LLDIAKFCNRFPNIDLSYEV 1933
Score = 90.1 bits (222), Expect = 6e-15
Identities = 72/232 (31%), Positives = 118/232 (50%), Gaps = 19/232 (8%)
Frame = -1
Query: 640 NSQSVLPV-SFRH-------LILPEKYPPPTE----LLDLQPLPVTALRNPAYEALYQEF 497
N + LPV S+RH + +P P E L+ + +P A PA++ + Q
Sbjct: 329 NKKCDLPVGSYRHHSKGYEEVHVPALKAKPLESNERLVKISEMPDWA--QPAFKGMQQ-- 384
Query: 496 KHFNPVQTQVFTVLYNTDDNVLVAAPTGSGKTICAEFAVLRN-----HQKGSNNV--MRV 338
N VQ++V+ + DN+L+ APTG+GKT A +L+ GS N ++
Sbjct: 385 --LNRVQSKVYETALFSADNILLCAPTGAGKTNVAVLTILQQLALNMDADGSINHGNYKI 442
Query: 337 VYIAPMEALAKESYRDWERKFGKGLGLRVVELTGETSTDLKLLEKGQIVISTPEKWDSLS 158
VY+APM+AL E + + + G+ V EL+G+ + + +++ QI+++TPEKWD ++
Sbjct: 443 VYVAPMKALVAEVVGNLSHRL-EAYGVTVRELSGDQTLTRQQIDETQIIVTTPEKWDIIT 501
Query: 157 RRWKHRKHIQQVSLFVIDEXXXXXXXXXXXLEVIVSRMRYIASQSENKIRIV 2
R+ R + Q V L +IDE LE IV+R ++ IR+V
Sbjct: 502 RKSGDRTYTQLVKLIIIDEIHLLHDNRGPVLESIVARTVRQIETTKEHIRLV 553
>ref|XP_012454175.1| PREDICTED: U5 small nuclear ribonucleoprotein 200 kDa helicase-like
[Gossypium raimondii] gi|763806125|gb|KJB73063.1|
hypothetical protein B456_011G217300 [Gossypium
raimondii] gi|763806126|gb|KJB73064.1| hypothetical
protein B456_011G217300 [Gossypium raimondii]
Length = 2177
Score = 1130 bits (2922), Expect = 0.0
Identities = 561/672 (83%), Positives = 606/672 (90%), Gaps = 25/672 (3%)
Frame = -1
Query: 1942 GVNLPAHTVIIKGTQIYNPEKGAWTELSPLDVMQMLGRAGRPQYDTYGEGIIITGHSELQ 1763
GVNLPAHTVIIKGTQIY+PEKGAWTELSPLDVMQMLGRAGRPQYD+YGEGIIITGHSELQ
Sbjct: 846 GVNLPAHTVIIKGTQIYSPEKGAWTELSPLDVMQMLGRAGRPQYDSYGEGIIITGHSELQ 905
Query: 1762 YYLSLMNAQLPIESQFVSKLADQLNAEIVLGTVQNAKEACNWLGYTYLYIRMLRNPTLYG 1583
YYLSLMN QLPIESQF+SKLADQLNAEIVLGTVQNA+EACNW+GYTYLYIRMLRNPTLYG
Sbjct: 906 YYLSLMNQQLPIESQFISKLADQLNAEIVLGTVQNAREACNWIGYTYLYIRMLRNPTLYG 965
Query: 1582 LAADVLSRDKLLEERRADLIHSAATVLEKNNLVKYDRKSGYFQVTDLGRIASYYYITHGT 1403
L ADVLSRD LEERRADLIHSAAT+L+KNNLVKYDRKSGYFQVTDLGRIASYYYITHGT
Sbjct: 966 LPADVLSRDLTLEERRADLIHSAATILDKNNLVKYDRKSGYFQVTDLGRIASYYYITHGT 1025
Query: 1402 ISTYNEHLKPTMGDIELCRLFSLSEEFKYVTVRQDEKMELAKLLDRVPIPVKESLEEPSA 1223
ISTYNEHLKPTMGDIELCRLFSLSEEF+YVTVRQDEKMELAKLLDRVPIP+KESLEEPSA
Sbjct: 1026 ISTYNEHLKPTMGDIELCRLFSLSEEFRYVTVRQDEKMELAKLLDRVPIPIKESLEEPSA 1085
Query: 1222 KINVLLQAYISQLKLEGLSLTSDMVFITQSAGRLMRALFEIVLKRGWAQVAEKALNLCKM 1043
KINVLLQAYISQLKLEGLSLTSDMV+ITQSAGRL+RALFEIVLKRGWAQ+AEKALNLCKM
Sbjct: 1086 KINVLLQAYISQLKLEGLSLTSDMVYITQSAGRLLRALFEIVLKRGWAQLAEKALNLCKM 1145
Query: 1042 VGKQMWSVQMPLRQFHGIQKDLLTKLERKELAWDRYYDLTSTEIGELIRQQKVGKMLHKY 863
V K+MW+VQ PLRQF+GI ++L KLE+K+LAWDRYYDL+S EIGELIR K+G+ L+++
Sbjct: 1146 VTKRMWNVQTPLRQFNGIPNEILMKLEKKDLAWDRYYDLSSQEIGELIRYPKMGRTLYRF 1205
Query: 862 IHQFPKLNLAAHVQPITRTVLRVELTITPDFMWEDRVHG--------------------- 746
IHQFPKLNLAAHVQPITRTVLRVELTITPDF WED+VHG
Sbjct: 1206 IHQFPKLNLAAHVQPITRTVLRVELTITPDFQWEDKVHGYVEPFWVIIEDNDGEYILHHE 1265
Query: 745 ----XXXXXXEDHTLSFTVPIYEPLPPQYFIRVVSDKWLNSQSVLPVSFRHLILPEKYPP 578
EDHTL+FTVPIYEPLPPQYFIRVVSDKWL SQ+VLP+SFRHLILPEKYPP
Sbjct: 1266 YFLLKKQYIDEDHTLNFTVPIYEPLPPQYFIRVVSDKWLGSQTVLPISFRHLILPEKYPP 1325
Query: 577 PTELLDLQPLPVTALRNPAYEALYQEFKHFNPVQTQVFTVLYNTDDNVLVAAPTGSGKTI 398
PTELLDLQPLPVTALRNP+YEALYQ+FKHFNPVQTQVFTVLYNTDDNVLVAAPTGSGKTI
Sbjct: 1326 PTELLDLQPLPVTALRNPSYEALYQDFKHFNPVQTQVFTVLYNTDDNVLVAAPTGSGKTI 1385
Query: 397 CAEFAVLRNHQKGSNNVMRVVYIAPMEALAKESYRDWERKFGKGLGLRVVELTGETSTDL 218
CAEFA+LRNHQKG ++ +RVVYIAP+EA+AKE YRDWERKFGKGLG+RVVELTGE + DL
Sbjct: 1386 CAEFAILRNHQKGPDSTLRVVYIAPLEAIAKERYRDWERKFGKGLGMRVVELTGELAMDL 1445
Query: 217 KLLEKGQIVISTPEKWDSLSRRWKHRKHIQQVSLFVIDEXXXXXXXXXXXLEVIVSRMRY 38
KLLEKGQ++ISTPEKWD+LSRRWK RK +QQVSLF++DE LEVIVSRMRY
Sbjct: 1446 KLLEKGQVIISTPEKWDALSRRWKQRKFVQQVSLFIVDELHLIGGQGGPVLEVIVSRMRY 1505
Query: 37 IASQSENKIRIV 2
IASQ E KIRIV
Sbjct: 1506 IASQVEKKIRIV 1517
Score = 153 bits (387), Expect = 5e-34
Identities = 103/380 (27%), Positives = 187/380 (49%), Gaps = 7/380 (1%)
Frame = -1
