BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver29_contig00025970
         (1157 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABH07409.1| putative pol polyprotein [Brassica oleracea var. ...   544   e-152
gb|AAC95173.1| putative retroelement pol polyprotein [Arabidopsi...   427   e-117
gb|AAF97299.1|AC007843_2 Similar to copia-type reverse transcrip...   405   e-110
gb|AAF79483.1|AC022492_27 F1L3.20 [Arabidopsis thaliana]              390   e-105
gb|EEC84282.1| hypothetical protein OsI_30754 [Oryza sativa Indi...   385   e-104
ref|NP_001060895.1| Os08g0125300 [Oryza sativa Japonica Group] g...   385   e-104
gb|AAO72413.1| gag-pol polyprotein [Oryza sativa Japonica Group]...   384   e-104
emb|CAE04422.2| OSJNBb0040D15.12 [Oryza sativa Japonica Group]        374   e-100
gb|AAF63110.1|AC006423_11 putative retroelement pol polyprotein ...   370   1e-99
gb|ABB47537.2| retrotransposon protein, putative, unclassified [...   368   5e-99
gb|AAD32898.1| putative retroelement pol polyprotein [Arabidopsi...   360   1e-96
emb|CAD41731.1| OSJNBb0034I13.10 [Oryza sativa Japonica Group]        355   4e-95
ref|NP_001064098.1| Os10g0130700 [Oryza sativa Japonica Group] g...   353   1e-94
dbj|BAG94704.1| unnamed protein product [Oryza sativa Japonica G...   353   2e-94
ref|NP_001059837.1| Os07g0528100, partial [Oryza sativa Japonica...   353   2e-94
gb|AAZ66952.1| 117M18_33 [Brassica rapa]                              352   3e-94
gb|ACN78973.1| copia-type polyprotein [Glycine max] gi|225016157...   352   3e-94
emb|CAH66352.1| OSIGBa0135C09.3 [Oryza sativa Indica Group]           352   3e-94
gb|AAU90089.1| putative polyprotein [Oryza sativa Japonica Group]     352   3e-94
emb|CAE03692.2| OSJNBb0026E15.10 [Oryza sativa Japonica Group]        351   7e-94

>gb|ABH07409.1| putative pol polyprotein [Brassica oleracea var. botrytis]
          Length = 1239

 Score =  544 bits (1402), Expect = e-152
 Identities = 251/363 (69%), Positives = 306/363 (84%)
 Frame = -2

Query: 1156 PSGRLLVRVSRSQNRLYKISLMIGRPLCLNMRLEDQTWKWHARLGHISFRTIKTISQNKM 977
            PSGRLLV+V RS NRLYK+SL +G+P CL  ++ ++ W+WHARLGHI+F+TIK +++ +M
Sbjct: 295  PSGRLLVKVLRSPNRLYKVSLKVGKPSCLLTKINEEPWRWHARLGHINFKTIKDMAKLEM 354

Query: 976  VRGLPQINDEAKICESCLVRKQTRQGFPKATTFRASKPLELLHADLCGPITPQTLANNKY 797
            VRGLP+IN+E K+CESCLV KQTR  FP AT  R+S+ LELLHADLCGPI+P TLA N+Y
Sbjct: 355  VRGLPEINEEKKLCESCLVGKQTRNSFPSATPHRSSQVLELLHADLCGPISPSTLAQNRY 414

Query: 796  IFVIIDDFSRYMWSILMKEKSEAFDRFKAFRNLIEKELKEEVKMLRTDRGGEFTSLEFNK 617
            IFVIIDD +RYMWSIL+KEKSE F++FK F+ L+EKE+ + +  LRTDRGGEFTS +F  
Sbjct: 415  IFVIIDDNTRYMWSILLKEKSEVFEKFKTFKALVEKEVNKVIVTLRTDRGGEFTSRDFQD 474

Query: 616  FCESNGIKRQLTTPYTPQQNGVVERRNRTLMEMTRSSLKAMQVPNYLWGEAVRHSTYLIN 437
            +C +NGI+R LT PYTPQQNGVVERRNRTLMEMTRS LKAM VPNY+WGEAVRH+TYLIN
Sbjct: 475  YCNNNGIRRHLTAPYTPQQNGVVERRNRTLMEMTRSMLKAMNVPNYMWGEAVRHATYLIN 534

Query: 436  RIPTKALKDMTPYESLRKRKPNIDHLRVFGCKAYAKVDSATLKKLDDRSQTLVNLGIEPG 257
            R+PT+ALK+ TPYES + RKP+I H+RVFGC AYAK+D+A LKKLDDRSQTLV+LGIEPG
Sbjct: 535  RVPTRALKNQTPYESFKGRKPSIGHIRVFGCLAYAKLDAALLKKLDDRSQTLVHLGIEPG 594

Query: 256  SKAYRLFNPTTKRVIVSRDVVFDEKANWNWKETNDGPSRDPGMFHMRWGQVIDEGEGPII 77
            SKAYRL+NP+T+R++VSRDV FDEKA WNW ET+ G   + G FHM WG  IDEG GP +
Sbjct: 595  SKAYRLYNPSTRRIVVSRDVKFDEKACWNWNETDKGNQEESGKFHMTWGSSIDEGNGPFV 654

Query: 76   INT 68
            I +
Sbjct: 655  IGS 657


>gb|AAC95173.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
          Length = 1200

 Score =  427 bits (1099), Expect = e-117
 Identities = 204/343 (59%), Positives = 258/343 (75%), Gaps = 1/343 (0%)
 Frame = -2

Query: 1150 GRLLVRVSRSQNRLYKISLMIGRPLCLNMRLEDQTWKWHARLGHISFRTIKTISQNKMVR 971
            G LLV+ +RS+NRLY++ L +    CL +   +   KWHARLGHI+  TIK +   + V 
Sbjct: 353  GNLLVKATRSRNRLYRVELKVKNTKCLQLAALNDLTKWHARLGHINLETIKAMVTKEFVI 412

Query: 970  GLPQINDEAKICESCLVRKQTRQGFPKATTFRASKPLELLHADLCGPITPQTLANNKYIF 791
            G+P    E +IC SC++ KQ RQ FPKATT+RAS+ LEL+H DLCGPI+P T A  +YI 
Sbjct: 413  GIPSAPKEKEICASCMLGKQARQVFPKATTYRASQILELIHGDLCGPISPPTAAKRRYIL 472

Query: 790  VIIDDFSRYMWSILMKEKSEAFDRFKAFRNLIEKELKEEVKMLRTDRGGEFTSLEFNKFC 611
            V+IDD SR+MWS L+KEKSEAF +FK F+  +E+E  E++K LRTDRGGEF S EF  FC
Sbjct: 473  VLIDDHSRFMWSFLLKEKSEAFGKFKTFKATVEQETGEKIKTLRTDRGGEFLSQEFQTFC 532

Query: 610  ESNGIKRQLTTPYTPQQNGVVERRNRTLMEMTRSSLKAMQVPNYLWGEAVRHSTYLINRI 431
            E  GI R LT PYTPQQNGVVERRNRTL+ MTRS +K M VPNYLWGEA+RH+TYLINR+
Sbjct: 533  EEEGIIRHLTAPYTPQQNGVVERRNRTLLGMTRSIMKHMSVPNYLWGEAIRHATYLINRV 592

Query: 430  PTKALKDMTPYESLRKRKPNIDHLRVFGCKAYAKVDSATLKKLDDRSQTLVNLGIEPGSK 251
             T+AL + TPYE+L+K+KPN++HLRVFGC +YAKV+   L+KLD+RS+ LV LG E GSK
Sbjct: 593  GTRALINQTPYEALKKKKPNVEHLRVFGCVSYAKVEFPHLRKLDERSRILVYLGTETGSK 652

Query: 250  AYRLFNPTTKRVIVSRDVVFDEKANWNWKETN-DGPSRDPGMF 125
            AY L +PTT+++IVSRDVVFDE  +W W  +      ++PGMF
Sbjct: 653  AYTLLDPTTRKIIVSRDVVFDENKSWKWANSELIEIQKEPGMF 695


>gb|AAF97299.1|AC007843_2 Similar to copia-type reverse transcriptase proteins [Arabidopsis
            thaliana]
          Length = 833

 Score =  405 bits (1040), Expect = e-110
 Identities = 187/297 (62%), Positives = 234/297 (78%)
 Frame = -2

Query: 1027 LGHISFRTIKTISQNKMVRGLPQINDEAKICESCLVRKQTRQGFPKATTFRASKPLELLH 848
            +GH +F T+K++   ++V+G+P I  E +IC SCL+ KQTR+ FP   TFRASK LEL+H
Sbjct: 1    MGHTNFATLKSMIDKELVQGVPDIKVEKEICSSCLLGKQTRKMFPLEATFRASKKLELIH 60

Query: 847  ADLCGPITPQTLANNKYIFVIIDDFSRYMWSILMKEKSEAFDRFKAFRNLIEKELKEEVK 668
             DLC PITP T A NKYIF +IDDF RYMW+IL+KEK++AF +F  F++L+EKE    V+
Sbjct: 61   GDLCVPITPSTKAGNKYIFALIDDFFRYMWTILLKEKADAFQKFCNFKSLVEKESSTRVQ 120

Query: 667  MLRTDRGGEFTSLEFNKFCESNGIKRQLTTPYTPQQNGVVERRNRTLMEMTRSSLKAMQV 488
              RTDRGGEF S EFN FCE +GI R LT PYTPQQNGVVERRNRT+MEMTRS LK M +
Sbjct: 121  TFRTDRGGEFVSHEFNSFCEKSGITRHLTAPYTPQQNGVVERRNRTMMEMTRSILKHMHL 180

Query: 487  PNYLWGEAVRHSTYLINRIPTKALKDMTPYESLRKRKPNIDHLRVFGCKAYAKVDSATLK 308
            PNYLWGEA+RH+TYL+NRI T++LKD TPYE  R R+P ++H+R+FGC AYAK+D   L+
Sbjct: 181  PNYLWGEAIRHTTYLLNRIITRSLKDKTPYECFRDRRPTVEHIRIFGCIAYAKIDKQQLR 240

Query: 307  KLDDRSQTLVNLGIEPGSKAYRLFNPTTKRVIVSRDVVFDEKANWNWKETNDGPSRD 137
            KLDDRS+ L++LG EPGSKAYRLF+P T++V+VSRDVVFDE   W+WK +N G   D
Sbjct: 241  KLDDRSRILIHLGTEPGSKAYRLFDPQTQKVVVSRDVVFDEGKGWDWKYSNTGKDGD 297


>gb|AAF79483.1|AC022492_27 F1L3.20 [Arabidopsis thaliana]
          Length = 1188

 Score =  390 bits (1001), Expect = e-105
 Identities = 194/338 (57%), Positives = 236/338 (69%)
 Frame = -2

Query: 1150 GRLLVRVSRSQNRLYKISLMIGRPLCLNMRLEDQTWKWHARLGHISFRTIKTISQNKMVR 971
            G+LLV+  RS+NRLYKI           M L D+                          
Sbjct: 379  GKLLVKAKRSKNRLYKI----------RMGLRDEA------------------------- 403

Query: 970  GLPQINDEAKICESCLVRKQTRQGFPKATTFRASKPLELLHADLCGPITPQTLANNKYIF 791
                I  E +IC SCL+ KQTR+ FP   TFRASK LEL+H DLC PITP T A NKYIF
Sbjct: 404  --VYIKVEKEICSSCLLGKQTRKMFPLEATFRASKKLELIHGDLCVPITPSTKAGNKYIF 461

Query: 790  VIIDDFSRYMWSILMKEKSEAFDRFKAFRNLIEKELKEEVKMLRTDRGGEFTSLEFNKFC 611
             +IDDF RYMW+IL+KEK++AF +F  F++L+EKE    V+  RTDRGGEF S EFN FC
Sbjct: 462  ALIDDFFRYMWTILLKEKADAFQKFCNFKSLVEKESSTRVQTFRTDRGGEFVSHEFNSFC 521

Query: 610  ESNGIKRQLTTPYTPQQNGVVERRNRTLMEMTRSSLKAMQVPNYLWGEAVRHSTYLINRI 431
            E +GI R LT PYTPQQNGVVERRNRT+MEMTRS LK M +PNYLWGEA+RH+TYL+NRI
Sbjct: 522  EKSGITRHLTAPYTPQQNGVVERRNRTMMEMTRSILKHMHLPNYLWGEAIRHTTYLLNRI 581

Query: 430  PTKALKDMTPYESLRKRKPNIDHLRVFGCKAYAKVDSATLKKLDDRSQTLVNLGIEPGSK 251
             T++LKD TPYE  R R+P ++H+R+FGC AYAK+D   L+KLDDRS+ L++LG EPGSK
Sbjct: 582  ITRSLKDKTPYECFRDRRPTVEHIRIFGCIAYAKIDKQQLRKLDDRSRILIHLGTEPGSK 641

Query: 250  AYRLFNPTTKRVIVSRDVVFDEKANWNWKETNDGPSRD 137
            AYRLF+P T++V+VSRDVVFDE   W+WK +N G   D
Sbjct: 642  AYRLFDPQTQKVVVSRDVVFDEGKGWDWKYSNTGKDGD 679


>gb|EEC84282.1| hypothetical protein OsI_30754 [Oryza sativa Indica Group]
          Length = 1427

 Score =  385 bits (989), Expect = e-104
 Identities = 177/327 (54%), Positives = 232/327 (70%)
 Frame = -2

Query: 1147 RLLVRVSRSQNRLYKISLMIGRPLCLNMRLEDQTWKWHARLGHISFRTIKTISQNKMVRG 968
            RL++RV R+ NRLY+I L +  P+CL  R+++  W WHARLGH++F+ +K ++   M  G
Sbjct: 459  RLVMRVRRTPNRLYRIELKLATPVCLLTRMDEPAWLWHARLGHVNFQAMKLLADKGMAGG 518

Query: 967  LPQINDEAKICESCLVRKQTRQGFPKATTFRASKPLELLHADLCGPITPQTLANNKYIFV 788
            +P I    ++C++CLV KQ RQ FP    FRA +PLELLH DLCGPITP T+A N+Y  +
Sbjct: 519  IPAITHPNQLCQACLVAKQIRQPFPATANFRAEEPLELLHIDLCGPITPTTMAGNRYFML 578