Query: 1942 GVNLPAHTVIIKGTQIYNPEKGAWTELSPLDVMQMLGRAGRPQYDTYGEGIIITGHSELQ 1763
GV L AH V++ GTQ Y+ + A T+ D++QM+G A RP D G+ +I+ +
Sbjct: 1684 GVPLSAHLVVVMGTQYYDGRENAHTDYPVTDLLQMMGHASRPLLDNSGKCVILCHAPRKE 1743
Query: 1762 YYLSLMNAQLPIESQFVSKLADQLNAEIVLGTVQNAKEACNWLGYTYLYIRMLRNPTLYG 1583
YY + P+ES L D NAEIV ++N ++A ++L +T++Y R+ +NP Y
Sbjct: 1744 YYKKFLYEAFPVESHLHHFLHDNFNAEIVATVIENKQDAVDYLTWTFMYRRLTQNPNYYN 1803
Query: 1582 LAADVLSRDKLLEERRADLIHSAATVLEKNNLVKYDRKSGYFQVTDLGRIASYYYITHGT 1403
L + L + ++L+ + LE + + + +LG IASYYYI++ T
Sbjct: 1804 LQG---VSHRHLSDHLSELVENTLNDLEASKCITIEDDMD-LSPLNLGMIASYYYISYTT 1859
Query: 1402 ISTYNEHLKPTMGDIELCRLFSLSEEFKYVTVRQDEKMELAKLLDRVPIPV-KESLEEPS 1226
I ++ L L + + + E+ + +R E+ L +L++ +P
Sbjct: 1860 IERFSSSLTSKTKMKGLLEILASASEYANLPIRPGEEEVLRRLINHQRFSFDNPRCTDPH 1919
Query: 1225 AKINVLLQAYISQLKLEGLSLTSDMVFITQSAGRLMRALFEIVLKRGWAQVAEKALNLCK 1046
K N LLQA+ S+ + G +L+ D + A RL++A+ +++ GW +A A+ + +
Sbjct: 1920 VKANALLQAHFSRQHVGG-NLSLDQREVLLFATRLLQAMVDVISSNGWLSLALLAMEVSQ 1978
Query: 1045 MVGKQMWSVQMPLRQFHGIQKDLLTKLERK-----ELAWDRYYDLTSTEIGELIRQQKVG 881
MV + MW L Q K+L + + E +D ++ E EL++ +
Sbjct: 1979 MVTQGMWERDSMLLQLPYFTKELAKRCQENPGKNIETIFD-LVEMEDDERRELLQMSDLQ 2037
Query: 880 KM-LHKYIHQFPKLNLAAHV 824
+ + K+ ++FP ++L+ V
Sbjct: 2038 LLDIAKFCNRFPNIDLSYEV 2057
Score = 90.1 bits (222), Expect = 6e-15
Identities = 72/232 (31%), Positives = 118/232 (50%), Gaps = 19/232 (8%)
Frame = -1
Query: 640 NSQSVLPV-SFRH-------LILPEKYPPPTE----LLDLQPLPVTALRNPAYEALYQEF 497
N + LPV S+RH + +P P E L+ + +P A PA++ + Q
Sbjct: 453 NKKCDLPVGSYRHHSKGYEEVHVPALKAKPLESNERLVKISEMPDWA--QPAFKGMQQ-- 508
Query: 496 KHFNPVQTQVFTVLYNTDDNVLVAAPTGSGKTICAEFAVLRN-----HQKGSNNV--MRV 338
N VQ++V+ + DN+L+ APTG+GKT A +L+ GS N ++
Sbjct: 509 --LNRVQSKVYETALFSADNILLCAPTGAGKTNVAVLTILQQLALNMDADGSINHGNYKI 566
Query: 337 VYIAPMEALAKESYRDWERKFGKGLGLRVVELTGETSTDLKLLEKGQIVISTPEKWDSLS 158
VY+APM+AL E + + + G+ V EL+G+ + + +++ QI+++TPEKWD ++
Sbjct: 567 VYVAPMKALVAEVVGNLSHRL-EAYGVTVRELSGDQTLTRQQIDETQIIVTTPEKWDIIT 625
Query: 157 RRWKHRKHIQQVSLFVIDEXXXXXXXXXXXLEVIVSRMRYIASQSENKIRIV 2
R+ R + Q V L +IDE LE IV+R ++ IR+V
Sbjct: 626 RKSGDRTYTQLVKLIIIDEIHLLHDNRGPVLESIVARTVRQIETTKEHIRLV 677
>ref|XP_002266580.1| PREDICTED: U5 small nuclear ribonucleoprotein 200 kDa helicase [Vitis
vinifera] gi|731390985|ref|XP_010650581.1| PREDICTED: U5
small nuclear ribonucleoprotein 200 kDa helicase [Vitis
vinifera] gi|731390987|ref|XP_010650582.1| PREDICTED: U5
small nuclear ribonucleoprotein 200 kDa helicase [Vitis
vinifera]
Length = 2177
Score = 1129 bits (2920), Expect = 0.0
Identities = 560/672 (83%), Positives = 605/672 (90%), Gaps = 25/672 (3%)
Frame = -1
Query: 1942 GVNLPAHTVIIKGTQIYNPEKGAWTELSPLDVMQMLGRAGRPQYDTYGEGIIITGHSELQ 1763
GVNLPAHTVIIKGTQIYNPEKGAWTELSPLDVMQMLGRAGRPQYD+YGEGIIITGHSELQ
Sbjct: 849 GVNLPAHTVIIKGTQIYNPEKGAWTELSPLDVMQMLGRAGRPQYDSYGEGIIITGHSELQ 908
Query: 1762 YYLSLMNAQLPIESQFVSKLADQLNAEIVLGTVQNAKEACNWLGYTYLYIRMLRNPTLYG 1583
YYLSLMN QLPIESQFVSKLADQLNAEIVLGTVQNA+EAC+W+GYTYLY+RMLRNPTLYG
Sbjct: 909 YYLSLMNQQLPIESQFVSKLADQLNAEIVLGTVQNAREACSWIGYTYLYVRMLRNPTLYG 968
Query: 1582 LAADVLSRDKLLEERRADLIHSAATVLEKNNLVKYDRKSGYFQVTDLGRIASYYYITHGT 1403
L+ D L+RD LEERRADLIHSAA +L++NNLVKYDRKSGYFQVTDLGRIASYYYITHGT
Sbjct: 969 LSHDALTRDITLEERRADLIHSAAIILDRNNLVKYDRKSGYFQVTDLGRIASYYYITHGT 1028
Query: 1402 ISTYNEHLKPTMGDIELCRLFSLSEEFKYVTVRQDEKMELAKLLDRVPIPVKESLEEPSA 1223
ISTYNEHLKPTMGDIELCRLFSLSEEFKYVTVRQDEKMELAKLLDRVPIP+KESLEEPSA
Sbjct: 1029 ISTYNEHLKPTMGDIELCRLFSLSEEFKYVTVRQDEKMELAKLLDRVPIPIKESLEEPSA 1088
Query: 1222 KINVLLQAYISQLKLEGLSLTSDMVFITQSAGRLMRALFEIVLKRGWAQVAEKALNLCKM 1043
KINVLLQAYISQLKLEGLSLTSDMVFITQSAGRL+RALFEIVLKRGWAQ+ EKALNLCKM
Sbjct: 1089 KINVLLQAYISQLKLEGLSLTSDMVFITQSAGRLVRALFEIVLKRGWAQLTEKALNLCKM 1148
Query: 1042 VGKQMWSVQMPLRQFHGIQKDLLTKLERKELAWDRYYDLTSTEIGELIRQQKVGKMLHKY 863
V K+MWSVQ PLRQF+ I ++L KLE+K+LAW+RYYDL+S E+GELIR K+G+ LHK+