Query: 787  IIDDFSRYMWSILMKEKSEAFDRFKAFRNLIEKELKEEVKMLRTDRGGEFTSLEFNKFCE 608
            I+DDFSR+MW  ++K K +A + F  F+ L E      +K LR+DRGGEF S EF + CE
Sbjct: 579  IVDDFSRWMWMFVIKTKDQALEAFTKFKPLAENTAGRRIKTLRSDRGGEFLSGEFAQLCE 638

Query: 607  SNGIKRQLTTPYTPQQNGVVERRNRTLMEMTRSSLKAMQVPNYLWGEAVRHSTYLINRIP 428
              GI+R LT PY+PQQNGVVERRNR++M M RS +K M VP   WGEAVRH+ YL+NR+P
Sbjct: 639  QAGIQRHLTAPYSPQQNGVVERRNRSVMAMARSLMKGMSVPGRFWGEAVRHAVYLLNRLP 698

Query: 427  TKALKDMTPYESLRKRKPNIDHLRVFGCKAYAKVDSATLKKLDDRSQTLVNLGIEPGSKA 248
            TKA+ D TP+E+   RKP + HLRVFGC A+AK+ +   KKLDDRS   V LG+E GSKA
Sbjct: 699  TKAMGDRTPFEAWTGRKPQLGHLRVFGCIAHAKITTPNQKKLDDRSAPYVYLGVEEGSKA 758

Query: 247  YRLFNPTTKRVIVSRDVVFDEKANWNW 167
            +RLF+P   R+ VSRDV+F+E   W W
Sbjct: 759  HRLFDPRCGRIHVSRDVIFEENVPWQW 785


>ref|NP_001060895.1| Os08g0125300 [Oryza sativa Japonica Group]
            gi|113622864|dbj|BAF22809.1| Os08g0125300 [Oryza sativa
            Japonica Group] gi|215701150|dbj|BAG92574.1| unnamed
            protein product [Oryza sativa Japonica Group]
            gi|937928733|dbj|BAT03649.1| Os08g0125300 [Oryza sativa
            Japonica Group]
          Length = 1427

 Score =  385 bits (989), Expect = e-104
 Identities = 177/327 (54%), Positives = 232/327 (70%)
 Frame = -2

Query: 1147 RLLVRVSRSQNRLYKISLMIGRPLCLNMRLEDQTWKWHARLGHISFRTIKTISQNKMVRG 968
            RL++RV R+ NRLY+I L +  P+CL  R+++  W WHARLGH++F+ +K ++   M  G
Sbjct: 459  RLVMRVRRTPNRLYRIELKLATPVCLLTRMDEPAWLWHARLGHVNFQAMKLLADKGMAGG 518

Query: 967  LPQINDEAKICESCLVRKQTRQGFPKATTFRASKPLELLHADLCGPITPQTLANNKYIFV 788
            +P I    ++C++CLV KQ RQ FP    FRA +PLELLH DLCGPITP T+A N+Y  +
Sbjct: 519  IPAITHPNQLCQACLVAKQIRQPFPATANFRAEEPLELLHIDLCGPITPTTMAGNRYFML 578

Query: 787  IIDDFSRYMWSILMKEKSEAFDRFKAFRNLIEKELKEEVKMLRTDRGGEFTSLEFNKFCE 608
            I+DDFSR+MW  ++K K +A + F  F+ L E      +K LR+DRGGEF S EF + CE
Sbjct: 579  IVDDFSRWMWMFVIKTKDQALEAFTKFKPLAENTAGRRIKTLRSDRGGEFLSGEFAQLCE 638

Query: 607  SNGIKRQLTTPYTPQQNGVVERRNRTLMEMTRSSLKAMQVPNYLWGEAVRHSTYLINRIP 428
              GI+R LT PY+PQQNGVVERRNR++M M RS +K M VP   WGEAVRH+ YL+NR+P
Sbjct: 639  QAGIQRHLTAPYSPQQNGVVERRNRSVMAMARSLMKGMSVPGRFWGEAVRHAVYLLNRLP 698

Query: 427  TKALKDMTPYESLRKRKPNIDHLRVFGCKAYAKVDSATLKKLDDRSQTLVNLGIEPGSKA 248
            TKA+ D TP+E+   RKP + HLRVFGC A+AK+ +   KKLDDRS   V LG+E GSKA
Sbjct: 699  TKAMGDRTPFEAWTGRKPQLGHLRVFGCIAHAKITTPNQKKLDDRSAPYVYLGVEEGSKA 758

Query: 247  YRLFNPTTKRVIVSRDVVFDEKANWNW 167
            +RLF+P   R+ VSRDV+F+E   W W
Sbjct: 759  HRLFDPRCGRIHVSRDVIFEENVPWQW 785


>gb|AAO72413.1| gag-pol polyprotein [Oryza sativa Japonica Group]
            gi|108710383|gb|ABF98178.1| retrotransposon protein,
            putative, unclassified [Oryza sativa Japonica Group]
          Length = 1339

 Score =  384 bits (986), Expect = e-104
 Identities = 176/327 (53%), Positives = 233/327 (71%)
 Frame = -2

Query: 1147 RLLVRVSRSQNRLYKISLMIGRPLCLNMRLEDQTWKWHARLGHISFRTIKTISQNKMVRG 968
            RL+++V RS NRLY+I L +  P+CL   L+D  W WHARLGH++F  +K +   +M  G
Sbjct: 412  RLVMKVRRSSNRLYRIELQLASPVCLLASLDDPAWLWHARLGHVNFHALKLLVDKEMAAG 471

Query: 967  LPQINDEAKICESCLVRKQTRQGFPKATTFRASKPLELLHADLCGPITPQTLANNKYIFV 788
            +P ++   ++C++CLV KQ RQ FP    + A  PLELLH DLCGPITP T   N+Y  +
Sbjct: 472  VPAVHHPNQLCQACLVAKQVRQPFPGMANYLAEAPLELLHMDLCGPITPSTFTGNRYFML 531

Query: 787  IIDDFSRYMWSILMKEKSEAFDRFKAFRNLIEKELKEEVKMLRTDRGGEFTSLEFNKFCE 608
            I+DDFS +MW  ++K K +A   F+ F+ L E      +K LRTDRGGEF S EF + C+
Sbjct: 532  IVDDFSHWMWVFVIKSKDQALAAFEKFKPLAENTAGRTIKTLRTDRGGEFLSGEFARVCD 591

Query: 607  SNGIKRQLTTPYTPQQNGVVERRNRTLMEMTRSSLKAMQVPNYLWGEAVRHSTYLINRIP 428
            + GI+R LT PY+PQQNGVVERRNRT+M M RS LK M VP  +WGEAVRH+ +L+NR+P
Sbjct: 592  AAGIERHLTVPYSPQQNGVVERRNRTVMAMARSLLKGMSVPGRMWGEAVRHAVFLLNRLP 651

Query: 427  TKALKDMTPYESLRKRKPNIDHLRVFGCKAYAKVDSATLKKLDDRSQTLVNLGIEPGSKA 248
            TKA+ + TP+E+   +KP++ HLRVFGC A+AKV +  LKKLDDRS  +V LG+E GSKA
Sbjct: 652  TKAMGNRTPFEAWTGKKPHLGHLRVFGCTAHAKVTAPHLKKLDDRSNPVVYLGVEEGSKA 711

Query: 247  YRLFNPTTKRVIVSRDVVFDEKANWNW 167
            +RLF+P  +++IVSRDVVFDE   W W
Sbjct: 712  HRLFDPRRRQIIVSRDVVFDENTPWQW 738