Sbjct: 1149 VNKRMWSVQTPLRQFNAIPNEILMKLEKKDLAWERYYDLSSQELGELIRYPKMGRTLHKF 1208
Query: 862 IHQFPKLNLAAHVQPITRTVLRVELTITPDFMWEDRVHG--------------------- 746
IHQFPKL+LAAHVQPITRTVLRVELTITPDF WED+VHG
Sbjct: 1209 IHQFPKLDLAAHVQPITRTVLRVELTITPDFQWEDKVHGFVEPFWVIVEDNDGEYILHHE 1268
Query: 745 ----XXXXXXEDHTLSFTVPIYEPLPPQYFIRVVSDKWLNSQSVLPVSFRHLILPEKYPP 578
E HTL+FTVPIYEPLPPQYFIRVVSD+WL SQSVLPVSFRHLILPEKYPP
Sbjct: 1269 YFMMKKQYIDEVHTLNFTVPIYEPLPPQYFIRVVSDRWLGSQSVLPVSFRHLILPEKYPP 1328
Query: 577 PTELLDLQPLPVTALRNPAYEALYQEFKHFNPVQTQVFTVLYNTDDNVLVAAPTGSGKTI 398
PTELLDLQPLPVTALRNP+YEALYQEFKHFNP+QTQVFTVLYNTDDNVLVAAPTGSGKTI
Sbjct: 1329 PTELLDLQPLPVTALRNPSYEALYQEFKHFNPIQTQVFTVLYNTDDNVLVAAPTGSGKTI 1388
Query: 397 CAEFAVLRNHQKGSNNVMRVVYIAPMEALAKESYRDWERKFGKGLGLRVVELTGETSTDL 218
CAEFA+LRNHQKGS +++R VYIAP+EALAKE YRDWERKFG+GLG+RVVELTGET+TDL
Sbjct: 1389 CAEFAILRNHQKGSESIVRAVYIAPIEALAKERYRDWERKFGRGLGMRVVELTGETATDL 1448
Query: 217 KLLEKGQIVISTPEKWDSLSRRWKHRKHIQQVSLFVIDEXXXXXXXXXXXLEVIVSRMRY 38
KLLE+GQ++ISTPEKWD+LSRRWK RKH+QQVSLF+IDE LEVIVSRMRY
Sbjct: 1449 KLLERGQVIISTPEKWDALSRRWKQRKHVQQVSLFIIDELHLIGGQGGPVLEVIVSRMRY 1508
Query: 37 IASQSENKIRIV 2
IASQ ENKIRIV
Sbjct: 1509 IASQGENKIRIV 1520
Score = 164 bits (416), Expect = 2e-37
Identities = 114/405 (28%), Positives = 200/405 (49%), Gaps = 6/405 (1%)
Frame = -1
Query: 1942 GVNLPAHTVIIKGTQIYNPEKGAWTELSPLDVMQMLGRAGRPQYDTYGEGIIITGHSELQ 1763
GV L AH V++ GTQ Y+ + A T+ D++QM+G A RP D G+ +I+ +
Sbjct: 1687 GVPLSAHLVVVMGTQYYDGRENAHTDYPVTDLLQMMGHASRPLLDNSGKCVILCHAPRKE 1746
Query: 1762 YYLSLMNAQLPIESQFVSKLADQLNAEIVLGTVQNAKEACNWLGYTYLYIRMLRNPTLYG 1583
YY + P+ES L D LNAEIV+G ++N ++A ++L +T++Y R+ +NP Y
Sbjct: 1747 YYKKFLYEAFPVESHLQHYLHDNLNAEIVVGVIENKQDAVDYLTWTFMYRRLTQNPNYYN 1806
Query: 1582 LAADVLSRDKLLEERRADLIHSAATVLEKNNLVKYDRKSGYFQVTDLGRIASYYYITHGT 1403
L + L + ++ + + + LE + V + +LG IASYYYI++ T
Sbjct: 1807 LQG---VSHRHLSDHLSESVENTLSDLEASKCVAIEDDMD-LSPLNLGMIASYYYISYTT 1862
Query: 1402 ISTYNEHLKPTMGDIELCRLFSLSEEFKYVTVRQDEKMELAKLLDRVPIPVKE-SLEEPS 1226
I ++ L L + + + E+ + +R E+ + +L++ + +P
Sbjct: 1863 IERFSSSLTSKTKMKGLLEILASASEYAQIPIRPGEEDLIRRLINHQRFSFENPKCTDPH 1922
Query: 1225 AKINVLLQAYISQLKLEGLSLTSDMVFITQSAGRLMRALFEIVLKRGWAQVAEKALNLCK 1046
K N LLQA+ S+ ++ G +L D + SAGRL++A+ +++ GW +A A+ + +
Sbjct: 1923 IKANALLQAHFSR-QIVGGNLALDQREVLLSAGRLLQAMVDVISSNGWLNLALLAMEVSQ 1981
Query: 1045 MVGKQMWSVQMPLRQFHGIQKDLLTKL-ERKELAWDRYYDLTSTEIGEL--IRQQKVGKM 875
MV + MW L Q KDL + E + + +DL E E + Q ++
Sbjct: 1982 MVTQGMWERDSMLLQLPHFTKDLAKRCQENPGKSIETVFDLVEMEDDERRELLQMSDSQL 2041
Query: 874 LH--KYIHQFPKLNLAAHVQPITRTVLRVELTITPDFMWEDRVHG 746
L ++ ++FP +++ V + LR IT M E + G
Sbjct: 2042 LDIARFCNRFPNIDITYEV--LDSENLRAGDDITLQVMLERDLEG 2084
Score = 93.6 bits (231), Expect = 6e-16
Identities = 65/200 (32%), Positives = 107/200 (53%), Gaps = 7/200 (3%)
Frame = -1
Query: 580 PPTELLDLQPLPVTALRNPAYEALYQEFKHFNPVQTQVFTVLYNTDDNVLVAAPTGSGKT 401
P EL+ + +P A PA++ + Q N VQ++V+ T +NVL+ APTG+GKT
Sbjct: 488 PGEELVKISAMPDWA--QPAFKGMTQ----LNRVQSKVYETALFTAENVLLCAPTGAGKT 541
Query: 400 ------ICAEFAVLRNHQKGSNNV-MRVVYIAPMEALAKESYRDWERKFGKGLGLRVVEL 242
I + A+ RN N+ ++VY+APM+AL E + + + ++V EL
Sbjct: 542 NVAMLTILQQIALNRNADGSFNHSNYKIVYVAPMKALVAEVVGNLSNRL-QHYDVKVKEL 600
Query: 241 TGETSTDLKLLEKGQIVISTPEKWDSLSRRWKHRKHIQQVSLFVIDEXXXXXXXXXXXLE 62
+G+ S + +E+ QI+++TPEKWD ++R+ R + Q V L ++DE LE
Sbjct: 601 SGDQSLTRQQIEETQIIVTTPEKWDIITRKSGDRTYTQLVKLLIVDEIHLLHDNRGPVLE 660
Query: 61 VIVSRMRYIASQSENKIRIV 2
IV+R ++ IR+V
Sbjct: 661 SIVARTVRQIETTKEHIRLV 680
>emb|CAN75158.1| hypothetical protein VITISV_042645 [Vitis vinifera]
Length = 2144
Score = 1129 bits (2920), Expect = 0.0
Identities = 560/672 (83%), Positives = 605/672 (90%), Gaps = 25/672 (3%)
Frame = -1
Query: 1942 GVNLPAHTVIIKGTQIYNPEKGAWTELSPLDVMQMLGRAGRPQYDTYGEGIIITGHSELQ 1763
GVNLPAHTVIIKGTQIYNPEKGAWTELSPLDVMQMLGRAGRPQYD+YGEGIIITGHSELQ
Sbjct: 816 GVNLPAHTVIIKGTQIYNPEKGAWTELSPLDVMQMLGRAGRPQYDSYGEGIIITGHSELQ 875
Query: 1762 YYLSLMNAQLPIESQFVSKLADQLNAEIVLGTVQNAKEACNWLGYTYLYIRMLRNPTLYG 1583
YYLSLMN QLPIESQFVSKLADQLNAEIVLGTVQNA+EAC+W+GYTYLY+RMLRNPTLYG
Sbjct: 876 YYLSLMNQQLPIESQFVSKLADQLNAEIVLGTVQNAREACSWIGYTYLYVRMLRNPTLYG 935
Query: 1582 LAADVLSRDKLLEERRADLIHSAATVLEKNNLVKYDRKSGYFQVTDLGRIASYYYITHGT 1403
L+ D L+RD LEERRADLIHSAA +L++NNLVKYDRKSGYFQVTDLGRIASYYYITHGT
Sbjct: 936 LSHDALTRDITLEERRADLIHSAAIILDRNNLVKYDRKSGYFQVTDLGRIASYYYITHGT 995
Query: 1402 ISTYNEHLKPTMGDIELCRLFSLSEEFKYVTVRQDEKMELAKLLDRVPIPVKESLEEPSA 1223
ISTYNEHLKPTMGDIELCRLFSLSEEFKYVTVRQDEKMELAKLLDRVPIP+KESLEEPSA
Sbjct: 996 ISTYNEHLKPTMGDIELCRLFSLSEEFKYVTVRQDEKMELAKLLDRVPIPIKESLEEPSA 1055
Query: 1222 KINVLLQAYISQLKLEGLSLTSDMVFITQSAGRLMRALFEIVLKRGWAQVAEKALNLCKM 1043
KINVLLQAYISQLKLEGLSLTSDMVFITQSAGRL+RALFEIVLKRGWAQ+ EKALNLCKM
Sbjct: 1056 KINVLLQAYISQLKLEGLSLTSDMVFITQSAGRLVRALFEIVLKRGWAQLTEKALNLCKM 1115
Query: 1042 VGKQMWSVQMPLRQFHGIQKDLLTKLERKELAWDRYYDLTSTEIGELIRQQKVGKMLHKY 863
V K+MWSVQ PLRQF+ I ++L KLE+K+LAW+RYYDL+S E+GELIR K+G+ LHK+
Sbjct: 1116 VNKRMWSVQTPLRQFNAIPNEILMKLEKKDLAWERYYDLSSQELGELIRYPKMGRTLHKF 1175
Query: 862 IHQFPKLNLAAHVQPITRTVLRVELTITPDFMWEDRVHG--------------------- 746
IHQFPKL+LAAHVQPITRTVLRVELTITPDF WED+VHG
Sbjct: 1176 IHQFPKLDLAAHVQPITRTVLRVELTITPDFQWEDKVHGFVEPFWVIVEDNDGEYILHHE 1235
Query: 745 ----XXXXXXEDHTLSFTVPIYEPLPPQYFIRVVSDKWLNSQSVLPVSFRHLILPEKYPP 578
E HTL+FTVPIYEPLPPQYFIRVVSD+WL SQSVLPVSFRHLILPEKYPP
Sbjct: 1236 YFMMKKQYIDEVHTLNFTVPIYEPLPPQYFIRVVSDRWLGSQSVLPVSFRHLILPEKYPP 1295
Query: 577 PTELLDLQPLPVTALRNPAYEALYQEFKHFNPVQTQVFTVLYNTDDNVLVAAPTGSGKTI 398
PTELLDLQPLPVTALRNP+YEALYQEFKHFNP+QTQVFTVLYNTDDNVLVAAPTGSGKTI
Sbjct: 1296 PTELLDLQPLPVTALRNPSYEALYQEFKHFNPIQTQVFTVLYNTDDNVLVAAPTGSGKTI 1355
Query: 397 CAEFAVLRNHQKGSNNVMRVVYIAPMEALAKESYRDWERKFGKGLGLRVVELTGETSTDL 218
CAEFA+LRNHQKGS +++R VYIAP+EALAKE YRDWERKFG+GLG+RVVELTGET+TDL
Sbjct: 1356 CAEFAILRNHQKGSESIVRAVYIAPIEALAKERYRDWERKFGRGLGMRVVELTGETATDL 1415
Query: 217 KLLEKGQIVISTPEKWDSLSRRWKHRKHIQQVSLFVIDEXXXXXXXXXXXLEVIVSRMRY 38
KLLE+GQ++ISTPEKWD+LSRRWK RKH+QQVSLF+IDE LEVIVSRMRY
Sbjct: 1416 KLLERGQVIISTPEKWDALSRRWKQRKHVQQVSLFIIDELHLIGGQGGPVLEVIVSRMRY 1475
Query: 37 IASQSENKIRIV 2
IASQ ENKIRIV
Sbjct: 1476 IASQGENKIRIV 1487
Score = 163 bits (413), Expect = 5e-37
Identities = 114/405 (28%), Positives = 199/405 (49%), Gaps = 6/405 (1%)
Frame = -1
Query: 1942 GVNLPAHTVIIKGTQIYNPEKGAWTELSPLDVMQMLGRAGRPQYDTYGEGIIITGHSELQ 1763
GV L AH V++ GTQ Y+ + A T+ D++QM+G A RP D G+ +I+ +
Sbjct: 1654 GVPLSAHLVVVMGTQYYDGRENAHTDYPVTDLLQMMGHASRPLLDNSGKCVILCHAPRKE 1713
Query: 1762 YYLSLMNAQLPIESQFVSKLADQLNAEIVLGTVQNAKEACNWLGYTYLYIRMLRNPTLYG 1583
YY + P+ES L D LNAEIV+G ++N ++A ++L +T++Y R+ +NP Y
Sbjct: 1714 YYKKFLYEAFPVESHLQHYLHDNLNAEIVVGVIENKQDAVDYLTWTFMYRRLTQNPNYYN 1773
Query: 1582 LAADVLSRDKLLEERRADLIHSAATVLEKNNLVKYDRKSGYFQVTDLGRIASYYYITHGT 1403
L + L + ++ + + + LE + V + +LG IASYYYI++ T
Sbjct: 1774 LQG---VSHRHLSDHLSESVENTLSDLEASKCVAIEDDMD-LSPLNLGMIASYYYISYTT 1829
Query: 1402 ISTYNEHLKPTMGDIELCRLFSLSEEFKYVTVRQDEKMELAKLLDRVPIPVKE-SLEEPS 1226
I ++ L L + + + E+ + +R E+ + +L++ + +P
Sbjct: 1830 IERFSSSLTSKTKMKGLLEILASASEYAQIPIRPGEEDLIRRLINHQRFSFENPKCTDPH 1889
Query: 1225 AKINVLLQAYISQLKLEGLSLTSDMVFITQSAGRLMRALFEIVLKRGWAQVAEKALNLCK 1046
K N LLQA+ S+ ++ G +L D + SAGRL++A+ +++ GW +A A+ + +
Sbjct: 1890 IKANALLQAHFSR-QIVGGNLALDQREVLLSAGRLLQAMVDVISSNGWLNLALLAMEVSQ 1948
Query: 1045 MVGKQMWSVQMPLRQFHGIQKDLLTKL-ERKELAWDRYYDLTSTEIGEL--IRQQKVGKM 875
MV + MW L Q KDL + E + + +DL E E + Q ++
Sbjct: 1949 MVTQGMWERDSMLLQLPHFTKDLAKRCQENPGKSIETVFDLVEMEDDERRELLQMSDSQL 2008
Query: 874 LH--KYIHQFPKLNLAAHVQPITRTVLRVELTITPDFMWEDRVHG 746
L ++ ++FP ++ V + LR IT M E + G
Sbjct: 2009 LDIARFCNRFPNIDXTYEV--LDSENLRAGDDITLQVMLERDLEG 2051
Score = 93.6 bits (231), Expect = 6e-16
Identities = 65/200 (32%), Positives = 107/200 (53%), Gaps = 7/200 (3%)
Frame = -1
Query: 580 PPTELLDLQPLPVTALRNPAYEALYQEFKHFNPVQTQVFTVLYNTDDNVLVAAPTGSGKT 401