>emb|CAE04422.2| OSJNBb0040D15.12 [Oryza sativa Japonica Group]
          Length = 893

 Score =  374 bits (959), Expect = e-100
 Identities = 172/327 (52%), Positives = 229/327 (70%)
 Frame = -2

Query: 1147 RLLVRVSRSQNRLYKISLMIGRPLCLNMRLEDQTWKWHARLGHISFRTIKTISQNKMVRG 968
            RL+++V R+ NRLY+I L +  P+CL   L+D  W WHARLGH++F  +K +   +MV G
Sbjct: 272  RLVMKVRRTSNRLYRIELQLASPVCLLASLDDPAWLWHARLGHVNFHALKLLVDKEMVAG 331

Query: 967  LPQINDEAKICESCLVRKQTRQGFPKATTFRASKPLELLHADLCGPITPQTLANNKYIFV 788
            +P ++   ++C++CLV KQ RQ FP    +RA  PLELLH DLCGPITP T A N+Y  +
Sbjct: 332  VPAVHHPNQLCQACLVAKQVRQSFPGMANYRAEAPLELLHMDLCGPITPSTFAGNRYFML 391

Query: 787  IIDDFSRYMWSILMKEKSEAFDRFKAFRNLIEKELKEEVKMLRTDRGGEFTSLEFNKFCE 608
            I+DDFSR+MW  ++K K +A    + F+ L E      +K LRTDRG EF S EF + C+
Sbjct: 392  IVDDFSRWMWVFVIKSKDQALAASEKFKPLAENTAGRTIKTLRTDRGSEFLSGEFARVCD 451

Query: 607  SNGIKRQLTTPYTPQQNGVVERRNRTLMEMTRSSLKAMQVPNYLWGEAVRHSTYLINRIP 428
            + GI+R LT PY+PQQNGVVE RNRT+M M RS LK M VP  +WGEAVRH+ +L+NR+P
Sbjct: 452  AAGIERHLTAPYSPQQNGVVEHRNRTVMAMARSLLKGMSVPGRMWGEAVRHAVFLLNRLP 511

Query: 427  TKALKDMTPYESLRKRKPNIDHLRVFGCKAYAKVDSATLKKLDDRSQTLVNLGIEPGSKA 248
            TKA+ + T +E+   +KP++ HL VFGC A+ KV +  L KLDDRS   V LG+E GSKA
Sbjct: 512  TKAMGNRTSFEAWMGKKPHLGHLWVFGCTAHTKVTAPHLMKLDDRSNPFVYLGVEEGSKA 571

Query: 247  YRLFNPTTKRVIVSRDVVFDEKANWNW 167
            +RLF+P  +++IVSRDVVFDE   W W
Sbjct: 572  HRLFDPRRRQIIVSRDVVFDENTPWQW 598


>gb|AAF63110.1|AC006423_11 putative retroelement pol polyprotein [Arabidopsis thaliana]
          Length = 1150

 Score =  370 bits (950), Expect = 1e-99
 Identities = 183/355 (51%), Positives = 241/355 (67%)
 Frame = -2

Query: 1150 GRLLVRVSRSQNRLYKISLMIGRPLCLNMRLEDQTWKWHARLGHISFRTIKTISQNKMVR 971
            G+LLV+  RS+N LYK+ + I     L++    ++ +WHARLGH++F TIK++ Q ++V+
Sbjct: 272  GKLLVKACRSKNHLYKVRMGIKGATRLHLTTISESSRWHARLGHVNFDTIKSMMQKELVQ 331

Query: 970  GLPQINDEAKICESCLVRKQTRQGFPKATTFRASKPLELLHADLCGPITPQTLANNKYIF 791
            G    + + ++C SCL+ KQTR  FPKAT FRA+K LEL+H DLCGPITP T A N+Y+F
Sbjct: 332  GFSLGSIKKELCSSCLLGKQTRLAFPKATLFRAAKILELVHGDLCGPITPSTAAGNRYVF 391

Query: 790  VIIDDFSRYMWSILMKEKSEAFDRFKAFRNLIEKELKEEVKMLRTDRGGEFTSLEFNKFC 611
            V+IDD SRYMW+IL+KEKSEAF++F+ F++L+E+E    ++  RTDRGGEF S EFN  C
Sbjct: 392  VLIDDHSRYMWTILLKEKSEAFNKFRKFKSLVEQESGARIQTFRTDRGGEFVSQEFNNLC 451

Query: 610  ESNGIKRQLTTPYTPQQNGVVERRNRTLMEMTRSSLKAMQVPNYLWGEAVRHSTYLINRI 431
            + +GIKR LT PYTPQQNGVVERRNRTL+EMTRS +K M VPNYLWGE +RHSTYL+NRI
Sbjct: 452  QESGIKRHLTAPYTPQQNGVVERRNRTLLEMTRSIMKHMHVPNYLWGEGIRHSTYLLNRI 511

Query: 430  PTKALKDMTPYESLRKRKPNIDHLRVFGCKAYAKVDSATLKKLDDRSQTLVNLGIEPGSK 251
             T++++D TPYE+ R +KPNI+HLR+FGC  YAK                          
Sbjct: 512  ATRSVQDKTPYETFRMKKPNIEHLRIFGCIGYAK-------------------------- 545

Query: 250  AYRLFNPTTKRVIVSRDVVFDEKANWNWKETNDGPSRDPGMFHMRWGQVIDEGEG 86
                       V+VSRDVVFDE  +WNW   +   S + G F +  GQ  + G G
Sbjct: 546  -----------VVVSRDVVFDETKSWNWNHRDMEHSHN-GNFILTLGQFGNHGIG 588


>gb|ABB47537.2| retrotransposon protein, putative, unclassified [Oryza sativa
            Japonica Group]
          Length = 1172

 Score =  368 bits (945), Expect = 5e-99
 Identities = 169/327 (51%), Positives = 231/327 (70%)
 Frame = -2

Query: 1147 RLLVRVSRSQNRLYKISLMIGRPLCLNMRLEDQTWKWHARLGHISFRTIKTISQNKMVRG 968
            RL+++V R+ NRLY+I L +   +CL   L++  W WHAR+GH++F  +K +   +M  G
Sbjct: 306  RLVMKVRRTSNRLYRIELQLASQVCLLASLDNPAWLWHARIGHVNFHALKLLVDKEMASG 365

Query: 967  LPQINDEAKICESCLVRKQTRQGFPKATTFRASKPLELLHADLCGPITPQTLANNKYIFV 788
            +P ++   ++C++CLV KQ RQ FP    +RA  PLELLH DLCGPITP T A N+Y  +
Sbjct: 366  VPTVHHPNQLCQACLVAKQVRQPFPGMANYRAEAPLELLHMDLCGPITPSTFAGNRYFML 425

Query: 787  IIDDFSRYMWSILMKEKSEAFDRFKAFRNLIEKELKEEVKMLRTDRGGEFTSLEFNKFCE 608
            I+DDFS +MW  ++K K +A   F+ F+ L +  +   +K LRTDRGGEF S +F + C+
Sbjct: 426  IVDDFSNWMWVFVIKLKDQALAVFEKFKPLAKNTVGRTIKTLRTDRGGEFLSGKFARVCD 485