P EL+ + +P A PA++ + Q N VQ++V+ T +NVL+ APTG+GKT
Sbjct: 455 PGEELVKISAMPDWA--QPAFKGMTQ----LNRVQSKVYETALFTAENVLLCAPTGAGKT 508
Query: 400 ------ICAEFAVLRNHQKGSNNV-MRVVYIAPMEALAKESYRDWERKFGKGLGLRVVEL 242
I + A+ RN N+ ++VY+APM+AL E + + + ++V EL
Sbjct: 509 NVAMLTILQQIALNRNADGSFNHSNYKIVYVAPMKALVAEVVGNLSNRL-QHYDVKVKEL 567
Query: 241 TGETSTDLKLLEKGQIVISTPEKWDSLSRRWKHRKHIQQVSLFVIDEXXXXXXXXXXXLE 62
+G+ S + +E+ QI+++TPEKWD ++R+ R + Q V L ++DE LE
Sbjct: 568 SGDQSLTRQQIEETQIIVTTPEKWDIITRKSGDRTYTQLVKLLIVDEIHLLHDNRGPVLE 627
Query: 61 VIVSRMRYIASQSENKIRIV 2
IV+R ++ IR+V
Sbjct: 628 SIVARTVRQIETTKEHIRLV 647
>ref|XP_003595992.2| U5 small nuclear ribonucleoprotein 200 kDa helicase [Medicago
truncatula] gi|657398835|gb|AES66243.2| U5 small nuclear
ribonucleoprotein 200 kDa helicase [Medicago truncatula]
Length = 2188
Score = 1129 bits (2919), Expect = 0.0
Identities = 562/672 (83%), Positives = 608/672 (90%), Gaps = 25/672 (3%)
Frame = -1
Query: 1942 GVNLPAHTVIIKGTQIYNPEKGAWTELSPLDVMQMLGRAGRPQYDTYGEGIIITGHSELQ 1763
GVNLPAHTVIIKGTQIYNPEKGAWTELSPLDVMQMLGRAGRPQYD+YGEGII+TGHSELQ
Sbjct: 862 GVNLPAHTVIIKGTQIYNPEKGAWTELSPLDVMQMLGRAGRPQYDSYGEGIILTGHSELQ 921
Query: 1762 YYLSLMNAQLPIESQFVSKLADQLNAEIVLGTVQNAKEACNWLGYTYLYIRMLRNPTLYG 1583
YYLSLMN QLPIESQF+SKLADQLNAEIVLGTVQNAKEAC+W+GYTYLY+RMLRNP+LYG
Sbjct: 922 YYLSLMNQQLPIESQFISKLADQLNAEIVLGTVQNAKEACHWIGYTYLYVRMLRNPSLYG 981
Query: 1582 LAADVLSRDKLLEERRADLIHSAATVLEKNNLVKYDRKSGYFQVTDLGRIASYYYITHGT 1403
LA DVLSRD LEERRADLIH+AAT+L++NNLVKYDRKSGYFQVTDLGRIASYYYITHGT
Sbjct: 982 LAPDVLSRDITLEERRADLIHTAATILDRNNLVKYDRKSGYFQVTDLGRIASYYYITHGT 1041
Query: 1402 ISTYNEHLKPTMGDIELCRLFSLSEEFKYVTVRQDEKMELAKLLDRVPIPVKESLEEPSA 1223
ISTYNEHLKPTMGDIELCRLFSLSEEFKYVTVRQDEKMELAKLLDRVPIP+KESLEEPSA
Sbjct: 1042 ISTYNEHLKPTMGDIELCRLFSLSEEFKYVTVRQDEKMELAKLLDRVPIPIKESLEEPSA 1101
Query: 1222 KINVLLQAYISQLKLEGLSLTSDMVFITQSAGRLMRALFEIVLKRGWAQVAEKALNLCKM 1043
KINVLLQAYISQLKLEGLS+TSDMVFITQSAGRL+RALFEIVLKRGWAQ+AEKALNLCKM
Sbjct: 1102 KINVLLQAYISQLKLEGLSMTSDMVFITQSAGRLLRALFEIVLKRGWAQLAEKALNLCKM 1161
Query: 1042 VGKQMWSVQMPLRQFHGIQKDLLTKLERKELAWDRYYDLTSTEIGELIRQQKVGKMLHKY 863
V K+MWSVQ PLRQF+GI D+LTKLE+K+LAW+RYYDL+S EIGELIR K+G+ LH++
Sbjct: 1162 VTKRMWSVQTPLRQFNGIPSDVLTKLEKKDLAWERYYDLSSQEIGELIRAPKMGRTLHRF 1221
Query: 862 IHQFPKLNLAAHVQPITRTVLRVELTITPDFMWEDRVHG--------------------- 746
IHQFPKLNLAAHVQPITRTVL VELTITPDF W+DR+HG
Sbjct: 1222 IHQFPKLNLAAHVQPITRTVLGVELTITPDFAWDDRMHGYVEPFWVIVEDNDGEYILHHE 1281
Query: 745 ----XXXXXXEDHTLSFTVPIYEPLPPQYFIRVVSDKWLNSQSVLPVSFRHLILPEKYPP 578
EDHTL+FTVPIYEPLPPQYFIRVVSDKWL SQ+VLPVSFRHLILPEKYPP
Sbjct: 1282 YFLLKKQYIEEDHTLNFTVPIYEPLPPQYFIRVVSDKWLGSQTVLPVSFRHLILPEKYPP 1341
Query: 577 PTELLDLQPLPVTALRNPAYEALYQEFKHFNPVQTQVFTVLYNTDDNVLVAAPTGSGKTI 398
PTELLDLQPLPVTALRNP+YEALYQ+FKHFNPVQTQVFTVLYN+DDNVLVAAPTGSGKTI
Sbjct: 1342 PTELLDLQPLPVTALRNPSYEALYQDFKHFNPVQTQVFTVLYNSDDNVLVAAPTGSGKTI 1401
Query: 397 CAEFAVLRNHQKGSNNVMRVVYIAPMEALAKESYRDWERKFGKGLGLRVVELTGETSTDL 218
CAEFA+LRNHQK ++VMRVVYIAP+EALAKE YRDWE+KFG GL L+VVELTGET+TDL
Sbjct: 1402 CAEFAILRNHQKLPDSVMRVVYIAPVEALAKERYRDWEKKFGGGLKLKVVELTGETATDL 1461
Query: 217 KLLEKGQIVISTPEKWDSLSRRWKHRKHIQQVSLFVIDEXXXXXXXXXXXLEVIVSRMRY 38
KLLEKGQ++ISTPEKWD+LSRRWK RKH+QQVSLF+IDE LEVIVSRMRY
Sbjct: 1462 KLLEKGQVIISTPEKWDALSRRWKQRKHVQQVSLFIIDELHLIGGQGGPVLEVIVSRMRY 1521
Query: 37 IASQSENKIRIV 2
I+SQ ENKIRIV
Sbjct: 1522 ISSQLENKIRIV 1533
Score = 165 bits (418), Expect = 1e-37
Identities = 107/381 (28%), Positives = 193/381 (50%), Gaps = 8/381 (2%)
Frame = -1
Query: 1942 GVNLPAHTVIIKGTQIYNPEKGAWTELSPLDVMQMLGRAGRPQYDTYGEGIIITGHSELQ 1763
GV L AH V++ GTQ Y+ + A T+ D++QM+G A RP D G+ +I+ +
Sbjct: 1699 GVTLSAHLVVVMGTQYYDGRENAQTDYPVTDLLQMMGHASRPLVDNSGKCVILCHAPRKE 1758
Query: 1762 YYLSLMNAQLPIESQFVSKLADQLNAEIVLGTVQNAKEACNWLGYTYLYIRMLRNPTLYG 1583
YY + P+ES L D LNAEIV G ++N ++A ++L +T++Y R+ +NP Y
Sbjct: 1759 YYKKFLYEAFPVESHLHHFLHDNLNAEIVAGIIENKQDAVDYLTWTFMYRRLTQNPNYYN 1818