Query: 607  SNGIKRQLTTPYTPQQNGVVERRNRTLMEMTRSSLKAMQVPNYLWGEAVRHSTYLINRIP 428
            +  I+R LT PY+PQQN VVERRNRT+M M RS LK M VP  +WGEAVRH+ +L+N +P
Sbjct: 486  AASIERHLTAPYSPQQNDVVERRNRTVMAMARSLLKGMSVPGRMWGEAVRHAIFLLNWLP 545

Query: 427  TKALKDMTPYESLRKRKPNIDHLRVFGCKAYAKVDSATLKKLDDRSQTLVNLGIEPGSKA 248
            TKA+ + TP+E+   +KP++ HLRVFGC A+AKV +  LKKLDDRS   V LG+E GSKA
Sbjct: 546  TKAMGNRTPFEAWTGKKPHLGHLRVFGCTAHAKVTAPHLKKLDDRSNPFVYLGVEEGSKA 605

Query: 247  YRLFNPTTKRVIVSRDVVFDEKANWNW 167
            +RLF+P  +++IVSRDVVFDE   W W
Sbjct: 606  HRLFDPRRRQIIVSRDVVFDENTPWQW 632


>gb|AAD32898.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
          Length = 1307

 Score =  360 bits (924), Expect = 1e-96
 Identities = 183/354 (51%), Positives = 239/354 (67%), Gaps = 1/354 (0%)
 Frame = -2

Query: 1150 GRLLVRVSRSQNRLYKISLMIGRPLCLNMRLEDQTWKWHARLGHISFRTIKTISQNKMVR 971
            G LL+R +RS+NRLYK+ L +    CL +                      T+ + ++V 
Sbjct: 376  GCLLLRATRSRNRLYKVDLNVENVKCLQLEAA-------------------TMVRKELVI 416

Query: 970  GLPQINDEAKICESCLVRKQTRQGFPKATTFRASKPLELLHADLCGPITPQTLANNKYIF 791
            G+  I  E + C SCL+ KQ RQ FPKATT+RAS+ LEL+H DLCGPIT  T A  +YI 
Sbjct: 417  GISNIPKEKETCGSCLLGKQARQPFPKATTYRASQVLELVHGDLCGPITQSTTAKKRYIL 476

Query: 790  VIIDDFSRYMWSILMKEKSEAFDRFKAFRNLIEKELKEEVKMLRTDRGGEFTSLEFNKFC 611
            V+IDD +RYMWS+L+KEKSEAF++F+ F+  +E+E   ++K  RTD+GGEF S EF  FC
Sbjct: 477  VLIDDHTRYMWSMLLKEKSEAFEKFRDFKTKVEQESGVKIKTFRTDKGGEFVSQEFQDFC 536

Query: 610  ESNGIKRQLTTPYTPQQNGVVERRNRTLMEMTRSSLKAMQVPNYLWGEAVRHSTYLINRI 431
               GI R LT PYTPQQNGVVERRNRTL+ MTRS LK M++PNYLWGEAVRHSTY+INR+
Sbjct: 537  AKEGINRHLTAPYTPQQNGVVERRNRTLLGMTRSILKHMKMPNYLWGEAVRHSTYIINRV 596

Query: 430  PTKALKDMTPYESLRKRKPNIDHLRVFGCKAYAKVDSATLKKLDDRSQTLVNLGIEPGSK 251
             T++L++ TPYE  ++RKPN++HLRVFGC  YAK++   L+KLDDRS+ LV LG EPGSK
Sbjct: 597  GTRSLQNQTPYEVFKQRKPNVEHLRVFGCIGYAKIEGPHLRKLDDRSKMLVYLGTEPGSK 656

Query: 250  AYRLFNPTTKRVIVSRDVVFDEKANWNWKETNDGPSRD-PGMFHMRWGQVIDEG 92
            AYRL +PT +++I            WN    +D  +RD  G F +  G+  + G
Sbjct: 657  AYRLLDPTNRKII-----------KWN---NSDSETRDISGTFSLTLGEFGNNG 696


>emb|CAD41731.1| OSJNBb0034I13.10 [Oryza sativa Japonica Group]
          Length = 1425

 Score =  355 bits (911), Expect = 4e-95
 Identities = 166/340 (48%), Positives = 227/340 (66%)
 Frame = -2

Query: 1156 PSGRLLVRVSRSQNRLYKISLMIGRPLCLNMRLEDQTWKWHARLGHISFRTIKTISQNKM 977
            P+G LL +V R  N LY + L I  P+C+     D  W+WHAR GH++F++++ ++Q  M
Sbjct: 478  PNGLLLAKVKRDINYLYILKLHIANPVCMAASGGDTAWRWHARFGHLNFQSLRRLAQGNM 537

Query: 976  VRGLPQINDEAKICESCLVRKQTRQGFPKATTFRASKPLELLHADLCGPITPQTLANNKY 797
            VRGLP I+   ++C+ CL  KQ R  FP+   FRA + LEL+H DLCGPITP T    KY
Sbjct: 538  VRGLPTIDHTDQLCDGCLAGKQRRLPFPEEAKFRAQEALELVHGDLCGPITPATPGGRKY 597

Query: 796  IFVIIDDFSRYMWSILMKEKSEAFDRFKAFRNLIEKELKEEVKMLRTDRGGEFTSLEFNK 617
              +++DD SR+MW  L+  K EA    K F+  +E E   +++ LRTDRGGEFTS+EF  
Sbjct: 598  FLLLVDDMSRHMWIRLLSGKHEAATAIKQFQAGVELESGRKLRALRTDRGGEFTSVEFMD 657

Query: 616  FCESNGIKRQLTTPYTPQQNGVVERRNRTLMEMTRSSLKAMQVPNYLWGEAVRHSTYLIN 437
            +C   G++R+LT PY+PQQN VVERRN+T++   RS LKA  +P   WGEAV  + Y++N
Sbjct: 658  YCTDRGMRRELTAPYSPQQNRVVERRNQTVVAAARSMLKAAGLPARFWGEAVVAAVYVLN 717

Query: 436  RIPTKALKDMTPYESLRKRKPNIDHLRVFGCKAYAKVDSATLKKLDDRSQTLVNLGIEPG 257
            R PTKAL  +TPYE+   R+P+++HLRVFGC  Y K     L+KLDDR   +V +G E G
Sbjct: 718  RSPTKALDGVTPYEAWHGRRPSVEHLRVFGCVGYVKTVKPNLRKLDDRGTRMVFIGYEQG 777

Query: 256  SKAYRLFNPTTKRVIVSRDVVFDEKANWNWKETNDGPSRD 137
            SKAYR+++P  +RV VSRDVVFDE A W W++  D  + +
Sbjct: 778  SKAYRMYDPVAQRVCVSRDVVFDETATWAWRDPEDAATEE 817


>ref|NP_001064098.1| Os10g0130700 [Oryza sativa Japonica Group]
            gi|20514806|gb|AAM23251.1|AC092553_17 Putative pol
            polyprotein [Oryza sativa Japonica Group]
            gi|21326494|gb|AAM47622.1|AC122147_11 Putative pol
            polyprotein [Oryza sativa Japonica Group]
            gi|31430018|gb|AAP51989.1| retrotransposon protein,
            putative, Ty1-copia subclass, expressed [Oryza sativa
            Japonica Group] gi|113638707|dbj|BAF26012.1| Os10g0130700
            [Oryza sativa Japonica Group]
          Length = 1426

 Score =  353 bits (907), Expect = 1e-94
 Identities = 165/332 (49%), Positives = 225/332 (67%)
 Frame = -2

Query: 1156 PSGRLLVRVSRSQNRLYKISLMIGRPLCLNMRLEDQTWKWHARLGHISFRTIKTISQNKM 977
            P G LL +V R  N LY + L I  P+C+     D  W+WHAR GH++F++++ ++Q  M
Sbjct: 478  PDGLLLAKVKRDINYLYILKLHIANPVCMAASGGDMAWRWHARFGHLNFQSLRRLAQGNM 537

Query: 976  VRGLPQINDEAKICESCLVRKQTRQGFPKATTFRASKPLELLHADLCGPITPQTLANNKY 797
            VRGLP I+   ++C+ CL  KQ R  FP+   FRA + LEL+H DLCGPITP T    KY
Sbjct: 538  VRGLPIIDHTDQLCDGCLAGKQRRLPFPEEAKFRAQEALELVHGDLCGPITPATPGGRKY 597

Query: 796  IFVIIDDFSRYMWSILMKEKSEAFDRFKAFRNLIEKELKEEVKMLRTDRGGEFTSLEFNK 617
              +++DD SR+MW  L+  K EA    K F+  +E E   +++ LRTDRGGEFTS+EF  
Sbjct: 598  FLLLVDDMSRHMWIRLLSGKHEAATAIKQFQVGVELESGRKLRALRTDRGGEFTSVEFMD 657

Query: 616  FCESNGIKRQLTTPYTPQQNGVVERRNRTLMEMTRSSLKAMQVPNYLWGEAVRHSTYLIN 437
            +C  +G++R+LT PY+PQQNGVVERRN+T++   RS LKA  +P   WGEAV  + Y++N
Sbjct: 658  YCADHGMRRELTAPYSPQQNGVVERRNQTVVAAARSMLKAAGMPACFWGEAVVAAVYVLN 717

Query: 436  RIPTKALKDMTPYESLRKRKPNIDHLRVFGCKAYAKVDSATLKKLDDRSQTLVNLGIEPG 257
            R PTKAL  +TP+E+   R+P+++HLRVFGC  Y K     L+KLDDR   +V +G E G
Sbjct: 718  RSPTKALNGVTPHEAWHGRRPSVEHLRVFGCVGYVKTVKPNLRKLDDRGTRMVFIGYEQG 777

Query: 256  SKAYRLFNPTTKRVIVSRDVVFDEKANWNWKE 161
            SKAYR+++P  +RV VSRDVVFDE A W W++
Sbjct: 778  SKAYRMYDPVARRVCVSRDVVFDEAATWAWRD 809


>dbj|BAG94704.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 1094

 Score =  353 bits (905), Expect = 2e-94
 Identities = 166/332 (50%), Positives = 222/332 (66%)
 Frame = -2

Query: 1156 PSGRLLVRVSRSQNRLYKISLMIGRPLCLNMRLEDQTWKWHARLGHISFRTIKTISQNKM 977
            P G LL +V RS + LY + L + RP+CL     +  W+WHAR GH++F+ ++ ++Q +M
Sbjct: 141  PDGLLLAKVKRSPSFLYILKLNMARPICLAANGTETAWRWHARFGHLNFQALRRLAQAEM 200

Query: 976  VRGLPQINDEAKICESCLVRKQTRQGFPKATTFRASKPLELLHADLCGPITPQTLANNKY 797
            VRGLP I+   ++C+ CL  KQ R  FP    FRA   LEL+H DLCGPI P T    KY
Sbjct: 201  VRGLPVIDHVDQLCDGCLAGKQRRVPFPDKARFRAQDALELVHGDLCGPIAPATPGGRKY 260

Query: 796  IFVIIDDFSRYMWSILMKEKSEAFDRFKAFRNLIEKELKEEVKMLRTDRGGEFTSLEFNK 617
              +++DD SR+MW  L+  K EA    K F+  +E E   +++ LRTDRGGEFTS+EF +
Sbjct: 261  FLLLVDDMSRFMWIRLLSGKHEAAAAIKQFKAGVEMESGRKLRALRTDRGGEFTSVEFTE 320

Query: 616  FCESNGIKRQLTTPYTPQQNGVVERRNRTLMEMTRSSLKAMQVPNYLWGEAVRHSTYLIN 437
            FC   G+ RQLT PY+PQQNGVVERRN T++   RS LKA  +P   WGEAV  + YL N
Sbjct: 321  FCADRGVSRQLTAPYSPQQNGVVERRNLTVVAAARSMLKAAGMPAQFWGEAVMAAVYLWN 380

Query: 436  RIPTKALKDMTPYESLRKRKPNIDHLRVFGCKAYAKVDSATLKKLDDRSQTLVNLGIEPG 257
            R PTK+L  +TPYE+   R+P+++HL+VFGC  Y K     L+KLDDR   +V +G E G
Sbjct: 381  RSPTKSLDGVTPYEAWHGRRPSVEHLKVFGCVGYVKTVKPNLRKLDDRGTRMVFIGYEQG 440

Query: 256  SKAYRLFNPTTKRVIVSRDVVFDEKANWNWKE 161
            SKAYR+++P ++RV VSRDVVFDE A W W++
Sbjct: 441  SKAYRMYDPVSRRVYVSRDVVFDEAAMWPWRD 472


>ref|NP_001059837.1| Os07g0528100, partial [Oryza sativa Japonica Group]
            gi|113611373|dbj|BAF21751.1| Os07g0528100, partial [Oryza
            sativa Japonica Group]
          Length = 1187

 Score =  353 bits (905), Expect = 2e-94
 Identities = 166/332 (50%), Positives = 222/332 (66%)
 Frame = -2

Query: 1156 PSGRLLVRVSRSQNRLYKISLMIGRPLCLNMRLEDQTWKWHARLGHISFRTIKTISQNKM 977
            P G LL +V RS + LY + L + RP+CL     +  W+WHAR GH++F+ ++ ++Q +M
Sbjct: 234  PDGLLLAKVKRSPSFLYILKLNMARPICLAANGTETAWRWHARFGHLNFQALRRLAQAEM 293

Query: 976  VRGLPQINDEAKICESCLVRKQTRQGFPKATTFRASKPLELLHADLCGPITPQTLANNKY 797
            VRGLP I+   ++C+ CL  KQ R  FP    FRA   LEL+H DLCGPI P T    KY
Sbjct: 294  VRGLPVIDHVDQLCDGCLAGKQRRVPFPDKARFRAQDALELVHGDLCGPIAPATPGGRKY 353

Query: 796  IFVIIDDFSRYMWSILMKEKSEAFDRFKAFRNLIEKELKEEVKMLRTDRGGEFTSLEFNK 617
              +++DD SR+MW  L+  K EA    K F+  +E E   +++ LRTDRGGEFTS+EF +
Sbjct: 354  FLLLVDDMSRFMWIRLLSGKHEAAAAIKQFKAGVEMESGRKLRALRTDRGGEFTSVEFTE 413

Query: 616  FCESNGIKRQLTTPYTPQQNGVVERRNRTLMEMTRSSLKAMQVPNYLWGEAVRHSTYLIN 437
            FC   G+ RQLT PY+PQQNGVVERRN T++   RS LKA  +P   WGEAV  + YL N
Sbjct: 414  FCADRGVSRQLTAPYSPQQNGVVERRNLTVVAAARSMLKAAGMPAQFWGEAVMAAVYLWN 473