Query: 1582 LAADVLSRDKLLEERRADLIHSAATVLEKNNLVKYDRKSGYFQVTDLGRIASYYYITHGT 1403
L + L + ++++ + + LE + V + +LG IASYYYI++ T
Sbjct: 1819 LQG---VSHRHLSDHLSEMVENTLSDLEASKCVSIEDDMD-LSPLNLGMIASYYYISYTT 1874
Query: 1402 ISTYNEHLKPTMGDIELCRLFSLSEEFKYVTVRQDEKMELAKLLDRVPIPVKE-SLEEPS 1226
I ++ L L + S + E+ ++ +R E+ + +L++ + + +P
Sbjct: 1875 IERFSSSLTSKTKMKGLLEVLSSASEYAHLPIRPGEEEVVRRLINHQRFSFENPKVTDPH 1934
Query: 1225 AKINVLLQAYISQLKLEGLSLTSDMVFITQSAGRLMRALFEIVLKRGWAQVAEKALNLCK 1046
K N LLQA+ S+ + G +L+ D + SA RL++A+ +++ GW +A A+ + +
Sbjct: 1935 VKANALLQAHFSRQSVGG-NLSLDQREVLLSANRLLQAMVDVISSNGWLSMALLAMEVSQ 1993
Query: 1045 MVGKQMWSVQMPLRQFHGIQKDLLTKL-ERKELAWDRYYDLTSTEIGELIRQQKVGKM-- 875
MV + MW L Q KDL K E + + +DL E E R++ +
Sbjct: 1994 MVTQGMWERDSMLLQLPHFTKDLAKKCQENPGRSIETVFDLLEMEDDE--RRELLNMTDS 2051
Query: 874 ----LHKYIHQFPKLNLAAHV 824
+ ++ ++FP ++L+ +
Sbjct: 2052 QLLDIARFCNRFPNIDLSYEI 2072
Score = 95.1 bits (235), Expect = 2e-16
Identities = 67/201 (33%), Positives = 107/201 (53%), Gaps = 8/201 (3%)
Frame = -1
Query: 580 PPTELLDLQPLPVTALRNPAYEALYQEFKHFNPVQTQVFTVLYNTDDNVLVAAPTGSGKT 401
P +LL + +P A PA++ + Q N VQ++V+ DN+L+ APTG+GKT
Sbjct: 500 PNEKLLKISAMPDWA--QPAFKGMTQ----LNRVQSKVYETALFKPDNLLLCAPTGAGKT 553
Query: 400 ICAEFAVL------RNHQKGS--NNVMRVVYIAPMEALAKESYRDWERKFGKGLGLRVVE 245
A +L RN GS ++ ++VY+APM+AL E + + + + V E
Sbjct: 554 NVAVLTILQQIARHRNTDDGSIDHSAYKIVYVAPMKALVAEVVGNLSNRL-QDYNVTVRE 612
Query: 244 LTGETSTDLKLLEKGQIVISTPEKWDSLSRRWKHRKHIQQVSLFVIDEXXXXXXXXXXXL 65
L+G+ S + +E+ QI+++TPEKWD ++R+ R + Q V L +IDE L
Sbjct: 613 LSGDQSLTRQQIEETQIIVTTPEKWDIITRKSGDRTYTQLVKLVIIDEIHLLHDNRGPVL 672
Query: 64 EVIVSRMRYIASQSENKIRIV 2
E IV+R S++ IR+V
Sbjct: 673 ESIVARTVRQIETSKDYIRLV 693
>gb|KHN26799.1| U5 small nuclear ribonucleoprotein 200 kDa helicase [Glycine soja]
Length = 2147
Score = 1128 bits (2918), Expect = 0.0
Identities = 561/672 (83%), Positives = 607/672 (90%), Gaps = 25/672 (3%)
Frame = -1
Query: 1942 GVNLPAHTVIIKGTQIYNPEKGAWTELSPLDVMQMLGRAGRPQYDTYGEGIIITGHSELQ 1763
GVNLPAHTVIIKGTQIYNPEKGAWTELSPLDVMQMLGRAGRPQYD+YGEGII+TGHSELQ
Sbjct: 818 GVNLPAHTVIIKGTQIYNPEKGAWTELSPLDVMQMLGRAGRPQYDSYGEGIIVTGHSELQ 877
Query: 1762 YYLSLMNAQLPIESQFVSKLADQLNAEIVLGTVQNAKEACNWLGYTYLYIRMLRNPTLYG 1583
YYLSLMN QLPIESQFVSKLADQLNAEIVLGTVQNA+EACNW+GYTYLY+RMLRNP+LYG
Sbjct: 878 YYLSLMNQQLPIESQFVSKLADQLNAEIVLGTVQNAREACNWIGYTYLYVRMLRNPSLYG 937
Query: 1582 LAADVLSRDKLLEERRADLIHSAATVLEKNNLVKYDRKSGYFQVTDLGRIASYYYITHGT 1403
+A DVL+RD LEERRADLIH+AAT+L++NNLVKYDRKSGYFQVTDLGRIASYYYITHG+
Sbjct: 938 IAPDVLTRDITLEERRADLIHTAATILDRNNLVKYDRKSGYFQVTDLGRIASYYYITHGS 997
Query: 1402 ISTYNEHLKPTMGDIELCRLFSLSEEFKYVTVRQDEKMELAKLLDRVPIPVKESLEEPSA 1223
ISTYNEHLKPTMGDIELCRLFSLSEEFKYVTVRQDEKMELAKLLDRVPIP+KESLEEPSA
Sbjct: 998 ISTYNEHLKPTMGDIELCRLFSLSEEFKYVTVRQDEKMELAKLLDRVPIPIKESLEEPSA 1057
Query: 1222 KINVLLQAYISQLKLEGLSLTSDMVFITQSAGRLMRALFEIVLKRGWAQVAEKALNLCKM 1043
KINVLLQAYISQLKLEGLSLTSDMVFITQSAGRL+RALFEIVLKRGWAQ+AEKALNLCKM
Sbjct: 1058 KINVLLQAYISQLKLEGLSLTSDMVFITQSAGRLLRALFEIVLKRGWAQLAEKALNLCKM 1117
Query: 1042 VGKQMWSVQMPLRQFHGIQKDLLTKLERKELAWDRYYDLTSTEIGELIRQQKVGKMLHKY 863
K+MWSVQ PLRQF+GI DLLTKLE+K+LAW+RYYDL+S EIGELIR K+G+ LHK+
Sbjct: 1118 GTKRMWSVQTPLRQFNGIPSDLLTKLEKKDLAWERYYDLSSQEIGELIRAPKMGRTLHKF 1177
Query: 862 IHQFPKLNLAAHVQPITRTVLRVELTITPDFMWEDRVHG--------------------- 746
IHQFPKLNLAAHVQPITRTVLRVELTITPDF W+DR+HG
Sbjct: 1178 IHQFPKLNLAAHVQPITRTVLRVELTITPDFAWDDRIHGYVEPFWVIVEDNDGEYILHHE 1237
Query: 745 ----XXXXXXEDHTLSFTVPIYEPLPPQYFIRVVSDKWLNSQSVLPVSFRHLILPEKYPP 578
EDHTL+FTVPIYEPLPPQYFIRVVSD+WL SQ+VLPVSFRHLILPEKYPP
Sbjct: 1238 YFMLKKQYIDEDHTLNFTVPIYEPLPPQYFIRVVSDRWLGSQTVLPVSFRHLILPEKYPP 1297
Query: 577 PTELLDLQPLPVTALRNPAYEALYQEFKHFNPVQTQVFTVLYNTDDNVLVAAPTGSGKTI 398
PTELLDLQPLPVTALRN +YE+LY++FKHFNPVQTQVFTVLYN+DDNVLVAAPTGSGKTI
Sbjct: 1298 PTELLDLQPLPVTALRNSSYESLYKDFKHFNPVQTQVFTVLYNSDDNVLVAAPTGSGKTI 1357
Query: 397 CAEFAVLRNHQKGSNNVMRVVYIAPMEALAKESYRDWERKFGKGLGLRVVELTGETSTDL 218
CAEFA+LRNHQKG ++VMRVVY+AP+EALAKE YRDWERKFG GL LRVVELTGET+TDL
Sbjct: 1358 CAEFAILRNHQKGPDSVMRVVYVAPVEALAKERYRDWERKFGGGLKLRVVELTGETATDL 1417
Query: 217 KLLEKGQIVISTPEKWDSLSRRWKHRKHIQQVSLFVIDEXXXXXXXXXXXLEVIVSRMRY 38
KLLEKGQI+ISTPEKWD+LSRRWK RKH+QQVSLF+IDE LEV+VSRMRY
Sbjct: 1418 KLLEKGQIIISTPEKWDALSRRWKQRKHVQQVSLFIIDELHLIGGQGGPILEVVVSRMRY 1477
Query: 37 IASQSENKIRIV 2
IASQ ENK RIV
Sbjct: 1478 IASQVENKSRIV 1489
Score = 165 bits (418), Expect = 1e-37
Identities = 114/403 (28%), Positives = 200/403 (49%), Gaps = 12/403 (2%)
Frame = -1
Query: 1942 GVNLPAHTVIIKGTQIYNPEKGAWTELSPLDVMQMLGRAGRPQYDTYGEGIIITGHSELQ 1763
GV L AH V++ GTQ Y+ + A T+ D++QM+G A RP D G+ +I+ +
Sbjct: 1655 GVTLLAHLVVVMGTQYYDGRENAQTDYPVTDLLQMMGHASRPLVDNSGKCVILCHAPRKE 1714
Query: 1762 YYLSLMNAQLPIESQFVSKLADQLNAEIVLGTVQNAKEACNWLGYTYLYIRMLRNPTLYG 1583
YY + P+ES L D LNAEIV G ++N ++A ++L +T++Y R+ +NP Y
Sbjct: 1715 YYKKFLYEAFPVESHLHHFLHDNLNAEIVAGIIENKQDAVDYLTWTFMYRRLTQNPNYYN 1774
Query: 1582 LAADVLSRDKLLEERRADLIHSAATVLEKNNLVKYDRKSGYFQVTDLGRIASYYYITHGT 1403
L + L + ++++ + + LE + + + +LG IASYYYI++ T
Sbjct: 1775 LQG---VSHRHLSDHLSEMVENTLSDLEAGKCITIEDDMELAPL-NLGMIASYYYISYTT 1830
Query: 1402 ISTYNEHLKPTMGDIELCRLFSLSEEFKYVTVRQDEKMELAKLLDRVPIPVKE-SLEEPS 1226
I ++ + L + S + E+ + +R E+ + KL++ + + +P
Sbjct: 1831 IERFSSSVTSKTKMKGLLEILSSASEYAQLPIRPGEEEVVRKLINHQRFSFENPKVTDPH 1890
Query: 1225 AKINVLLQAYISQLKLEGLSLTSDMVFITQSAGRLMRALFEIVLKRGWAQVAEKALNLCK 1046
K N LLQA+ S+ + G +L D + SA RL++A+ +++ GW +A A+ + +
Sbjct: 1891 VKANALLQAHFSR-QFVGGNLALDQKEVLLSANRLLQAMVDVISSNGWLSLALLAMEVSQ 1949
Query: 1045 MVGKQMWSVQMPLRQFHGIQKDLLTKL-ERKELAWDRYYDLTSTEIGELIRQQKVGKM-- 875
MV + MW L Q KDL K E + + +DL E E RQ+ +G
Sbjct: 1950 MVTQGMWERDSMLLQLPHFTKDLAKKCQENPGKSIETVFDLLEMEDEE--RQKLLGMSDL 2007
Query: 874 ----LHKYIHQFPKLNLAAHVQPITRT----VLRVELTITPDF 770
+ ++ ++FP ++L+ V V+ V +T+ DF
Sbjct: 2008 QLLDIARFCNRFPNIDLSYEVLDSDNVRAGEVVTVLVTLERDF 2050
Score = 94.4 bits (233), Expect = 3e-16
Identities = 65/201 (32%), Positives = 109/201 (54%), Gaps = 8/201 (3%)
Frame = -1
Query: 580 PPTELLDLQPLPVTALRNPAYEALYQEFKHFNPVQTQVFTVLYNTDDNVLVAAPTGSGKT 401
P +L+ + +P A PA++ + Q N VQ++V+ DN+L+ APTG+GKT
Sbjct: 456 PNEKLVKISSMPDWA--QPAFKGMTQ----LNRVQSKVYETALFKPDNLLLCAPTGAGKT 509
Query: 400 ICAEFAVL------RNHQKGS--NNVMRVVYIAPMEALAKESYRDWERKFGKGLGLRVVE 245
A +L RN + GS ++ ++VY+APM+AL E + + + ++V E
Sbjct: 510 NVAVLTILQQIARHRNPEDGSIDHSAYKIVYVAPMKALVAEVVGNLSNRLQE-YDVKVRE 568
Query: 244 LTGETSTDLKLLEKGQIVISTPEKWDSLSRRWKHRKHIQQVSLFVIDEXXXXXXXXXXXL 65
L+G+ S + +E+ QI+++TPEKWD ++R+ R + Q V L +IDE L
Sbjct: 569 LSGDQSLTRQQIEETQIIVTTPEKWDIITRKSGDRTYTQLVKLLIIDEIHLLHDNRGPVL 628
Query: 64 EVIVSRMRYIASQSENKIRIV 2
E IV+R +++ IR+V
Sbjct: 629 ESIVARTVRQIETTKDYIRLV 649
>ref|XP_010270595.1| PREDICTED: U5 small nuclear ribonucleoprotein 200 kDa helicase-like
[Nelumbo nucifera] gi|720046748|ref|XP_010270596.1|
PREDICTED: U5 small nuclear ribonucleoprotein 200 kDa
helicase-like [Nelumbo nucifera]
Length = 2177
Score = 1128 bits (2918), Expect = 0.0
Identities = 561/672 (83%), Positives = 602/672 (89%), Gaps = 25/672 (3%)
Frame = -1
Query: 1942 GVNLPAHTVIIKGTQIYNPEKGAWTELSPLDVMQMLGRAGRPQYDTYGEGIIITGHSELQ 1763
GVNLPAHTVIIKGTQIYNPEKG WTELSPLDVMQMLGRAGRPQYD+YGEGII+TGHSELQ
Sbjct: 849 GVNLPAHTVIIKGTQIYNPEKGVWTELSPLDVMQMLGRAGRPQYDSYGEGIILTGHSELQ 908
Query: 1762 YYLSLMNAQLPIESQFVSKLADQLNAEIVLGTVQNAKEACNWLGYTYLYIRMLRNPTLYG 1583
YYLSLMN QLPIESQF+SKLADQLNAEIVLGTVQNAKEAC W+GYTYLY+RM+RNPTLYG
Sbjct: 909 YYLSLMNQQLPIESQFISKLADQLNAEIVLGTVQNAKEACYWIGYTYLYVRMVRNPTLYG 968
Query: 1582 LAADVLSRDKLLEERRADLIHSAATVLEKNNLVKYDRKSGYFQVTDLGRIASYYYITHGT 1403
LA DVL+RD LEERRADLIHSAAT+L++NNL+KYDRKSGYFQVTDLGRIASYYYITHGT
Sbjct: 969 LAPDVLTRDITLEERRADLIHSAATILDRNNLIKYDRKSGYFQVTDLGRIASYYYITHGT 1028
Query: 1402 ISTYNEHLKPTMGDIELCRLFSLSEEFKYVTVRQDEKMELAKLLDRVPIPVKESLEEPSA 1223
ISTYNEHLKPTMGDIELCRLFSLSEEFKYVTVRQDEKMELAKLLDRVPIP+KESLEEPSA