Query: 436  RIPTKALKDMTPYESLRKRKPNIDHLRVFGCKAYAKVDSATLKKLDDRSQTLVNLGIEPG 257
            R PTK+L  +TPYE+   R+P+++HL+VFGC  Y K     L+KLDDR   +V +G E G
Sbjct: 474  RSPTKSLDGVTPYEAWHGRRPSVEHLKVFGCVGYVKTVKPNLRKLDDRGTRMVFIGYEQG 533

Query: 256  SKAYRLFNPTTKRVIVSRDVVFDEKANWNWKE 161
            SKAYR+++P ++RV VSRDVVFDE A W W++
Sbjct: 534  SKAYRMYDPVSRRVYVSRDVVFDEAAMWPWRD 565


>gb|AAZ66952.1| 117M18_33 [Brassica rapa]
          Length = 681

 Score =  352 bits (904), Expect = 3e-94
 Identities = 166/291 (57%), Positives = 219/291 (75%)
 Frame = -2

Query: 1153 SGRLLVRVSRSQNRLYKISLMIGRPLCLNMRLEDQTWKWHARLGHISFRTIKTISQNKMV 974
            +G L+++ +R++NRLYK+ L      CL + L  ++ +WHARLGH++  T+K +   ++V
Sbjct: 392  TGHLMIQTTRAKNRLYKVVLQADIH-CLQISLGSESSRWHARLGHVNTDTMKVMINKQLV 450

Query: 973  RGLPQINDEAKICESCLVRKQTRQGFPKATTFRASKPLELLHADLCGPITPQTLANNKYI 794
             G+P+I    + C SCL  KQ RQ FP++T +RAS PLEL+H DLCGPITP T    +Y+
Sbjct: 451  TGMPEIAVTKETCVSCLRGKQVRQPFPQSTAYRASCPLELVHGDLCGPITPSTPGQKRYV 510

Query: 793  FVIIDDFSRYMWSILMKEKSEAFDRFKAFRNLIEKELKEEVKMLRTDRGGEFTSLEFNKF 614
            FV+IDD+SRYMW++L+++KSEA D+FK FR + E+E K  +K  RTDRGGEFTS +F  F
Sbjct: 511  FVLIDDYSRYMWTVLLEKKSEALDKFKRFRTVAEQETKMVLKTFRTDRGGEFTSHDFASF 570

Query: 613  CESNGIKRQLTTPYTPQQNGVVERRNRTLMEMTRSSLKAMQVPNYLWGEAVRHSTYLINR 434
            CE +GI R LT PY+PQQNGVVERRNRTL+EMTRS LK   VPN LWGEA RH+TYLINR
Sbjct: 571  CEKHGINRHLTAPYSPQQNGVVERRNRTLLEMTRSILKHKNVPNVLWGEATRHATYLINR 630

Query: 433  IPTKALKDMTPYESLRKRKPNIDHLRVFGCKAYAKVDSATLKKLDDRSQTL 281
            I T++L+ MTPYE LR +KPN+ HLR+FGC  YA+ ++A  KKLDDRS+ L
Sbjct: 631  IGTRSLEGMTPYECLRGKKPNLQHLRIFGCVCYARTEAAGRKKLDDRSRIL 681


>gb|ACN78973.1| copia-type polyprotein [Glycine max] gi|225016157|gb|ACN78980.1|
            copia-type polyprotein [Glycine max]
          Length = 1042

 Score =  352 bits (903), Expect = 3e-94
 Identities = 164/334 (49%), Positives = 223/334 (66%)
 Frame = -2

Query: 1153 SGRLLVRVSRSQNRLYKISLMIGRPLCLNMRLEDQTWKWHARLGHISFRTIKTISQNKMV 974
            +  L+ +V  S+NR++ +++      CL   ++D++W WH R GH++F  +K++ + KMV
Sbjct: 121  NSNLIAKVFMSRNRMFTLNIKTNEAKCLKASIKDESWCWHMRFGHLNFGALKSLGEEKMV 180

Query: 973  RGLPQINDEAKICESCLVRKQTRQGFPKATTFRASKPLELLHADLCGPITPQTLANNKYI 794
            +G+PQIN   ++CE+CL+ K  R+ FPK    RA +PL+L++ D+CGPI P +  NNKY 
Sbjct: 181  KGMPQINHPNQLCEACLLGKHARRSFPKEANSRAKEPLQLVYTDVCGPINPPSCGNNKYF 240

Query: 793  FVIIDDFSRYMWSILMKEKSEAFDRFKAFRNLIEKELKEEVKMLRTDRGGEFTSLEFNKF 614
             + IDD+SR  W   +K+KSEAF  FK F+ L+EKE    +K LR+DRGGEFTS EFN+F
Sbjct: 241  LLFIDDYSRKTWVYFLKQKSEAFVAFKNFKALVEKESGYVIKALRSDRGGEFTSKEFNEF 300

Query: 613  CESNGIKRQLTTPYTPQQNGVVERRNRTLMEMTRSSLKAMQVPNYLWGEAVRHSTYLINR 434
            CE  GI+R LT P +PQQNGV ER+NRT++ MTR  LKA  +P   W EAV  + YL NR
Sbjct: 301  CEKYGIRRPLTVPRSPQQNGVAERKNRTILNMTRCMLKAKNMPKEFWAEAVACAVYLSNR 360

Query: 433  IPTKALKDMTPYESLRKRKPNIDHLRVFGCKAYAKVDSATLKKLDDRSQTLVNLGIEPGS 254
             PTK +KD TP E+    KP +DHLRVFG  AYA V      KLDDRS+  V +G +  S
Sbjct: 361  SPTKNVKDQTPQEAWSGVKPRVDHLRVFGSIAYAHVPDQGRFKLDDRSEKHVFIGYDASS 420

Query: 253  KAYRLFNPTTKRVIVSRDVVFDEKANWNWKETND 152
            K Y+L+NP   + IVSRDV F E+  WNW+E  D
Sbjct: 421  KGYKLYNPNNGKTIVSRDVEFYEEGTWNWEEKED 454


>emb|CAH66352.1| OSIGBa0135C09.3 [Oryza sativa Indica Group]
          Length = 1366

 Score =  352 bits (903), Expect = 3e-94
 Identities = 172/343 (50%), Positives = 232/343 (67%), Gaps = 2/343 (0%)
 Frame = -2

Query: 1156 PSGRLLVRVSRSQNRLYKISLMIGRPLCLNMRLEDQTWKWHARLGHISFRTIKTISQNKM 977
            P G LLVRV RS + LY I L I RP+ L  R     W+WHAR GH++F +++ ++Q +M
Sbjct: 422  PRGHLLVRVRRSDDCLYTIKLNIDRPVYLAARSAKPAWRWHARYGHLNFPSLRKLAQQEM 481

Query: 976  VRGLPQINDEAKICESCLVRKQTRQGFPKATTFRASKPLELLHADLCGPITPQTLANNKY 797
            VRGLP +    ++C+ CL+ KQ R  FP  + +RA + LEL+H DLCGPI P T A N+Y
Sbjct: 482  VRGLPLLQQVTQVCDGCLLGKQRRAAFPTQSKYRADEHLELVHGDLCGPIEPATPAGNRY 541