Sbjct: 1029 ISTYNEHLKPTMGDIELCRLFSLSEEFKYVTVRQDEKMELAKLLDRVPIPIKESLEEPSA 1088
Query: 1222 KINVLLQAYISQLKLEGLSLTSDMVFITQSAGRLMRALFEIVLKRGWAQVAEKALNLCKM 1043
KINVLLQAYISQLKLEGLSLTSDMVFITQSAGRL+RALFEIV+KRGWAQ+AEKALNLCKM
Sbjct: 1089 KINVLLQAYISQLKLEGLSLTSDMVFITQSAGRLLRALFEIVVKRGWAQLAEKALNLCKM 1148
Query: 1042 VGKQMWSVQMPLRQFHGIQKDLLTKLERKELAWDRYYDLTSTEIGELIRQQKVGKMLHKY 863
V K+MWSVQ PLRQF+GI ++L KLE+K+LAW+RYYDL+S EIGELIR K+G+ LHK+
Sbjct: 1149 VNKRMWSVQTPLRQFNGIPNEILMKLEKKDLAWERYYDLSSQEIGELIRFPKMGRTLHKF 1208
Query: 862 IHQFPKLNLAAHVQPITRTVLRVELTITPDFMWEDRVHG--------------------- 746
IHQFPKLNLAAHVQPITRTVLRVEL ITPDF WED+VHG
Sbjct: 1209 IHQFPKLNLAAHVQPITRTVLRVELMITPDFQWEDKVHGYVEPFWVIVEDNDGEYILHHE 1268
Query: 745 ----XXXXXXEDHTLSFTVPIYEPLPPQYFIRVVSDKWLNSQSVLPVSFRHLILPEKYPP 578
EDHTL+F VPIYEPLPPQYFIRVVSD+WL SQ+VLPVSFRHLILPEKYPP
Sbjct: 1269 YFMLKKQYIDEDHTLNFIVPIYEPLPPQYFIRVVSDRWLGSQTVLPVSFRHLILPEKYPP 1328
Query: 577 PTELLDLQPLPVTALRNPAYEALYQEFKHFNPVQTQVFTVLYNTDDNVLVAAPTGSGKTI 398
PTELLDLQPLPVTALRNP+YEALYQEFKHFNP+QTQVFTVLYNTDDNVLVAAPTGSGKTI
Sbjct: 1329 PTELLDLQPLPVTALRNPSYEALYQEFKHFNPIQTQVFTVLYNTDDNVLVAAPTGSGKTI 1388
Query: 397 CAEFAVLRNHQKGSNNVMRVVYIAPMEALAKESYRDWERKFGKGLGLRVVELTGETSTDL 218
CAEFA+LRNHQKG + MR VYIAP+EALAKE RDWERKFGKGLG+RVVEL GET+TDL
Sbjct: 1389 CAEFAILRNHQKGPESTMRAVYIAPIEALAKERCRDWERKFGKGLGMRVVELIGETATDL 1448
Query: 217 KLLEKGQIVISTPEKWDSLSRRWKHRKHIQQVSLFVIDEXXXXXXXXXXXLEVIVSRMRY 38
KLLEKGQI+ISTPEKWD+LSRRWK RKH+QQVSLF+IDE LEVIVSRMRY
Sbjct: 1449 KLLEKGQIIISTPEKWDALSRRWKQRKHVQQVSLFIIDELHLIGGLGGPVLEVIVSRMRY 1508
Query: 37 IASQSENKIRIV 2
IASQ ENKIRIV
Sbjct: 1509 IASQGENKIRIV 1520
Score = 167 bits (422), Expect = 4e-38
Identities = 108/379 (28%), Positives = 192/379 (50%), Gaps = 6/379 (1%)
Frame = -1
Query: 1942 GVNLPAHTVIIKGTQIYNPEKGAWTELSPLDVMQMLGRAGRPQYDTYGEGIIITGHSELQ 1763
G+ L AH V++ GTQ Y+ + A T+ D++QM+G A RP D G+ +I+ +
Sbjct: 1687 GMPLSAHLVVVMGTQYYDGRENAHTDYPVTDLLQMMGHASRPLLDNSGKCVILCHAPRKE 1746
Query: 1762 YYLSLMNAQLPIESQFVSKLADQLNAEIVLGTVQNAKEACNWLGYTYLYIRMLRNPTLYG 1583
YY + P+ES L D LNAEIV+G ++N ++A ++L +T++Y R+ +NP Y
Sbjct: 1747 YYKKFLYEAFPVESHLQHYLHDNLNAEIVVGVIENKQDAVDYLTWTFMYRRLTQNPNYYN 1806
Query: 1582 LAADVLSRDKLLEERRADLIHSAATVLEKNNLVKYDRKSGYFQVTDLGRIASYYYITHGT 1403
L + L + ++L+ + T LE + V + + +LG IASYYYI++ T
Sbjct: 1807 LQG---VSHRHLSDHLSELVENTLTDLEASKCVTIEDEMD-LSPLNLGMIASYYYISYTT 1862
Query: 1402 ISTYNEHLKPTMGDIELCRLFSLSEEFKYVTVRQDEKMELAKLLDRVPIPVKE-SLEEPS 1226
I ++ L L + + + E+ + +R E+ + +L++ + +P
Sbjct: 1863 IERFSSSLTSKTKMKGLLDILASASEYAQLPIRPGEEESIRRLINHQRFSFENPKCTDPH 1922
Query: 1225 AKINVLLQAYISQLKLEGLSLTSDMVFITQSAGRLMRALFEIVLKRGWAQVAEKALNLCK 1046
K N LLQA+ S+ + G +L SD + SA RL++A+ +++ GW +A A+ + +
Sbjct: 1923 VKANALLQAHFSRHTVVG-NLASDQREVLLSASRLLQAMVDVISSNGWLSLALLAMEVSQ 1981
Query: 1045 MVGKQMWSVQMPLRQFHGIQKDLLTKL-ERKELAWDRYYDLTSTEIGEL--IRQQKVGKM 875
MV + MW L Q K+L K E + + +DL E E + Q ++
Sbjct: 1982 MVTQGMWERDSMLLQLPHFTKELAKKCQENPGKSIETVFDLVEMEDDERRELLQMSDSQL 2041
Query: 874 LH--KYIHQFPKLNLAAHV 824
L ++ ++FP +++ V
Sbjct: 2042 LDIARFCNRFPNIDMTYEV 2060
Score = 94.4 bits (233), Expect = 3e-16
Identities = 65/205 (31%), Positives = 109/205 (53%), Gaps = 7/205 (3%)
Frame = -1
Query: 595 PEKYPPPTELLDLQPLPVTALRNPAYEALYQEFKHFNPVQTQVFTVLYNTDDNVLVAAPT 416
P+ P EL+ + +P A PA++ + Q N VQ++V+ T +N+L+ APT
Sbjct: 483 PKPLAPGEELIKISVMPDWA--QPAFKGMTQ----LNRVQSKVYETALFTAENILLCAPT 536
Query: 415 GSGKT------ICAEFAVLRNHQKGSNNV-MRVVYIAPMEALAKESYRDWERKFGKGLGL 257
G+GKT I + A+ RN N+ ++VY+APM+AL E + + + +
Sbjct: 537 GAGKTNVAMLTILQQIALHRNPDGSFNHSNYKIVYVAPMKALVAEVVGNLQNRLHH-YDV 595
Query: 256 RVVELTGETSTDLKLLEKGQIVISTPEKWDSLSRRWKHRKHIQQVSLFVIDEXXXXXXXX 77
+V EL+G+ + + +E+ QI+++TPEKWD ++R+ R + Q V L +IDE
Sbjct: 596 KVKELSGDQTLTRQQIEETQIIVTTPEKWDIITRKSGDRTYTQLVKLLIIDEIHLLHDNR 655
Query: 76 XXXLEVIVSRMRYIASQSENKIRIV 2
LE IV+R ++ IR+V
Sbjct: 656 GPVLESIVARTVRQIETTKEHIRLV 680