Query: 796  IFVIIDDFSRYMWSILMKEKSEAFDRFKAFRNLIEKELKEEVKMLRTDRGGEFTSLEFNK 617
              +++DD SRYMW  L++ K EA +  K F+   E E   +++ LRTDRGGEFTS+EF +
Sbjct: 542  FLLLVDDMSRYMWLTLIRSKDEAANAIKHFQAHAEVESGRKLRALRTDRGGEFTSIEFGE 601

Query: 616  FCESNGIKRQLTTPYTPQQNGVVERRNRTLMEMTRSSLKAMQVPNYLWGEAVRHSTYLIN 437
            +C +  + RQLT PY+PQQNGVVERRN+T++   RS +KA  VP   WGEA+  + +L+N
Sbjct: 602  YCANLRVGRQLTAPYSPQQNGVVERRNQTIVATARSMMKAKGVPGRFWGEAMSTAVFLLN 661

Query: 436  RIPTKALKDMTPYESLRKRKPNIDHLRVFGCKAYAKVDSATLKKLDDRSQTLVNLGIEPG 257
            R PTK+L + TPYE+   ++P +  LR FGC  + K+    LKKLDDRS  +V LG E G
Sbjct: 662  RSPTKSLDNQTPYEAWYGQRPAVHFLRTFGCVGHVKITKPGLKKLDDRSAPMVLLGYEQG 721

Query: 256  SKAYRLFNPTTKRVIVSRDVVFDEKANWNWKE-TNDG-PSRDP 134
            SKAYRL++P ++RV VSRDVVFDE A W+W   T DG P  +P
Sbjct: 722  SKAYRLYDPVSERVHVSRDVVFDEDAAWDWGPLTPDGAPQLEP 764


>gb|AAU90089.1| putative polyprotein [Oryza sativa Japonica Group]
          Length = 1094

 Score =  352 bits (903), Expect = 3e-94
 Identities = 165/332 (49%), Positives = 222/332 (66%)
 Frame = -2

Query: 1156 PSGRLLVRVSRSQNRLYKISLMIGRPLCLNMRLEDQTWKWHARLGHISFRTIKTISQNKM 977
            P G LL +V RS + LY + L + RP+CL     +  W+WHAR GH++F+ ++ ++Q +M
Sbjct: 141  PDGLLLAKVKRSPSFLYILKLNMARPICLAANGTETAWRWHARFGHLNFQALRRLAQAEM 200

Query: 976  VRGLPQINDEAKICESCLVRKQTRQGFPKATTFRASKPLELLHADLCGPITPQTLANNKY 797
            VRGLP I+   ++C+ CL  KQ R  FP    FRA   LEL+H DLCGPI P T    KY
Sbjct: 201  VRGLPVIDHVDQLCDGCLAGKQRRVPFPDKARFRAQDALELVHGDLCGPIAPATPGGRKY 260

Query: 796  IFVIIDDFSRYMWSILMKEKSEAFDRFKAFRNLIEKELKEEVKMLRTDRGGEFTSLEFNK 617
              +++DD SR+MW  L+  K EA    K F+  +E E   +++ LRTDRGGEFTS+EF +
Sbjct: 261  FLLLVDDMSRFMWIRLLSGKHEAAAAIKQFKAGVEMESGRKLRALRTDRGGEFTSVEFTE 320

Query: 616  FCESNGIKRQLTTPYTPQQNGVVERRNRTLMEMTRSSLKAMQVPNYLWGEAVRHSTYLIN 437
            FC   G+ RQLT PY+PQQNGVVERRN T++   RS LKA  +P   WGEAV  + YL+N
Sbjct: 321  FCADRGVSRQLTAPYSPQQNGVVERRNLTVVAAARSMLKAAGMPAQFWGEAVVAAVYLLN 380

Query: 436  RIPTKALKDMTPYESLRKRKPNIDHLRVFGCKAYAKVDSATLKKLDDRSQTLVNLGIEPG 257
            R PTK+L  +TPYE+   R+P+++HL+VFGC  Y K     L+KLDDR   +V +G E G
Sbjct: 381  RSPTKSLDGVTPYEAWHGRRPSVEHLKVFGCVGYVKTVKPNLRKLDDRGTRMVFIGYEQG 440

Query: 256  SKAYRLFNPTTKRVIVSRDVVFDEKANWNWKE 161
            SKAYR+++P ++R  VSRDVVFDE A W W++
Sbjct: 441  SKAYRMYDPVSRRFYVSRDVVFDEAAMWPWRD 472


>emb|CAE03692.2| OSJNBb0026E15.10 [Oryza sativa Japonica Group]
          Length = 1449

 Score =  351 bits (900), Expect = 7e-94
 Identities = 170/343 (49%), Positives = 230/343 (67%), Gaps = 2/343 (0%)
 Frame = -2

Query: 1156 PSGRLLVRVSRSQNRLYKISLMIGRPLCLNMRLEDQTWKWHARLGHISFRTIKTISQNKM 977
            P G LLVRV RS + LY I L I RP+CL  R  +  W+WHAR GH++F  ++ ++Q +M
Sbjct: 489  PRGHLLVRVRRSDDCLYTIKLDIDRPVCLAARSAEPAWRWHARYGHLNFPALRKLAQQEM 548

Query: 976  VRGLPQINDEAKICESCLVRKQTRQGFPKATTFRASKPLELLHADLCGPITPQTLANNKY 797
            VRGLP +    ++C+ CL+ KQ R  FP  + +RA + LEL+H DLCGPI P T A N+Y
Sbjct: 549  VRGLPLLQQVTQVCDGCLLGKQRRAAFPTQSKYRADEHLELVHGDLCGPIEPATPAGNRY 608

Query: 796  IFVIIDDFSRYMWSILMKEKSEAFDRFKAFRNLIEKELKEEVKMLRTDRGGEFTSLEFNK 617
              +++DD SRYMW  +++ K EA +  K F+   E E   +++ LR DRG EFTS+EF +
Sbjct: 609  FLLLVDDMSRYMWLTMIRSKDEAANAIKHFQARAEVESGRKLRALRMDRGSEFTSIEFGE 668

Query: 616  FCESNGIKRQLTTPYTPQQNGVVERRNRTLMEMTRSSLKAMQVPNYLWGEAVRHSTYLIN 437
            +C + G+ RQLT PY+PQQNGVVERRN+T++   RS +KA  VP   WGEA+  + +L+N
Sbjct: 669  YCANLGVGRQLTAPYSPQQNGVVERRNQTIVATARSMMKAKGVPGRFWGEAMSTAVFLLN 728

Query: 436  RIPTKALKDMTPYESLRKRKPNIDHLRVFGCKAYAKVDSATLKKLDDRSQTLVNLGIEPG 257
            R PTK+L + TPYE+   + P +  LR FGC  + K+    LKKLDDRS  +V LG E G
Sbjct: 729  RSPTKSLDNQTPYEAWYGQWPAVHFLRTFGCVGHVKITKPGLKKLDDRSAPMVLLGYEQG 788

Query: 256  SKAYRLFNPTTKRVIVSRDVVFDEKANWNW-KETNDG-PSRDP 134
            SKAYRL++P ++RV VSRDVVFDE   W+W   T DG P  +P
Sbjct: 789  SKAYRLYDPVSERVHVSRDVVFDEDIAWDWGPVTPDGAPQLEP 831